Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,705,521 |
C→T |
V193V (GTC→GTT) |
b1629 → |
putative membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,705,521 | 0 | C | T | 100.0%
| 749.7
/ NA
| 206 | V193V (GTC→GTT) | b1629 | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (97/109); total (97/109) |
Only 100 of 211 total aligned reads displayed.
TAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT > NC_000913/1705431‑1705610
|
aaaGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGt < 2:1141103/92‑1 (MQ=255)
aGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTag < 2:5187821/93‑1 (MQ=255)
gATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTaga > 1:5061607/1‑93 (MQ=255)
aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag < 2:636009/93‑1 (MQ=255)
ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAgg > 2:153047/1‑93 (MQ=255)
gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt > 1:4514591/1‑93 (MQ=255)
gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt > 1:3590696/1‑93 (MQ=255)
gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt > 2:529823/1‑93 (MQ=255)
aaaCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTa < 2:3385723/93‑1 (MQ=255)
aaaCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGCAGAGGGTa > 2:2004180/1‑93 (MQ=255)
aCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTAtt < 1:193530/93‑1 (MQ=255)
cGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTc < 1:4981245/93‑1 (MQ=255)
cGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTc > 1:2271036/1‑93 (MQ=255)
gTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCg > 2:2444896/1‑93 (MQ=255)
tGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGGAGAGGGTATTCGCa > 2:4158933/1‑93 (MQ=255)
aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt > 2:744318/1‑93 (MQ=255)
aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt < 1:3467280/93‑1 (MQ=255)
ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTc > 1:314994/1‑93 (MQ=255)
ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTc < 1:2494198/93‑1 (MQ=255)
tgtCAATGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTATAGAGGGTATTCGCATTCt < 2:4369287/91‑1 (MQ=255)
tATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCt > 2:4234974/1‑93 (MQ=255)
aTCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCtt > 2:1734020/1‑93 (MQ=255)
cAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgc < 1:4186926/93‑1 (MQ=255)
aaCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTgcg > 2:4740001/1‑93 (MQ=255)
aCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcgc > 1:2623962/1‑93 (MQ=255)
ggCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCatat > 1:1154308/1‑93 (MQ=255)
gCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGGGGATAtt > 1:3999242/1‑93 (MQ=255)
gCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATAtt > 2:600005/1‑93 (MQ=255)
gCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATAtt > 2:4678744/1‑93 (MQ=255)
gCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATAtt < 2:257307/93‑1 (MQ=255)
cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc > 2:2990791/1‑93 (MQ=255)
cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc < 2:4970185/93‑1 (MQ=255)
cTGAGTGCGAGCCGCACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc < 2:5253081/93‑1 (MQ=255)
tGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCt < 2:3890265/93‑1 (MQ=255)
tGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCt < 2:2696476/93‑1 (MQ=255)
gAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTg > 2:1077588/1‑93 (MQ=255)
ggTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGc < 1:5267275/92‑1 (MQ=255)
aGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGc < 2:5894189/93‑1 (MQ=255)
aGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGc > 1:3210658/1‑93 (MQ=255)
gTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCa < 2:5111396/93‑1 (MQ=255)
gTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCa > 2:6013875/1‑93 (MQ=255)
cGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGcc < 2:3189212/93‑1 (MQ=255)
gAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCa > 1:5411460/1‑93 (MQ=255)
gAGCCGTACATTACCGCCGAAGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCa > 2:6064342/1‑93 (MQ=255)
aGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAc > 1:1081273/1‑93 (MQ=255)
gCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcg > 2:898504/1‑93 (MQ=255)
ccGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCCGGCTGTAGCGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgc > 2:2294981/1‑93 (MQ=255)
ccGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgc < 1:2661933/93‑1 (MQ=255)
ccGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgc < 1:65562/93‑1 (MQ=255)
cGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgcg > 1:1759935/1‑93 (MQ=255)
cGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgcg > 2:2119869/1‑93 (MQ=255)
cGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGAGGCTCAGGATGTAGAGGGGATTCGCATTCTTGCACATATTCTGCAGCCAcgcg > 2:2836359/1‑93 (MQ=255)
gTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGa > 1:873159/1‑93 (MQ=255)
tACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGaa > 1:2099382/1‑93 (MQ=255)
aCATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGAATTATTGCGCATATTCTGCAGCCACGCGaat > 1:4137769/1‑92 (MQ=255)
aTTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAAtt > 2:1810999/1‑93 (MQ=255)
aCCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCtt < 2:3408476/93‑1 (MQ=255)
ccgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTa > 1:4712167/1‑93 (MQ=255)
cgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTAt < 2:5425991/93‑1 (MQ=255)
cgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTAt < 1:798113/93‑1 (MQ=255)
cgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTAt > 2:2494618/1‑93 (MQ=255)
cccgATGACCGTTTGATGCAGGATTGCGCGGGTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc < 1:1406336/92‑1 (MQ=255)
ccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCg > 1:1494599/1‑93 (MQ=255)
ccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCg > 1:1527144/1‑93 (MQ=255)
cgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCgg > 1:2817994/1‑93 (MQ=255)
cgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCgg > 1:2684895/1‑93 (MQ=255)
cgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCgg > 2:3740567/1‑93 (MQ=255)
gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc < 1:725958/93‑1 (MQ=255)
gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc < 1:4319013/93‑1 (MQ=255)
gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc > 1:5101554/1‑93 (MQ=255)
aTGACCGTTTGATGCAGGATTGCGCGTCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCa < 2:1912553/93‑1 (MQ=255)
tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt > 1:4640367/1‑93 (MQ=255)
gACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAtt > 2:2020292/1‑93 (MQ=255)
cGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTg < 1:4101774/91‑1 (MQ=255)
tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa < 1:3514624/93‑1 (MQ=255)
ttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGAt < 1:156907/93‑1 (MQ=255)
tGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATa > 2:6180393/1‑93 (MQ=255)
gATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATaa > 2:3599869/1‑93 (MQ=255)
aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc < 1:3747985/93‑1 (MQ=255)
aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc < 1:4931898/93‑1 (MQ=255)
aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc < 2:1949625/93‑1 (MQ=255)
tGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACa < 1:5731096/93‑1 (MQ=255)
gCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACaa > 1:558330/1‑93 (MQ=255)
cAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACaaa < 1:2410299/93‑1 (MQ=255)
aGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAc < 1:200383/93‑1 (MQ=255)
ggATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAcc < 1:2041953/93‑1 (MQ=255)
aTTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGc > 2:2179363/1‑93 (MQ=255)
ttGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCa < 1:604143/93‑1 (MQ=255)
tGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAg < 1:1430968/93‑1 (MQ=255)
tGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAg < 2:1561391/93‑1 (MQ=255)
tGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAg < 2:5625030/93‑1 (MQ=255)
gcgcGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAgg < 2:950796/93‑1 (MQ=255)
gcgcGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAgg > 1:2558211/1‑93 (MQ=255)
gcgcGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAgg < 1:5963352/93‑1 (MQ=255)
gcgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCg > 1:713255/1‑93 (MQ=255)
cgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGa > 1:276680/1‑93 (MQ=255)
gCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAtt < 1:3288042/93‑1 (MQ=255)
gCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAtt < 1:5665114/93‑1 (MQ=255)
tCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTc < 1:420916/93‑1 (MQ=255)
ggTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAt > 2:1718392/1‑93 (MQ=255)
|
TAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT > NC_000913/1705431‑1705610
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATGCTG > NC_000913/1705428‑1705614
|
AGATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTT > SRR4302533.2758008/1‑94 (MQ=60)
GATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTG < SRR4302533.4775729/94‑1 (MQ=60)
GATAAGATGGAAACGTTGATTATCAGCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTG < SRR4302533.101310/94‑1 (MQ=60)
AGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGA > SRR4302533.5092193/1‑94 (MQ=60)
AGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGA < SRR4302533.4388503/94‑1 (MQ=60)
GATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAG < SRR4302533.2759756/94‑1 (MQ=60)
TGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGT > SRR4302533.3612799/1‑94 (MQ=60)
TGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGT > SRR4302533.4541928/1‑94 (MQ=60)
TGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGT < SRR4302533.7318/94‑1 (MQ=60)
ACCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATT < SRR4302533.4123738/94‑1 (MQ=60)
AACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATT > SRR4302533.1571225/1‑94 (MQ=60)
ATGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTC < SRR4302533.687979/94‑1 (MQ=60)
ACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTC > SRR4302533.2285088/1‑94 (MQ=60)
ACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTC < SRR4302533.194750/94‑1 (MQ=60)
CGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCG < SRR4302533.5011443/94‑1 (MQ=60)
TGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAT < SRR4302533.3486490/94‑1 (MQ=60)
GATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATT < SRR4302533.769670/94‑1 (MQ=60)
ATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTC < SRR4302533.3488680/94‑1 (MQ=60)
ATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTC < SRR4302533.4748920/94‑1 (MQ=60)
ATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTC > SRR4302533.316917/1‑94 (MQ=60)
TTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCT < SRR4302533.6090478/94‑1 (MQ=60)
TTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCT > SRR4302533.2830582/1‑94 (MQ=60)
TTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCT > SRR4302533.4620620/1‑94 (MQ=60)
TTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCT < SRR4302533.2509585/94‑1 (MQ=60)
TATCACCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTT < SRR4302533.2545840/94‑1 (MQ=60)
TATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTT < SRR4302533.5984276/94‑1 (MQ=60)
TATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTT > SRR4302533.223355/1‑94 (MQ=60)
TCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGC > SRR4302533.5718261/1‑94 (MQ=60)
TCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGC < SRR4302533.5445812/94‑1 (MQ=60)
CAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCG < SRR4302533.5639560/94‑1 (MQ=60)
CAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCG < SRR4302533.4212280/94‑1 (MQ=60)
AACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGC > SRR4302533.2640067/1‑94 (MQ=60)
CGCGGCGGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCAT < SRR4302533.3698517/94‑1 (MQ=60)
CGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATAT > SRR4302533.1161226/1‑94 (MQ=60)
GGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGGGGATATT > SRR4302533.4023592/1‑94 (MQ=60)
GGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCCAATATT > SRR4302533.4988509/1‑94 (MQ=60)
CTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCT > SRR4302533.2384359/1‑94 (MQ=60)
TGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTG > SRR4302533.2034989/1‑94 (MQ=60)
GAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGC > SRR4302533.2608360/1‑94 (MQ=60)
GAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGC > SRR4302533.3230433/1‑94 (MQ=60)
GGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCA < SRR4302533.5298878/94‑1 (MQ=60)
GTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAG < SRR4302533.1135940/94‑1 (MQ=60)
TGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGC > SRR4302533.2934407/1‑94 (MQ=60)
GCGAGCGGTACAGTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCC < SRR4302533.1529140/94‑1 (MQ=60)
GCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCC < SRR4302533.5103766/94‑1 (MQ=60)
CGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCA > SRR4302533.5443996/1‑94 (MQ=60)
GAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAC > SRR4302533.1087653/1‑94 (MQ=60)
CCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCG > SRR4302533.1770661/1‑94 (MQ=60)
CCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCG < SRR4302533.65986/94‑1 (MQ=60)
CCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCG < SRR4302533.2678276/94‑1 (MQ=60)
CCGTACATTACCGCCGATGACCGCTTGATGCAGGATAACGCGGCTCAGGTTCTAGAGGGCACTCTCATTCTTGCGCCTATTCcccaccaccgcg > SRR4302533.660985/1‑82 (MQ=32)
CGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGA > SRR4302533.4165850/1‑94 (MQ=60)
CGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGA > SRR4302533.878287/1‑94 (MQ=60)
GTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAA > SRR4302533.2112334/1‑94 (MQ=60)
TACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAA > SRR4302533.5027846/1‑94 (MQ=60)
TACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGAATTATTGCGCATATTCTGCAGCCACGCGAAT > SRR4302533.4162873/1‑94 (MQ=60)
CATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATT > SRR4302533.1828854/1‑94 (MQ=60)
ATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTC > SRR4302533.3881942/1‑94 (MQ=60)
TTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCT < SRR4302533.1962575/94‑1 (MQ=60)
TTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCT > SRR4302533.604850/1‑94 (MQ=60)
ACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTA > SRR4302533.4740727/1‑94 (MQ=60)
CGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATC < SRR4302533.4218371/94‑1 (MQ=60)
CGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATC < SRR4302533.4911789/94‑1 (MQ=60)
CGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATC < SRR4302533.277557/94‑1 (MQ=60)
CGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATC < SRR4302533.802808/94‑1 (MQ=60)
GCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCG < SRR4302533.1418601/94‑1 (MQ=60)
GCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCG > SRR4302533.1536337/1‑94 (MQ=60)
GCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCG > SRR4302533.1503606/1‑94 (MQ=60)
CCCGATGACCGTTTGATGCAGGATTGCGCGGGTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCG < SRR4302533.1414841/94‑1 (MQ=60)
CCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGG > SRR4302533.2835338/1‑94 (MQ=60)
CCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGG > SRR4302533.2701347/1‑94 (MQ=60)
CCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGG > SRR4302533.577595/1‑94 (MQ=60)
CGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGC > SRR4302533.5132368/1‑94 (MQ=60)
CGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGC > SRR4302533.2021934/1‑94 (MQ=60)
GATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCA < SRR4302533.730247/94‑1 (MQ=60)
GATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCA < SRR4302533.4345027/94‑1 (MQ=60)
GATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCA > SRR4302533.3226673/1‑94 (MQ=60)
GATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCA < SRR4302533.209940/94‑1 (MQ=60)
ATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAT > SRR4302533.4668483/1‑94 (MQ=60)
TGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATT > SRR4302533.3996679/1‑94 (MQ=60)
TGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATT > SRR4302533.2468638/1‑94 (MQ=60)
GACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTG > SRR4302533.144597/1‑94 (MQ=60)
TCCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGA < SRR4302533.4126733/94‑1 (MQ=60)
TTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGAT < SRR4302533.3536289/94‑1 (MQ=60)
TTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATA < SRR4302533.157907/94‑1 (MQ=60)
TGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAA < SRR4302533.2660677/94‑1 (MQ=60)
GATGCAGGATTGCGCGGCTCAGGTTGTAGAGTGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAC < SRR4302533.532443/94‑1 (MQ=60)
GATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAC < SRR4302533.1711763/94‑1 (MQ=60)
ATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACA < SRR4302533.972835/94‑1 (MQ=60)
ATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACA < SRR4302533.4961764/94‑1 (MQ=60)
ATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACA < SRR4302533.3770962/94‑1 (MQ=60)
TGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAA > SRR4302533.561646/1‑94 (MQ=60)
TGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAA > SRR4302533.1281775/1‑94 (MQ=60)
TGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAA < SRR4302533.5765698/94‑1 (MQ=60)
CAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAC > SRR4302533.5144747/1‑94 (MQ=60)
CAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAC < SRR4302533.4709134/94‑1 (MQ=60)
CAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAC < SRR4302533.2425185/94‑1 (MQ=60)
AGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACC < SRR4302533.201653/94‑1 (MQ=60)
GGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCG < SRR4302533.2054538/94‑1 (MQ=60)
TTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAG < SRR4302533.607691/94‑1 (MQ=60)
TGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGG < SRR4302533.2682076/94‑1 (MQ=60)
TGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGG > SRR4302533.2573941/1‑94 (MQ=60)
TGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGG < SRR4302533.1439617/94‑1 (MQ=60)
TGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGG < SRR4302533.867333/94‑1 (MQ=60)
GCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGC < SRR4302533.5999428/94‑1 (MQ=60)
CGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCG > SRR4302533.4151054/1‑94 (MQ=60)
CGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCG > SRR4302533.3269380/1‑94 (MQ=60)
CGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCG > SRR4302533.717463/1‑94 (MQ=60)
CGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCG < SRR4302533.4309876/94‑1 (MQ=60)
GCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGA < SRR4302533.3565110/94‑1 (MQ=60)
GCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGA > SRR4302533.278364/1‑94 (MQ=60)
GCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTT < SRR4302533.5699342/94‑1 (MQ=60)
GCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTT < SRR4302533.3308337/94‑1 (MQ=60)
CTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTC < SRR4302533.3531601/94‑1 (MQ=60)
TCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCC < SRR4302533.423433/94‑1 (MQ=60)
GGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATG > SRR4302533.2141440/1‑94 (MQ=60)
TGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATGCTG < SRR4302533.1264906/94‑1 (MQ=60)
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AGATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATGCTG > NC_000913/1705428‑1705614
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
