Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,725,518 |
(G)6→5 |
coding (836/1098 nt) |
nemA → |
N‑ethylmaleimide reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,725,513 | 0 | G | . | 98.9%
| 806.9
/ ‑0.2
| 179 | coding (831/1098 nt) | nemA | N‑ethylmaleimide reductase |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base . (95/82); total (97/82) |
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01 |
Only 100 of 211 total aligned reads displayed.
GGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA > NC_000913/1725421‑1725600
|
gCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgg > 1:1883357/1‑93 (MQ=255)
gCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgg > 2:1145783/1‑93 (MQ=255)
gCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgg > 2:1733801/1‑93 (MQ=255)
cccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggg > 1:1160914/1‑93 (MQ=255)
cccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggg < 1:6092066/93‑1 (MQ=255)
ccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggg < 1:3668575/93‑1 (MQ=255)
cagAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggg < 2:3610410/91‑1 (MQ=255)
cGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggggg < 1:1035490/93‑1 (MQ=255)
cGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggggg < 1:5321821/93‑1 (MQ=255)
gAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggt > 2:2919863/1‑92 (MQ=255)
aaTGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtg > 2:721617/1‑91 (MQ=255)
aaTGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtg < 1:5935610/93‑3 (MQ=255)
aTGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtga > 2:2580675/1‑90 (MQ=255)
tGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtgaa > 1:3140724/1‑89 (MQ=255)
tGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtgaa > 2:3418554/1‑89 (MQ=255)
gaagaaGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAc > 2:3523970/1‑93 (MQ=255)
gaagaaGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAc > 1:3039686/1‑93 (MQ=255)
aagaagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAcc > 2:3200281/1‑93 (MQ=255)
aagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGta < 1:1260909/93‑1 (MQ=255)
aagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGta < 2:5780923/93‑1 (MQ=255)
aagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGta > 1:4989506/1‑93 (MQ=255)
ccGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATAc < 2:2127079/93‑1 (MQ=255)
ccGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATAc < 2:5943786/93‑1 (MQ=255)
cGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACt < 2:3262805/93‑1 (MQ=255)
cGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACt < 2:22020/93‑1 (MQ=255)
aTGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGa < 1:4612128/93‑1 (MQ=255)
tGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAt > 1:3564963/1‑93 (MQ=255)
gCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATg < 1:5453452/93‑1 (MQ=255)
gCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGAGAACCGTATACTGATg > 2:5251836/1‑93 (MQ=255)
aCTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCg > 1:4210514/1‑93 (MQ=255)
aCTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCg > 1:5402201/1‑93 (MQ=255)
cTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGt > 1:5408420/1‑93 (MQ=255)
tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTcc < 1:106171/93‑1 (MQ=255)
aTCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGG‑GAACCGTATACTGATGCGTTCcg > 2:551925/1‑93 (MQ=255)
aTCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCcg > 1:6250771/1‑93 (MQ=255)
tCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCcgc < 1:1597620/93‑1 (MQ=255)
tGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGa > 2:652864/1‑93 (MQ=255)
tGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGa > 1:3166836/1‑93 (MQ=255)
gATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaa > 2:5725629/1‑93 (MQ=255)
aTTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaa < 1:5902838/93‑1 (MQ=255)
ttGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaaa > 2:5762014/1‑93 (MQ=255)
tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaaaa < 1:5836504/93‑1 (MQ=255)
tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaaaa < 2:2035209/93‑1 (MQ=255)
gAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAg > 2:6017360/1‑93 (MQ=255)
acTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAcgc > 1:5098039/1‑93 (MQ=255)
cTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAcgcg < 2:1647712/93‑1 (MQ=255)
tGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACgcgc < 2:237920/93‑1 (MQ=255)
gggTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGcc < 2:3075089/93‑1 (MQ=255)
gTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCg < 2:5105075/93‑1 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt < 1:5718592/93‑1 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt < 1:3887991/93‑1 (MQ=255)
aaaCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGtt > 1:4864167/1‑93 (MQ=255)
aaCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGttt > 1:96444/1‑93 (MQ=255)
aaCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGttt > 2:2892570/1‑93 (MQ=255)
aCGCTGCATATCTTATCTGCCTATGTCAGAACCATAATGGGC‑GGGGGTGAACCGTATACTGACGCGTTCCCCGAAAAAGTACGCGCCCGTTTc < 2:4859943/93‑1 (MQ=255)
aCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTc > 2:3943371/1‑93 (MQ=255)
cgcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTcc < 2:119371/93‑1 (MQ=255)
cgcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTcc < 2:4227153/93‑1 (MQ=255)
gcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCa > 2:3885705/1‑93 (MQ=255)
gcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCa > 2:2625547/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg < 2:2759544/93‑1 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg > 1:5597445/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg > 1:850261/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGCGAACCGCATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTTCACg > 2:3728470/1‑93 (MQ=255)
cATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGt < 2:4790569/93‑1 (MQ=255)
aTTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTc < 1:3997922/93‑1 (MQ=255)
ttGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTcc > 2:5466014/1‑93 (MQ=255)
gCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGa > 2:6175622/1‑93 (MQ=255)
cTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGAt < 2:5137773/93‑1 (MQ=255)
ttATCTGCATATGTCAGAACCATATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGAtt < 1:6112537/93‑1 (MQ=255)
ttATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGAtt < 1:3963295/93‑1 (MQ=255)
tATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTa > 2:1307604/1‑93 (MQ=255)
tATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTa > 2:5579516/1‑93 (MQ=255)
cATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg > 1:1370960/1‑93 (MQ=255)
cATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:1428946/93‑1 (MQ=255)
atatGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcgc < 2:4529258/93‑1 (MQ=255)
atatGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcgc > 1:1820358/1‑93 (MQ=255)
tatGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa > 1:4508176/1‑93 (MQ=255)
tGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAgg > 2:1076246/1‑93 (MQ=255)
tGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAgg < 2:5283527/93‑1 (MQ=255)
gTCAGAACCAGATTGGGCGGGGGG‑GAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAggg > 1:1944434/1‑92 (MQ=255)
gTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAggg > 1:257497/1‑92 (MQ=255)
gTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt > 2:2833426/1‑93 (MQ=255)
tCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTg > 1:742792/1‑93 (MQ=255)
tCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTg > 1:2743314/1‑93 (MQ=255)
cAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGc < 1:640765/93‑1 (MQ=255)
cAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGc < 1:3200281/93‑1 (MQ=255)
cAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGc < 1:3595458/93‑1 (MQ=255)
aGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCa > 2:2477057/1‑93 (MQ=255)
aGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCa < 1:626027/93‑1 (MQ=255)
gAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCaa > 2:1838474/1‑92 (MQ=255)
aaCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATa < 2:5798649/93‑1 (MQ=255)
aCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACTCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATac > 2:4373695/1‑93 (MQ=255)
aCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATac > 1:2487995/1‑93 (MQ=255)
cAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATacac > 1:2393474/1‑93 (MQ=255)
aGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATAcaca > 2:5672170/1‑93 (MQ=255)
aGATTGGGC‑GGGGGCGAACCGTTTAGTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTTCACGGTCCGGTTATGGGCGTTGGTGCGTacagt > 2:4502409/1‑91 (MQ=255)
ttGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTa > 1:309138/1‑93 (MQ=255)
ttGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTa < 2:4036828/93‑1 (MQ=255)
ttGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCCAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTa > 1:2137775/1‑93 (MQ=255)
|
GGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA > NC_000913/1725421‑1725600
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGC > NC_000913/1725425‑1725608
|
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGT < SRR4302533.1041578/94‑1 (MQ=60)
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGT < SRR4302533.5353713/94‑1 (MQ=60)
AATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGA < SRR4302533.62420/94‑1 (MQ=60)
AATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGA < SRR4302533.5971496/94‑1 (MQ=60)
AATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGA > SRR4302533.4039078/1‑94 (MQ=60)
ATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAA > SRR4302533.3160032/1‑94 (MQ=60)
TGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAC > SRR4302533.3058288/1‑94 (MQ=60)
GAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACC > SRR4302533.3647235/1‑94 (MQ=60)
GAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACC < SRR4302533.5840269/94‑1 (MQ=60)
AAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCG > SRR4302533.838025/1‑94 (MQ=60)
GAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTA > SRR4302533.5019756/1‑94 (MQ=60)
AAGCCGATGCACTGTATCTGATTGACCAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTAT < SRR4302533.6129539/94‑1 (MQ=60)
AAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTAT < SRR4302533.1268450/94‑1 (MQ=60)
AAGCCGATGCACTGGATCTGATTGGACAACTGGGTAAACGCGGCCTTGCTTATCTGCATATGTCAGAACCAGATTAGGC‑GGGGGTGAACCGTAT > SRR4302533.3129780/1‑94 (MQ=60)
GCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATAC > SRR4302533.1835577/1‑94 (MQ=60)
CCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACT < SRR4302533.1531719/94‑1 (MQ=60)
CGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTG > SRR4302533.1296892/1‑94 (MQ=60)
ATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAT > SRR4302533.3586934/1‑94 (MQ=60)
ATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAT < SRR4302533.4640071/94‑1 (MQ=60)
TGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATG < SRR4302533.6290910/94‑1 (MQ=60)
TGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATG < SRR4302533.1005728/94‑1 (MQ=60)
GCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGC < SRR4302533.4018905/94‑1 (MQ=60)
GCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGC < SRR4302533.5486301/94‑1 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGG‑GAACCGGATACTGATGCG > SRR4302533.2503932/1‑94 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG > SRR4302533.4235983/1‑94 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG > SRR4302533.5434664/1‑94 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG < SRR4302533.5435139/94‑1 (MQ=60)
ACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGT > SRR4302533.5440928/1‑94 (MQ=60)
CTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTT > SRR4302533.233553/1‑94 (MQ=60)
CTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTT < SRR4302533.4911013/94‑1 (MQ=60)
TATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCG > SRR4302533.6288166/1‑94 (MQ=60)
TATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCG < SRR4302533.106833/94‑1 (MQ=60)
TATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCG < SRR4302533.2123187/94‑1 (MQ=60)
ATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGC > SRR4302533.1936592/1‑94 (MQ=60)
TCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCG < SRR4302533.1607294/94‑1 (MQ=60)
CTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGC > SRR4302533.6087736/1‑94 (MQ=60)
CTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGA > SRR4302533.3186321/1‑94 (MQ=60)
ATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAA > SRR4302533.391435/1‑94 (MQ=60)
ATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAA < SRR4302533.5938482/94‑1 (MQ=60)
TGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAG < SRR4302533.5871794/94‑1 (MQ=60)
TGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAG < SRR4302533.4235987/94‑1 (MQ=60)
AACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA < SRR4302533.4790805/94‑1 (MQ=60)
AACAACTGAGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA < SRR4302533.761593/94‑1 (MQ=60)
ACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAC < SRR4302533.1250808/94‑1 (MQ=60)
ACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAC < SRR4302533.1048137/94‑1 (MQ=60)
CAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACG > SRR4302533.4791451/1‑94 (MQ=60)
AACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGC > SRR4302533.5128839/1‑94 (MQ=60)
GGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCC < SRR4302533.5817809/94‑1 (MQ=60)
GTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGT > SRR4302533.1075342/1‑94 (MQ=60)
GTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGT > SRR4302533.5468540/1‑94 (MQ=60)
TAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTT < SRR4302533.3911714/94‑1 (MQ=60)
TAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTT < SRR4302533.5753123/94‑1 (MQ=60)
TAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTT > SRR4302533.4893642/1‑94 (MQ=60)
AAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTT > SRR4302533.97049/1‑94 (MQ=60)
CGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACG > SRR4302533.855238/1‑94 (MQ=60)
CGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACG > SRR4302533.5631262/1‑94 (MQ=60)
ATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCC < SRR4302533.4022263/94‑1 (MQ=60)
ATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCC > SRR4302533.3587726/1‑94 (MQ=60)
ATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCC > SRR4302533.5393356/1‑94 (MQ=60)
TTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCG < SRR4302533.3378804/94‑1 (MQ=60)
CTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATT < SRR4302533.5695339/94‑1 (MQ=60)
CTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATT < SRR4302533.5540157/94‑1 (MQ=60)
CTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATT < SRR4302533.2431085/94‑1 (MQ=60)
TTATCTGCATATGTCAGAACCATATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA < SRR4302533.6149429/94‑1 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA < SRR4302533.6325684/94‑1 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA > SRR4302533.2624384/1‑94 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA > SRR4302533.3085657/1‑94 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA < SRR4302533.3987441/94‑1 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA > SRR4302533.165889/1‑94 (MQ=60)
ATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATC < SRR4302533.2827610/94‑1 (MQ=60)
GCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCG > SRR4302533.1379199/1‑94 (MQ=60)
CATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGC > SRR4302533.1831478/1‑94 (MQ=60)
ATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCA > SRR4302533.5075049/1‑94 (MQ=60)
ATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCA > SRR4302533.4535479/1‑94 (MQ=60)
TGTCAGAACCAGATTGGGCGGGGGG‑GAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGG > SRR4302533.1956293/1‑94 (MQ=60)
TGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGG > SRR4302533.259063/1‑94 (MQ=60)
GTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTG > SRR4302533.2760135/1‑94 (MQ=60)
GTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTG > SRR4302533.747163/1‑94 (MQ=60)
CAGAGCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302533.89797/94‑1 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACTGTCAGATTATCGGCGCAGGTGCA > SRR4302533.2306824/1‑94 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302533.3617579/94‑1 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302533.644532/94‑1 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302533.3219973/94‑1 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT < SRR4302533.5338535/94‑1 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT < SRR4302533.629702/94‑1 (MQ=60)
AACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATAC > SRR4302533.2503318/1‑94 (MQ=60)
ACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACA < SRR4302533.3288104/94‑1 (MQ=60)
CCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACAC > SRR4302533.2408249/1‑94 (MQ=60)
GATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGT < SRR4302533.3204575/94‑1 (MQ=60)
ATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA > SRR4302533.311032/1‑94 (MQ=60)
ATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCCAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA > SRR4302533.2150959/1‑94 (MQ=60)
GGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAA < SRR4302533.7218/94‑1 (MQ=60)
gcGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAA < SRR4302533.6248032/92‑1 (MQ=60)
gcGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAA < SRR4302533.4819852/92‑1 (MQ=60)
CGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAA > SRR4302533.4172785/1‑94 (MQ=60)
GGTGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTGCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG < SRR4302533.6138311/94‑1 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGCAAAAG > SRR4302533.4173290/1‑94 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG < SRR4302533.760449/94‑1 (MQ=60)
GGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGC < SRR4302533.555830/94‑1 (MQ=60)
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CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGC > NC_000913/1725425‑1725608
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
