Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,756,526 |
A→G |
V75A (GTG→GCG) |
ynhG ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,756,526 | 0 | A | G | 100.0%
| 703.0
/ NA
| 217 | V75A (GTG→GCG) | ynhG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/103); total (114/103) |
Only 100 of 220 total aligned reads displayed.
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT > NC_000913/1756436‑1756615
|
aGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGcc > 1:2213758/1‑93 (MQ=255)
gCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCg < 1:1104850/93‑1 (MQ=255)
ctctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgg > 1:3289932/1‑93 (MQ=255)
ctctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgg < 2:2280622/93‑1 (MQ=255)
ctctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgg < 2:2014551/93‑1 (MQ=255)
tctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCggg > 2:4158582/1‑93 (MQ=255)
tGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGc > 2:2029604/1‑93 (MQ=255)
tGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGc > 2:3239322/1‑93 (MQ=255)
gCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCg > 1:5414547/1‑93 (MQ=255)
aaGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGAt < 1:4380941/93‑1 (MQ=255)
aGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATa < 1:6202651/93‑1 (MQ=255)
aGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGCGGCGATa > 2:5383231/1‑93 (MQ=255)
ggTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAg < 1:504002/93‑1 (MQ=255)
ggTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAg < 1:2768085/93‑1 (MQ=255)
gTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAgt < 1:608954/93‑1 (MQ=255)
ttAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAgtg > 1:4457742/1‑93 (MQ=255)
tAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAgtgt > 2:4642358/1‑93 (MQ=255)
aCGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTa > 1:5012468/1‑93 (MQ=255)
aTAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTg < 2:635682/93‑1 (MQ=255)
aTAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTg > 1:3867925/1‑93 (MQ=255)
aTAATCCCCTGACGCGGTGCATCAGGTAATAACAGT‑‑TGAAGGAATAGTTATTGTCTTATCAGTGTTTGGGGCCCGGGCGCGAGTGTTATTTGc > 2:2565882/1‑93 (MQ=255)
tAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTgg > 1:863214/1‑93 (MQ=255)
aaTCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGc < 2:4919638/93‑1 (MQ=255)
cccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCa < 1:5308119/93‑1 (MQ=255)
cccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCa > 1:4506492/1‑93 (MQ=255)
cTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAg < 2:4028636/93‑1 (MQ=255)
tGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAgg > 1:3848116/1‑93 (MQ=255)
tGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAgg > 2:4733830/1‑93 (MQ=255)
gACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGa > 2:2191557/1‑93 (MQ=255)
aCGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGAt < 1:2302994/93‑1 (MQ=255)
aCGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGAt > 2:1780251/1‑93 (MQ=255)
cgcgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATc < 2:5633552/93‑1 (MQ=255)
cgcgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGGTTTGGCGCCGGGGCGATAGGGGTATTGGGTTCAAGGATc > 2:2419062/1‑93 (MQ=255)
cgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCaa < 2:4226396/93‑1 (MQ=255)
gTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACa < 2:2893669/93‑1 (MQ=255)
tGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAt < 2:4844855/93‑1 (MQ=255)
tGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAt < 2:5329438/93‑1 (MQ=255)
gCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAtt < 2:4120166/93‑1 (MQ=255)
gCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAtt > 1:5108547/1‑93 (MQ=255)
gCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAtt > 2:180793/1‑93 (MQ=255)
gCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGGTATTGGCTTCAAGGATGAACAtt > 2:876776/1‑93 (MQ=255)
aTCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGc > 2:3932255/1‑93 (MQ=255)
aGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGc > 2:5174961/1‑93 (MQ=255)
ggTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCa < 2:1669071/93‑1 (MQ=255)
ggTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCa > 2:94225/1‑93 (MQ=255)
gTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAg > 1:2486284/1‑93 (MQ=255)
gTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAg < 2:6137626/93‑1 (MQ=255)
taataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGt > 1:460581/1‑93 (MQ=255)
taataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGt < 1:5244810/93‑1 (MQ=255)
aataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTa < 1:1137764/93‑1 (MQ=255)
aataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTa > 2:1324982/1‑93 (MQ=255)
taaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATc < 1:3978164/93‑1 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaa < 1:2458586/93‑1 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaa < 1:2200472/93‑1 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGGATCaa > 2:3397829/1‑93 (MQ=255)
aGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaaaa < 1:1302072/93‑1 (MQ=255)
aGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaaaa < 2:6252308/93‑1 (MQ=255)
aGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaaaa < 2:6070091/93‑1 (MQ=255)
aGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaaaa < 1:6240395/93‑1 (MQ=255)
aGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTGCAAGGATCAACATTGCCGCAGTATCaaaa < 1:401723/93‑1 (MQ=255)
gAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCgg > 1:3731393/1‑93 (MQ=255)
gAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCgg > 2:3263107/1‑93 (MQ=255)
gAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCgg > 2:4205278/1‑93 (MQ=255)
aaGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCggg > 1:4513935/1‑93 (MQ=255)
aaGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCggg < 2:6176009/93‑1 (MQ=255)
gAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCaa > 1:1241191/1‑93 (MQ=255)
gAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCaa > 2:1076951/1‑93 (MQ=255)
gAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCaa > 2:5732135/1‑93 (MQ=255)
gAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCaa > 2:3633849/1‑93 (MQ=255)
aaTAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAAt > 2:3741934/1‑93 (MQ=255)
aTAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATa < 1:2507786/93‑1 (MQ=255)
aTAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATa < 1:1822501/93‑1 (MQ=255)
tAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAg < 2:674782/93‑1 (MQ=255)
aGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGc < 2:333375/93‑1 (MQ=255)
gTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGcc > 2:2739707/1‑93 (MQ=255)
gTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGcc < 1:4653799/93‑1 (MQ=255)
gTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGcc < 1:675591/93‑1 (MQ=255)
ttATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCt < 1:5865634/93‑1 (MQ=255)
tcgtcgTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGag > 1:3394680/1‑92 (MQ=255)
tcgtcgTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGaa < 1:718088/93‑1 (MQ=255)
tcgtcgTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGaa > 1:5801230/1‑93 (MQ=255)
tcgtcgTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGaa < 1:4703302/93‑1 (MQ=255)
cgtcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAg > 2:3613947/1‑93 (MQ=255)
gtcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAgg < 2:4296180/93‑1 (MQ=255)
gtcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAgg > 1:1723655/1‑93 (MQ=255)
tACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGtttt > 1:492121/1‑93 (MQ=255)
tACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGtttt > 2:3440970/1‑93 (MQ=255)
aCCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttttt > 1:5521758/1‑93 (MQ=255)
aCCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttttt < 1:3488616/93‑1 (MQ=255)
ccAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTa < 2:3835886/93‑1 (MQ=255)
ccAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTa < 2:2293747/93‑1 (MQ=255)
aGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATc > 2:3029947/1‑93 (MQ=255)
aGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATc < 2:444875/93‑1 (MQ=255)
aGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATc > 1:257251/1‑93 (MQ=255)
gTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATccc < 2:5538018/93‑1 (MQ=255)
ttttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATcccc > 2:649668/1‑93 (MQ=255)
ttttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATcccc < 1:1022247/93‑1 (MQ=255)
tttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCct > 1:4143142/1‑93 (MQ=255)
ggCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCcttct < 1:2426024/93‑1 (MQ=255)
ggCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCcttct < 2:782144/93‑1 (MQ=255)
|
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT > NC_000913/1756436‑1756615
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTGCA > NC_000913/1756433‑1756619
|
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCG < SRR4302533.3330252/94‑1 (MQ=60)
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCG > SRR4302533.3664685/1‑94 (MQ=60)
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCG < SRR4302533.412871/94‑1 (MQ=60)
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACAAGGTTTTGGCG > SRR4302533.6249418/1‑94 (MQ=60)
CAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCC > SRR4302533.2227417/1‑94 (MQ=60)
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGGTTTGGCGCCG > SRR4302533.58746/1‑94 (MQ=60)
GCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGG < SRR4302533.631113/94‑1 (MQ=60)
GCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGG < SRR4302533.1111398/94‑1 (MQ=60)
GCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGG > SRR4302533.3310244/1‑94 (MQ=60)
CTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGG > SRR4302533.2479353/1‑94 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG < SRR4302533.2773452/94‑1 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG < SRR4302533.4540090/94‑1 (MQ=60)
CTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGC > SRR4302533.2465084/1‑94 (MQ=60)
TGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCG > SRR4302533.4527041/1‑94 (MQ=60)
TGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCG > SRR4302533.5447106/1‑94 (MQ=60)
TGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCG < SRR4302533.5633821/94‑1 (MQ=60)
GCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGA > SRR4302533.3450168/1‑94 (MQ=60)
CAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGAT < SRR4302533.2337424/94‑1 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA > SRR4302533.4848370/1‑94 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA > SRR4302533.4664401/1‑94 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA < SRR4302533.4407390/94‑1 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAG > SRR4302533.5081875/1‑94 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAG < SRR4302533.6239851/94‑1 (MQ=60)
GGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGT < SRR4302533.506994/94‑1 (MQ=60)
GGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGT < SRR4302533.2785066/94‑1 (MQ=60)
GTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTG > SRR4302533.4484698/1‑94 (MQ=60)
GTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTG < SRR4302533.612538/94‑1 (MQ=60)
AACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTA > SRR4302533.5042840/1‑94 (MQ=60)
AACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGATTTGGCGCCGGGGCGATAGTGTTA > SRR4302533.5042839/1‑94 (MQ=60)
ACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTAT > SRR4302533.5112562/1‑94 (MQ=60)
GATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTG > SRR4302533.3891538/1‑94 (MQ=60)
ATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGG < SRR4302533.6156498/94‑1 (MQ=60)
ATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGG > SRR4302533.868272/1‑94 (MQ=60)
TAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGC > SRR4302533.3854930/1‑94 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA > SRR4302533.4533787/1‑94 (MQ=60)
CCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAA < SRR4302533.5339932/94‑1 (MQ=60)
CTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGG > SRR4302533.3871615/1‑94 (MQ=60)
TGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGA > SRR4302533.5361354/1‑94 (MQ=60)
ACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATC < SRR4302533.2317261/94‑1 (MQ=60)
ACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATC > SRR4302533.4667363/1‑94 (MQ=60)
ACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATC > SRR4302533.3772936/1‑94 (MQ=60)
GTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACAT < SRR4302533.744758/94‑1 (MQ=60)
TGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATT > SRR4302533.5139414/1‑94 (MQ=60)
CATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGC > SRR4302533.4707754/1‑94 (MQ=60)
ATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCC > SRR4302533.1202240/1‑94 (MQ=60)
ATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCC < SRR4302533.710366/94‑1 (MQ=60)
CAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGC > SRR4302533.2411881/1‑94 (MQ=60)
GGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAG > SRR4302533.2501603/1‑94 (MQ=60)
GTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGT > SRR4302533.463331/1‑94 (MQ=60)
GTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGT > SRR4302533.4322179/1‑94 (MQ=60)
TAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTA < SRR4302533.5276333/94‑1 (MQ=60)
AATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTAT < SRR4302533.1144532/94‑1 (MQ=60)
ATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATC > SRR4302533.1317336/1‑94 (MQ=60)
TAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCA < SRR4302533.4002384/94‑1 (MQ=60)
TAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCA > SRR4302533.128579/1‑94 (MQ=60)
AACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAA > SRR4302533.2313110/1‑94 (MQ=60)
ACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAA < SRR4302533.2214029/94‑1 (MQ=60)
ACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAA < SRR4302533.2473756/94‑1 (MQ=60)
CAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAA > SRR4302533.5248605/1‑94 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302533.1344906/94‑1 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302533.1309901/94‑1 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302533.1058286/94‑1 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302533.6277760/94‑1 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTGCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302533.404146/94‑1 (MQ=60)
TGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGG > SRR4302533.3754281/1‑94 (MQ=60)
GAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCTGCAGTATCAAAACGTCGGG > SRR4302533.459943/1‑94 (MQ=60)
GAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGG < SRR4302533.3301456/94‑1 (MQ=60)
GAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGG > SRR4302533.4541269/1‑94 (MQ=60)
GGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAACACGTCGGGCAA > SRR4302533.1818220/1‑94 (MQ=60)
GGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAA > SRR4302533.572456/1‑94 (MQ=60)
GGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAA > SRR4302533.1248608/1‑94 (MQ=60)
AATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATA > SRR4302533.2505283/1‑94 (MQ=60)
AATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATA < SRR4302533.2681370/94‑1 (MQ=60)
AANANTNANCGTCGTACCANGTNTTGGCGCCGGGGCGATAGTNTTATTGGCTTCAAGGATCAACATTGCCGCAGTANCAAAACGTCGGGCAATA < SRR4302533.3830645/94‑1 (MQ=60)
ATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAG > SRR4302533.2224026/1‑94 (MQ=60)
ATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAG < SRR4302533.2523241/94‑1 (MQ=60)
ATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAG > SRR4302533.1875812/1‑94 (MQ=60)
ATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAG < SRR4302533.1833633/94‑1 (MQ=60)
AGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCC > SRR4302533.3324945/1‑94 (MQ=60)
GTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCT < SRR4302533.679582/94‑1 (MQ=60)
GTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCT < SRR4302533.4681998/94‑1 (MQ=60)
TTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTG < SRR4302533.5960874/94‑1 (MQ=60)
TTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTG < SRR4302533.5901095/94‑1 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAG > SRR4302533.3415647/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA > SRR4302533.5836274/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA < SRR4302533.5452373/94‑1 (MQ=60)
TCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAG < SRR4302533.3910135/94‑1 (MQ=60)
TCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAG < SRR4302533.4731813/94‑1 (MQ=60)
TCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAG < SRR4302533.722326/94‑1 (MQ=60)
CGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGG > SRR4302533.1734111/1‑94 (MQ=60)
CGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGG > SRR4302533.1119149/1‑94 (MQ=60)
GTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGT < SRR4302533.4040953/94‑1 (MQ=60)
GTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGT < SRR4302533.3741930/94‑1 (MQ=60)
TCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTT < SRR4302533.4249068/94‑1 (MQ=60)
GTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTT > SRR4302533.495062/1‑94 (MQ=60)
GTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGGTTT > SRR4302533.5280966/1‑94 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT > SRR4302533.5555098/1‑94 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT < SRR4302533.6242039/94‑1 (MQ=60)
ACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTA < SRR4302533.3510130/94‑1 (MQ=60)
CCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAT > SRR4302533.2533706/1‑94 (MQ=60)
CCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAT < SRR4302533.5058742/94‑1 (MQ=60)
CAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATC > SRR4302533.3883294/1‑94 (MQ=60)
CAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATC > SRR4302533.258817/1‑94 (MQ=60)
AGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCC > SRR4302533.639681/1‑94 (MQ=60)
AGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCC < SRR4302533.4428861/94‑1 (MQ=60)
TTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCT > SRR4302533.4168259/1‑94 (MQ=60)
TTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCT > SRR4302533.4168260/1‑94 (MQ=60)
TTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCT < SRR4302533.1028257/94‑1 (MQ=60)
GGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTT < SRR4302533.2441005/94‑1 (MQ=60)
GCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACACTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGCAGGTTTTTATTCCCTTCTTGCA > SRR4302533.3459762/1‑94 (MQ=60)
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CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTGCA > NC_000913/1756433‑1756619
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
