Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,765,691 |
A→G |
V340A (GTG→GCG) |
ydiJ ← |
putative oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,765,691 | 0 | A | G | 100.0%
| 627.9
/ NA
| 196 | V340A (GTG→GCG) | ydiJ | putative oxidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/100); total (96/100) |
Only 100 of 202 total aligned reads displayed.
GCACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCACATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGC > NC_000913/1765601‑1765780
|
cacaGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCAt < 2:3339854/93‑1 (MQ=255)
cacaGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCAt < 1:1495721/93‑1 (MQ=255)
acaGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATc > 1:1050421/1‑93 (MQ=255)
acaGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATc < 2:2854362/93‑1 (MQ=255)
agagTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCgg < 2:4471981/93‑1 (MQ=255)
gagTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGt > 2:3734894/1‑93 (MQ=255)
gTGCATTTACCCGCTCATCAATCAGCGCCTCATCCTCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTaa > 1:1882812/1‑93 (MQ=255)
gTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTaa < 1:4326587/93‑1 (MQ=255)
gCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATc > 2:2022879/1‑93 (MQ=255)
cATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCa > 1:2985022/1‑93 (MQ=255)
tttACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAAc < 1:1552226/93‑1 (MQ=255)
tttACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAAc > 2:2452427/1‑93 (MQ=255)
tttACCCGCTCATCAATCAGCCCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAAc < 1:3475987/93‑1 (MQ=255)
ttACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACt < 1:1101149/93‑1 (MQ=255)
tACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTc < 1:400264/93‑1 (MQ=255)
cccGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGc < 1:2144773/93‑1 (MQ=255)
cccGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGc < 1:5509824/93‑1 (MQ=255)
ccGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCt < 2:860380/93‑1 (MQ=255)
ccGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCt > 2:1384101/1‑93 (MQ=255)
cGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTg > 1:3118109/1‑93 (MQ=255)
gCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCAGCGGTAATCAACTCGCTGa < 2:2783736/93‑1 (MQ=255)
cTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGAc < 2:1852081/93‑1 (MQ=255)
cTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGAc > 2:2518250/1‑93 (MQ=255)
tcatcaATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACg < 1:3163022/93‑1 (MQ=255)
tcatcaATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACg > 2:266177/1‑93 (MQ=255)
ccatcaATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACg < 2:1745408/92‑1 (MQ=255)
atcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGa > 1:3407707/1‑93 (MQ=255)
atcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGa > 1:5852291/1‑93 (MQ=255)
atcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGa > 2:4364609/1‑93 (MQ=255)
tcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGaa < 1:6244098/93‑1 (MQ=255)
tcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGaa < 2:4558396/93‑1 (MQ=255)
tcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGaa > 2:4793752/1‑93 (MQ=255)
tcaatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGaa < 2:5281455/93‑1 (MQ=255)
caatcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAAt < 2:6062219/93‑1 (MQ=255)
atcaGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGc > 1:5436920/1‑93 (MQ=255)
caGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCa < 2:3302036/93‑1 (MQ=255)
gcgcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGa < 1:3860351/93‑1 (MQ=255)
gcgcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGa < 2:2067998/93‑1 (MQ=255)
gcgcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGa > 1:3247206/1‑93 (MQ=255)
cgcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGAc > 1:1963488/1‑93 (MQ=255)
gcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCCACTCGCTGACGGAATGCCAGACa > 2:1960024/1‑93 (MQ=255)
gcCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACa > 1:5253733/1‑93 (MQ=255)
ccTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACaa < 2:772983/93‑1 (MQ=255)
cTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAat > 2:1644287/1‑93 (MQ=255)
cTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAat > 1:1022449/1‑93 (MQ=255)
cTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAat < 1:5049828/93‑1 (MQ=255)
tcatcatcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAata > 1:4499213/1‑93 (MQ=255)
tcatcatcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAata > 2:5347259/1‑93 (MQ=255)
tcatcatcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAata < 1:4231577/93‑1 (MQ=255)
catcatcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAatat > 2:1151266/1‑93 (MQ=255)
catcatcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAatat < 2:4086875/93‑1 (MQ=255)
tcatcaCCAGCAAATTCCACAATGTTCATCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCt > 1:3699768/1‑93 (MQ=255)
catcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCtt > 2:5048529/1‑93 (MQ=255)
catcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCtt < 2:3057198/93‑1 (MQ=255)
catcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCtt > 1:383518/1‑93 (MQ=255)
atcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTc > 1:5938510/1‑93 (MQ=255)
tcaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTcc < 1:2434189/93‑1 (MQ=255)
acaCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTcc < 1:2027750/92‑1 (MQ=255)
caCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTccc > 1:262363/1‑93 (MQ=255)
caCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTccc < 2:4656311/93‑1 (MQ=255)
caCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTccc > 1:3961411/1‑93 (MQ=255)
aCCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCcg > 2:4969218/1‑93 (MQ=255)
cAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCcgcg > 1:493398/1‑93 (MQ=255)
cAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCa < 2:2223728/93‑1 (MQ=255)
aaaTTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAg > 2:1357335/1‑93 (MQ=255)
aaaTTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAg > 2:1187468/1‑93 (MQ=255)
aaTTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGa < 1:4732558/93‑1 (MQ=255)
aTTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGAt < 2:1532521/93‑1 (MQ=255)
ttCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGAtt > 1:1386183/1‑93 (MQ=255)
tCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTc < 2:4143840/93‑1 (MQ=255)
tCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTc > 2:5828313/1‑93 (MQ=255)
tCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTc > 2:3816682/1‑93 (MQ=255)
ccACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCa < 1:728340/93‑1 (MQ=255)
cccaATGTTCAACCCGAGCATCTCCTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAg < 1:2547925/91‑1 (MQ=255)
acaATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGc < 1:3781280/93‑1 (MQ=255)
tGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACtt > 2:5407332/1‑93 (MQ=255)
tGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACtt > 1:1288499/1‑93 (MQ=255)
gTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACttt > 1:63607/1‑93 (MQ=255)
ttCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACtttt > 2:2339840/1‑93 (MQ=255)
ttCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACtttt < 2:65956/93‑1 (MQ=255)
aGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAg < 1:2324323/93‑1 (MQ=255)
gCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGt < 2:4066910/93‑1 (MQ=255)
ccGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTcc < 2:3420178/93‑1 (MQ=255)
aGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCAcc > 2:5081666/1‑93 (MQ=255)
aGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCAcc < 2:4595667/93‑1 (MQ=255)
aTCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGtc > 1:3567746/1‑93 (MQ=255)
tctcTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGtct > 2:3656357/1‑93 (MQ=255)
tctTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTctct > 2:5095966/1‑93 (MQ=255)
tctTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTctct < 2:5714362/93‑1 (MQ=255)
ttGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAc > 2:5181638/1‑93 (MQ=255)
ttGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAc > 1:4089972/1‑93 (MQ=255)
ttGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAc < 2:2614364/93‑1 (MQ=255)
ttGGTCAGGCGCATCGCTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCGCCGTCTCTAc < 2:2883117/93‑1 (MQ=255)
tGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAcc < 1:3689662/93‑1 (MQ=255)
ggTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCg > 1:28699/1‑93 (MQ=255)
ggTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCg > 1:5672301/1‑93 (MQ=255)
aGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAg > 1:3901521/1‑93 (MQ=255)
aGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAg < 2:3545012/93‑1 (MQ=255)
aGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAg > 2:5626488/1‑93 (MQ=255)
aGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAg > 2:1006575/1‑93 (MQ=255)
|
GCACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCACATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGC > NC_000913/1765601‑1765780
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCGCACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCACATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGCGCCC > NC_000913/1765598‑1765784
|
CGCGCACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCG < SRR4302533.1021370/94‑1 (MQ=60)
CACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATC > SRR4302533.1056596/1‑94 (MQ=60)
CACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATC < SRR4302533.1504734/94‑1 (MQ=60)
ACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCG < SRR4302533.1090132/94‑1 (MQ=60)
ACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCG > SRR4302533.1390612/1‑94 (MQ=60)
CAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGG > SRR4302533.588942/1‑94 (MQ=60)
AGTGCATTTACCCGCTCATCAATCAGCGCCTCATCCTCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAA > SRR4302533.1894308/1‑94 (MQ=60)
AGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAA < SRR4302533.1977553/94‑1 (MQ=60)
GTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAAT < SRR4302533.4352650/94‑1 (MQ=60)
gtCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATC < SRR4302533.377636/92‑1 (MQ=60)
GCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCA > SRR4302533.3003283/1‑94 (MQ=60)
ATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAAC > SRR4302533.4016691/1‑94 (MQ=60)
TTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACT < SRR4302533.1561572/94‑1 (MQ=60)
TTTACCCGCTCATCAATCAGCCCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACT < SRR4302533.3497434/94‑1 (MQ=60)
TTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTC < SRR4302533.1107676/94‑1 (MQ=60)
TTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTC < SRR4302533.5428434/94‑1 (MQ=60)
TTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTC > SRR4302533.3692049/1‑94 (MQ=60)
TACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCG < SRR4302533.402680/94‑1 (MQ=60)
ACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGC > SRR4302533.1785922/1‑94 (MQ=60)
CCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCT < SRR4302533.5543084/94‑1 (MQ=60)
CCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCT < SRR4302533.2157984/94‑1 (MQ=60)
CCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTG > SRR4302533.3137282/1‑94 (MQ=60)
GCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGAC < SRR4302533.4415221/94‑1 (MQ=60)
CTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACG < SRR4302533.3528799/94‑1 (MQ=60)
TCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGG < SRR4302533.3182491/94‑1 (MQ=60)
CATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGA > SRR4302533.5887673/1‑94 (MQ=60)
CATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGA > SRR4302533.3428757/1‑94 (MQ=60)
TCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAAT < SRR4302533.6281475/94‑1 (MQ=60)
AATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGC > SRR4302533.5469665/1‑94 (MQ=60)
ATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCC < SRR4302533.4040954/94‑1 (MQ=60)
ATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCC > SRR4302533.3929678/1‑94 (MQ=60)
AGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGA > SRR4302533.3267232/1‑94 (MQ=60)
GCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGAC > SRR4302533.1975475/1‑94 (MQ=60)
GCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGAC < SRR4302533.3883918/94‑1 (MQ=60)
CGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACA > SRR4302533.5285298/1‑94 (MQ=60)
CCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAAT > SRR4302533.1028461/1‑94 (MQ=60)
CTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATA > SRR4302533.4526459/1‑94 (MQ=60)
CTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATA < SRR4302533.5080372/94‑1 (MQ=60)
CTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATA > SRR4302533.6316671/1‑94 (MQ=60)
CTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATA > SRR4302533.3714454/1‑94 (MQ=60)
TCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATAT < SRR4302533.4257153/94‑1 (MQ=60)
ATCATCACCAGCAAATTCCACAATGTTCATCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCT > SRR4302533.3722493/1‑94 (MQ=60)
ATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCT < SRR4302533.2590972/94‑1 (MQ=60)
ATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCT > SRR4302533.2073730/1‑94 (MQ=60)
ATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCT > SRR4302533.5252897/1‑94 (MQ=60)
TCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTT < SRR4302533.3271284/94‑1 (MQ=60)
TCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTT > SRR4302533.385835/1‑94 (MQ=60)
CATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTC > SRR4302533.5974416/1‑94 (MQ=60)
ATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCC < SRR4302533.1196522/94‑1 (MQ=60)
TCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC < SRR4302533.5541199/94‑1 (MQ=60)
TCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC < SRR4302533.2391219/94‑1 (MQ=60)
TCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC < SRR4302533.2449226/94‑1 (MQ=60)
TCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC > SRR4302533.3985547/1‑94 (MQ=60)
TCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC > SRR4302533.263954/1‑94 (MQ=60)
ACACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCC < SRR4302533.2040269/94‑1 (MQ=60)
CACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCG < SRR4302533.4748000/94‑1 (MQ=60)
CACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCG < SRR4302533.843461/94‑1 (MQ=60)
CACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCG < SRR4302533.3914822/94‑1 (MQ=60)
CCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCG > SRR4302533.496342/1‑94 (MQ=60)
CAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGC < SRR4302533.4777421/94‑1 (MQ=60)
AAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGA < SRR4302533.699149/94‑1 (MQ=60)
AATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGAT < SRR4302533.4761248/94‑1 (MQ=60)
ATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATT > SRR4302533.1394524/1‑94 (MQ=60)
ATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATT < SRR4302533.5046203/94‑1 (MQ=60)
TTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTC < SRR4302533.3252267/94‑1 (MQ=60)
TCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCA > SRR4302533.2258527/1‑94 (MQ=60)
CCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAG < SRR4302533.2949336/94‑1 (MQ=60)
CCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAG < SRR4302533.732643/94‑1 (MQ=60)
CCCAATGTTCAACCCGAGCATCTCCTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGC < SRR4302533.2563607/94‑1 (MQ=60)
ACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCA < SRR4302533.3804441/94‑1 (MQ=60)
AATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACT > SRR4302533.3055537/1‑94 (MQ=60)
ATGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTT > SRR4302533.1296253/1‑94 (MQ=60)
TGTTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTT > SRR4302533.64022/1‑94 (MQ=60)
TGTTCAGCCCGAGCATCTCTTGGTCACGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTT > SRR4302533.5681045/1‑94 (MQ=60)
TTCAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCTCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTG < SRR4302533.4194812/94‑1 (MQ=60)
CAGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAG < SRR4302533.2847101/94‑1 (MQ=60)
AGCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGT < SRR4302533.2338712/94‑1 (MQ=60)
GCCCGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTC > SRR4302533.1438679/1‑94 (MQ=60)
CGAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCAC < SRR4302533.5851592/94‑1 (MQ=60)
GAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACC < SRR4302533.2476037/94‑1 (MQ=60)
GAGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACC > SRR4302533.4269541/1‑94 (MQ=60)
AGCATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCG > SRR4302533.3881380/1‑94 (MQ=60)
CATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTC > SRR4302533.3589734/1‑94 (MQ=60)
ATCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCT > SRR4302533.3443375/1‑94 (MQ=60)
TCTCTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTC > SRR4302533.1557584/1‑94 (MQ=60)
CTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAC > SRR4302533.4114871/1‑94 (MQ=60)
CTTGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTAC < SRR4302533.3178640/94‑1 (MQ=60)
TGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCG < SRR4302533.3712331/94‑1 (MQ=60)
TGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCG > SRR4302533.5706559/1‑94 (MQ=60)
TGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCG > SRR4302533.1944033/1‑94 (MQ=60)
TGGTCAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCG > SRR4302533.28894/1‑94 (MQ=60)
CAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAG > SRR4302533.3827191/1‑94 (MQ=60)
CAGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAG > SRR4302533.3925343/1‑94 (MQ=60)
AGGCGCATCGGTAATCGACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGC < SRR4302533.1031946/94‑1 (MQ=60)
AGGCGCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGC > SRR4302533.6105480/1‑94 (MQ=60)
GCATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGCGCCC > SRR4302533.3895281/1‑94 (MQ=60)
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CGCGCACAGAGTGCATTTACCCGCTCATCAATCAGCGCCTCATCATCACCAGCAAATTCCACAATGTTCAGCCCGAGCATCTCTTGGTCAGGCACATCGGTAATCAACTCGCTGACGGAATGCCAGACAATATCTTCCCGCGCCAGATTCAGCACTTTTGAGTCCACCGTCTCTACCGAAAGCGCCC > NC_000913/1765598‑1765784
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
