Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,771,671 |
T→C |
L379P (CTG→CCG) |
b1691 → |
putative amino acid/amine transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,771,671 | 0 | T | C | 100.0%
| 650.2
/ NA
| 201 | L379P (CTG→CCG) | b1691 | putative amino acid/amine transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/93); total (108/93) |
Only 100 of 215 total aligned reads displayed.
GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTA > NC_000913/1771581‑1771760
|
gACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGcgccgc < 2:2452933/93‑1 (MQ=255)
aCTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCgccgct > 2:1643135/1‑93 (MQ=255)
cTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctg > 1:1364267/1‑93 (MQ=255)
cTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctg > 2:5281089/1‑93 (MQ=255)
tGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTgg > 1:3096346/1‑93 (MQ=255)
cTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGccc < 2:6307966/93‑1 (MQ=255)
tAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCt < 1:1316335/93‑1 (MQ=255)
tAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCt > 1:4659175/1‑93 (MQ=255)
caaCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCt < 1:5034097/92‑1 (MQ=255)
aaCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTg > 2:4459900/1‑93 (MQ=255)
aCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGa < 1:5832919/93‑1 (MQ=255)
aCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGa < 1:3729297/93‑1 (MQ=255)
aCTTTGTTATTCCACTGATCACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGa > 2:6149664/1‑93 (MQ=255)
cTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAt < 1:3556813/93‑1 (MQ=255)
cTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAt > 2:3846290/1‑93 (MQ=255)
cTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAt > 2:5564240/1‑93 (MQ=255)
tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt < 2:2012122/93‑1 (MQ=255)
tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt < 2:3885312/93‑1 (MQ=255)
ttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTa < 1:79724/93‑1 (MQ=255)
ttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTa < 1:1522787/93‑1 (MQ=255)
tGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAc < 1:3510396/93‑1 (MQ=255)
gTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAcc > 1:3040244/1‑93 (MQ=255)
ttATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCg > 2:5206260/1‑93 (MQ=255)
ccACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAatt > 2:5611177/1‑93 (MQ=255)
ccACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAatt > 2:3106257/1‑93 (MQ=255)
ccACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAatt < 2:1906258/93‑1 (MQ=255)
cACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAatta < 2:4693924/93‑1 (MQ=255)
cACTGATTACCGGATATCTGTCGAACATCGGGCTGCTATATATCATTGTTCTCGATTTTACTTTCGCGTCGCTTGCCCTGATTACCGCTatta > 2:5739111/1‑93 (MQ=255)
cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattatt < 1:3191944/93‑1 (MQ=255)
cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattatt > 2:1443396/1‑93 (MQ=255)
cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattatt < 1:5728929/93‑1 (MQ=255)
tGATTACCGGTTATCTGTCGAACATCGGCCTGCCATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattattt > 1:1118660/1‑92 (MQ=255)
tGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTg < 2:2485978/93‑1 (MQ=255)
ttACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGttt < 2:5145222/93‑1 (MQ=255)
ttACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGttt < 2:1718148/93‑1 (MQ=255)
ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa > 2:4371054/1‑93 (MQ=255)
ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa < 2:2555365/93‑1 (MQ=255)
cGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAt > 1:398671/1‑93 (MQ=255)
ggTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATc > 2:5921964/1‑93 (MQ=255)
ggTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATc < 2:1244714/93‑1 (MQ=255)
gTTATCTGTCGAACATCGGCCTGCACTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATcc > 1:4368598/1‑93 (MQ=255)
gTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATcc < 1:5056692/93‑1 (MQ=255)
tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc < 1:2098118/93‑1 (MQ=255)
tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc < 2:830483/93‑1 (MQ=255)
cTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAt < 2:6217159/93‑1 (MQ=255)
cTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAt < 1:891505/93‑1 (MQ=255)
tGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAtt > 1:354225/1‑93 (MQ=255)
tCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAc < 2:1406232/93‑1 (MQ=255)
tCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAc < 2:223619/93‑1 (MQ=255)
cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc < 1:2817600/93‑1 (MQ=255)
cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc > 1:5305383/1‑93 (MQ=255)
gAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcg > 1:2603835/1‑93 (MQ=255)
gAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcg > 1:4045203/1‑93 (MQ=255)
aaCATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcgc > 2:5527057/1‑93 (MQ=255)
aaCATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcgc < 1:4449090/93‑1 (MQ=255)
aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt > 2:2891155/1‑93 (MQ=255)
aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt > 2:2417979/1‑93 (MQ=255)
gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa < 2:372413/93‑1 (MQ=255)
gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa > 2:3579642/1‑93 (MQ=255)
gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa < 1:5247091/93‑1 (MQ=255)
cTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatt < 2:886915/93‑1 (MQ=255)
cTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatt < 2:706900/93‑1 (MQ=255)
cTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatt < 2:2316263/93‑1 (MQ=255)
tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatta > 1:4096304/1‑93 (MQ=255)
tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatta > 2:2786598/1‑93 (MQ=255)
tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatta > 1:1738415/1‑93 (MQ=255)
tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatta > 2:336527/1‑93 (MQ=255)
aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc > 1:1931106/1‑93 (MQ=255)
atatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTcc < 1:2190026/93‑1 (MQ=255)
tatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCt > 1:3841754/1‑93 (MQ=255)
tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa > 2:2603760/1‑93 (MQ=255)
tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa > 2:5952353/1‑93 (MQ=255)
atCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaa > 1:829060/1‑93 (MQ=255)
atCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaa > 2:4939229/1‑93 (MQ=255)
cATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaaaa > 1:3785384/1‑93 (MQ=255)
cATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaaaa < 1:6088022/93‑1 (MQ=255)
cATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaaaa < 1:5500333/93‑1 (MQ=255)
aTTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAat > 1:3135927/1‑93 (MQ=255)
tGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatga < 1:2421155/93‑1 (MQ=255)
ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg < 1:1862676/93‑1 (MQ=255)
ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg < 2:5451764/93‑1 (MQ=255)
tctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgt < 2:2644649/93‑1 (MQ=255)
ctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgtg > 2:2158411/1‑93 (MQ=255)
tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc < 2:3961051/93‑1 (MQ=255)
tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc > 1:5787529/1‑93 (MQ=255)
tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc < 2:4838531/93‑1 (MQ=255)
cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCg > 1:6013937/1‑93 (MQ=255)
aTTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGt > 1:6111616/1‑93 (MQ=255)
ttttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGtt > 2:4194870/1‑93 (MQ=255)
ttttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGtt > 1:5601685/1‑93 (MQ=255)
ttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTg > 1:2551808/1‑93 (MQ=255)
cTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCg > 1:2289772/1‑93 (MQ=255)
cTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCg < 1:3475843/93‑1 (MQ=255)
cTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCg < 2:2873061/93‑1 (MQ=255)
cTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCg > 1:1444095/1‑93 (MQ=255)
tttCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGa > 1:5954428/1‑93 (MQ=255)
tttCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGa > 1:1605163/1‑93 (MQ=255)
ttCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAg < 2:4858508/93‑1 (MQ=255)
cgcgCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCg < 1:730353/93‑1 (MQ=255)
gcgcCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGt < 1:4167802/93‑1 (MQ=255)
|
GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTA > NC_000913/1771581‑1771760
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT > NC_000913/1771579‑1771764
|
TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCG < SRR4302533.328791/94‑1 (MQ=60)
ACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTG > SRR4302533.1372462/1‑94 (MQ=60)
CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG > SRR4302533.5785071/1‑94 (MQ=60)
CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG < SRR4302533.5682860/94‑1 (MQ=60)
CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG < SRR4302533.834748/94‑1 (MQ=60)
CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG > SRR4302533.3115378/1‑94 (MQ=60)
CTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCT > SRR4302533.2232394/1‑94 (MQ=60)
CTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCT > SRR4302533.4687409/1‑94 (MQ=60)
TAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTG < SRR4302533.1324231/94‑1 (MQ=60)
CAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTG < SRR4302533.5064591/94‑1 (MQ=60)
ACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAT < SRR4302533.3752175/94‑1 (MQ=60)
ACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAT < SRR4302533.5868171/94‑1 (MQ=60)
CTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATT < SRR4302533.717495/94‑1 (MQ=60)
CTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATT < SRR4302533.3578733/94‑1 (MQ=60)
TTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTA > SRR4302533.5589100/1‑94 (MQ=60)
TTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAC < SRR4302533.1531951/94‑1 (MQ=60)
TTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAC < SRR4302533.80235/94‑1 (MQ=60)
TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC < SRR4302533.3532037/94‑1 (MQ=60)
TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC < SRR4302533.3111101/94‑1 (MQ=60)
TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC > SRR4302533.3058853/1‑94 (MQ=60)
GTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCG < SRR4302533.4983041/94‑1 (MQ=60)
TTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGC > SRR4302533.1519046/1‑94 (MQ=60)
TTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAAT < SRR4302533.2796587/94‑1 (MQ=60)
TTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTCTCGCGCCGCTGGCCCTGATTACCGCAAT < SRR4302533.1338180/94‑1 (MQ=60)
CTGATTACCGGTTATCTGTCGAACATCGGCCTGCCATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTT > SRR4302533.1125296/1‑94 (MQ=60)
CTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTG < SRR4302533.5763524/94‑1 (MQ=60)
CTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTG < SRR4302533.3211579/94‑1 (MQ=60)
TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGT > SRR4302533.595046/1‑94 (MQ=60)
TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGT < SRR4302533.23914/94‑1 (MQ=60)
GATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTT < SRR4302533.359741/94‑1 (MQ=60)
ATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTT > SRR4302533.170589/1‑94 (MQ=60)
TACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTT < SRR4302533.1995928/94‑1 (MQ=60)
TACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTT > SRR4302533.5263787/1‑94 (MQ=60)
TACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTT < SRR4302533.6136071/94‑1 (MQ=60)
ACTGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTA < SRR4302533.786949/94‑1 (MQ=60)
ACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTA < SRR4302533.3572371/94‑1 (MQ=60)
CCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAT > SRR4302533.401080/1‑94 (MQ=60)
GGTTATCTGTCGAACATCGGCCTGCACTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCC > SRR4302533.4394970/1‑94 (MQ=60)
GGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCC < SRR4302533.247547/94‑1 (MQ=60)
GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG < SRR4302533.5087256/94‑1 (MQ=60)
GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG < SRR4302533.2969973/94‑1 (MQ=60)
GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG > SRR4302533.1582927/1‑94 (MQ=60)
TTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGC > SRR4302533.4362774/1‑94 (MQ=60)
TATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCT > SRR4302533.814975/1‑94 (MQ=60)
TATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCT < SRR4302533.2111062/94‑1 (MQ=60)
ATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTA > SRR4302533.3142331/1‑94 (MQ=60)
ATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTA > SRR4302533.4888770/1‑94 (MQ=60)
ATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTA > SRR4302533.2194789/1‑94 (MQ=60)
ATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTCACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTA > SRR4302533.3396800/1‑94 (MQ=60)
TCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAT < SRR4302533.4542738/94‑1 (MQ=60)
CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT > SRR4302533.4067325/1‑94 (MQ=60)
CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT < SRR4302533.896744/94‑1 (MQ=60)
CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT < SRR4302533.1817355/94‑1 (MQ=60)
CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT > SRR4302533.356385/1‑94 (MQ=60)
GTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAC > SRR4302533.91794/1‑94 (MQ=60)
TCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACC > SRR4302533.5846898/1‑94 (MQ=60)
TCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACC > SRR4302533.5337177/1‑94 (MQ=60)
CGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCG > SRR4302533.2619831/1‑94 (MQ=60)
CGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCG > SRR4302533.4069823/1‑94 (MQ=60)
CGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCG < SRR4302533.2834942/94‑1 (MQ=60)
GAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGC < SRR4302533.6005078/94‑1 (MQ=60)
AACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCG < SRR4302533.4475997/94‑1 (MQ=60)
ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT > SRR4302533.3922894/1‑94 (MQ=60)
CGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTC < SRR4302533.1376836/94‑1 (MQ=60)
GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT > SRR4302533.5308157/1‑94 (MQ=60)
GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT > SRR4302533.3848762/1‑94 (MQ=60)
GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT < SRR4302533.5278639/94‑1 (MQ=60)
CCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATT > SRR4302533.6120924/1‑94 (MQ=60)
CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA > SRR4302533.1322759/1‑94 (MQ=60)
CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA > SRR4302533.4121241/1‑94 (MQ=60)
CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA > SRR4302533.2597455/1‑94 (MQ=60)
CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA > SRR4302533.1748961/1‑94 (MQ=60)
CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA > SRR4302533.1748960/1‑94 (MQ=60)
TGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTAT < SRR4302533.3170577/94‑1 (MQ=60)
CAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTC > SRR4302533.1942885/1‑94 (MQ=60)
CAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTC > SRR4302533.541105/1‑94 (MQ=60)
ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT < SRR4302533.2203518/94‑1 (MQ=60)
ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT > SRR4302533.3865224/1‑94 (MQ=60)
ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT > SRR4302533.5078374/1‑94 (MQ=60)
ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT > SRR4302533.3554703/1‑94 (MQ=60)
TATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAA > SRR4302533.833922/1‑94 (MQ=60)
ATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAA > SRR4302533.641923/1‑94 (MQ=60)
TCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAA > SRR4302533.3808560/1‑94 (MQ=60)
CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT > SRR4302533.3155211/1‑94 (MQ=60)
CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT < SRR4302533.5533514/94‑1 (MQ=60)
CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT < SRR4302533.6124824/94‑1 (MQ=60)
ATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATG < SRR4302533.2583747/94‑1 (MQ=60)
TGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAT < SRR4302533.2436105/94‑1 (MQ=60)
TTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGT < SRR4302533.1874035/94‑1 (MQ=60)
TCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTG < SRR4302533.3225537/94‑1 (MQ=60)
CTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGC > SRR4302533.5822493/1‑94 (MQ=60)
TCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCG > SRR4302533.6050380/1‑94 (MQ=60)
CGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGG > SRR4302533.3787697/1‑94 (MQ=60)
GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT > SRR4302533.6148506/1‑94 (MQ=60)
GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT > SRR4302533.4173379/1‑94 (MQ=60)
GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT > SRR4302533.3520364/1‑94 (MQ=60)
ATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTT > SRR4302533.5635534/1‑94 (MQ=60)
TTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTT > SRR4302533.4081596/1‑94 (MQ=60)
TTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTG > SRR4302533.2567511/1‑94 (MQ=60)
TTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTG > SRR4302533.396145/1‑94 (MQ=60)
ACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCG > SRR4302533.2303951/1‑94 (MQ=60)
ACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCG < SRR4302533.4421452/94‑1 (MQ=60)
ACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCG > SRR4302533.1452807/1‑94 (MQ=60)
ACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCG > SRR4302533.1918999/1‑94 (MQ=60)
CTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGA < SRR4302533.3497290/94‑1 (MQ=60)
CTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGA > SRR4302533.5990445/1‑94 (MQ=60)
CTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGA > SRR4302533.1614881/1‑94 (MQ=60)
CGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGT < SRR4302533.734658/94‑1 (MQ=60)
GCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTA < SRR4302533.4193060/94‑1 (MQ=60)
GCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTA > SRR4302533.5724768/1‑94 (MQ=60)
CGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCAGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAA > SRR4302533.4169403/1‑94 (MQ=60)
GCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAA > SRR4302533.1862170/1‑94 (MQ=60)
CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT > SRR4302533.2713901/1‑94 (MQ=60)
CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT > SRR4302533.3250573/1‑94 (MQ=60)
CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT > SRR4302533.4036137/1‑94 (MQ=60)
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TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT > NC_000913/1771579‑1771764
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
