Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,771,671 T→C L379P (CTG→CCG)  b1691 → putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,771,6710TC92.1% 823.0 / 48.4 305L379P (CTG→CCG) b1691putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base T (10/14);  new base C (155/126);  total (165/140)
Fisher's exact test for biased strand distribution p-value = 2.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01

Only 100 of 329 total aligned reads displayed.

GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT  >  NC_000913/1771581‑1771763
                                                                                          |                                                                                            
gACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGcgccgc                                                                                            >  1:8500740/1‑93 (MQ=255)
 aCTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCgccgct                                                                                           >  1:2796317/1‑93 (MQ=255)
 aCTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCgccgct                                                                                           >  2:5787966/1‑93 (MQ=255)
  cTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctg                                                                                          <  2:7918187/93‑1 (MQ=255)
   tGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctgc                                                                                         >  1:5609561/1‑92 (MQ=255)
      cTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGccc                                                                                      <  1:5297518/93‑1 (MQ=255)
       tAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCt                                                                                     <  2:1105715/93‑1 (MQ=255)
         aCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGa                                                                                   <  2:1813846/93‑1 (MQ=255)
          cTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGAt                                                                                  <  2:2403154/93‑1 (MQ=255)
           tttGTTATTCCTCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt                                                                                 <  2:2758864/93‑1 (MQ=255)
           tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGAtt                                                                                 <  1:9030779/93‑1 (MQ=255)
           tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt                                                                                 <  2:7492317/93‑1 (MQ=255)
              gTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAcc                                                                              <  2:3985458/93‑1 (MQ=255)
                  ttCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTCCTTTCGCGCCGCTGGCCCTGATTACCGCaa                                                                          <  1:3533910/93‑1 (MQ=255)
                  ttCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCaa                                                                          >  2:3160192/1‑93 (MQ=255)
                   tCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAat                                                                         <  1:7146359/93‑1 (MQ=255)
                   tCCACTGATTACCGGTTATCTGTCGAACATCGGACTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAat                                                                         <  1:939488/93‑1 (MQ=255)
                      ccTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattat                                                                      <  1:1883821/92‑1 (MQ=255)
                      aCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattat                                                                      >  2:9079181/1‑93 (MQ=255)
                       cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAattatt                                                                     <  1:8784049/93‑1 (MQ=255)
                       cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattatt                                                                     >  2:9455286/1‑93 (MQ=255)
                        tGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTg                                                                    >  1:7694783/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  2:9734995/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  1:9888018/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  2:2165897/1‑93 (MQ=255)
                          aTTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGtt                                                                  >  2:841306/1‑93 (MQ=255)
                           ttACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGttt                                                                 <  1:747764/93‑1 (MQ=255)
                             aCCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGttttt                                                               <  2:1589217/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTGCCGCAATTATTGTTTTTa                                                              <  1:627438/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              <  2:5337430/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              >  1:1562438/1‑93 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              >  1:6703960/1‑93 (MQ=255)
                               cGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAt                                                             >  1:7956993/1‑93 (MQ=255)
                                ggTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATc                                                            >  1:2163615/1‑93 (MQ=255)
                                 gTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATcc                                                           >  1:1158033/1‑93 (MQ=255)
                                  ttATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCg                                                          <  2:4248872/93‑1 (MQ=255)
                                   tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTGGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc                                                         <  1:5110193/93‑1 (MQ=255)
                                   tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc                                                         >  1:5876039/1‑93 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCgat                                                        >  2:5198397/1‑91 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCt                                                        >  1:9842299/1‑93 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCt                                                        <  1:4754214/93‑1 (MQ=255)
                                     tCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTa                                                       >  2:3329233/1‑93 (MQ=255)
                                      cTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAt                                                      >  2:9536122/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    >  2:6717487/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    >  2:431740/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGACCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    <  1:4478907/93‑1 (MQ=255)
                                         tCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAc                                                   >  2:7025941/1‑93 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  >  2:4064335/1‑93 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  <  2:3746596/93‑1 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  <  2:7644526/93‑1 (MQ=255)
                                             aCATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcgcg                                               >  2:6632357/1‑93 (MQ=255)
                                              cATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGt                                              <  2:440472/93‑1 (MQ=255)
                                               aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt                                             <  1:206912/93‑1 (MQ=255)
                                               aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt                                             <  1:9648149/93‑1 (MQ=255)
                                                tCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGttt                                            >  2:2244711/1‑93 (MQ=255)
                                                  ggCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTc                                          >  1:5479638/1‑93 (MQ=255)
                                                  ggCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTc                                          >  2:2104150/1‑93 (MQ=255)
                                                   gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa                                         >  1:9958476/1‑93 (MQ=255)
                                                   gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa                                         <  1:7402926/93‑1 (MQ=255)
                                                    ccTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCat                                        >  1:4010684/1‑93 (MQ=255)
                                                     cTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatt                                       >  1:121141/1‑93 (MQ=255)
                                                      tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCattt                                      >  1:8057106/1‑92 (MQ=255)
                                                      tGCAATATATCATTGTTCTCGATTTTACTTTCCCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTCTTCCCGCGTTTttatta                                      >  1:2423936/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   >  2:61708/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   >  2:102676/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   <  1:2507181/93‑1 (MQ=255)
                                                          atatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTcc                                  >  1:10023013/1‑93 (MQ=255)
                                                           tatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCt                                 >  1:5972299/1‑93 (MQ=255)
                                                           tatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCt                                 <  2:8834403/93‑1 (MQ=255)
                                                             tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa                               >  1:497713/1‑93 (MQ=255)
                                                             tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa                               >  2:4903552/1‑93 (MQ=255)
                                                               tCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaaa                             >  2:3116213/1‑93 (MQ=255)
                                                                   tGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATT‑CTTAAAatgat                        >  1:5757881/1‑93 (MQ=255)
                                                                    gTTCTCGATTTTACTTTCGCGCCTCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgat                        <  2:5525089/93‑1 (MQ=255)
                                                                     ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg                       >  1:4640670/1‑93 (MQ=255)
                                                                     ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg                       <  1:8950901/93‑1 (MQ=255)
                                                                      tctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgt                      <  2:2630972/93‑1 (MQ=255)
                                                                       ctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgtg                     <  1:3477110/93‑1 (MQ=255)
                                                                       ctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgtg                     >  1:917766/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:9497237/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    <  1:2926732/93‑1 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:180037/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:6101544/1‑93 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCTTTTTCATTATTCCTGAAAATGATGTGCg                   <  1:334234/93‑1 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCg                   <  2:1365350/93‑1 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCg                   >  1:6547691/1‑93 (MQ=255)
                                                                          gATTCTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACACCGTTTTCATTATTCCTGAAAATGAtgtctgg                  >  1:7186883/1‑89 (MQ=255)
                                                                           aTTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGt                 <  1:3602366/93‑1 (MQ=255)
                                                                            ttttACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCggct                <  2:4551892/93‑3 (MQ=255)
                                                                            ttttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGtt                >  2:4990813/1‑93 (MQ=255)
                                                                             tttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGttt               >  1:1739321/1‑93 (MQ=255)
                                                                              ttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTg              <  1:3206792/93‑1 (MQ=255)
                                                                               tACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTgg             >  2:5033206/1‑93 (MQ=255)
                                                                               tACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTgg             <  2:6414541/93‑1 (MQ=255)
                                                                                  tttCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGa          <  1:6403882/93‑1 (MQ=255)
                                                                                     cgcgCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCg       >  2:8631530/1‑93 (MQ=255)
                                                                                     cgcgCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCg       <  1:196546/93‑1 (MQ=255)
                                                                                      gcgcCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGt      >  1:3765308/1‑93 (MQ=255)
                                                                                      gcgcCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGt      >  2:5482104/1‑93 (MQ=255)
                                                                                          tgctgGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGACAATGATGTGCGGTTTGGCGAGCGTACAt  >  1:6639788/1‑93 (MQ=255)
                                                                                          |                                                                                            
GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT  >  NC_000913/1771581‑1771763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  >  NC_000913/1771579‑1771764
                                                                                            |                                                                                             
TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCG                                                                                              >  SRR4302540.4242072/1‑94 (MQ=60)
 GGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGC                                                                                             >  SRR4302540.8599515/1‑94 (MQ=60)
  GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCT                                                                                            <  SRR4302540.10015339/94‑1 (MQ=60)
  GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCT                                                                                            <  SRR4302540.9145462/94‑1 (MQ=60)
  GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCT                                                                                            >  SRR4302540.2826510/1‑94 (MQ=60)
  GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCT                                                                                            >  SRR4302540.1062578/1‑94 (MQ=60)
  GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCT                                                                                            <  SRR4302540.6744908/94‑1 (MQ=60)
   ACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTG                                                                                           >  SRR4302540.3295329/1‑94 (MQ=60)
    CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG                                                                                          >  SRR4302540.950828/1‑94 (MQ=60)
    CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGG                                                                                          >  SRR4302540.86724/1‑94 (MQ=60)
    CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGC                                                                                          >  SRR4302540.5671275/1‑94 (MQ=60)
    CTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCAATTTTACTTTCGCGCCGCTGG                                                                                          >  SRR4302540.5045435/1‑94 (MQ=60)
     TGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGC                                                                                         >  SRR4302540.8124695/1‑94 (MQ=60)
     TGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGC                                                                                         >  SRR4302540.1216246/1‑94 (MQ=60)
     TGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGC                                                                                         >  SRR4302540.6555531/1‑94 (MQ=60)
        CTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCT                                                                                      <  SRR4302540.2499165/94‑1 (MQ=60)
        CTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCT                                                                                      <  SRR4302540.5355470/94‑1 (MQ=60)
          AACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGA                                                                                    <  SRR4302540.9664427/94‑1 (MQ=60)
           ACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCTTGAT                                                                                   >  SRR4302540.5104563/1‑94 (MQ=60)
            CTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATT                                                                                  <  SRR4302540.4523642/94‑1 (MQ=60)
            CTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATT                                                                                  >  SRR4302540.3733068/1‑94 (MQ=60)
             TTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTA                                                                                 <  SRR4302540.9139156/94‑1 (MQ=60)
             TTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTA                                                                                 <  SRR4302540.1737764/94‑1 (MQ=60)
             TTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTA                                                                                 <  SRR4302540.1931877/94‑1 (MQ=60)
               TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC                                                                               <  SRR4302540.4705656/94‑1 (MQ=60)
               TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC                                                                               <  SRR4302540.1916102/94‑1 (MQ=60)
               TGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACC                                                                               >  SRR4302540.8821780/1‑94 (MQ=60)
                GTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCG                                                                              <  SRR4302540.6698700/94‑1 (MQ=60)
                 TTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGC                                                                             >  SRR4302540.3453156/1‑94 (MQ=60)
                   ATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAA                                                                           <  SRR4302540.2509765/94‑1 (MQ=60)
                    TTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTCCTTTCGCGCCGCTGGCCCTGATTACCGCAAT                                                                          <  SRR4302540.3572489/94‑1 (MQ=60)
                    TTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAAT                                                                          <  SRR4302540.3572488/94‑1 (MQ=60)
                    TTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAAT                                                                          >  SRR4302540.3063419/1‑94 (MQ=60)
                     TCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATT                                                                         <  SRR4302540.7225990/94‑1 (MQ=60)
                     TCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATT                                                                         >  SRR4302540.3539450/1‑94 (MQ=60)
                     TCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATT                                                                         >  SRR4302540.969201/1‑94 (MQ=60)
                     TCCACTGATTACCGGTTATCTGTCGAACATCGGACTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATT                                                                         <  SRR4302540.949316/94‑1 (MQ=60)
                      CCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTA                                                                        >  SRR4302540.5399232/1‑94 (MQ=60)
                       CACTGATTACCTGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTAT                                                                       <  SRR4302540.9110543/94‑1 (MQ=60)
                       CACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTAT                                                                       >  SRR4302540.6122145/1‑94 (MQ=60)
                       CACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTAT                                                                       <  SRR4302540.9110542/94‑1 (MQ=60)
                        CCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATT                                                                      <  SRR4302540.6001795/94‑1 (MQ=60)
                        CCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATT                                                                      <  SRR4302540.1904461/94‑1 (MQ=60)
                        CCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATT                                                                      <  SRR4302540.724226/94‑1 (MQ=60)
                         CTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTG                                                                     <  SRR4302540.8885721/94‑1 (MQ=60)
                         CTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTG                                                                     >  SRR4302540.7782422/1‑94 (MQ=60)
                         CTGAGTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTG                                                                     <  SRR4302540.8885722/94‑1 (MQ=60)
                          TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGCTTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGT                                                                    >  SRR4302540.9423339/1‑94 (MQ=60)
                          TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGT                                                                    >  SRR4302540.7968426/1‑94 (MQ=60)
                          TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGT                                                                    >  SRR4302540.10003473/1‑94 (MQ=60)
                          TGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGT                                                                    <  SRR4302540.3806067/94‑1 (MQ=60)
                           GATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTT                                                                   >  SRR4302540.2410198/1‑94 (MQ=60)
                           GATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTT                                                                   <  SRR4302540.5798448/94‑1 (MQ=60)
                           GATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTT                                                                   <  SRR4302540.177940/94‑1 (MQ=60)
                             TTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTT                                                                 <  SRR4302540.755729/94‑1 (MQ=60)
                              TACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTT                                                                <  SRR4302540.7439031/94‑1 (MQ=60)
                              TACCGGTGAGCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCCGATTACCGCAATTATTGTTTTT                                                                <  SRR4302540.1114737/94‑1 (MQ=60)
                               ACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTA                                                               >  SRR4302540.1579590/1‑94 (MQ=60)
                               ACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTA                                                               >  SRR4302540.6777951/1‑94 (MQ=60)
                                CCGGTTATCTGTCGAACATCGTCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAT                                                              <  SRR4302540.5247659/94‑1 (MQ=60)
                                CCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTGCCGCAATTATTGTTTTTAT                                                              <  SRR4302540.634117/94‑1 (MQ=60)
                                CCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAT                                                              >  SRR4302540.8049740/1‑94 (MQ=60)
                                CCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAT                                                              >  SRR4302540.3091481/1‑94 (MQ=60)
                                 CGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATC                                                             >  SRR4302540.2186920/1‑94 (MQ=60)
                                 CGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATC                                                             >  SRR4302540.1650813/1‑94 (MQ=60)
                                  GGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCC                                                            >  SRR4302540.1170075/1‑94 (MQ=60)
                                  GGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCC                                                            >  SRR4302540.6926512/1‑94 (MQ=60)
                                  GGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCC                                                            <  SRR4302540.6120113/94‑1 (MQ=60)
                                   GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG                                                           <  SRR4302540.9499879/94‑1 (MQ=60)
                                   GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG                                                           <  SRR4302540.3254105/94‑1 (MQ=60)
                                   GTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCG                                                           >  SRR4302540.1202078/1‑94 (MQ=60)
                                    TTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGC                                                          >  SRR4302540.5940991/1‑94 (MQ=60)
                                    TTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGC                                                          >  SRR4302540.65873/1‑94 (MQ=60)
                                    TTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGC                                                          >  SRR4302540.3447229/1‑94 (MQ=60)
                                     TATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTGGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCT                                                         <  SRR4302540.5165503/94‑1 (MQ=60)
                                     TATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCT                                                         >  SRR4302540.9957357/1‑94 (MQ=60)
                                     TATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCT                                                         >  SRR4302540.7508772/1‑94 (MQ=60)
                                      ATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTA                                                        <  SRR4302540.4804945/94‑1 (MQ=60)
                                        CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT                                                      >  SRR4302540.3044061/1‑94 (MQ=60)
                                        CTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATT                                                      >  SRR4302540.4122978/1‑94 (MQ=60)
                                          GTCGCACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAC                                                    <  SRR4302540.9233375/94‑1 (MQ=60)
                                          GTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAC                                                    <  SRR4302540.9233374/94‑1 (MQ=60)
                                          GTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAC                                                    >  SRR4302540.8101560/1‑94 (MQ=60)
                                          GTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGACCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAC                                                    <  SRR4302540.4527482/94‑1 (MQ=60)
                                           TCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACC                                                   <  SRR4302540.5367576/94‑1 (MQ=60)
                                           TCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACC                                                   <  SRR4302540.5161075/94‑1 (MQ=60)
                                            CGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCG                                                  <  SRR4302540.3610073/94‑1 (MQ=60)
                                             GAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGC                                                 >  SRR4302540.5604009/1‑94 (MQ=60)
                                             GAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGC                                                 >  SRR4302540.7088248/1‑94 (MQ=60)
                                             GAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGC                                                 <  SRR4302540.471746/94‑1 (MQ=60)
                                                 ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT                                             <  SRR4302540.6379103/94‑1 (MQ=60)
                                                 ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT                                             >  SRR4302540.7249666/1‑94 (MQ=60)
                                                 ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT                                             <  SRR4302540.208938/94‑1 (MQ=60)
                                                 ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT                                             <  SRR4302540.3888425/94‑1 (MQ=60)
                                                 ATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTT                                             <  SRR4302540.9761763/94‑1 (MQ=60)
                                                   CGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTC                                           >  SRR4302540.5539955/1‑94 (MQ=60)
                                                   CGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTC                                           >  SRR4302540.8951784/1‑94 (MQ=60)
                                                    GGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCA                                          <  SRR4302540.5273794/94‑1 (MQ=60)
                                                    GGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCA                                          >  SRR4302540.10074694/1‑94 (MQ=60)
                                                    GGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCA                                          <  SRR4302540.6457309/94‑1 (MQ=60)
                                                    GGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCA                                          >  SRR4302540.10074695/1‑94 (MQ=60)
                                                    GGCCTGCAATATATCATTGTTCTCGATTTTACTGTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCA                                          <  SRR4302540.9799761/94‑1 (MQ=60)
                                                     GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT                                         <  SRR4302540.7485399/94‑1 (MQ=60)
                                                     GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT                                         <  SRR4302540.8002029/94‑1 (MQ=60)
                                                     GCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCAT                                         >  SRR4302540.4053881/1‑94 (MQ=60)
                                                      CCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATT                                        >  SRR4302540.122439/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCACTTATTGCTTTTATCCGCTATTACCGCGTTTTCATTA                                       >  SRR4302540.5787323/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTT                                       >  SRR4302540.8150661/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTT                                       >  SRR4302540.2449773/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA                                       >  SRR4302540.5561144/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA                                       >  SRR4302540.7632203/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA                                       <  SRR4302540.5880460/94‑1 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCCGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTTATTA                                       >  SRR4302540.5873319/1‑94 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCACTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTA                                       <  SRR4302540.8278148/94‑1 (MQ=60)
                                                       CTGCAATATATCATTGTTCTCGATTTTACTTTCCCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTCTTCCCGCGTTTTTATTA                                       >  SRR4302540.2450051/1‑94 (MQ=60)
                                                          CAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTC                                    >  SRR4302540.4503002/1‑94 (MQ=60)
                                                           AATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCC                                   >  SRR4302540.10139647/1‑94 (MQ=60)
                                                           AATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCC                                   <  SRR4302540.2534258/94‑1 (MQ=60)
                                                           AATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCC                                   <  SRR4302540.2183622/94‑1 (MQ=60)
                                                           AATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCC                                   >  SRR4302540.6632353/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTTGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT                                  >  SRR4302540.1804073/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGTCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCTCGTTTTCATTATTCCT                                  >  SRR4302540.9977254/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTCCCGCGTTTTCATTATTCCT                                  <  SRR4302540.8286360/94‑1 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT                                  >  SRR4302540.2799605/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT                                  >  SRR4302540.6038400/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCT                                  >  SRR4302540.8229076/1‑94 (MQ=60)
                                                            ATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTA‑TGTTTTTATCCGCTATTTACGCGTTTTCATTATTCCTG                                 >  SRR4302540.3585507/1‑94 (MQ=60)
                                                             TATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTG                                 >  SRR4302540.60062/1‑94 (MQ=60)
                                                             TATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTG                                 <  SRR4302540.1529947/94‑1 (MQ=60)
                                                              ATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGA                                >  SRR4302540.503050/1‑94 (MQ=60)
                                                              ATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGA                                <  SRR4302540.6116925/94‑1 (MQ=60)
                                                               TATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAA                               <  SRR4302540.4600834/94‑1 (MQ=60)
                                                                ATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAA                              >  SRR4302540.7665749/1‑94 (MQ=60)
                                                                  CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT                            <  SRR4302540.5545208/94‑1 (MQ=60)
                                                                  CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT                            >  SRR4302540.2011844/1‑94 (MQ=60)
                                                                  CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT                            >  SRR4302540.977674/1‑94 (MQ=60)
                                                                  CATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAAT                            <  SRR4302540.5001375/94‑1 (MQ=60)
                                                                   ATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAATATG                           >  SRR4302540.3831391/1‑94 (MQ=60)
                                                                   ATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATG                           >  SRR4302540.1562560/1‑94 (MQ=60)
                                                                    TTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGA                          <  SRR4302540.4593304/94‑1 (MQ=60)
                                                                    TTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGA                          <  SRR4302540.6793055/94‑1 (MQ=60)
                                                                    TTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATT‑CTTAAAATGAT                         >  SRR4302540.5821444/1‑94 (MQ=60)
                                                                     TGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAT                         <  SRR4302540.2042666/94‑1 (MQ=60)
                                                                      GTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATG                        <  SRR4302540.6606569/94‑1 (MQ=60)
                                                                      GTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATG                        >  SRR4302540.10102057/1‑94 (MQ=60)
                                                                      GTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATG                        >  SRR4302540.4690358/1‑94 (MQ=60)
                                                                       TTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGT                       <  SRR4302540.1849024/94‑1 (MQ=60)
                                                                       TTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGT                       <  SRR4302540.9056401/94‑1 (MQ=60)
                                                                       TTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGT                       <  SRR4302540.9519172/94‑1 (MQ=60)
                                                                        TCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTG                      >  SRR4302540.927452/1‑94 (MQ=60)
                                                                        TCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTG                      <  SRR4302540.1592700/94‑1 (MQ=60)
                                                                         CTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGC                     >  SRR4302540.9609789/1‑94 (MQ=60)
                                                                         CTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGC                     >  SRR4302540.181828/1‑94 (MQ=60)
                                                                         CTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGC                     >  SRR4302540.6169479/1‑94 (MQ=60)
                                                                         CTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGC                     <  SRR4302540.3514969/94‑1 (MQ=60)
                                                                          TCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCG                    <  SRR4302540.2958820/94‑1 (MQ=60)
                                                                          TCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCG                    >  SRR4302540.6620321/1‑94 (MQ=60)
                                                                           CGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCTTTTTCATTATTCCTGAAAATGATGTGCGG                   <  SRR4302540.337594/94‑1 (MQ=60)
                                                                           CGATTCTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACACCGTTTTCATTATTCCTGAAAATGATGTctgg                   >  SRR4302540.7266994/1‑90 (MQ=60)
                                                                            GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT                  >  SRR4302540.6268058/1‑94 (MQ=60)
                                                                            GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT                  <  SRR4302540.1936179/94‑1 (MQ=60)
                                                                            GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT                  <  SRR4302540.7759397/94‑1 (MQ=60)
                                                                            GATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGT                  >  SRR4302540.2489181/1‑94 (MQ=60)
                                                                             ATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTT                 <  SRR4302540.282654/94‑1 (MQ=60)
                                                                             ATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTT                 <  SRR4302540.1843584/94‑1 (MQ=60)
                                                                             ATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTT                 <  SRR4302540.3641729/94‑1 (MQ=60)
                                                                              TTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTT                >  SRR4302540.2170097/1‑94 (MQ=60)
                                                                              TTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTT                <  SRR4302540.2642378/94‑1 (MQ=60)
                                                                              TTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTT                >  SRR4302540.2917480/1‑94 (MQ=60)
                                                                              TTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTT                >  SRR4302540.1758128/1‑94 (MQ=60)
                                                                                TTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGG              <  SRR4302540.6290995/94‑1 (MQ=60)
                                                                                TTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGG              <  SRR4302540.3241616/94‑1 (MQ=60)
                                                                                 TACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGC             <  SRR4302540.4823610/94‑1 (MQ=60)
                                                                                 TACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGC             >  SRR4302540.7511320/1‑94 (MQ=60)
                                                                                 TACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGC             <  SRR4302540.7415498/94‑1 (MQ=60)
                                                                                  ACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCG            <  SRR4302540.35927/94‑1 (MQ=60)
                                                                                    TTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAG          <  SRR4302540.6475163/94‑1 (MQ=60)
                                                                                    TTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAG          <  SRR4302540.9656745/94‑1 (MQ=60)
                                                                                       CGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGT       <  SRR4302540.198494/94‑1 (MQ=60)
                                                                                       CGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGT       >  SRR4302540.3806390/1‑94 (MQ=60)
                                                                                        GCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTA      <  SRR4302540.9958398/94‑1 (MQ=60)
                                                                                         CGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATTCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAA     >  SRR4302540.9063130/1‑94 (MQ=60)
                                                                                          GCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAT    >  SRR4302540.6927312/1‑94 (MQ=60)
                                                                                           CTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGACAATGATGTGCGGTTTGGCGAGCGTACAT   >  SRR4302540.6713263/1‑94 (MQ=60)
                                                                                           CTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT   >  SRR4302540.6713264/1‑94 (MQ=60)
                                                                                           CCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT   <  SRR4302540.9206587/94‑1 (MQ=60)
                                                                                            CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  <  SRR4302540.8662877/94‑1 (MQ=60)
                                                                                            CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  >  SRR4302540.9737321/1‑94 (MQ=60)
                                                                                            CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  >  SRR4302540.3798050/1‑94 (MQ=60)
                                                                                            CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  <  SRR4302540.6895017/94‑1 (MQ=60)
                                                                                            CGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  >  SRR4302540.7534308/1‑94 (MQ=60)
                                                                                            |                                                                                             
TGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATT  >  NC_000913/1771579‑1771764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑