Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,787,410 |
A→G |
T318A (ACT→GCT) |
aroH → |
3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,787,410 | 0 | A | G | 99.3%
| 436.4
/ NA
| 136 | T318A (ACT→GCT) | aroH | 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (51/84); minor base T (0/1); total (51/85) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 148 total aligned reads displayed.
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG > NC_000913/1787320‑1787498
|
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct > 1:5541400/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct > 1:5861318/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:5643368/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 1:4235154/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 1:4274996/93‑1 (MQ=255)
tCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCtt > 1:1208496/1‑93 (MQ=255)
tCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCtt < 2:5679952/93‑1 (MQ=255)
ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa < 1:6227651/93‑1 (MQ=255)
cGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAc > 2:5470225/1‑93 (MQ=255)
cGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAc > 1:3728199/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTTGGCAGTCAGCAGCTCGCTTNCg > 1:3353792/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg > 2:2884352/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg > 2:3699723/1‑93 (MQ=255)
cAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACgg > 1:5016133/1‑93 (MQ=255)
cAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACgg > 1:409545/1‑93 (MQ=255)
aaTGGCTCTACGGCGATTTCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGt < 2:1861568/93‑1 (MQ=255)
aaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGt > 2:2796934/1‑93 (MQ=255)
aaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGt > 1:1430983/1‑93 (MQ=255)
aTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTc > 1:4113521/1‑93 (MQ=255)
ggCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCaa > 1:1952079/1‑93 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt > 1:378818/1‑93 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt > 1:1128283/1‑93 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc < 2:1881590/93‑1 (MQ=255)
tctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATcc > 2:4757635/1‑93 (MQ=255)
ctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCa < 1:3539507/93‑1 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt < 1:4300832/93‑1 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt < 2:3168978/93‑1 (MQ=255)
aCGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAtt > 2:3411245/1‑93 (MQ=255)
aCGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAtt > 2:257424/1‑93 (MQ=255)
aCGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAtt < 1:1808303/93‑1 (MQ=255)
gggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 2:1687046/92‑1 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 1:1277077/93‑1 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc < 1:4907476/93‑1 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc > 1:950062/1‑93 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc < 2:1842352/93‑1 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc < 2:6034540/93‑1 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc < 2:44106/93‑1 (MQ=255)
ggCGATTGCTGAAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc < 2:5439246/93‑1 (MQ=255)
gCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAcc > 1:3332417/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 2:911249/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 1:2295798/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 1:3906302/1‑93 (MQ=255)
ttGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAcc > 1:5003745/1‑93 (MQ=255)
ttGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAcc < 2:6078056/93‑1 (MQ=255)
tGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtg > 2:3648187/1‑93 (MQ=255)
tGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtg > 2:6235043/1‑93 (MQ=255)
tGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtg < 2:2381851/93‑1 (MQ=255)
ggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtgt > 1:4148672/1‑93 (MQ=255)
aaTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTct < 2:3427761/93‑1 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctg > 2:3283100/1‑93 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctg > 2:329131/1‑93 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctg < 2:2531586/93‑1 (MQ=255)
ttATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgg < 1:3158774/93‑1 (MQ=255)
ttATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgg < 2:4187927/93‑1 (MQ=255)
ggCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctg > 1:939032/1‑93 (MQ=255)
gCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctgg < 2:4888643/93‑1 (MQ=255)
cGGAAAGTTTCCTACGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctggg < 1:3602188/93‑1 (MQ=255)
ggAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGgga > 2:160761/1‑93 (MQ=255)
gAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggag < 2:2934589/93‑1 (MQ=255)
gAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggag > 1:1038918/1‑93 (MQ=255)
aaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga < 2:1765507/93‑1 (MQ=255)
aGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt > 1:248250/1‑93 (MQ=255)
tttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAc < 2:895061/93‑1 (MQ=255)
ttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAcc < 1:321496/93‑1 (MQ=255)
tcccTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAcc < 2:4228228/91‑1 (MQ=255)
tCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCTCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCg < 1:2602456/93‑1 (MQ=255)
tCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCg > 2:2171331/1‑93 (MQ=255)
tCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCg < 2:1396738/93‑1 (MQ=255)
tCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCg > 1:449404/1‑93 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 2:5950091/93‑1 (MQ=255)
gcgcGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACg < 1:3586047/93‑1 (MQ=255)
aaGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTgg > 1:4609714/1‑93 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt < 2:456675/93‑1 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt < 2:2743442/93‑1 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt < 2:4612362/93‑1 (MQ=255)
aaCGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGa < 1:1778710/93‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc < 2:5209246/93‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc > 1:1036249/1‑93 (MQ=255)
aaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACt < 1:5981398/93‑1 (MQ=255)
aaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACt < 2:6275264/93‑1 (MQ=255)
aaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc < 2:4451288/93‑1 (MQ=255)
aaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc < 1:3877238/93‑1 (MQ=255)
aaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc < 1:3726064/93‑1 (MQ=255)
aaaaGCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc < 1:5421615/93‑1 (MQ=255)
aaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGc < 1:3574862/93‑1 (MQ=255)
aTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGcc < 1:1682807/93‑1 (MQ=255)
cgtcgGCAGTCAGCCGCTCGCTTTCGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc > 2:5070875/1‑93 (MQ=255)
cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 1:6229954/93‑1 (MQ=255)
gtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctct < 1:2543661/93‑1 (MQ=255)
ggCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCg < 1:2675034/93‑1 (MQ=255)
cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt < 2:3131182/93‑1 (MQ=255)
cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt < 2:4799297/93‑1 (MQ=255)
cgTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTa < 2:1016983/92‑1 (MQ=255)
gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg > 1:4456362/1‑93 (MQ=255)
tCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGa > 2:1078710/1‑93 (MQ=255)
cAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAt < 1:2770170/93‑1 (MQ=255)
ccGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAcc < 2:5981735/93‑1 (MQ=255)
ccGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAcc < 2:5379010/93‑1 (MQ=255)
cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc < 1:1014878/93‑1 (MQ=255)
gCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCg < 2:4028971/93‑1 (MQ=255)
|
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG > NC_000913/1787320‑1787498
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
|
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTTAGCCGCTCG > SRR4302533.1106083/1‑94 (MQ=60)
AAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGC > SRR4302533.1460768/1‑94 (MQ=60)
AATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCT > SRR4302533.5896758/1‑94 (MQ=60)
AATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCT > SRR4302533.5574863/1‑94 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT < SRR4302533.4260742/94‑1 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT < SRR4302533.4300714/94‑1 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT > SRR4302533.1215754/1‑94 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC > SRR4302533.3751069/1‑94 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302533.6264960/94‑1 (MQ=60)
CGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTTGGCAGTCAGCAGCTCGCTTNCG > SRR4302533.3374516/1‑94 (MQ=60)
GCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGG > SRR4302533.5046521/1‑94 (MQ=60)
GCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGG > SRR4302533.412002/1‑94 (MQ=60)
CAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGT > SRR4302533.1439632/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC > SRR4302533.4138519/1‑94 (MQ=60)
TGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAA > SRR4302533.1963977/1‑94 (MQ=60)
GGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAT < SRR4302533.3722014/94‑1 (MQ=60)
GGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAT > SRR4302533.1134988/1‑94 (MQ=60)
GGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAT > SRR4302533.381101/1‑94 (MQ=60)
CTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAT < SRR4302533.3561316/94‑1 (MQ=60)
TACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATT < SRR4302533.4326700/94‑1 (MQ=60)
ACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTA < SRR4302533.1819308/94‑1 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAC > SRR4302533.955641/1‑94 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAC < SRR4302533.1284753/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACC < SRR4302533.4937209/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACC < SRR4302533.1236405/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACC > SRR4302533.3353010/1‑94 (MQ=60)
GATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAC > SRR4302533.2310015/1‑94 (MQ=60)
GATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAC > SRR4302533.3930165/1‑94 (MQ=60)
ATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACC > SRR4302533.5034071/1‑94 (MQ=60)
TTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCC > SRR4302533.1657850/1‑94 (MQ=60)
CTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTG > SRR4302533.97217/1‑94 (MQ=60)
TGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGT > SRR4302533.4173809/1‑94 (MQ=60)
AATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGTCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTG < SRR4302533.6273624/94‑1 (MQ=60)
AATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTG < SRR4302533.2544601/94‑1 (MQ=60)
TTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGG < SRR4302533.3178213/94‑1 (MQ=60)
TATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGC < SRR4302533.458734/94‑1 (MQ=60)
ATGGCGGAAAGTTCCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT < SRR4302533.1802561/94‑1 (MQ=60)
TGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTG > SRR4302533.944549/1‑94 (MQ=60)
TGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTG < SRR4302533.4169580/94‑1 (MQ=60)
GCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGG < SRR4302533.3881956/94‑1 (MQ=60)
CGGAAAGTTTCCTACGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGA < SRR4302533.3624357/94‑1 (MQ=60)
GGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAG > SRR4302533.1045024/1‑94 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT > SRR4302533.249783/1‑94 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT < SRR4302533.3386728/94‑1 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT < SRR4302533.3942558/94‑1 (MQ=60)
GTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAC < SRR4302533.2641393/94‑1 (MQ=60)
TTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCG > SRR4302533.452091/1‑94 (MQ=60)
TTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCG < SRR4302533.323462/94‑1 (MQ=60)
TCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCTCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGA < SRR4302533.2618448/94‑1 (MQ=60)
CTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAC < SRR4302533.6111349/94‑1 (MQ=60)
GCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGC < SRR4302533.5625061/94‑1 (MQ=60)
GCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGC < SRR4302533.3608134/94‑1 (MQ=60)
CGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCC < SRR4302533.2247706/94‑1 (MQ=60)
GAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGG > SRR4302533.4637630/1‑94 (MQ=60)
GAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGG > SRR4302533.4283138/1‑94 (MQ=60)
AAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGT < SRR4302533.4335644/94‑1 (MQ=60)
AGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTC > SRR4302533.4950767/1‑94 (MQ=60)
GGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCG > SRR4302533.1083112/1‑94 (MQ=60)
GGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCG < SRR4302533.3241339/94‑1 (MQ=60)
AACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAA < SRR4302533.1789540/94‑1 (MQ=60)
CAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAC > SRR4302533.1042340/1‑94 (MQ=60)
AAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTC < SRR4302533.6017623/94‑1 (MQ=60)
AAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCG < SRR4302533.3900901/94‑1 (MQ=60)
AAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCG < SRR4302533.3748923/94‑1 (MQ=60)
AAAAGCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCG < SRR4302533.5454238/94‑1 (MQ=60)
AATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCC < SRR4302533.3596897/94‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302533.5339065/94‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302533.1693000/94‑1 (MQ=60)
CGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302533.6267267/94‑1 (MQ=60)
GTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTG < SRR4302533.2559313/94‑1 (MQ=60)
GGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTNGTCGAAAAACTCGCCNCNGNGG > SRR4302533.2575115/1‑94 (MQ=60)
GGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGG < SRR4302533.2691443/94‑1 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302533.4483310/1‑94 (MQ=60)
TCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAT < SRR4302533.3132524/94‑1 (MQ=60)
CAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATA < SRR4302533.2787170/94‑1 (MQ=60)
CCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCC < SRR4302533.3603788/94‑1 (MQ=60)
CGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG < SRR4302533.1020838/94‑1 (MQ=60)
TCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTT < SRR4302533.502530/94‑1 (MQ=60)
TCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTT > SRR4302533.4812167/1‑94 (MQ=60)
CGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTC > SRR4302533.2639014/1‑94 (MQ=60)
GCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > SRR4302533.4684600/1‑94 (MQ=60)
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CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
