Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,787,410 |
A→G |
T318A (ACT→GCT) |
aroH → |
3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,787,410 | 0 | A | G | 99.4%
| 531.8
/ ‑5.1
| 167 | T318A (ACT→GCT) | aroH | 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (65/101); total (65/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 |
Only 100 of 187 total aligned reads displayed.
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > NC_000913/1787320‑1787499
|
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:8757114/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:4435048/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct > 2:1826849/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct > 1:2243058/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:8062203/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTAGGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:4435045/93‑1 (MQ=255)
tCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCtt > 1:8679211/1‑93 (MQ=255)
ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa < 1:9350186/93‑1 (MQ=255)
ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa < 1:3353135/93‑1 (MQ=255)
ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa < 1:5274725/93‑1 (MQ=255)
gaaaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg < 2:5285194/91‑1 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg > 2:4520492/1‑93 (MQ=255)
cAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACgg > 2:4975364/1‑93 (MQ=255)
aaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGt < 1:7416212/93‑1 (MQ=255)
aTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTc > 1:2618126/1‑93 (MQ=255)
aTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTc > 1:6615916/1‑93 (MQ=255)
tGGCTCTACGGCGATTGCTGGAATTATGGCGGACAGTTTTCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCa > 1:9016395/1‑93 (MQ=255)
tGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCa > 1:6409815/1‑93 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAGGGTCAAt > 1:4811118/1‑93 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt < 2:7824980/93‑1 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc < 2:5773174/93‑1 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc < 2:5102019/93‑1 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc < 2:731365/93‑1 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTAAGCCGCTCGCTTACGGTCAATc > 2:2436106/1‑93 (MQ=255)
tctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATcc > 1:926778/1‑93 (MQ=255)
ctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCa > 1:9328039/1‑93 (MQ=255)
ctACGGAGATTGATGGAATAATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATACa < 2:8963175/93‑1 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt < 1:3173171/93‑1 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt > 2:6668006/1‑93 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt > 2:4461608/1‑93 (MQ=255)
aCGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAtt > 1:6744596/1‑93 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 1:7812013/93‑1 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 2:6464761/93‑1 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 2:8787360/93‑1 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc > 1:7704573/1‑93 (MQ=255)
ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTCGGCGAAGGAACGCAAAAAATCGTGGGCAGTCAGCCGTCCGCTTACGGTCAATCCATTAc < 1:1794434/93‑1 (MQ=255)
gCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAcc < 1:463500/93‑1 (MQ=255)
gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa > 2:8869571/1‑93 (MQ=255)
gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa < 2:6825981/93‑1 (MQ=255)
gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa > 1:3196034/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 2:3708540/1‑93 (MQ=255)
cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTATGGTCAATCCATTACCGACCCgt < 2:9012566/93‑1 (MQ=255)
cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgt > 2:7100569/1‑93 (MQ=255)
cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgt < 2:8256123/93‑1 (MQ=255)
tGGAATTATGGCGGAAAGTTTCCTGCGCGACGGAACGCAAAAAATCGTCGGCAGTAAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtc > 1:8107873/1‑92 (MQ=255)
gggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCACGCTTACGGTCAATCCATTACCGACCCgtg < 2:5761884/92‑1 (MQ=255)
ggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtgt > 2:7794285/1‑93 (MQ=255)
ggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtgt < 2:4078636/93‑1 (MQ=255)
gAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTc < 1:987828/93‑1 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTATCGACCCGTGTctg > 2:6585499/1‑93 (MQ=255)
tATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctggg > 1:9612012/1‑93 (MQ=255)
tATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctggg > 1:8494431/1‑93 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 1:276666/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 2:202052/93‑1 (MQ=255)
tGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggct < 2:7533796/93‑1 (MQ=255)
ggCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctg < 1:3704300/93‑1 (MQ=255)
gAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggag > 1:9501345/1‑93 (MQ=255)
aaaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagg < 1:2080513/93‑1 (MQ=255)
aaatttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga < 1:3623067/90‑1 (MQ=255)
aaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga < 2:1059636/93‑1 (MQ=255)
aGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt < 2:7847446/93‑1 (MQ=255)
aGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt < 1:7512018/93‑1 (MQ=255)
aGTTGCCTGATCGAACGAACGGAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt < 1:7512321/93‑1 (MQ=255)
tttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAc > 2:9749661/1‑93 (MQ=255)
ttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAcc > 2:94491/1‑93 (MQ=255)
ccTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGa > 2:2543357/1‑93 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 2:87144/93‑1 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 1:4437715/93‑1 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 2:5881428/93‑1 (MQ=255)
tGCGGGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAc < 2:7427571/93‑1 (MQ=255)
cgAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCt < 1:9895256/93‑1 (MQ=255)
ggAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTc > 1:6808237/1‑93 (MQ=255)
gCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaa < 1:8534001/93‑1 (MQ=255)
cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa < 2:778885/93‑1 (MQ=255)
cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa < 2:9308485/93‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc < 1:5915170/93‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc < 1:3438335/93‑1 (MQ=255)
aaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCATTCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc < 2:5726981/93‑1 (MQ=255)
aaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGc < 2:3558468/93‑1 (MQ=255)
tcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCct > 2:2580455/1‑93 (MQ=255)
tcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCct < 1:8714436/93‑1 (MQ=255)
cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 2:1403087/93‑1 (MQ=255)
cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 1:6286813/93‑1 (MQ=255)
cgtcgCCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 2:2178514/93‑1 (MQ=255)
ggCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCg > 1:5826233/1‑93 (MQ=255)
gCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCgg > 2:2871626/1‑93 (MQ=255)
gCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCgg < 1:2032654/93‑1 (MQ=255)
cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt > 1:6550909/1‑93 (MQ=255)
gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg < 2:5481189/93‑1 (MQ=255)
tCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGa < 2:8345054/93‑1 (MQ=255)
cAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAt > 2:4633314/1‑93 (MQ=255)
aGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATa < 2:1026549/93‑1 (MQ=255)
aGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATa < 2:7958504/93‑1 (MQ=255)
gCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAc > 1:485775/1‑93 (MQ=255)
cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc < 1:5519673/93‑1 (MQ=255)
cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc > 1:3873996/1‑93 (MQ=255)
cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc < 1:1826849/93‑1 (MQ=255)
gCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCg < 2:9268800/93‑1 (MQ=255)
cTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc < 1:416419/93‑1 (MQ=255)
cTCCCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc < 1:7760653/93‑1 (MQ=255)
|
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > NC_000913/1787320‑1787499
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
|
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCG < SRR4302540.3648604/94‑1 (MQ=60)
AAATCCGCAATGGCTCTACGGCTATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGC > SRR4302540.1843677/1‑94 (MQ=60)
AAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGC > SRR4302540.1163714/1‑94 (MQ=60)
AATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCT > SRR4302540.2267163/1‑94 (MQ=60)
AATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGCTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCT > SRR4302540.2059329/1‑94 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT > SRR4302540.3402399/1‑94 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT > SRR4302540.8780010/1‑94 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302540.9461553/94‑1 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302540.3389886/94‑1 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302540.3880651/94‑1 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302540.5332315/94‑1 (MQ=60)
GCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAAGCACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGG > SRR4302540.7712060/1‑94 (MQ=60)
CAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTCCCTGCGCGAAGGAACCCAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGC > SRR4302540.5436906/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC > SRR4302540.2646424/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC > SRR4302540.6689185/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC < SRR4302540.7498815/94‑1 (MQ=60)
CTGGCTCTACGGCGATTGCTGGAATTATGGCGGACAGTTTTCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCA > SRR4302540.9124584/1‑94 (MQ=60)
ATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCA > SRR4302540.6481154/1‑94 (MQ=60)
GGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAGGGTCAAT > SRR4302540.4862616/1‑94 (MQ=60)
GGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAT > SRR4302540.4862617/1‑94 (MQ=60)
CTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCC > SRR4302540.936536/1‑94 (MQ=60)
TCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCA > SRR4302540.9439278/1‑94 (MQ=60)
TACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATT > SRR4302540.6819120/1‑94 (MQ=60)
TACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATT < SRR4302540.3207664/94‑1 (MQ=60)
TACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATT > SRR4302540.8067216/1‑94 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCCGTCAGCCGCTCGCTTACGGTCAATCCATTAC > SRR4302540.7792792/1‑94 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAC > SRR4302540.7792791/1‑94 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAC < SRR4302540.7903304/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACC < SRR4302540.2675165/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTCGGCGAAGGAACGCAAAAAATCGTGGGCAGTCAGCCGTCCGCTTACGGTCAATCCATTACC < SRR4302540.1813945/94‑1 (MQ=60)
GCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCG < SRR4302540.468446/94‑1 (MQ=60)
CGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGA > SRR4302540.3230743/1‑94 (MQ=60)
CGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGA < SRR4302540.6086236/94‑1 (MQ=60)
CTGGAATTATGGCGGAAAGTTTCCTGCGCGACGGAACGCAAAAAATCGTCGGCAGTAAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTC > SRR4302540.8201974/1‑94 (MQ=60)
GGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTC < SRR4302540.7171274/94‑1 (MQ=60)
GAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCT < SRR4302540.997921/94‑1 (MQ=60)
GAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCCTTTCT > SRR4302540.2359810/1‑94 (MQ=60)
GAATTATGGCGGAAAGTTTCCGGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCT < SRR4302540.4121301/94‑1 (MQ=60)
ATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGG < SRR4302540.4428073/94‑1 (MQ=60)
ATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGG < SRR4302540.8312789/94‑1 (MQ=60)
ATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGG > SRR4302540.3140773/1‑94 (MQ=60)
TTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGG > SRR4302540.9725345/1‑94 (MQ=60)
TTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGG > SRR4302540.8593135/1‑94 (MQ=60)
ATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT < SRR4302540.279387/94‑1 (MQ=60)
GGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGG < SRR4302540.3744738/94‑1 (MQ=60)
acAAAGTTTCCTGCGCGAAGGAACGCAAAACATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAACCCATTACCGCCCCGTGTCTGGGCTGGGAG < SRR4302540.6972980/92‑1 (MQ=60)
GGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAG > SRR4302540.9613928/1‑94 (MQ=60)
GGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAG > SRR4302540.9186380/1‑94 (MQ=60)
GAAAGTATCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGG < SRR4302540.2159354/94‑1 (MQ=60)
AAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGA < SRR4302540.2102867/94‑1 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT > SRR4302540.4802277/1‑94 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT < SRR4302540.6845983/94‑1 (MQ=60)
AAATTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT < SRR4302540.3662713/94‑1 (MQ=60)
AGTTTCTTGCGCGAAGGACCGCAAAGAATCGTGGGCAGTCAGCCGCTCGCTTACGCTCAATCCATTCCCGACCCGTGTCTGGGCTGGGAGGATA < SRR4302540.7595990/94‑1 (MQ=60)
AGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATA < SRR4302540.7595991/94‑1 (MQ=60)
AGTTTCCTGCGCGAAGGAACGCAAAAAAGCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATA < SRR4302540.3378925/94‑1 (MQ=60)
AGTTGCCTGATCGAACGAACGGAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATA < SRR4302540.7596299/94‑1 (MQ=60)
ttctcctacgccAAGGAACTCAAAAATTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAGTACCGACCCGTGTCTGGGCTGGGAGGATAC < SRR4302540.9050567/82‑1 (MQ=60)
TTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCG > SRR4302540.9500901/1‑94 (MQ=60)
CTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCCGCCGCTCGCTTATGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAC < SRR4302540.9677914/94‑1 (MQ=60)
CTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAC < SRR4302540.6778931/94‑1 (MQ=60)
CTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAC < SRR4302540.4485800/94‑1 (MQ=60)
TGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACG < SRR4302540.9442038/94‑1 (MQ=60)
TGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACG < SRR4302540.901914/94‑1 (MQ=60)
CGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTG < SRR4302540.10010812/94‑1 (MQ=60)
CGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTG > SRR4302540.6502265/1‑94 (MQ=60)
AAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGT < SRR4302540.5873903/94‑1 (MQ=60)
AGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTC > SRR4302540.6883574/1‑94 (MQ=60)
CGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAA > SRR4302540.8701496/1‑94 (MQ=60)
GCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAA < SRR4302540.8633153/94‑1 (MQ=60)
AAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACT < SRR4302540.3475709/94‑1 (MQ=60)
AAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACT < SRR4302540.5980517/94‑1 (MQ=60)
AAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCG < SRR4302540.9789744/94‑1 (MQ=60)
AAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCG < SRR4302540.862313/94‑1 (MQ=60)
AAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAACGAACGCCTGGTCGAAAAACTCGC > SRR4302540.10077437/1‑94 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302540.2023162/94‑1 (MQ=60)
TCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTC < SRR4302540.8815602/94‑1 (MQ=60)
CGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302540.6356787/94‑1 (MQ=60)
CGTCGGCAGTCAGCCCCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302540.6664345/94‑1 (MQ=60)
cccgccaccCAGCCTCTCACTTACGGTCGATCCATTACCGACCCGTGTCTGGGCTGGTAGTATACCGAACGCCTGGTCGAAAAACTCGCCTCTG < SRR4302540.9302435/85‑1 (MQ=60)
GTCGGCAGCCAGCCGGCCGCTTACAGTCAAGCCATTACCGGCCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTG < SRR4302540.4202741/94‑1 (MQ=60)
CGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGTGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCG > SRR4302540.5890645/1‑94 (MQ=60)
CGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCG > SRR4302540.5890644/1‑94 (MQ=60)
GCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGT > SRR4302540.6623570/1‑94 (MQ=60)
GCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGT < SRR4302540.2054583/94‑1 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302540.9384395/1‑94 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302540.7854068/1‑94 (MQ=60)
AGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAC > SRR4302540.490972/1‑94 (MQ=60)
CCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCC > SRR4302540.3916101/1‑94 (MQ=60)
CCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAGACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCC < SRR4302540.5308409/94‑1 (MQ=60)
CGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG < SRR4302540.1846828/94‑1 (MQ=60)
CGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG < SRR4302540.5580462/94‑1 (MQ=60)
CGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCG > SRR4302540.3601363/1‑94 (MQ=60)
GCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > SRR4302540.3707679/1‑94 (MQ=60)
CTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCT < SRR4302540.420788/94‑1 (MQ=60)
CTCCCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCT < SRR4302540.7851338/94‑1 (MQ=60)
CGCTTACGGTCAATCCATTATCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTTGAAAAACTTGCCTCTGCGGTAGATACCCGCTTC > SRR4302540.9052693/1‑94 (MQ=60)
GCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAACCTCGCCTCTGCGGTAGATACCCGCTTCT < SRR4302540.1144441/94‑1 (MQ=60)
|
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
