Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,791,298 |
T→C |
T95T (ACA→ACG) |
btuD ← |
ATP‑binding component of vitamin B12 transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,791,298 | 0 | T | C | 100.0%
| 722.3
/ NA
| 222 | T95T (ACA→ACG) | btuD | ATP‑binding component of vitamin B12 transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (104/118); total (104/118) |
Only 100 of 228 total aligned reads displayed.
ATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCA > NC_000913/1791208‑1791387
|
ttGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTc < 2:244871/93‑1 (MQ=255)
tGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCa < 2:2945146/93‑1 (MQ=255)
gCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTa < 2:3375759/93‑1 (MQ=255)
gCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTa < 1:2087483/93‑1 (MQ=255)
cTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAg < 1:1149622/93‑1 (MQ=255)
tACGTCCGGGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt > 2:3202987/1‑93 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt < 1:3036930/93‑1 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt > 2:5263523/1‑93 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt < 2:5978114/93‑1 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt < 2:1479867/93‑1 (MQ=255)
aCGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTg > 2:4897812/1‑93 (MQ=255)
gTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGcc < 1:1754723/93‑1 (MQ=255)
tCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCa > 2:1036941/1‑93 (MQ=255)
tCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCa > 1:250394/1‑93 (MQ=255)
tCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCa > 2:5431717/1‑93 (MQ=255)
tCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCa > 1:401967/1‑93 (MQ=255)
cGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGa < 1:5621662/93‑1 (MQ=255)
gAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAc > 2:3610687/1‑93 (MQ=255)
aGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAcc > 1:4717211/1‑93 (MQ=255)
aGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCCGATGCAGCGTCAGGTAGTGCCAGAcc < 1:2885981/93‑1 (MQ=255)
ttGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGc > 1:3332840/1‑93 (MQ=255)
tcatcaAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGtt > 2:1191989/1‑93 (MQ=255)
tcaAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCa > 2:1507248/1‑93 (MQ=255)
tcaAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCa > 1:5214161/1‑93 (MQ=255)
aaGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaaa < 1:2937497/93‑1 (MQ=255)
aaGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaaa > 2:5867659/1‑93 (MQ=255)
aaGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGGTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGCTGCcaa > 2:4433083/1‑93 (MQ=255)
agagCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAc < 1:5381987/93‑1 (MQ=255)
gagCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcg < 1:3589891/93‑1 (MQ=255)
gCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggc < 2:811929/93‑1 (MQ=255)
gCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggc < 1:3554032/93‑1 (MQ=255)
gCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggc < 1:5536803/93‑1 (MQ=255)
gCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggc < 1:5102567/93‑1 (MQ=255)
cAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggcgg > 1:3967672/1‑93 (MQ=255)
cAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggcgg < 1:5705844/93‑1 (MQ=255)
aGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACggcggc < 2:2036372/93‑1 (MQ=255)
cgcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGt < 2:2498559/93‑1 (MQ=255)
gcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTc > 2:3985428/1‑93 (MQ=255)
gcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTc < 1:6168241/93‑1 (MQ=255)
gcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTc < 1:684554/93‑1 (MQ=255)
cccTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctg > 2:1627601/1‑93 (MQ=255)
cccTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctg > 1:2197874/1‑93 (MQ=255)
ccTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgc > 2:5034444/1‑93 (MQ=255)
ccTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgc > 1:5082683/1‑93 (MQ=255)
cTGCGACATCATTCAGTAGTTCGGTACGCGATTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgct > 2:5074320/1‑93 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg > 1:2604599/1‑93 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg < 2:414001/93‑1 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg > 1:2360460/1‑93 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg > 1:696826/1‑93 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg < 2:2535126/93‑1 (MQ=255)
gCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgt < 2:4253282/93‑1 (MQ=255)
gCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgt > 2:4386278/1‑93 (MQ=255)
gACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgttg > 2:2408739/1‑93 (MQ=255)
gACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgttg < 1:4282402/93‑1 (MQ=255)
aCATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgttgt < 1:192229/93‑1 (MQ=255)
aCATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgttgt < 2:3003551/93‑1 (MQ=255)
catcatTCAGTAGTTCGTTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTtgtg > 2:6302403/1‑93 (MQ=255)
catcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTtgtg < 2:2144300/93‑1 (MQ=255)
catcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTtgtg < 1:4519850/93‑1 (MQ=255)
tcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaa < 1:4739719/93‑1 (MQ=255)
catTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaaa < 2:1436503/93‑1 (MQ=255)
catTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaaa > 2:3342204/1‑93 (MQ=255)
catTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaaa < 2:3311944/93‑1 (MQ=255)
catTCAGTAGTTCAGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaaa > 2:6051532/1‑93 (MQ=255)
cAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATa < 1:1265846/93‑1 (MQ=255)
agtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAg < 2:2993014/93‑1 (MQ=255)
agtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAg > 1:2906268/1‑93 (MQ=255)
agtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAg > 2:5505382/1‑93 (MQ=255)
tagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgc > 2:3850794/1‑93 (MQ=255)
tagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgc < 1:6270712/93‑1 (MQ=255)
agtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgcg > 2:5306193/1‑93 (MQ=255)
gtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgcgc < 2:130480/93‑1 (MQ=255)
ttCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGcgcg > 2:1329739/1‑93 (MQ=255)
ggTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATg > 2:1091118/1‑93 (MQ=255)
gTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGc < 1:4056794/93‑1 (MQ=255)
tACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCa < 2:2249761/93‑1 (MQ=255)
tACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCa > 2:5724687/1‑93 (MQ=255)
tACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCa < 1:3198473/93‑1 (MQ=255)
tACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCa > 1:5891912/1‑93 (MQ=255)
aCGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAg > 2:1420875/1‑93 (MQ=255)
gcgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcg < 1:4229068/93‑1 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg > 1:5555352/1‑93 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg > 1:4332084/1‑93 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGGAAGATAGGCGCGATGCAGcgcgg > 1:4595259/1‑92 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa < 1:3650644/93‑1 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa > 2:5083316/1‑93 (MQ=255)
ttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGt > 1:2697976/1‑93 (MQ=255)
tATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtt > 2:3509679/1‑93 (MQ=255)
tATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtt < 2:986618/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt < 2:5780493/93‑1 (MQ=255)
cGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttg < 2:378113/93‑1 (MQ=255)
gTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgt > 1:4241342/1‑93 (MQ=255)
tGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgtt < 1:387451/93‑1 (MQ=255)
gCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgttg < 2:6132161/93‑1 (MQ=255)
cTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGc < 2:4523241/93‑1 (MQ=255)
cTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGc < 1:316158/93‑1 (MQ=255)
tGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCg > 2:5602011/1‑93 (MQ=255)
tGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCg < 1:4901992/93‑1 (MQ=255)
gCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAcc > 1:157899/1‑93 (MQ=255)
cAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCa < 2:1832997/93‑1 (MQ=255)
|
ATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCA > NC_000913/1791208‑1791387
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > NC_000913/1791206‑1791391
|
TGATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCG < SRR4302533.2863034/94‑1 (MQ=60)
GATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGT > SRR4302533.6318791/1‑94 (MQ=60)
ATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTC < SRR4302533.5919900/94‑1 (MQ=60)
TGGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCA < SRR4302533.4335779/94‑1 (MQ=60)
GGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGG < SRR4302533.4739972/94‑1 (MQ=60)
GGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGG < SRR4302533.5135098/94‑1 (MQ=60)
GTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGT > SRR4302533.3111680/1‑94 (MQ=60)
GCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAG < SRR4302533.2100337/94‑1 (MQ=60)
CTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGT < SRR4302533.1156489/94‑1 (MQ=60)
CTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGT > SRR4302533.4058451/1‑94 (MQ=60)
TACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTG < SRR4302533.3055511/94‑1 (MQ=60)
ACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGC > SRR4302533.5152702/1‑94 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA < SRR4302533.4373643/94‑1 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA > SRR4302533.251938/1‑94 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA > SRR4302533.404390/1‑94 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA < SRR4302533.1765409/94‑1 (MQ=60)
CCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGA > SRR4302533.2577608/1‑94 (MQ=60)
CGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAC < SRR4302533.5655644/94‑1 (MQ=60)
GAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACC > SRR4302533.4745814/1‑94 (MQ=60)
AGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCCGATGCAGCGTCAGGTAGTGCCAGACCG < SRR4302533.2903730/94‑1 (MQ=60)
AGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCCGATGCAGCGTCAGGTAGTGCCAGACCG < SRR4302533.2903729/94‑1 (MQ=60)
GTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGG < SRR4302533.4129390/94‑1 (MQ=60)
TTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGC > SRR4302533.3353434/1‑94 (MQ=60)
TTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCG < SRR4302533.3199860/94‑1 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT > SRR4302533.5947276/1‑94 (MQ=60)
ATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCA > SRR4302533.5245561/1‑94 (MQ=60)
AAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAC < SRR4302533.1766314/94‑1 (MQ=60)
AAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAC < SRR4302533.2955451/94‑1 (MQ=60)
AGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACG < SRR4302533.5414322/94‑1 (MQ=60)
GAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGG < SRR4302533.3611991/94‑1 (MQ=60)
GCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCG < SRR4302533.3575928/94‑1 (MQ=60)
GCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCG < SRR4302533.5570237/94‑1 (MQ=60)
GCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCG < SRR4302533.5133392/94‑1 (MQ=60)
CCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGG > SRR4302533.3991842/1‑94 (MQ=60)
CAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGC < SRR4302533.5740307/94‑1 (MQ=60)
AGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCG > SRR4302533.1780211/1‑94 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT < SRR4302533.688603/94‑1 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT < SRR4302533.6205321/94‑1 (MQ=60)
CCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTG > SRR4302533.1714338/1‑94 (MQ=60)
CCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTG > SRR4302533.2211415/1‑94 (MQ=60)
CCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTG > SRR4302533.2348882/1‑94 (MQ=60)
CCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGC > SRR4302533.3127402/1‑94 (MQ=60)
CCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGC < SRR4302533.2846122/94‑1 (MQ=60)
CCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGC > SRR4302533.5113403/1‑94 (MQ=60)
CCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGC > SRR4302533.3666899/1‑94 (MQ=60)
CCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGC < SRR4302533.4878863/94‑1 (MQ=60)
CTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTG > SRR4302533.700948/1‑94 (MQ=60)
CTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTG > SRR4302533.2375048/1‑94 (MQ=60)
CTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTG > SRR4302533.2620598/1‑94 (MQ=60)
GACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGT > SRR4302533.4448798/1‑94 (MQ=60)
GACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGT < SRR4302533.4308139/94‑1 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG < SRR4302533.3949270/94‑1 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG < SRR4302533.193439/94‑1 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG < SRR4302533.569688/94‑1 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG < SRR4302533.741249/94‑1 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG > SRR4302533.3820507/1‑94 (MQ=60)
ACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTG < SRR4302533.4260813/94‑1 (MQ=60)
CATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGA < SRR4302533.4547221/94‑1 (MQ=60)
CATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGA > SRR4302533.1561782/1‑94 (MQ=60)
TCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAA < SRR4302533.4768458/94‑1 (MQ=60)
CATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAG < SRR4302533.6020467/94‑1 (MQ=60)
CATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAG < SRR4302533.2837389/94‑1 (MQ=60)
ATTCAGTAGTTCGGTACGCGTTTTCTCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGA < SRR4302533.2635420/94‑1 (MQ=60)
ATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGA > SRR4302533.4037057/1‑94 (MQ=60)
TTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGAT < SRR4302533.6277838/94‑1 (MQ=60)
TTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGAT > SRR4302533.4845359/1‑94 (MQ=60)
TCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATA > SRR4302533.3421982/1‑94 (MQ=60)
CAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAG < SRR4302533.1273420/94‑1 (MQ=60)
CAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAG > SRR4302533.2924111/1‑94 (MQ=60)
GTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGC > SRR4302533.3578042/1‑94 (MQ=60)
GTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGC < SRR4302533.2169440/94‑1 (MQ=60)
GTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGC < SRR4302533.412550/94‑1 (MQ=60)
GTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGC < SRR4302533.2385137/94‑1 (MQ=60)
TAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGTCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCG < SRR4302533.4576843/94‑1 (MQ=60)
TAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCG < SRR4302533.6308173/94‑1 (MQ=60)
GTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCG > SRR4302533.4759129/1‑94 (MQ=60)
TCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGAT > SRR4302533.5620053/1‑94 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCA < SRR4302533.4081490/94‑1 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCA > SRR4302533.5927502/1‑94 (MQ=60)
TACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAG < SRR4302533.3218157/94‑1 (MQ=60)
TCGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGC < SRR4302533.2954902/94‑1 (MQ=60)
CGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCG < SRR4302533.5023916/94‑1 (MQ=60)
GCGTTTTATCGTGCTGATGCAGCGTCAGTTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGC > SRR4302533.3320820/1‑94 (MQ=60)
GCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGC < SRR4302533.4254636/94‑1 (MQ=60)
CGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCG > SRR4302533.5588903/1‑94 (MQ=60)
CGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCG < SRR4302533.5496344/94‑1 (MQ=60)
CGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCG > SRR4302533.4358183/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCCGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA > SRR4302533.5259816/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGGAAGATAGGCGCGATGCAGCGCGG > SRR4302533.4623097/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA < SRR4302533.3929989/94‑1 (MQ=60)
TTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAG < SRR4302533.744593/94‑1 (MQ=60)
TTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAG < SRR4302533.3673090/94‑1 (MQ=60)
TTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAG < SRR4302533.1183246/94‑1 (MQ=60)
TTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGT > SRR4302533.2714509/1‑94 (MQ=60)
TATCGTGCTTATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTT < SRR4302533.3471201/94‑1 (MQ=60)
TATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTT < SRR4302533.4293214/94‑1 (MQ=60)
TATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTT < SRR4302533.3046274/94‑1 (MQ=60)
CGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGT < SRR4302533.1990411/94‑1 (MQ=60)
CGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGT > SRR4302533.4266954/1‑94 (MQ=60)
GTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTT < SRR4302533.5126299/94‑1 (MQ=60)
TGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTG > SRR4302533.5580726/1‑94 (MQ=60)
TGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTG < SRR4302533.690282/94‑1 (MQ=60)
TGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTG < SRR4302533.389787/94‑1 (MQ=60)
CTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCG < SRR4302533.318093/94‑1 (MQ=60)
CTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCG < SRR4302533.5624239/94‑1 (MQ=60)
TGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGG > SRR4302533.2503115/1‑94 (MQ=60)
TGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGG < SRR4302533.4931696/94‑1 (MQ=60)
TGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACC > SRR4302533.158905/1‑94 (MQ=60)
CAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCAT > SRR4302533.5181360/1‑94 (MQ=60)
CAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCAT > SRR4302533.3979089/1‑94 (MQ=60)
AGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATG > SRR4302533.5001843/1‑94 (MQ=60)
AGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATG > SRR4302533.1329161/1‑94 (MQ=60)
AGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATG < SRR4302533.5151681/94‑1 (MQ=60)
CGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > SRR4302533.1989908/1‑94 (MQ=60)
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TGATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > NC_000913/1791206‑1791391
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
