Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,815,066 |
T→C |
T32A (ACG→GCG) |
ydjC ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,815,066 | 0 | T | C | 100.0%
| 683.9
/ NA
| 211 | T32A (ACG→GCG) | ydjC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (95/116); total (95/116) |
Only 100 of 216 total aligned reads displayed.
AGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGT > NC_000913/1814976‑1815154
|
aGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGa > 2:1216617/1‑93 (MQ=255)
gTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGAc > 2:4869953/1‑93 (MQ=255)
gTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGAc < 2:2194067/93‑1 (MQ=255)
gCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACaa > 1:517314/1‑93 (MQ=255)
cATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAAt < 1:575020/93‑1 (MQ=255)
cATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAAt < 2:1789191/93‑1 (MQ=255)
aTCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATc < 1:2284356/93‑1 (MQ=255)
tgccTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATcc < 1:4521326/91‑1 (MQ=255)
cccTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATccc > 1:585355/1‑93 (MQ=255)
cccTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATccc < 2:4180111/93‑1 (MQ=255)
ccTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCAATTCACCAGCGCCGTCGTCGACGCGACAATCCCa < 2:5952100/93‑1 (MQ=255)
cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAt > 1:2732073/1‑93 (MQ=255)
cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAt < 1:5606966/93‑1 (MQ=255)
tATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAtt > 2:5395010/1‑93 (MQ=255)
tATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAtt < 1:6222076/93‑1 (MQ=255)
aTGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTg < 1:3257201/93‑1 (MQ=255)
tGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGc < 2:4688183/93‑1 (MQ=255)
tGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCACATTGc > 2:2023366/1‑93 (MQ=255)
ggCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCg > 2:3256271/1‑93 (MQ=255)
ggCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCg < 2:5468334/93‑1 (MQ=255)
ccAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGAc < 2:3558212/93‑1 (MQ=255)
cAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACa < 2:1244583/93‑1 (MQ=255)
aGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAg < 2:231089/93‑1 (MQ=255)
aGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAg > 1:1021529/1‑93 (MQ=255)
gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAgg > 2:2120505/1‑93 (MQ=255)
gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAgg < 1:2689342/93‑1 (MQ=255)
tCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCt > 1:915783/1‑93 (MQ=255)
cGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTc < 1:1090901/93‑1 (MQ=255)
gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGa > 2:1074933/1‑93 (MQ=255)
ttCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGAt < 2:1458309/93‑1 (MQ=255)
ttCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGAt < 1:1264019/93‑1 (MQ=255)
tcatcaCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATa < 1:4935514/93‑1 (MQ=255)
catcaCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATaa > 1:2891112/1‑93 (MQ=255)
catcaCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATaa < 2:3976012/93‑1 (MQ=255)
catcaCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATaa < 2:4057529/93‑1 (MQ=255)
caCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGc < 2:244833/93‑1 (MQ=255)
aCGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGcc > 2:2691591/1‑93 (MQ=255)
gACTCAACTGCACCGCATAGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTAGATAATGCCGt > 1:2623476/1‑93 (MQ=255)
aCTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa < 1:1946481/93‑1 (MQ=255)
cTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAg > 2:6209229/1‑93 (MQ=255)
cTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAg > 1:3577025/1‑93 (MQ=255)
tCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGt < 2:739643/93‑1 (MQ=255)
tCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGt < 1:3111301/93‑1 (MQ=255)
tCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGt > 2:1506022/1‑93 (MQ=255)
tCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGt > 1:345694/1‑93 (MQ=255)
cAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGtt < 1:4431021/93‑1 (MQ=255)
cAACTGAACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGtt > 2:2612847/1‑93 (MQ=255)
aCTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt < 2:874470/93‑1 (MQ=255)
cTGCACCGCATGGTCAATAGCCTGCCCATTCACCCGCGCCGTCGTCGACGCGACAATCACATTGCGACAGGCCTCGATAATGCCGTAGTTCTg > 1:2166518/1‑93 (MQ=255)
tGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGa < 2:2998234/93‑1 (MQ=255)
tcACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAc < 1:558092/92‑1 (MQ=255)
gCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAc > 1:1984712/1‑93 (MQ=255)
cACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAcc < 2:3211794/93‑1 (MQ=255)
ccGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt < 2:3661629/93‑1 (MQ=255)
ccGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt > 1:4565241/1‑93 (MQ=255)
ccGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt < 2:3171453/93‑1 (MQ=255)
cGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCttt > 2:4638716/1‑93 (MQ=255)
cGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCttt > 1:3358811/1‑93 (MQ=255)
cGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCttt < 2:1047179/93‑1 (MQ=255)
gCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTg < 2:4324812/93‑1 (MQ=255)
gCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTg > 1:2546601/1‑93 (MQ=255)
gCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTg < 1:3679980/93‑1 (MQ=255)
tGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCtt > 2:3648830/1‑93 (MQ=255)
tGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATACCGTAGTTCTGACCTTTGCtt > 1:427672/1‑93 (MQ=255)
gTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTaa < 1:727353/93‑1 (MQ=255)
gTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTaa < 2:3420365/93‑1 (MQ=255)
tCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAg > 2:4284886/1‑93 (MQ=255)
tCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAg < 2:4213899/93‑1 (MQ=255)
cAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGc < 1:5529199/93‑1 (MQ=255)
cAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGc < 2:1932752/93‑1 (MQ=255)
cAATAGCCGGCCCATTCACCAGCGCCGGCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGc < 2:1427813/93‑1 (MQ=255)
aTAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCa < 2:5034296/93‑1 (MQ=255)
aTAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCa < 1:170409/93‑1 (MQ=255)
tAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaa > 1:6118279/1‑93 (MQ=255)
aGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaaa < 2:4412733/93‑1 (MQ=255)
gCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaaaa > 2:4520557/1‑93 (MQ=255)
tGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAatca > 2:4715369/1‑93 (MQ=255)
gCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAatcat > 2:4763247/1‑93 (MQ=255)
gCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAatcat < 2:6062409/93‑1 (MQ=255)
cATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCgg > 1:6023567/1‑93 (MQ=255)
cATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCgg < 1:790122/93‑1 (MQ=255)
ttCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCa < 2:1166211/93‑1 (MQ=255)
tCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCAt < 2:3951012/93‑1 (MQ=255)
cccAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTa < 2:2741613/92‑1 (MQ=255)
cAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAAc > 2:379336/1‑93 (MQ=255)
cAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAAc > 1:5695537/1‑93 (MQ=255)
aGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACa > 1:2401698/1‑93 (MQ=255)
gtcgtcGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGt > 1:301521/1‑93 (MQ=255)
gtcgtcGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGt < 1:4036229/93‑1 (MQ=255)
tcgtcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTa < 2:5346251/93‑1 (MQ=255)
cgtcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTaa < 2:5214507/93‑1 (MQ=255)
gtcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAg < 2:491539/93‑1 (MQ=255)
gtcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAg < 2:5703947/93‑1 (MQ=255)
gtcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAg > 1:3220801/1‑93 (MQ=255)
tcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc > 2:5077996/1‑93 (MQ=255)
tcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc > 1:4104240/1‑93 (MQ=255)
tcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc > 1:2963809/1‑93 (MQ=255)
tcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc > 2:3963937/1‑93 (MQ=255)
tcgACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc < 1:5252591/93‑1 (MQ=255)
gACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGt < 2:3387259/93‑1 (MQ=255)
|
AGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGT > NC_000913/1814976‑1815154
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCAT > NC_000913/1814973‑1815159
|
CAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGC < SRR4302533.5952227/94‑1 (MQ=60)
CAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGC > SRR4302533.1834664/1‑94 (MQ=60)
AAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCG < SRR4302533.6284910/94‑1 (MQ=60)
GTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACA < SRR4302533.2580827/94‑1 (MQ=60)
TGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAA > SRR4302533.520387/1‑94 (MQ=60)
CATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATC < SRR4302533.578413/94‑1 (MQ=60)
ATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCC > SRR4302533.1955000/1‑94 (MQ=60)
ATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCC < SRR4302533.2298494/94‑1 (MQ=60)
TGCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCC < SRR4302533.4548702/94‑1 (MQ=60)
TCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCC > SRR4302533.588806/1‑94 (MQ=60)
CCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAT > SRR4302533.929620/1‑94 (MQ=60)
CCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCAT > SRR4302533.2748837/1‑94 (MQ=60)
CTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATT > SRR4302533.5628726/1‑94 (MQ=60)
CTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATT > SRR4302533.2277166/1‑94 (MQ=60)
CTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATT < SRR4302533.5640848/94‑1 (MQ=60)
CTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATACCATT > SRR4302533.3217211/1‑94 (MQ=60)
TATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTG < SRR4302533.41552/94‑1 (MQ=60)
TATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTG < SRR4302533.6259368/94‑1 (MQ=60)
ATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGC < SRR4302533.3277289/94‑1 (MQ=60)
TGGTCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCG < SRR4302533.1050172/94‑1 (MQ=60)
AGGCCAGACTCGTTTCATAACGACTCAACTGCGCCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCG < SRR4302533.4798766/94‑1 (MQ=60)
CAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAG > SRR4302533.1027531/1‑94 (MQ=60)
CAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAG > SRR4302533.2888169/1‑94 (MQ=60)
AGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGG > SRR4302533.3591007/1‑94 (MQ=60)
GACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGC < SRR4302533.2705830/94‑1 (MQ=60)
CTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCT > SRR4302533.921164/1‑94 (MQ=60)
CTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCT > SRR4302533.2969614/1‑94 (MQ=60)
CGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCG < SRR4302533.2297626/94‑1 (MQ=60)
CGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCG < SRR4302533.1097345/94‑1 (MQ=60)
CGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCG < SRR4302533.650589/94‑1 (MQ=60)
GGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGA < SRR4302533.2698666/94‑1 (MQ=60)
TTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATA < SRR4302533.1271584/94‑1 (MQ=60)
TCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAA > SRR4302533.2908881/1‑94 (MQ=60)
TCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAA < SRR4302533.4965401/94‑1 (MQ=60)
TCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAA < SRR4302533.3367992/94‑1 (MQ=60)
TCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGC > SRR4302533.2395609/1‑94 (MQ=60)
TCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGC > SRR4302533.5246328/1‑94 (MQ=60)
CACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCC > SRR4302533.6111946/1‑94 (MQ=60)
ACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCGTTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCG < SRR4302533.5759237/94‑1 (MQ=60)
ACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCG > SRR4302533.564113/1‑94 (MQ=60)
CGACTCAACTGCACCGCATAGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTAGATAATGCCGT > SRR4302533.2639577/1‑94 (MQ=60)
ACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAG < SRR4302533.1958349/94‑1 (MQ=60)
ACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAG > SRR4302533.4593957/1‑94 (MQ=60)
ACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAG > SRR4302533.3599069/1‑94 (MQ=60)
CTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGT > SRR4302533.347806/1‑94 (MQ=60)
TCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTT < SRR4302533.3130426/94‑1 (MQ=60)
CAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTC < SRR4302533.4457808/94‑1 (MQ=60)
CAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTC < SRR4302533.5577868/94‑1 (MQ=60)
AACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCT < SRR4302533.1157368/94‑1 (MQ=60)
AACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCT < SRR4302533.88626/94‑1 (MQ=60)
ACTGCACCGCATGGTCAATAGCCTGCCCATTCACCCGCGCCGTCGTCGACGCGACAATCACATTGCGACAGGCCTCGATAATGCCGTAGTTCTG > SRR4302533.2179844/1‑94 (MQ=60)
ACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTG > SRR4302533.5443023/1‑94 (MQ=60)
CTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGA > SRR4302533.5910948/1‑94 (MQ=60)
TGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAC > SRR4302533.1996854/1‑94 (MQ=60)
TCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACC < SRR4302533.561407/94‑1 (MQ=60)
CACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCT < SRR4302533.5522753/94‑1 (MQ=60)
ACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTT > SRR4302533.4592917/1‑94 (MQ=60)
CCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTT > SRR4302533.3379565/1‑94 (MQ=60)
CGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTG > SRR4302533.204558/1‑94 (MQ=60)
CGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTG > SRR4302533.2562269/1‑94 (MQ=60)
CGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTG > SRR4302533.2846191/1‑94 (MQ=60)
GCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGC < SRR4302533.3702596/94‑1 (MQ=60)
ATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTT > SRR4302533.3022737/1‑94 (MQ=60)
ATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTT > SRR4302533.3092135/1‑94 (MQ=60)
ATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATACCGTAGTTCTGACCTTTGCTT > SRR4302533.430224/1‑94 (MQ=60)
GGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAA < SRR4302533.737892/94‑1 (MQ=60)
GTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAG < SRR4302533.731650/94‑1 (MQ=60)
CAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCC < SRR4302533.4401657/94‑1 (MQ=60)
CAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCC < SRR4302533.4120773/94‑1 (MQ=60)
CAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCC < SRR4302533.5562580/94‑1 (MQ=60)
AATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCA < SRR4302533.4573505/94‑1 (MQ=60)
ATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAA > SRR4302533.6155179/1‑94 (MQ=60)
ATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAA < SRR4302533.171481/94‑1 (MQ=60)
TAGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAA > SRR4302533.6161574/1‑94 (MQ=60)
AGCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAA < SRR4302533.1971098/94‑1 (MQ=60)
GCCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATGGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAAT < SRR4302533.5834242/94‑1 (MQ=60)
CCTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTTCTTAAGCCAAAATC > SRR4302533.2512623/1‑94 (MQ=60)
CTGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCA > SRR4302533.3256952/1‑94 (MQ=60)
TGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCAT > SRR4302533.3690498/1‑94 (MQ=60)
TGCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCAT < SRR4302533.2736194/94‑1 (MQ=60)
GCCCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATC < SRR4302533.3318023/94‑1 (MQ=60)
CCATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGG > SRR4302533.6060070/1‑94 (MQ=60)
CATTCACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGC < SRR4302533.794773/94‑1 (MQ=60)
ACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAA > SRR4302533.514868/1‑94 (MQ=60)
ACCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAA < SRR4302533.5943556/94‑1 (MQ=60)
CCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAAC > SRR4302533.4241533/1‑94 (MQ=60)
CCAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAAC > SRR4302533.5729946/1‑94 (MQ=60)
CAGCGCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACA > SRR4302533.2416531/1‑94 (MQ=60)
GCCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCA > SRR4302533.445964/1‑94 (MQ=60)
CCGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAG < SRR4302533.154788/94‑1 (MQ=60)
CGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGT > SRR4302533.303364/1‑94 (MQ=60)
CGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGT < SRR4302533.3446572/94‑1 (MQ=60)
CGTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGT < SRR4302533.3766293/94‑1 (MQ=60)
GTCGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTA < SRR4302533.4060796/94‑1 (MQ=60)
CGTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAG > SRR4302533.3240661/1‑94 (MQ=60)
GTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGC > SRR4302533.2981927/1‑94 (MQ=60)
GTCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGC > SRR4302533.4129204/1‑94 (MQ=60)
TCGACGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCG < SRR4302533.5284151/94‑1 (MQ=60)
CGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCC > SRR4302533.545388/1‑94 (MQ=60)
CGCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCC > SRR4302533.4977926/1‑94 (MQ=60)
GCGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCA > SRR4302533.2181952/1‑94 (MQ=60)
CGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCAT > SRR4302533.3700158/1‑94 (MQ=60)
CGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCAT < SRR4302533.4734546/94‑1 (MQ=60)
CGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGGTCCAT > SRR4302533.2577400/1‑94 (MQ=60)
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CAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCAT > NC_000913/1814973‑1815159
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
