Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,919,873 |
G→A |
D24N (GAT→AAT) |
b1836 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,919,873 | 0 | G | A | 100.0%
| 750.5
/ NA
| 203 | D24N (GAT→AAT) | b1836 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (94/109); total (94/109) |
Only 100 of 206 total aligned reads displayed.
AGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTG > NC_000913/1919783‑1919962
|
aGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAAt < 2:1639731/93‑1 (MQ=255)
aGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAAt < 1:400147/93‑1 (MQ=255)
gCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATc < 1:805110/93‑1 (MQ=255)
gCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATc > 1:6099788/1‑93 (MQ=255)
tAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGa > 2:3206375/1‑93 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa < 2:717654/93‑1 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa > 2:507570/1‑93 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa > 2:4520063/1‑93 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa < 2:3429223/93‑1 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa < 2:1678534/93‑1 (MQ=255)
aaaTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGaa < 1:4284328/93‑1 (MQ=255)
aTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACg > 2:849559/1‑93 (MQ=255)
aTGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACg < 1:5022573/93‑1 (MQ=255)
tGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGt > 2:5724698/1‑93 (MQ=255)
tGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGt > 1:3007405/1‑93 (MQ=255)
tGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGt > 2:682222/1‑93 (MQ=255)
gagCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAc < 1:4235933/93‑1 (MQ=255)
agCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAGTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAcc > 1:3374707/1‑93 (MQ=255)
agCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAcc < 2:4976039/93‑1 (MQ=255)
agCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAcc > 1:6277289/1‑93 (MQ=255)
gCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAcct > 2:5276664/1‑92 (MQ=255)
gCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCa < 1:2581205/93‑1 (MQ=255)
cACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAt > 2:5502623/1‑93 (MQ=255)
cACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAt < 1:3286248/93‑1 (MQ=255)
aCGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAtt < 1:376077/93‑1 (MQ=255)
aCGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAtt < 2:5212662/93‑1 (MQ=255)
aCGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAtt > 1:4767305/1‑93 (MQ=255)
gAAGATGAAATCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTcc < 2:2034463/93‑1 (MQ=255)
gAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGACTTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTcc > 1:1667012/1‑93 (MQ=255)
aGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCtt > 2:3746147/1‑93 (MQ=255)
gATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTg < 1:3098899/93‑1 (MQ=255)
gATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTg < 1:1265809/93‑1 (MQ=255)
tGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTa > 2:625033/1‑93 (MQ=255)
aaaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAAt > 2:397251/1‑93 (MQ=255)
aaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATc > 2:3304259/1‑93 (MQ=255)
aaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATc < 1:1622789/93‑1 (MQ=255)
aaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATc < 1:191633/93‑1 (MQ=255)
aaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATc < 2:5234863/93‑1 (MQ=255)
ccAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTg > 1:455103/1‑93 (MQ=255)
aGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAc > 1:5748085/1‑93 (MQ=255)
aGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAc < 2:434558/93‑1 (MQ=255)
aGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAc > 2:3093538/1‑93 (MQ=255)
aGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAc < 1:392644/93‑1 (MQ=255)
gtgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAcc > 1:1540344/1‑93 (MQ=255)
tgtgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAccc < 1:1725495/93‑1 (MQ=255)
gtgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAcccc > 2:2138048/1‑93 (MQ=255)
tgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCg < 2:1499526/93‑1 (MQ=255)
tgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCg > 2:2686490/1‑93 (MQ=255)
gcgcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGa < 1:2301395/93‑1 (MQ=255)
gcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAtt > 1:4680586/1‑93 (MQ=255)
gcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAtt < 2:1282583/93‑1 (MQ=255)
aTAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTta < 1:1928551/93‑1 (MQ=255)
aTAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTta > 1:605862/1‑93 (MQ=255)
tAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtat < 2:1351791/93‑1 (MQ=255)
tAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtat > 2:1386971/1‑93 (MQ=255)
aGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtatg < 1:4041408/93‑1 (MQ=255)
ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtatgt > 2:2182986/1‑93 (MQ=255)
ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtatgt > 1:6287702/1‑93 (MQ=255)
ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtatgt < 1:2987108/93‑1 (MQ=255)
cgcTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtatgtat < 1:2754526/93‑1 (MQ=255)
ttttGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGCAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCa > 1:4445247/1‑93 (MQ=255)
ttGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAAc < 1:370618/93‑1 (MQ=255)
aaaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTgg > 2:3268233/1‑93 (MQ=255)
aaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGa > 2:1892838/1‑93 (MQ=255)
aaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGa < 2:2304649/93‑1 (MQ=255)
aaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGa < 1:548620/93‑1 (MQ=255)
gacgacGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGcc < 2:1758773/93‑1 (MQ=255)
cgacgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTg < 1:2450420/93‑1 (MQ=255)
gacgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTgg < 2:3573396/93‑1 (MQ=255)
acgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTggg < 1:5184676/93‑1 (MQ=255)
cgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGa < 1:1090139/93‑1 (MQ=255)
cgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGa > 1:4014465/1‑93 (MQ=255)
cgGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGa > 1:4610336/1‑93 (MQ=255)
ggCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAt > 1:6075560/1‑93 (MQ=255)
ggCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAt > 1:5902111/1‑93 (MQ=255)
gAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCt < 2:1209798/93‑1 (MQ=255)
ttACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGaa > 1:483042/1‑93 (MQ=255)
acacGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAAc < 2:5365297/93‑1 (MQ=255)
cacGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAAcc < 2:4311476/93‑1 (MQ=255)
cacGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAAcc > 1:5621581/1‑93 (MQ=255)
acGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCa > 2:3783432/1‑93 (MQ=255)
acGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCa < 2:5078709/93‑1 (MQ=255)
cGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAg < 2:2575007/93‑1 (MQ=255)
ggTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGt < 2:604177/93‑1 (MQ=255)
gTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTa < 1:3844426/93‑1 (MQ=255)
gTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTa < 1:52349/93‑1 (MQ=255)
gTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTa > 2:1455262/1‑93 (MQ=255)
tGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTTACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTAt > 1:4791051/1‑93 (MQ=255)
gAATCGCCAGGGAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATc < 1:2476369/93‑1 (MQ=255)
aaTCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATcc > 2:3515593/1‑93 (MQ=255)
aTCGCCAGGTAATCGATCGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccc < 1:4372384/93‑1 (MQ=255)
aTCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccc < 1:209791/93‑1 (MQ=255)
aTCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccc < 1:4877442/93‑1 (MQ=255)
aTCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCCGAAACCAGTATccc < 2:3851789/93‑1 (MQ=255)
tCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccct < 2:1129423/93‑1 (MQ=255)
cGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctg < 2:5563171/93‑1 (MQ=255)
cAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctgccc > 1:1293261/1‑93 (MQ=255)
aGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctgccct > 2:2801104/1‑93 (MQ=255)
ggTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctgccctg < 2:5844260/93‑1 (MQ=255)
ggTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctgccctg > 2:1802253/1‑93 (MQ=255)
|
AGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTG > NC_000913/1919783‑1919962
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTA > NC_000913/1919782‑1919965
|
CAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAAT < SRR4302533.1276806/94‑1 (MQ=60)
AGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATC < SRR4302533.402562/94‑1 (MQ=60)
AGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATC > SRR4302533.6136625/1‑94 (MQ=60)
GCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCG < SRR4302533.809841/94‑1 (MQ=60)
GCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCG < SRR4302533.3010766/94‑1 (MQ=60)
TAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAA > SRR4302533.3985583/1‑94 (MQ=60)
AAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAAC < SRR4302533.4310075/94‑1 (MQ=60)
AAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAAC > SRR4302533.4726403/1‑94 (MQ=60)
AATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACG < SRR4302533.1365167/94‑1 (MQ=60)
AATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACG > SRR4302533.4839932/1‑94 (MQ=60)
ATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGT < SRR4302533.5052989/94‑1 (MQ=60)
ATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGT > SRR4302533.3025803/1‑94 (MQ=60)
AGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAC > SRR4302533.1196542/1‑94 (MQ=60)
AGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAAC > SRR4302533.790319/1‑94 (MQ=60)
GAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAGTCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACC > SRR4302533.3395544/1‑94 (MQ=60)
GAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACC < SRR4302533.4261522/94‑1 (MQ=60)
GAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACC > SRR4302533.6314769/1‑94 (MQ=60)
GCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCAT < SRR4302533.2597084/94‑1 (MQ=60)
CACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATT < SRR4302533.3306536/94‑1 (MQ=60)
CACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATT > SRR4302533.4796206/1‑94 (MQ=60)
ACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTC < SRR4302533.378347/94‑1 (MQ=60)
CGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGACTTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCC > SRR4302533.1677083/1‑94 (MQ=60)
CGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCC > SRR4302533.3211552/1‑94 (MQ=60)
GAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCT < SRR4302533.2221742/94‑1 (MQ=60)
AAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTT < SRR4302533.3811324/94‑1 (MQ=60)
AGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTG > SRR4302533.3892087/1‑94 (MQ=60)
GATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGT < SRR4302533.1273383/94‑1 (MQ=60)
GATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGT < SRR4302533.3117951/94‑1 (MQ=60)
GATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGT < SRR4302533.4025866/94‑1 (MQ=60)
ATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTA < SRR4302533.6019297/94‑1 (MQ=60)
TGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAA < SRR4302533.4418543/94‑1 (MQ=60)
AACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCT < SRR4302533.2747535/94‑1 (MQ=60)
AACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCT < SRR4302533.1632620/94‑1 (MQ=60)
AACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCT > SRR4302533.4198078/1‑94 (MQ=60)
AACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCT < SRR4302533.192839/94‑1 (MQ=60)
ACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTG > SRR4302533.457824/1‑94 (MQ=60)
CCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGGAATCGAACGTTATCCATTCCTTGTAAATCTGA > SRR4302533.4815515/1‑94 (MQ=60)
CAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAC > SRR4302533.1564786/1‑94 (MQ=60)
CAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAC > SRR4302533.5782762/1‑94 (MQ=60)
CAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGAC > SRR4302533.4819208/1‑94 (MQ=60)
AGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACC < SRR4302533.3061462/94‑1 (MQ=60)
AGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACC > SRR4302533.1549622/1‑94 (MQ=60)
AGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACC < SRR4302533.395026/94‑1 (MQ=60)
AGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACC < SRR4302533.2481295/94‑1 (MQ=60)
GTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCC < SRR4302533.6283100/94‑1 (MQ=60)
TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCC < SRR4302533.1735965/94‑1 (MQ=60)
GCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAT < SRR4302533.2315658/94‑1 (MQ=60)
CGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATT > SRR4302533.4498628/1‑94 (MQ=60)
CGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATT > SRR4302533.4708949/1‑94 (MQ=60)
CATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTA > SRR4302533.609424/1‑94 (MQ=60)
ATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTAT > SRR4302533.4880669/1‑94 (MQ=60)
ATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTAT > SRR4302533.6323362/1‑94 (MQ=60)
ATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTAT < SRR4302533.1940320/94‑1 (MQ=60)
TAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATG > SRR4302533.6099990/1‑94 (MQ=60)
TAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGNGAATCGCCAGGTAATCGAACGTTAANCATTCCTTGTNAATCTNCNCCNGNTNTNTG > SRR4302533.318715/1‑94 (MQ=60)
AGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGT > SRR4302533.5238893/1‑94 (MQ=60)
AGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGT < SRR4302533.4066004/94‑1 (MQ=60)
AGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGT > SRR4302533.6325212/1‑94 (MQ=60)
AGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGT < SRR4302533.2413956/94‑1 (MQ=60)
AGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGT > SRR4302533.1977673/1‑94 (MQ=60)
GGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTA < SRR4302533.6347730/94‑1 (MQ=60)
GGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTA < SRR4302533.3005381/94‑1 (MQ=60)
GCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTAT > SRR4302533.4000171/1‑94 (MQ=60)
GCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTAT < SRR4302533.1929437/94‑1 (MQ=60)
CGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATG < SRR4302533.2771417/94‑1 (MQ=60)
GCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGC < SRR4302533.6116264/94‑1 (MQ=60)
GCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATATGACCCCGATTTATGTATGC > SRR4302533.3068436/1‑94 (MQ=60)
CTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGCAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCA > SRR4302533.4472134/1‑94 (MQ=60)
CTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGACAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCA > SRR4302533.5207052/1‑94 (MQ=60)
CTTTTGAAATCGACGACGGCGAATTACACGGGGAATCGCCAGGCAATCGAACGTTAACCATTCCTTGTAAATCTCACCCCAATTTATGTATGCA > SRR4302533.832857/1‑94 (MQ=60)
TTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAA < SRR4302533.5677664/94‑1 (MQ=60)
TTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACT < SRR4302533.372856/94‑1 (MQ=60)
AATCGACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGAT < SRR4302533.551875/94‑1 (MQ=60)
GACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCT < SRR4302533.4286312/94‑1 (MQ=60)
GACGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCT < SRR4302533.4048866/94‑1 (MQ=60)
CGACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGG < SRR4302533.2465544/94‑1 (MQ=60)
GACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGG < SRR4302533.5602063/94‑1 (MQ=60)
ACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGA > SRR4302533.4638257/1‑94 (MQ=60)
ACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGA > SRR4302533.5000191/1‑94 (MQ=60)
ACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGA > SRR4302533.4038913/1‑94 (MQ=60)
ACGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGA < SRR4302533.5215975/94‑1 (MQ=60)
CGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAT < SRR4302533.1096580/94‑1 (MQ=60)
CGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAT > SRR4302533.6112309/1‑94 (MQ=60)
CGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAT > SRR4302533.5937752/1‑94 (MQ=60)
CGGCGAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGAT < SRR4302533.5280103/94‑1 (MQ=60)
GAATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTG < SRR4302533.1707014/94‑1 (MQ=60)
ATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAA < SRR4302533.1895370/94‑1 (MQ=60)
ATTACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAA > SRR4302533.485925/1‑94 (MQ=60)
ACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACC > SRR4302533.4596738/1‑94 (MQ=60)
ACACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACC > SRR4302533.5655562/1‑94 (MQ=60)
CACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCA > SRR4302533.373301/1‑94 (MQ=60)
CACGGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCA > SRR4302533.3352974/1‑94 (MQ=60)
GGTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTA < SRR4302533.2858381/94‑1 (MQ=60)
GTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTTACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTAT > SRR4302533.4820078/1‑94 (MQ=60)
GTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTAT < SRR4302533.3867905/94‑1 (MQ=60)
GTGAATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTAT < SRR4302533.52703/94‑1 (MQ=60)
GAATCGCCAGGGAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCC < SRR4302533.2491642/94‑1 (MQ=60)
ATCGCCAGGTAATCGATCGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT < SRR4302533.4398775/94‑1 (MQ=60)
ATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT > SRR4302533.2516558/1‑94 (MQ=60)
ATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT < SRR4302533.211116/94‑1 (MQ=60)
ATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT < SRR4302533.4784392/94‑1 (MQ=60)
ATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT < SRR4302533.4906992/94‑1 (MQ=60)
ATCGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCT < SRR4302533.578737/94‑1 (MQ=60)
CGCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGC < SRR4302533.437455/94‑1 (MQ=60)
GCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCC > SRR4302533.1670452/1‑94 (MQ=60)
GCCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCC > SRR4302533.1273535/1‑94 (MQ=60)
CCAGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCC > SRR4302533.1301051/1‑94 (MQ=60)
AGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTG > SRR4302533.361304/1‑94 (MQ=60)
AGGTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTG > SRR4302533.469724/1‑94 (MQ=60)
GTAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCT < SRR4302533.50935/94‑1 (MQ=60)
TAATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTA > SRR4302533.5523801/1‑94 (MQ=60)
|
CAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTA > NC_000913/1919782‑1919965
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
