Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,938,811 |
T→C |
G262G (GGA→GGG) |
yebA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,938,811 | 0 | T | C | 100.0%
| 643.4
/ NA
| 200 | G262G (GGA→GGG) | yebA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/104); total (96/104) |
Only 100 of 205 total aligned reads displayed.
TGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938721‑1938900
|
tggtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAccc < 2:320404/93‑1 (MQ=255)
ggtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCt < 2:1154544/93‑1 (MQ=255)
gtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCtt < 2:5177626/93‑1 (MQ=255)
gtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCtt < 1:4747685/93‑1 (MQ=255)
tgCAACGCGACGGGTCGCCGGATGAGTACGACGCGTTTTAAAATTAGTCGAGATACGGAACTGTTTCTCCGTCGGGAATCGCAAGAACCCttt < 1:433606/93‑1 (MQ=255)
tgCAACGCGACCGGTCTCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCttt < 2:202151/93‑1 (MQ=255)
tgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCttt < 1:1043110/93‑1 (MQ=255)
cAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATCCGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCg < 2:4544135/93‑1 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc < 2:2536144/93‑1 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc > 1:4984256/1‑93 (MQ=255)
cgcgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCa < 2:1509163/93‑1 (MQ=255)
gcgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAg < 1:5229861/93‑1 (MQ=255)
cgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGa < 1:4363292/93‑1 (MQ=255)
cgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGa > 2:5767273/1‑93 (MQ=255)
cgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGa > 2:4865467/1‑93 (MQ=255)
gACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAc > 2:3024168/1‑93 (MQ=255)
aCCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAcc > 2:2877702/1‑93 (MQ=255)
ccGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCa < 1:5601501/93‑1 (MQ=255)
ccGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCa > 1:1353675/1‑93 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 2:4233311/93‑1 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 2:2954490/93‑1 (MQ=255)
tCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAc > 2:5032122/1‑93 (MQ=255)
aCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCg > 2:5693113/1‑93 (MQ=255)
aCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCg > 1:4612113/1‑93 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt > 2:4702692/1‑93 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt < 1:1818093/93‑1 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt < 2:6277241/93‑1 (MQ=255)
ggATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTa < 1:2220814/93‑1 (MQ=255)
gATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAc > 1:3479257/1‑93 (MQ=255)
gATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAc > 1:4517821/1‑93 (MQ=255)
ttAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGa < 2:2851622/93‑1 (MQ=255)
aGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATc < 1:6193499/93‑1 (MQ=255)
gacgacgCGGGTTAAAATTAGACGAGATACGCAGCTGCTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGTCCAGTACCGTTACGATCGt < 1:1291069/92‑1 (MQ=255)
acgacgCGTGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTa < 2:707076/93‑1 (MQ=255)
acgacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTa < 1:2745035/93‑1 (MQ=255)
acgacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTa > 1:1156020/1‑93 (MQ=255)
gacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGTCGTCGGGAATCGCAAGAACCCTTTCGTCAGAGCAGTACCGTTACGATTGTAGa > 2:1819442/1‑93 (MQ=255)
gacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGa < 2:918335/93‑1 (MQ=255)
gcgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAtt < 1:2403693/93‑1 (MQ=255)
gcgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAtt < 2:1094811/93‑1 (MQ=255)
cgGGTTAAAATTAGACGAGATAGGGACCTGTTTGGCCGCCGGGAATGCCAGGAACCCTTTCGCC‑GACCAGGAACCGTACGGTCGTAGAAattt > 2:1225713/1‑92 (MQ=255)
cgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAttt < 1:6102545/93‑1 (MQ=255)
cgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAttt > 1:4120171/1‑93 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc < 1:5732831/93‑1 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc < 1:2510322/93‑1 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc > 2:3936268/1‑93 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc < 2:3375808/93‑1 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc > 2:129716/1‑93 (MQ=255)
gTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGcc < 2:2187601/93‑1 (MQ=255)
gTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGcc < 1:4465741/93‑1 (MQ=255)
tAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCAt < 1:6010337/93‑1 (MQ=255)
aaaaTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATc < 2:3230927/93‑1 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc < 2:2068750/93‑1 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc < 1:823657/93‑1 (MQ=255)
ttAGACGAGAGACGGAACTGTGCCGCCCTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCa < 2:4510512/93‑1 (MQ=255)
tAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAg > 2:3756244/1‑93 (MQ=255)
tAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAg > 1:4102558/1‑93 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 2:531330/93‑1 (MQ=255)
aCGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcgc > 1:2639164/1‑93 (MQ=255)
agaTACGTAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGa < 2:1367260/93‑1 (MQ=255)
agaTACGGAACTGTTTCGCGGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGcgcgca < 2:3973494/93‑3 (MQ=255)
gaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAt > 1:3920898/1‑93 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa < 1:1657662/93‑1 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa < 1:1609656/93‑1 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa > 1:5175144/1‑93 (MQ=255)
tACGGAGCTGTTTCGCCTTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAg < 2:795709/93‑1 (MQ=255)
tACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTTCCATCTTCAGCGCGGATAg > 1:5492328/1‑93 (MQ=255)
tACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAg > 1:3222539/1‑93 (MQ=255)
aCGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGc < 1:4379335/93‑1 (MQ=255)
cGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCg < 2:5807682/93‑1 (MQ=255)
ggAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGt < 2:1004868/93‑1 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 2:2126801/1‑93 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 2:1778618/1‑93 (MQ=255)
cTGTTTCGCCGTCGGGAATAGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaata > 2:6110022/1‑93 (MQ=255)
tGTTTCGCCGTCGTGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa < 1:5889824/93‑1 (MQ=255)
tGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa > 2:691168/1‑93 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATc > 1:520242/1‑93 (MQ=255)
tCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt > 1:936186/1‑93 (MQ=255)
gCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTa < 2:2457096/93‑1 (MQ=255)
ccGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAc < 2:592044/93‑1 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATTGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc > 1:3060217/1‑93 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc > 1:543403/1‑93 (MQ=255)
gTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCt > 1:30827/1‑93 (MQ=255)
tCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCtt > 2:2412902/1‑93 (MQ=255)
gcGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCtt < 2:1720971/92‑1 (MQ=255)
cGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTc < 2:5643055/93‑1 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 1:2589962/1‑93 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 2:6267233/1‑93 (MQ=255)
ggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCACCGCGGATAGCGTAATAATCTTTACCTTCTg > 2:846236/1‑93 (MQ=255)
gAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGa < 1:2853713/93‑1 (MQ=255)
gAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGa < 2:3444054/93‑1 (MQ=255)
gAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGa > 1:138006/1‑93 (MQ=255)
aTCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAc > 2:3257929/1‑93 (MQ=255)
cAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaa < 2:553787/93‑1 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 2:352387/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 2:3059869/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 1:4314680/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGCACCGTTACGATCGTAGAATTTGCCACCTTCAGCGCGGATAGCGTATTAATCTTTACCTTCTGAACGCaaa > 2:4054875/1‑93 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg > 1:3448227/1‑93 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg < 1:4800928/93‑1 (MQ=255)
|
TGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938721‑1938900
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > NC_000913/1938718‑1938904
|
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAC < SRR4302533.3198749/94‑1 (MQ=60)
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAC < SRR4302533.3877852/94‑1 (MQ=60)
GTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCC < SRR4302533.221819/94‑1 (MQ=60)
GTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTT < SRR4302533.259435/94‑1 (MQ=60)
GTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTT < SRR4302533.4776466/94‑1 (MQ=60)
TGCAACGCGACGGGTCGCCGGATGAGTACGACGCGTTTTAAAATTAGTCGAGATACGGAACTGTTTCTCCGTCGGGAATCGCAAGAACCCTTTC < SRR4302533.436191/94‑1 (MQ=60)
TGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTC < SRR4302533.1049244/94‑1 (MQ=60)
TGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTC < SRR4302533.5872688/94‑1 (MQ=60)
CAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGC > SRR4302533.1380702/1‑94 (MQ=60)
AACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCC > SRR4302533.5014475/1‑94 (MQ=60)
GCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGA < SRR4302533.5261321/94‑1 (MQ=60)
GCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGA < SRR4302533.1657154/94‑1 (MQ=60)
CGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAC < SRR4302533.4389630/94‑1 (MQ=60)
ACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCA > SRR4302533.1361814/1‑94 (MQ=60)
CCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG > SRR4302533.5641806/1‑94 (MQ=60)
CCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG < SRR4302533.5635349/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302533.1697662/94‑1 (MQ=60)
GTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAC < SRR4302533.1238027/94‑1 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG > SRR4302533.4402298/1‑94 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG > SRR4302533.4640056/1‑94 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG > SRR4302533.6094901/1‑94 (MQ=60)
ACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGT < SRR4302533.3621652/94‑1 (MQ=60)
CCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTT < SRR4302533.1829199/94‑1 (MQ=60)
CGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTA < SRR4302533.538330/94‑1 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC > SRR4302533.4545180/1‑94 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC > SRR4302533.3500724/1‑94 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC < SRR4302533.1108839/94‑1 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC < SRR4302533.2234523/94‑1 (MQ=60)
AGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCG > SRR4302533.151982/1‑94 (MQ=60)
AGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCG < SRR4302533.6230664/94‑1 (MQ=60)
GTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATaga > SRR4302533.519321/1‑91 (MQ=60)
TACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTA > SRR4302533.1162952/1‑94 (MQ=60)
GACGACGCGGGTTAAAATTAGACGAGATACGCAGCTGCTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGTCCAGTACCGTTACGATCGTA < SRR4302533.1298848/94‑1 (MQ=60)
ACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAG < SRR4302533.2761862/94‑1 (MQ=60)
CGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATT > SRR4302533.6165845/1‑94 (MQ=60)
CGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATT > SRR4302533.8971/1‑94 (MQ=60)
GCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTT < SRR4302533.2418538/94‑1 (MQ=60)
GCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTT > SRR4302533.4145191/1‑94 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG < SRR4302533.6139386/94‑1 (MQ=60)
GGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGC > SRR4302533.3483150/1‑94 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCC < SRR4302533.5863132/94‑1 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCC < SRR4302533.2525792/94‑1 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCC < SRR4302533.5976280/94‑1 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCC < SRR4302533.5767443/94‑1 (MQ=60)
GTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCA < SRR4302533.4492751/94‑1 (MQ=60)
TAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATC < SRR4302533.6046750/94‑1 (MQ=60)
ATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCA < SRR4302533.828489/94‑1 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG > SRR4302533.4127520/1‑94 (MQ=60)
GACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGC < SRR4302533.521132/94‑1 (MQ=60)
GACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGC > SRR4302533.2655386/1‑94 (MQ=60)
ACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCG < SRR4302533.4456155/94‑1 (MQ=60)
ACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCG > SRR4302533.264221/1‑94 (MQ=60)
ACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCG < SRR4302533.5558157/94‑1 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT > SRR4302533.3944842/1‑94 (MQ=60)
GATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATA > SRR4302533.5206403/1‑94 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTTCCATCTTCAGCGCGGATAG > SRR4302533.5525456/1‑94 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG < SRR4302533.1667694/94‑1 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG < SRR4302533.1619417/94‑1 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG > SRR4302533.3242412/1‑94 (MQ=60)
TACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTCTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGC < SRR4302533.4303237/94‑1 (MQ=60)
ACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCG < SRR4302533.4405775/94‑1 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302533.523581/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302533.3136621/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302533.472782/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302533.350265/1‑94 (MQ=60)
ACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATA < SRR4302533.2016900/94‑1 (MQ=60)
TGTTTCGCCGTCGTGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAAT < SRR4302533.5925406/94‑1 (MQ=60)
GTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATC > SRR4302533.1361274/1‑94 (MQ=60)
GTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATC > SRR4302533.523330/1‑94 (MQ=60)
TTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCT > SRR4302533.4625850/1‑94 (MQ=60)
TTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTT > SRR4302533.941684/1‑94 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA > SRR4302533.4880391/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATTGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302533.3078998/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC < SRR4302533.2287632/94‑1 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302533.546629/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302533.4347853/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302533.2854196/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302533.4512532/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302533.3431380/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302533.31039/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302533.3096040/1‑94 (MQ=60)
TCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTC < SRR4302533.4133454/94‑1 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT > SRR4302533.2605880/1‑94 (MQ=60)
GGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGA > SRR4302533.138881/1‑94 (MQ=60)
GGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGA > SRR4302533.4785423/1‑94 (MQ=60)
GGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGA > SRR4302533.6288128/1‑94 (MQ=60)
GAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAA < SRR4302533.945100/94‑1 (MQ=60)
GAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAA > SRR4302533.5496673/1‑94 (MQ=60)
GAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAA < SRR4302533.2871270/94‑1 (MQ=60)
AATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAC > SRR4302533.3950800/1‑94 (MQ=60)
TCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGC > SRR4302533.2682669/1‑94 (MQ=60)
GCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAA < SRR4302533.2519076/94‑1 (MQ=60)
CAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAA > SRR4302533.4340657/1‑94 (MQ=60)
AAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAC < SRR4302533.3040724/94‑1 (MQ=60)
AGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > SRR4302533.4369254/1‑94 (MQ=60)
AGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > SRR4302533.3469518/1‑94 (MQ=60)
GAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGT < SRR4302533.4830008/94‑1 (MQ=60)
GAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGT > SRR4302533.3090275/1‑94 (MQ=60)
AACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTA < SRR4302533.4151426/94‑1 (MQ=60)
AACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTA > SRR4302533.3826272/1‑94 (MQ=60)
ACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC > SRR4302533.926975/1‑94 (MQ=60)
CCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG < SRR4302533.4838906/94‑1 (MQ=60)
CCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > SRR4302533.5997947/1‑94 (MQ=60)
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GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > NC_000913/1938718‑1938904
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
