Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,957,451 |
T→C |
L140L (CTA→CTG) |
b1875 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,957,451 | 0 | T | C | 100.0%
| 604.0
/ NA
| 186 | L140L (CTA→CTG) | b1875 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (88/98); total (88/98) |
Only 100 of 190 total aligned reads displayed.
AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA > NC_000913/1957361‑1957540
|
aGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAg < 1:3419900/93‑1 (MQ=255)
gttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAgg < 2:1903119/93‑1 (MQ=255)
ttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGc < 1:477680/93‑1 (MQ=255)
ttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGc < 2:3955545/93‑1 (MQ=255)
tgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCt > 2:2541243/1‑93 (MQ=255)
ttGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCAGGCAGGCTGAGt > 2:1451828/1‑93 (MQ=255)
gCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTcc < 2:5202231/93‑1 (MQ=255)
cATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCtt > 1:4786768/1‑93 (MQ=255)
aTCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtc > 2:3207719/1‑93 (MQ=255)
tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca > 1:4492763/1‑93 (MQ=255)
tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca > 2:1138441/1‑93 (MQ=255)
tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca < 1:2694225/93‑1 (MQ=255)
cGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcat < 1:3085220/93‑1 (MQ=255)
ggTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcatc > 1:10506/1‑93 (MQ=255)
ggTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcatc < 1:6169997/93‑1 (MQ=255)
ggTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcatc < 2:133790/93‑1 (MQ=255)
ggTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcatc < 1:2451575/93‑1 (MQ=255)
tGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAg > 2:5294933/1‑93 (MQ=255)
gACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGa < 2:2736815/93‑1 (MQ=255)
cGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAg > 1:1562966/1‑93 (MQ=255)
cGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAg < 1:3859516/93‑1 (MQ=255)
cGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAg > 1:2091204/1‑93 (MQ=255)
gCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAga > 1:2931205/1‑92 (MQ=255)
gCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGc < 1:283045/93‑1 (MQ=255)
gCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGc < 1:4085588/93‑1 (MQ=255)
gCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGc < 2:2196316/93‑1 (MQ=255)
ccAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCa < 2:4413047/93‑1 (MQ=255)
ccAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCa < 1:2105337/93‑1 (MQ=255)
cAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCaa > 2:6071834/1‑93 (MQ=255)
cAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCaa < 2:4112520/93‑1 (MQ=255)
aGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAAt > 2:3019435/1‑93 (MQ=255)
gCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATg > 1:1653565/1‑93 (MQ=255)
gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGcc < 2:4724523/93‑1 (MQ=255)
tCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCa > 1:3359230/1‑93 (MQ=255)
cGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAg < 1:1358736/93‑1 (MQ=255)
ggATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgc < 2:1551838/93‑1 (MQ=255)
ggATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgc < 1:4578790/93‑1 (MQ=255)
gATTCGGTAATCGCTCATGCTCACCTTTTGGCGGACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg > 2:5359715/1‑93 (MQ=255)
gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg > 1:6100809/1‑93 (MQ=255)
gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg > 2:1792242/1‑93 (MQ=255)
ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCa > 1:2337389/1‑93 (MQ=255)
ggTAATCGCTCGTGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACgg < 2:533855/93‑1 (MQ=255)
ggTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACgg > 1:5253867/1‑93 (MQ=255)
ggTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACgg < 1:5789531/93‑1 (MQ=255)
gTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACggg > 1:5437009/1‑93 (MQ=255)
tAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGc > 2:148260/1‑93 (MQ=255)
aaTCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCa > 1:2618119/1‑93 (MQ=255)
aTCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCAt > 2:4465982/1‑93 (MQ=255)
tCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCAtt > 1:2006349/1‑93 (MQ=255)
cGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTc < 2:6220182/93‑1 (MQ=255)
cGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTc > 1:715681/1‑93 (MQ=255)
cGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTc < 1:4919028/93‑1 (MQ=255)
cTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAg < 1:4662954/93‑1 (MQ=255)
cTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAg > 2:2354105/1‑93 (MQ=255)
tCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGc < 1:5218365/93‑1 (MQ=255)
aTGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGt > 2:630085/1‑93 (MQ=255)
gCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAACGCACGGGCATTCAGCGttt > 1:3697382/1‑93 (MQ=255)
cTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTc < 2:769086/93‑1 (MQ=255)
cTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTc < 1:3783442/93‑1 (MQ=255)
cACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTg > 1:5660188/1‑93 (MQ=255)
cACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTg < 1:2060130/93‑1 (MQ=255)
cACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTg < 2:260774/93‑1 (MQ=255)
aCCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTgg < 1:5368278/93‑1 (MQ=255)
aCCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTgg > 1:4128681/1‑93 (MQ=255)
aCCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTgg > 2:4935697/1‑93 (MQ=255)
ccTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGa > 1:5126774/1‑93 (MQ=255)
ccTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGa < 2:591774/93‑1 (MQ=255)
cTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGAt < 1:3945531/93‑1 (MQ=255)
ttttGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATc < 2:4048227/93‑1 (MQ=255)
tttGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCa < 2:6168763/93‑1 (MQ=255)
ggCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCAccc > 2:1750924/1‑93 (MQ=255)
ggCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCAccc > 1:1774654/1‑93 (MQ=255)
ggCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCAccc < 1:3456780/93‑1 (MQ=255)
gCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCg < 2:4500057/93‑1 (MQ=255)
cGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACTCgg > 1:913246/1‑93 (MQ=255)
gAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGc > 2:1189218/1‑93 (MQ=255)
gAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGc > 1:2183942/1‑93 (MQ=255)
aaCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCa < 2:3244263/93‑1 (MQ=255)
aaCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCa < 2:340132/93‑1 (MQ=255)
aaCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCa > 2:3574779/1‑93 (MQ=255)
aCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAg < 2:1961399/93‑1 (MQ=255)
tGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGaa < 2:1779606/93‑1 (MQ=255)
tGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGaa > 1:3568860/1‑93 (MQ=255)
tGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGaa < 2:4120147/93‑1 (MQ=255)
ggTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAAc > 1:5931563/1‑93 (MQ=255)
ttttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGa > 1:3293324/1‑93 (MQ=255)
cACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTc < 1:2254426/93‑1 (MQ=255)
cACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTc < 2:4633553/93‑1 (MQ=255)
aCTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCa < 2:2646400/93‑1 (MQ=255)
gagaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAata > 2:1980964/1‑93 (MQ=255)
agaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAatat < 1:1100432/93‑1 (MQ=255)
agaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAatat > 1:2965005/1‑93 (MQ=255)
gaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATg > 1:4031553/1‑93 (MQ=255)
aTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGt < 1:1018250/93‑1 (MQ=255)
aTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGt < 2:297999/93‑1 (MQ=255)
tCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGtt < 1:4216156/93‑1 (MQ=255)
ccccGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTc > 1:2404146/1‑93 (MQ=255)
cccGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc > 2:5460399/1‑93 (MQ=255)
cccGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc < 2:5770513/93‑1 (MQ=255)
ccGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTccc < 1:4895495/93‑1 (MQ=255)
|
AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA > NC_000913/1957361‑1957540
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCT > NC_000913/1957358‑1957544
|
AATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGC > SRR4302533.4863870/1‑94 (MQ=60)
ATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTAGCGAACTGGTTTTCACTGAGATCCCCGGCA > SRR4302533.5380626/1‑94 (MQ=60)
AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGG < SRR4302533.3441031/94‑1 (MQ=60)
AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGG > SRR4302533.3298011/1‑94 (MQ=60)
TTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCT < SRR4302533.480530/94‑1 (MQ=60)
GTGTTTTGCCATCGGTAACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCT < SRR4302533.3741539/94‑1 (MQ=60)
GTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGA > SRR4302533.5267089/1‑94 (MQ=60)
TTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAG < SRR4302533.2911457/94‑1 (MQ=60)
GCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCT < SRR4302533.4620713/94‑1 (MQ=60)
CCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTT > SRR4302533.4815757/1‑94 (MQ=60)
CCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTT > SRR4302533.3868018/1‑94 (MQ=60)
CCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCCAACTGGTTTTCACTGAGCTCCCCGGCAGGCTGAGTCCTT > SRR4302533.4516136/1‑94 (MQ=60)
CATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTC > SRR4302533.27690/1‑94 (MQ=60)
ATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCA > SRR4302533.6024166/1‑94 (MQ=60)
ATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCA < SRR4302533.2381872/94‑1 (MQ=60)
ATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCA > SRR4302533.4519974/1‑94 (MQ=60)
TCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCAT < SRR4302533.2710734/94‑1 (MQ=60)
TCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCAT < SRR4302533.2209509/94‑1 (MQ=60)
CGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATC < SRR4302533.3104190/94‑1 (MQ=60)
CGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATC > SRR4302533.10592/1‑94 (MQ=60)
GGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCA < SRR4302533.6207081/94‑1 (MQ=60)
GGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCA < SRR4302533.2466709/94‑1 (MQ=60)
GACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAA > SRR4302533.2429483/1‑94 (MQ=60)
CCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAG > SRR4302533.1572375/1‑94 (MQ=60)
CCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAG < SRR4302533.73970/94‑1 (MQ=60)
CCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAG > SRR4302533.2104085/1‑94 (MQ=60)
CGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGC < SRR4302533.3883080/94‑1 (MQ=60)
CGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGA > SRR4302533.2949133/1‑94 (MQ=60)
GCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCA > SRR4302533.4117078/1‑94 (MQ=60)
GCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCA < SRR4302533.4110460/94‑1 (MQ=60)
GCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCA < SRR4302533.3471008/94‑1 (MQ=60)
GCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCA < SRR4302533.284778/94‑1 (MQ=60)
CCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAA < SRR4302533.2118320/94‑1 (MQ=60)
AGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATG > SRR4302533.1663579/1‑94 (MQ=60)
GCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGC > SRR4302533.1849888/1‑94 (MQ=60)
GTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCA > SRR4302533.3379985/1‑94 (MQ=60)
CGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGC < SRR4302533.1366904/94‑1 (MQ=60)
GGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCG < SRR4302533.4606541/94‑1 (MQ=60)
GGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCG > SRR4302533.6137648/1‑94 (MQ=60)
GATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGC > SRR4302533.2091494/1‑94 (MQ=60)
GATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGC > SRR4302533.5290240/1‑94 (MQ=60)
ATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCA > SRR4302533.2351856/1‑94 (MQ=60)
TTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCAC > SRR4302533.406863/1‑94 (MQ=60)
CGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGG > SRR4302533.5285432/1‑94 (MQ=60)
GGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGG < SRR4302533.5824512/94‑1 (MQ=60)
GGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGG > SRR4302533.5469755/1‑94 (MQ=60)
TAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCA > SRR4302533.2634189/1‑94 (MQ=60)
TAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCA > SRR4302533.3319858/1‑94 (MQ=60)
AATCGCTCATGCTCACCTTTTTGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGGCCTTCATCAGAAAGCAATGCCAGCGCACGGGCAT > SRR4302533.1071405/1‑94 (MQ=60)
ATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATT > SRR4302533.2018705/1‑94 (MQ=60)
TCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTC > SRR4302533.719903/1‑94 (MQ=60)
TCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTC < SRR4302533.6256316/94‑1 (MQ=60)
CGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCA < SRR4302533.4948824/94‑1 (MQ=60)
GCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAG > SRR4302533.423973/1‑94 (MQ=60)
CTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGC < SRR4302533.4691209/94‑1 (MQ=60)
CTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGC > SRR4302533.3968959/1‑94 (MQ=60)
CTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGC > SRR4302533.2113339/1‑94 (MQ=60)
TCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCG < SRR4302533.2699206/94‑1 (MQ=60)
TCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCG < SRR4302533.5249775/94‑1 (MQ=60)
TCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCG > SRR4302533.5569132/1‑94 (MQ=60)
TGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAACGCACGGGCATTCAGCGTTT > SRR4302533.3720094/1‑94 (MQ=60)
CTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCT < SRR4302533.3806609/94‑1 (MQ=60)
TCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTG > SRR4302533.5694390/1‑94 (MQ=60)
TCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCCTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTG < SRR4302533.3398176/94‑1 (MQ=60)
CACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGG > SRR4302533.4153742/1‑94 (MQ=60)
CACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGG < SRR4302533.2072834/94‑1 (MQ=60)
ACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGA > SRR4302533.5157746/1‑94 (MQ=60)
ACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGA < SRR4302533.5400527/94‑1 (MQ=60)
CCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGAT < SRR4302533.5463393/94‑1 (MQ=60)
CTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATC < SRR4302533.1174803/94‑1 (MQ=60)
CTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATC < SRR4302533.3969593/94‑1 (MQ=60)
TGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCC > SRR4302533.1785463/1‑94 (MQ=60)
GGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCG < SRR4302533.3478120/94‑1 (MQ=60)
GCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACTCGG > SRR4302533.918610/1‑94 (MQ=60)
GCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGG < SRR4302533.596246/94‑1 (MQ=60)
CGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGC > SRR4302533.2197406/1‑94 (MQ=60)
CGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGC > SRR4302533.4752115/1‑94 (MQ=60)
CGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAATCCTTCATCAGAAAACAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGC > SRR4302533.1918917/1‑94 (MQ=60)
GAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCA < SRR4302533.5044382/94‑1 (MQ=60)
CTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAA > SRR4302533.3590856/1‑94 (MQ=60)
TGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAAC > SRR4302533.5967423/1‑94 (MQ=60)
TGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAAC < SRR4302533.3498784/94‑1 (MQ=60)
GTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGA > SRR4302533.4812648/1‑94 (MQ=60)
GTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGA > SRR4302533.3313652/1‑94 (MQ=60)
TTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGAT < SRR4302533.295658/94‑1 (MQ=60)
TTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATT > SRR4302533.5732774/1‑94 (MQ=60)
TCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTC < SRR4302533.5238629/94‑1 (MQ=60)
CACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCA < SRR4302533.2268366/94‑1 (MQ=60)
ACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAA > SRR4302533.1698478/1‑94 (MQ=60)
CTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAAT > SRR4302533.36180/1‑94 (MQ=60)
CTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAAT < SRR4302533.4550825/94‑1 (MQ=60)
CTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAAT > SRR4302533.2273578/1‑94 (MQ=60)
GAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATAT > SRR4302533.2983127/1‑94 (MQ=60)
AGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATG < SRR4302533.1106957/94‑1 (MQ=60)
AGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATG < SRR4302533.2577446/94‑1 (MQ=60)
AGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATG > SRR4302533.4056094/1‑94 (MQ=60)
ATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTT < SRR4302533.1024235/94‑1 (MQ=60)
TCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTC > SRR4302533.2418993/1‑94 (MQ=60)
TCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTC < SRR4302533.4241660/94‑1 (MQ=60)
CCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCC > SRR4302533.4902250/1‑94 (MQ=60)
CCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGATTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCA > SRR4302533.1573790/1‑94 (MQ=60)
CCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA > SRR4302533.1558182/1‑94 (MQ=60)
CCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA < SRR4302533.2030944/94‑1 (MQ=60)
CCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA < SRR4302533.4925161/94‑1 (MQ=60)
CGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATAACCCGGCAGAACGATTTCAATATGTTCCCAA > SRR4302533.5232693/1‑94 (MQ=60)
GGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAAC < SRR4302533.3143161/94‑1 (MQ=60)
GGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAAC < SRR4302533.3970577/94‑1 (MQ=60)
GGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAAC < SRR4302533.408438/94‑1 (MQ=60)
GGCAGGCTGAGTCCTGCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCGCCCGGCAGAACGATTTCAATATGTTCCCAAC < SRR4302533.2699053/94‑1 (MQ=60)
CAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCT > SRR4302533.4423923/1‑94 (MQ=60)
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AATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCT > NC_000913/1957358‑1957544
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
