Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,972,685 |
T→C |
T222A (ACC→GCC) |
cheA ← |
CheA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,972,685 | 0 | T | C | 100.0%
| 696.4
/ NA
| 214 | T222A (ACC→GCC) | cheA | CheA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (99/115); total (99/115) |
Only 100 of 215 total aligned reads displayed.
CTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCG > NC_000913/1972596‑1972774
|
tCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATc < 1:2092620/93‑1 (MQ=255)
tCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATc < 1:6022278/93‑1 (MQ=255)
ccACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCt < 1:1805336/93‑1 (MQ=255)
ccACGCGCCCGGTCGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCt < 1:416748/93‑1 (MQ=255)
aCGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGa < 2:6215383/93‑1 (MQ=255)
cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt < 1:1615990/93‑1 (MQ=255)
cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt < 2:2774627/93‑1 (MQ=255)
cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt < 2:2514549/93‑1 (MQ=255)
gcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATc > 1:2196024/1‑93 (MQ=255)
gcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATc < 2:3702351/93‑1 (MQ=255)
cgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCg < 1:4016222/93‑1 (MQ=255)
gCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGc > 1:3444307/1‑93 (MQ=255)
ccGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCt > 2:3215471/1‑93 (MQ=255)
ccGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCt < 1:1428428/93‑1 (MQ=255)
cGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCtt < 1:3263268/93‑1 (MQ=255)
ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATc < 2:505110/93‑1 (MQ=255)
ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATc < 2:1505343/93‑1 (MQ=255)
gcTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATcaca < 1:825479/93‑1 (MQ=255)
gcTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATcaca < 1:3948121/93‑1 (MQ=255)
cTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaa < 2:2319748/93‑1 (MQ=255)
cTTGTACGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaa < 1:5473574/93‑1 (MQ=255)
tGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaaaa > 1:1923787/1‑93 (MQ=255)
gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc > 2:1970924/1‑93 (MQ=255)
gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc > 2:1615096/1‑93 (MQ=255)
gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc > 1:125230/1‑93 (MQ=255)
ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACa < 1:6198721/93‑1 (MQ=255)
ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACa > 2:1023452/1‑93 (MQ=255)
tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag > 1:2473539/1‑93 (MQ=255)
tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag < 2:2828861/93‑1 (MQ=255)
tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag < 2:1125603/93‑1 (MQ=255)
cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga < 2:775539/93‑1 (MQ=255)
cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga < 2:1185549/93‑1 (MQ=255)
cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga > 1:3113338/1‑93 (MQ=255)
ggCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACagag < 1:3535290/93‑1 (MQ=255)
gCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGt < 1:4319410/93‑1 (MQ=255)
cTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTa > 1:1634568/1‑93 (MQ=255)
cTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTa > 2:5665516/1‑93 (MQ=255)
tGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAc > 1:3904565/1‑93 (MQ=255)
tGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAc > 1:170117/1‑93 (MQ=255)
gCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAcc < 1:3017649/93‑1 (MQ=255)
cAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGc < 1:2291922/93‑1 (MQ=255)
aGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCt < 2:2032808/93‑1 (MQ=255)
gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCtg > 1:4046348/1‑93 (MQ=255)
gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCtg > 2:1847344/1‑93 (MQ=255)
gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAAAAAACCGCtg > 2:4265736/1‑93 (MQ=255)
tAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGa > 2:4168787/1‑93 (MQ=255)
tAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGa < 2:3906575/93‑1 (MQ=255)
aGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATg > 2:1784871/1‑93 (MQ=255)
aCTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCa < 2:704242/93‑1 (MQ=255)
cTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCAt > 1:427870/1‑93 (MQ=255)
tggtggGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATc > 1:2864699/1‑93 (MQ=255)
ggtggggtgtATATTTGTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt < 2:2114050/93‑1 (MQ=255)
ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACGGAGTACCGCTGTGATGTCATCt < 2:1424603/93‑1 (MQ=255)
ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt < 1:1173076/93‑1 (MQ=255)
ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt < 2:1037879/93‑1 (MQ=255)
gtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCtt < 2:5303517/93‑1 (MQ=255)
gggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCgg > 1:4502559/1‑93 (MQ=255)
ggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGc > 1:498852/1‑93 (MQ=255)
tggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGa > 1:5704356/1‑93 (MQ=255)
ggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAt > 2:1039399/1‑93 (MQ=255)
ggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAt < 2:5335243/93‑1 (MQ=255)
gATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATg < 1:2578684/93‑1 (MQ=255)
atatTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGt < 2:2904219/93‑1 (MQ=255)
tatTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTc < 2:4727337/93‑1 (MQ=255)
tttttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGc < 2:2477791/93‑1 (MQ=255)
ttttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGcc > 2:4035309/1‑93 (MQ=255)
tttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGccc < 2:340017/93‑1 (MQ=255)
tGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTCATGTCATCTTCGGCGATCTCGccccg > 2:3818765/1‑91 (MQ=255)
cGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTaa > 1:6243475/1‑93 (MQ=255)
gagaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAat < 1:1006077/93‑1 (MQ=255)
agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata < 2:4420923/93‑1 (MQ=255)
agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata < 1:3082217/93‑1 (MQ=255)
agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata > 1:5196421/1‑93 (MQ=255)
gaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAatat < 2:3339314/93‑1 (MQ=255)
gaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAatat > 1:3233298/1‑93 (MQ=255)
aCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATAtt < 2:4962721/93‑1 (MQ=255)
cTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg > 2:5842207/1‑93 (MQ=255)
cTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg < 2:432999/93‑1 (MQ=255)
ttCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGc > 1:2387209/1‑93 (MQ=255)
ttCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGc < 2:4534605/93‑1 (MQ=255)
cTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCg > 1:751073/1‑93 (MQ=255)
cTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCg > 2:1744157/1‑93 (MQ=255)
tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga < 2:876800/93‑1 (MQ=255)
tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga < 2:5549705/93‑1 (MQ=255)
tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGACGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga < 1:2179292/93‑1 (MQ=255)
aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag > 1:5847841/1‑93 (MQ=255)
aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag > 2:2602875/1‑93 (MQ=255)
aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag > 1:24902/1‑93 (MQ=255)
cTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgaga < 1:2646688/93‑1 (MQ=255)
tGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag > 2:5106281/1‑93 (MQ=255)
tGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGNCGCCCGGTAATATTGNCGanag > 1:4902971/1‑93 (MQ=255)
gTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGc > 2:4400576/1‑93 (MQ=255)
gTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGc > 1:1297542/1‑93 (MQ=255)
tttCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCg > 2:4077072/1‑93 (MQ=255)
tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa > 2:3250028/1‑93 (MQ=255)
tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa > 1:6309935/1‑93 (MQ=255)
tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa < 1:5897543/93‑1 (MQ=255)
aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc < 2:5164286/93‑1 (MQ=255)
aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc > 1:5954921/1‑93 (MQ=255)
aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc < 2:3853448/93‑1 (MQ=255)
|
CTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCG > NC_000913/1972596‑1972774
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCC > NC_000913/1972592‑1972778
|
CCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGC > SRR4302533.6183900/1‑94 (MQ=60)
CCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCA > SRR4302533.1183683/1‑94 (MQ=60)
CCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCA < SRR4302533.3424844/94‑1 (MQ=60)
CCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCA < SRR4302533.4976737/94‑1 (MQ=60)
CGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGAATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAA < SRR4302533.2897330/94‑1 (MQ=60)
TCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCT < SRR4302533.2105508/94‑1 (MQ=60)
TCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCT < SRR4302533.6058774/94‑1 (MQ=60)
CCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTG < SRR4302533.1816325/94‑1 (MQ=60)
CCACGCGCCCGGTCGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTG < SRR4302533.419250/94‑1 (MQ=60)
CGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATC < SRR4302533.1435683/94‑1 (MQ=60)
CGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATC > SRR4302533.2209557/1‑94 (MQ=60)
CGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATC < SRR4302533.1625785/94‑1 (MQ=60)
CGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATC < SRR4302533.4161916/94‑1 (MQ=60)
GCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCG < SRR4302533.2361520/94‑1 (MQ=60)
CGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGG < SRR4302533.4040673/94‑1 (MQ=60)
GGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGC < SRR4302533.44283/94‑1 (MQ=60)
GGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGC > SRR4302533.3465579/1‑94 (MQ=60)
GCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCT < SRR4302533.3841781/94‑1 (MQ=60)
CCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTT > SRR4302533.4987060/1‑94 (MQ=60)
CCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTT < SRR4302533.1437064/94‑1 (MQ=60)
CGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTC < SRR4302533.6265505/94‑1 (MQ=60)
CGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTC < SRR4302533.3283398/94‑1 (MQ=60)
GGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCA > SRR4302533.4305176/1‑94 (MQ=60)
GTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAA < SRR4302533.1574139/94‑1 (MQ=60)
TTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAAT > SRR4302533.901262/1‑94 (MQ=60)
GGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCA < SRR4302533.3683359/94‑1 (MQ=60)
GCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCAC > SRR4302533.6203525/1‑94 (MQ=60)
GCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAA < SRR4302533.830323/94‑1 (MQ=60)
GCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAA < SRR4302533.3972197/94‑1 (MQ=60)
CTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAA > SRR4302533.175047/1‑94 (MQ=60)
CTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAA < SRR4302533.2903180/94‑1 (MQ=60)
CTTGTACGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAA < SRR4302533.5506566/94‑1 (MQ=60)
TTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAA > SRR4302533.5768122/1‑94 (MQ=60)
TTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAA > SRR4302533.1935524/1‑94 (MQ=60)
TGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAC > SRR4302533.126015/1‑94 (MQ=60)
TTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAG > SRR4302533.2488792/1‑94 (MQ=60)
TTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAG > SRR4302533.2206660/1‑94 (MQ=60)
TTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAG < SRR4302533.6037260/94‑1 (MQ=60)
TTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAG < SRR4302533.6235906/94‑1 (MQ=60)
TCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGA > SRR4302533.3132484/1‑94 (MQ=60)
GGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGT < SRR4302533.3557076/94‑1 (MQ=60)
GCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTA > SRR4302533.1644470/1‑94 (MQ=60)
GCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTA < SRR4302533.4345426/94‑1 (MQ=60)
CTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAC > SRR4302533.171189/1‑94 (MQ=60)
CTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAC < SRR4302533.2555473/94‑1 (MQ=60)
CTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAC > SRR4302533.3928412/1‑94 (MQ=60)
TGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACC > SRR4302533.3079264/1‑94 (MQ=60)
GCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCG < SRR4302533.3036104/94‑1 (MQ=60)
CAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCT < SRR4302533.2306112/94‑1 (MQ=60)
AGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTG > SRR4302533.4070976/1‑94 (MQ=60)
GTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGT > SRR4302533.3930438/1‑94 (MQ=60)
TTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTG < SRR4302533.663437/94‑1 (MQ=60)
TTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGA > SRR4302533.260164/1‑94 (MQ=60)
AAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATG < SRR4302533.5856483/94‑1 (MQ=60)
AGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGT > SRR4302533.2475957/1‑94 (MQ=60)
GCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTC < SRR4302533.446902/94‑1 (MQ=60)
CACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCA < SRR4302533.1277362/94‑1 (MQ=60)
ACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCAT > SRR4302533.430422/1‑94 (MQ=60)
ACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCAT < SRR4302533.492339/94‑1 (MQ=60)
CTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATC > SRR4302533.2882323/1‑94 (MQ=60)
CTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATC < SRR4302533.5187771/94‑1 (MQ=60)
TGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCT < SRR4302533.1689220/94‑1 (MQ=60)
TGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCT < SRR4302533.335439/94‑1 (MQ=60)
GGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTT < SRR4302533.1180116/94‑1 (MQ=60)
TGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCG < SRR4302533.5610062/94‑1 (MQ=60)
GGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGG > SRR4302533.4529837/1‑94 (MQ=60)
GGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGC > SRR4302533.501821/1‑94 (MQ=60)
GTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGA > SRR4302533.1236409/1‑94 (MQ=60)
GTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGA > SRR4302533.5738813/1‑94 (MQ=60)
TGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAT > SRR4302533.2351030/1‑94 (MQ=60)
TGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAT < SRR4302533.422775/94‑1 (MQ=60)
TGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAT > SRR4302533.3130033/1‑94 (MQ=60)
GGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATG > SRR4302533.700956/1‑94 (MQ=60)
GATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGT < SRR4302533.3974786/94‑1 (MQ=60)
GATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGT < SRR4302533.2594553/94‑1 (MQ=60)
ATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTC > SRR4302533.771880/1‑94 (MQ=60)
ATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGC > SRR4302533.4051968/1‑94 (MQ=60)
TTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGG < SRR4302533.5900853/94‑1 (MQ=60)
GGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTA < SRR4302533.3028267/94‑1 (MQ=60)
GCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAA > SRR4302533.6280847/1‑94 (MQ=60)
GCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAA > SRR4302533.2141524/1‑94 (MQ=60)
CGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAAT < SRR4302533.1064223/94‑1 (MQ=60)
CGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAAT > SRR4302533.5988830/1‑94 (MQ=60)
GAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATA > SRR4302533.5227758/1‑94 (MQ=60)
GAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATA < SRR4302533.1011960/94‑1 (MQ=60)
AGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATAT < SRR4302533.1659862/94‑1 (MQ=60)
AGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATAT < SRR4302533.3101126/94‑1 (MQ=60)
AGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATAT > SRR4302533.3253222/1‑94 (MQ=60)
GACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATT > SRR4302533.3160249/1‑94 (MQ=60)
CTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGC > SRR4302533.2401958/1‑94 (MQ=60)
CTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGC > SRR4302533.6294968/1‑94 (MQ=60)
TCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCG > SRR4302533.5325966/1‑94 (MQ=60)
TCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCG < SRR4302533.2252657/94‑1 (MQ=60)
TCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCG > SRR4302533.755497/1‑94 (MQ=60)
CTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGA > SRR4302533.1627853/1‑94 (MQ=60)
CTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGGACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGA > SRR4302533.25067/1‑94 (MQ=60)
TACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAG > SRR4302533.5883191/1‑94 (MQ=60)
TACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAG > SRR4302533.25068/1‑94 (MQ=60)
TACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGACGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAG < SRR4302533.2192729/94‑1 (MQ=60)
CTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAG < SRR4302533.2662949/94‑1 (MQ=60)
CTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAG < SRR4302533.1941667/94‑1 (MQ=60)
CTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGNCGCCCGGTAATATTGNCGANAG > SRR4302533.4932682/1‑94 (MQ=60)
TGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGC > SRR4302533.1305353/1‑94 (MQ=60)
GTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCG < SRR4302533.3274177/94‑1 (MQ=60)
TTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAA > SRR4302533.6347905/1‑94 (MQ=60)
TCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAAT < SRR4302533.5933162/94‑1 (MQ=60)
CAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATC > SRR4302533.5990942/1‑94 (MQ=60)
CAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATC < SRR4302533.2740291/94‑1 (MQ=60)
CAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATC > SRR4302533.3518407/1‑94 (MQ=60)
AGGCAATCTGATCGGCTTCAATCACGAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGC < SRR4302533.1866304/94‑1 (MQ=60)
AGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGC > SRR4302533.5515327/1‑94 (MQ=60)
AGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGC > SRR4302533.1955286/1‑94 (MQ=60)
CAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCC > SRR4302533.595684/1‑94 (MQ=60)
CAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCC < SRR4302533.5884785/94‑1 (MQ=60)
CAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCC > SRR4302533.1720854/1‑94 (MQ=60)
|
CCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCC > NC_000913/1972592‑1972778
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
