Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,981,425 |
T→C |
T48A (ACC→GCC) |
araH ← |
ABC‑type arabinose transport system permease component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,981,425 | 0 | T | C | 100.0%
| 675.1
/ NA
| 210 | T48A (ACC→GCC) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/94); total (116/94) |
Only 100 of 212 total aligned reads displayed.
AGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGC > NC_000913/1981335‑1981514
|
aGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCgg < 1:4698699/93‑1 (MQ=255)
ccGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCaaaa < 2:2116887/93‑1 (MQ=255)
ggAAGCGAGGCAGAACAACATGCCACAGGCCACCGTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAAtt < 2:2541760/93‑1 (MQ=255)
ggAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAAtt < 1:130183/93‑1 (MQ=255)
aaGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTg > 1:5600441/1‑93 (MQ=255)
aaGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTg < 1:3585418/93‑1 (MQ=255)
aaGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTg > 2:4323321/1‑93 (MQ=255)
aGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAATTTGCCAGGCCCAACCCTTTCATCTTAATGAAGGCGGCAAAATTTgg < 2:5102168/93‑1 (MQ=255)
gCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGTCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTggg > 2:3455153/1‑93 (MQ=255)
gCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTggg < 1:5413295/93‑1 (MQ=255)
gCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTggg < 2:4374668/93‑1 (MQ=255)
cGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGa < 2:4203428/93‑1 (MQ=255)
cGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGa > 2:4465284/1‑93 (MQ=255)
gAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGAc > 2:3958997/1‑93 (MQ=255)
gAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGAc > 1:847531/1‑93 (MQ=255)
aGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACa > 2:3128638/1‑93 (MQ=255)
aGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACa > 1:3472827/1‑93 (MQ=255)
gCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACaaa < 1:2308635/93‑1 (MQ=255)
aGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACaaaaa > 2:102856/1‑93 (MQ=255)
aGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACaaaaa > 2:1240770/1‑93 (MQ=255)
aGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACaaaaa < 1:4984550/93‑1 (MQ=255)
caacaTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGc < 1:383389/93‑1 (MQ=255)
aacaTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGca < 1:1004980/93‑1 (MQ=255)
acaTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGcac < 2:1433544/93‑1 (MQ=255)
caTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGcaca < 1:2859677/93‑1 (MQ=255)
caTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGcaca < 1:584899/93‑1 (MQ=255)
aTGCCACAGGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAg < 2:4073218/93‑1 (MQ=255)
aTGCCACAAGCCACCATCCCCGACAAGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAg < 1:6086637/93‑1 (MQ=255)
gCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGc < 1:4330349/93‑1 (MQ=255)
gCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGc < 1:5195908/93‑1 (MQ=255)
gCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGc > 1:68992/1‑93 (MQ=255)
caAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATa < 2:4686922/93‑1 (MQ=255)
aaGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATaa < 1:328200/93‑1 (MQ=255)
aGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATaaa < 1:4089591/93‑1 (MQ=255)
aGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATaaa < 1:2751777/93‑1 (MQ=255)
aGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATaaa > 1:1643666/1‑93 (MQ=255)
gCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAag > 2:2268821/1‑93 (MQ=255)
ccaccaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAaga < 2:5728089/93‑1 (MQ=255)
caccaTCCCCGACATGGCAATTGCCAGGCCCCACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACCCGCGATAAagag > 2:921659/1‑93 (MQ=255)
caccaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAagag > 1:4476579/1‑93 (MQ=255)
accaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGc < 1:2935110/93‑1 (MQ=255)
ccaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCa < 2:5388901/93‑1 (MQ=255)
caTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAc < 1:2899140/93‑1 (MQ=255)
caTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAc < 1:2432591/93‑1 (MQ=255)
caTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAc < 1:4830167/93‑1 (MQ=255)
aTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAcc > 1:1929074/1‑93 (MQ=255)
tCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCg < 2:2651125/93‑1 (MQ=255)
ccccGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGc < 2:3813286/93‑1 (MQ=255)
cGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaaa < 2:413304/93‑1 (MQ=255)
cGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaaa > 2:4557602/1‑93 (MQ=255)
cGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaaa > 2:3665823/1‑93 (MQ=255)
gACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAac > 1:2566865/1‑93 (MQ=255)
aCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAaca < 2:657963/93‑1 (MQ=255)
aCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAaca < 1:5727517/93‑1 (MQ=255)
cATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCacacac > 1:5632190/1‑93 (MQ=255)
aTGGAAATTGCCAGGCCCAACCCTTTGATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcacc > 2:598110/1‑93 (MQ=255)
tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATTGCACAGGCGATAAAGAGTACCGCAAAcacca > 2:6308198/1‑93 (MQ=255)
tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcacca > 2:324742/1‑93 (MQ=255)
tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcacca > 1:3072843/1‑93 (MQ=255)
tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcacca < 2:185174/93‑1 (MQ=255)
ggAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcaccac < 1:5970386/93‑1 (MQ=255)
aaaTTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACAccacca < 1:1515173/93‑1 (MQ=255)
aTTGCCAGGCCCAACCCTTTCATATTAAGGAAGGCGGCAAAATGTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGc < 2:590416/93‑1 (MQ=255)
ttGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCa > 2:2801918/1‑93 (MQ=255)
ttGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCa > 1:4632720/1‑93 (MQ=255)
ttGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCa > 2:781026/1‑93 (MQ=255)
ttGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCa < 1:5861288/93‑1 (MQ=255)
tGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCAt < 1:1448128/93‑1 (MQ=255)
gCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg < 1:4013948/93‑1 (MQ=255)
gCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg > 2:6035734/1‑93 (MQ=255)
cAGGCCACACCCTTTCATATTAATGAAGGCGGCAAAATTTGAGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGcc < 1:1243184/93‑1 (MQ=255)
aGGCCCAACCCTTTCATATTAATTTAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCAACAGCATGCCg > 1:997578/1‑93 (MQ=255)
aGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCg > 2:6237877/1‑93 (MQ=255)
ggCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGt > 2:1271068/1‑93 (MQ=255)
cccAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTAc > 1:2124384/1‑93 (MQ=255)
ccAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAACAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACt > 1:2425464/1‑93 (MQ=255)
cAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTg > 2:5213616/1‑93 (MQ=255)
cAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTg > 2:1333571/1‑93 (MQ=255)
aaCCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGa > 2:1400353/1‑93 (MQ=255)
aCCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGAt > 2:5445707/1‑93 (MQ=255)
cccTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATc < 1:6131476/93‑1 (MQ=255)
cccTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATc < 2:3339597/93‑1 (MQ=255)
ccTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATcc < 1:34059/93‑1 (MQ=255)
tttCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCa > 1:5366238/1‑93 (MQ=255)
tttCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCa < 2:3556886/93‑1 (MQ=255)
tCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGa < 2:85138/93‑1 (MQ=255)
tCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGa > 2:2387812/1‑93 (MQ=255)
tCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGa < 2:3379067/93‑1 (MQ=255)
tCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGa > 1:4602661/1‑93 (MQ=255)
cATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGAt > 1:796409/1‑93 (MQ=255)
cATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGAt < 2:3630829/93‑1 (MQ=255)
atatTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATa > 1:4562601/1‑93 (MQ=255)
atatTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATa > 2:1620941/1‑93 (MQ=255)
tatTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAc > 1:749626/1‑93 (MQ=255)
tatTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAc > 2:2422312/1‑93 (MQ=255)
ttAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGc > 2:152466/1‑93 (MQ=255)
tAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGcc > 2:4252576/1‑93 (MQ=255)
tGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGa < 2:724342/93‑1 (MQ=255)
tGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGa > 2:3073787/1‑93 (MQ=255)
aaGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAg < 1:3779626/93‑1 (MQ=255)
|
AGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGC > NC_000913/1981335‑1981514
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAA > NC_000913/1981332‑1981518
|
CAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGC > SRR4302533.6165618/1‑94 (MQ=60)
CAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGC > SRR4302533.562143/1‑94 (MQ=60)
CAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGC < SRR4302533.4986548/94‑1 (MQ=60)
AAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCG > SRR4302533.4230679/1‑94 (MQ=60)
AAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGG > SRR4302533.5873151/1‑94 (MQ=60)
AAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGG < SRR4302533.4360588/94‑1 (MQ=60)
AGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGC < SRR4302533.2443029/94‑1 (MQ=60)
AGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGC < SRR4302533.4727178/94‑1 (MQ=60)
GTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCA < SRR4302533.3376802/94‑1 (MQ=60)
CACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAA > SRR4302533.3183795/1‑94 (MQ=60)
CACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAA > SRR4302533.5466022/1‑94 (MQ=60)
ACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAA > SRR4302533.5638059/1‑94 (MQ=60)
CCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAAT > SRR4302533.4142870/1‑94 (MQ=60)
GGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTT < SRR4302533.130998/94‑1 (MQ=60)
GAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTG < SRR4302533.1872161/94‑1 (MQ=60)
GAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTG > SRR4302533.5634278/1‑94 (MQ=60)
AAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGG < SRR4302533.3607500/94‑1 (MQ=60)
AAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGG < SRR4302533.5714334/94‑1 (MQ=60)
AGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGG > SRR4302533.2938841/1‑94 (MQ=60)
GCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGA < SRR4302533.5445846/94‑1 (MQ=60)
CGAGGCAGACCAACATGCCACAAGCCACCATCCCCGACATGGAAATGGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGAC < SRR4302533.3544380/94‑1 (MQ=60)
CGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGAC > SRR4302533.852492/1‑94 (MQ=60)
GAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACA > SRR4302533.3494256/1‑94 (MQ=60)
GAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACA > SRR4302533.3494257/1‑94 (MQ=60)
GAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACA > SRR4302533.5161478/1‑94 (MQ=60)
GCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAA > SRR4302533.5427179/1‑94 (MQ=60)
GCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAA < SRR4302533.2322937/94‑1 (MQ=60)
GCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAA > SRR4302533.5349400/1‑94 (MQ=60)
AGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAAT < SRR4302533.5014773/94‑1 (MQ=60)
AACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGG < SRR4302533.2913999/94‑1 (MQ=60)
ACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGC > SRR4302533.2357297/1‑94 (MQ=60)
CAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCA < SRR4302533.4335282/94‑1 (MQ=60)
CAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCA < SRR4302533.385705/94‑1 (MQ=60)
AACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCAC < SRR4302533.4638113/94‑1 (MQ=60)
AACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCAC < SRR4302533.1010858/94‑1 (MQ=60)
CATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAG < SRR4302533.588348/94‑1 (MQ=60)
CATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAG < SRR4302533.2877270/94‑1 (MQ=60)
CATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTACATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAG < SRR4302533.4472756/94‑1 (MQ=60)
ATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGG < SRR4302533.6166482/94‑1 (MQ=60)
ATGCCACAAGCCACCATCCCCGACAAGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGG < SRR4302533.6123435/94‑1 (MQ=60)
TGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGC > SRR4302533.69442/1‑94 (MQ=60)
GCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCG < SRR4302533.4356438/94‑1 (MQ=60)
GCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCG < SRR4302533.5227243/94‑1 (MQ=60)
CCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGA > SRR4302533.6079242/1‑94 (MQ=60)
CCAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATA < SRR4302533.2694759/94‑1 (MQ=60)
AAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA > SRR4302533.3681200/1‑94 (MQ=60)
AAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA > SRR4302533.1653617/1‑94 (MQ=60)
AAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA < SRR4302533.330199/94‑1 (MQ=60)
AGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAG < SRR4302533.2768650/94‑1 (MQ=60)
AGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAG < SRR4302533.4114489/94‑1 (MQ=60)
AGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTACATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAG < SRR4302533.5916436/94‑1 (MQ=60)
CCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAG < SRR4302533.2817535/94‑1 (MQ=60)
CCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAG > SRR4302533.4503655/1‑94 (MQ=60)
CCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAG > SRR4302533.470673/1‑94 (MQ=60)
ACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCA < SRR4302533.2953055/94‑1 (MQ=60)
CCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAC < SRR4302533.719525/94‑1 (MQ=60)
CCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAC > SRR4302533.3964219/1‑94 (MQ=60)
CCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAC > SRR4302533.6025785/1‑94 (MQ=60)
CATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACC < SRR4302533.2447622/94‑1 (MQ=60)
CATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACC < SRR4302533.2916956/94‑1 (MQ=60)
CATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACC > SRR4302533.1940845/1‑94 (MQ=60)
CATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACC < SRR4302533.4859443/94‑1 (MQ=60)
ATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCG > SRR4302533.2296283/1‑94 (MQ=60)
ATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCG > SRR4302533.1946265/1‑94 (MQ=60)
CCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAA > SRR4302533.5892232/1‑94 (MQ=60)
CGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAC > SRR4302533.2582662/1‑94 (MQ=60)
CGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAC > SRR4302533.499108/1‑94 (MQ=60)
ACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCACACAC > SRR4302533.5666248/1‑94 (MQ=60)
ACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACAC < SRR4302533.5762103/94‑1 (MQ=60)
ATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCA > SRR4302533.3091706/1‑94 (MQ=60)
GGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACC < SRR4302533.6006529/94‑1 (MQ=60)
AAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAG < SRR4302533.1524298/94‑1 (MQ=60)
ATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCA > SRR4302533.4660794/1‑94 (MQ=60)
ATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCA > SRR4302533.845472/1‑94 (MQ=60)
TTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCAT < SRR4302533.5896727/94‑1 (MQ=60)
TGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATG < SRR4302533.1456865/94‑1 (MQ=60)
GCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGC < SRR4302533.4038390/94‑1 (MQ=60)
CAGGCCCAACCCTTTCATATTAATTTAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCAACAGCATGCCG > SRR4302533.1003404/1‑94 (MQ=60)
CAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCG < SRR4302533.755195/94‑1 (MQ=60)
CAGGCCACACCCTTTCATATTAATGAAGGCGGCAAAATTTGAGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCG < SRR4302533.1250607/94‑1 (MQ=60)
GCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTAC > SRR4302533.2137479/1‑94 (MQ=60)
CCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAACAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACT > SRR4302533.2440437/1‑94 (MQ=60)
CCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACT < SRR4302533.3841400/94‑1 (MQ=60)
CCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTG > SRR4302533.2379265/1‑94 (MQ=60)
AACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGAT < SRR4302533.1278164/94‑1 (MQ=60)
AACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGAT > SRR4302533.4075055/1‑94 (MQ=60)
ACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATC > SRR4302533.1467494/1‑94 (MQ=60)
CCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCC > SRR4302533.5317038/1‑94 (MQ=60)
CCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCC < SRR4302533.6168420/94‑1 (MQ=60)
CCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCC < SRR4302533.34290/94‑1 (MQ=60)
CCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCC < SRR4302533.2470073/94‑1 (MQ=60)
CTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCA > SRR4302533.1396543/1‑94 (MQ=60)
CTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCA > SRR4302533.5398472/1‑94 (MQ=60)
TTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGA > SRR4302533.4630544/1‑94 (MQ=60)
TCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGAT > SRR4302533.801091/1‑94 (MQ=60)
TCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGAT < SRR4302533.315160/94‑1 (MQ=60)
CATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATA > SRR4302533.4590270/1‑94 (MQ=60)
ATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAC > SRR4302533.1627183/1‑94 (MQ=60)
ATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAC > SRR4302533.754041/1‑94 (MQ=60)
ATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAC < SRR4302533.4513318/94‑1 (MQ=60)
ATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCAGGCCGTACTGATCCCAGATAC < SRR4302533.879721/94‑1 (MQ=60)
ATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGC > SRR4302533.1044781/1‑94 (MQ=60)
TTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCC > SRR4302533.4795819/1‑94 (MQ=60)
TAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCC > SRR4302533.632463/1‑94 (MQ=60)
AATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCG > SRR4302533.2987177/1‑94 (MQ=60)
GAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAG > SRR4302533.4602102/1‑94 (MQ=60)
AAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGC < SRR4302533.3802779/94‑1 (MQ=60)
GGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTG > SRR4302533.3658397/1‑94 (MQ=60)
GGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTG < SRR4302533.1146929/94‑1 (MQ=60)
CGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAA < SRR4302533.1922222/94‑1 (MQ=60)
|
CAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAA > NC_000913/1981332‑1981518
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
