Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,225,197 |
T→C |
T32A (ACC→GCC) |
yohF ← |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,225,197 | 0 | T | C | 100.0%
| 590.3
/ NA
| 181 | T32A (ACC→GCC) | yohF | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/90); total (91/90) |
Only 100 of 183 total aligned reads displayed.
GAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > NC_000913/2225108‑2225286
|
gagaTCCAGCTGCACGATCTCCGCACGTACGCTGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAAt > 1:5601461/1‑93 (MQ=255)
gagaTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAAt > 2:3726995/1‑93 (MQ=255)
gagaTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAAt < 1:3027240/93‑1 (MQ=255)
gagaTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAAt < 2:4472752/93‑1 (MQ=255)
agaTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATa < 2:4826748/93‑1 (MQ=255)
aTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATAcc < 2:4355395/93‑1 (MQ=255)
cAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAat > 1:92947/1‑93 (MQ=255)
cAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAat > 1:3879218/1‑93 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata < 1:1023527/93‑1 (MQ=255)
gCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAatat > 1:1849747/1‑93 (MQ=255)
gCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAatat > 2:5089357/1‑93 (MQ=255)
cTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATc > 2:6212635/1‑93 (MQ=255)
cACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCaaa > 1:1238832/1‑93 (MQ=255)
aCGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAc < 1:1157351/93‑1 (MQ=255)
cGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcc < 1:4399205/93‑1 (MQ=255)
cGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcc > 2:5234761/1‑93 (MQ=255)
cGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcc < 2:1522622/93‑1 (MQ=255)
gATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAccc > 2:3024437/1‑93 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc > 1:1985920/1‑93 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc > 1:75622/1‑93 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc < 1:2183748/93‑1 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc < 2:5237078/93‑1 (MQ=255)
tctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCct > 1:4888337/1‑93 (MQ=255)
tctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCct < 2:6036387/93‑1 (MQ=255)
ctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctg < 1:2220048/93‑1 (MQ=255)
tcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctgc > 2:2343017/1‑93 (MQ=255)
ccGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctgct < 1:1680547/93‑1 (MQ=255)
gCACTTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCtgctgc < 1:412194/93‑1 (MQ=255)
gCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCtgctgc > 2:2065243/1‑93 (MQ=255)
gCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCtgctgc > 1:3974042/1‑93 (MQ=255)
gTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCa > 2:790394/1‑93 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAg > 1:4831379/1‑93 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAg < 1:472098/93‑1 (MQ=255)
aCGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGt > 1:5810144/1‑93 (MQ=255)
cGCCGTGGCTAACTCCCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAACCCCCTGCTGCGCCAGta < 2:5443028/93‑1 (MQ=255)
gCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaa > 2:6268737/1‑93 (MQ=255)
ccGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaat > 1:2732027/1‑93 (MQ=255)
cGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaata < 1:3571586/93‑1 (MQ=255)
cGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaata < 1:533032/93‑1 (MQ=255)
gTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaataa < 2:105629/93‑1 (MQ=255)
ggCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcg > 1:1086274/1‑93 (MQ=255)
gCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcgc > 1:1430032/1‑93 (MQ=255)
tAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACgcgc > 2:2717228/1‑93 (MQ=255)
aaCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCa > 1:4798478/1‑93 (MQ=255)
aaCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCa < 2:3973254/93‑1 (MQ=255)
aCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAc > 1:5347737/1‑93 (MQ=255)
cTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAct > 2:2543470/1‑93 (MQ=255)
tACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCActc < 1:4956987/93‑1 (MQ=255)
ccTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCtt < 2:1812989/93‑1 (MQ=255)
cTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCTGTAATAACGCGCACTCttt < 2:6144891/93‑1 (MQ=255)
cTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCttt > 2:1850322/1‑93 (MQ=255)
aCGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGcc < 1:2640690/93‑1 (MQ=255)
cgcgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCg < 2:4542970/93‑1 (MQ=255)
gcgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGa < 2:4540132/93‑1 (MQ=255)
cgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGAt < 2:4011718/93‑1 (MQ=255)
cgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATcc < 1:423633/93‑1 (MQ=255)
ggTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATccc > 1:5950303/1‑93 (MQ=255)
ggTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATccc > 1:2120708/1‑93 (MQ=255)
ggTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATcac > 1:4475848/1‑91 (MQ=255)
gTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATcccc > 2:4592474/1‑93 (MQ=255)
tATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCg > 2:3366685/1‑93 (MQ=255)
aTCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGa > 2:2423052/1‑93 (MQ=255)
aTCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGa > 2:5049772/1‑93 (MQ=255)
aTCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGa < 1:5084816/93‑1 (MQ=255)
tCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGaa < 2:1308285/93‑1 (MQ=255)
tCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGaa > 1:5789010/1‑93 (MQ=255)
cTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAAt < 1:2859039/93‑1 (MQ=255)
cTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAAt < 2:5863518/93‑1 (MQ=255)
ttttGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATc > 2:2335197/1‑93 (MQ=255)
tGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGa > 1:3281044/1‑93 (MQ=255)
gCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAATAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAg > 1:5165115/1‑93 (MQ=255)
cccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGc > 1:5351115/1‑93 (MQ=255)
cccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGc > 1:6152874/1‑93 (MQ=255)
ccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCg > 2:4387073/1‑93 (MQ=255)
ccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCg > 1:6176214/1‑93 (MQ=255)
cttcttCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCgg < 2:888469/93‑1 (MQ=255)
cttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaa > 2:3998123/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat < 1:2754198/93‑1 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat > 2:2997125/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat > 1:3400081/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat > 2:1244237/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat < 1:1105286/93‑1 (MQ=255)
tcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaata < 1:4341446/93‑1 (MQ=255)
tcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaata < 1:1927885/93‑1 (MQ=255)
cATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATATCGCGCCCTCTTTGCCGATCCCCGAATCGGAGGCGGtaataa < 1:2150587/93‑1 (MQ=255)
aTCTGAGTGCCAGGCAATACTAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTaataat > 2:3587173/1‑93 (MQ=255)
aTCTGAGTGCCAGGCAATACCACTATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTaataat < 1:6111061/93‑1 (MQ=255)
aTCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTaataat > 2:214467/1‑93 (MQ=255)
aTCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTaataat > 2:2441300/1‑93 (MQ=255)
aTCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTaataat > 1:2925400/1‑93 (MQ=255)
tCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATc > 1:4161979/1‑93 (MQ=255)
cTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCg < 1:2091246/93‑1 (MQ=255)
gAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCa > 2:350283/1‑93 (MQ=255)
aGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCaa < 2:3647246/93‑1 (MQ=255)
gTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAAc < 2:5935280/93‑1 (MQ=255)
gTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAAc < 2:5548425/93‑1 (MQ=255)
cAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtgt > 1:5415530/1‑93 (MQ=255)
cAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtgt > 2:4093602/1‑93 (MQ=255)
aGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtgtg < 1:1430132/93‑1 (MQ=255)
aGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtgtg > 1:899210/1‑93 (MQ=255)
|
GAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > NC_000913/2225108‑2225286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > NC_000913/2225104‑2225290
|
TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGC < SRR4302533.2476778/94‑1 (MQ=60)
CGAGATCCAGCTGCACGATCTCCGCACGTACGCTGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAAT > SRR4302533.5635309/1‑94 (MQ=60)
GAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATA < SRR4302533.3045766/94‑1 (MQ=60)
AGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATAC < SRR4302533.2801962/94‑1 (MQ=60)
TCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAA > SRR4302533.5844441/1‑94 (MQ=60)
CCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAAT > SRR4302533.93535/1‑94 (MQ=60)
CCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAAT > SRR4302533.3902889/1‑94 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT < SRR4302533.1029542/94‑1 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT > SRR4302533.1861030/1‑94 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT < SRR4302533.1525462/94‑1 (MQ=60)
GCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATC < SRR4302533.3313989/94‑1 (MQ=60)
TGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAA < SRR4302533.4084016/94‑1 (MQ=60)
GCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAA > SRR4302533.1246235/1‑94 (MQ=60)
GCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAA < SRR4302533.3123989/94‑1 (MQ=60)
CACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAC > SRR4302533.5615658/1‑94 (MQ=60)
ACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACC < SRR4302533.1164295/94‑1 (MQ=60)
CGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCC < SRR4302533.4425765/94‑1 (MQ=60)
GATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCC < SRR4302533.420952/94‑1 (MQ=60)
GATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCC > SRR4302533.76114/1‑94 (MQ=60)
GATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCC > SRR4302533.1998071/1‑94 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT < SRR4302533.2197212/94‑1 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT > SRR4302533.4917954/1‑94 (MQ=60)
TCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTG < SRR4302533.677992/94‑1 (MQ=60)
CTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGC < SRR4302533.2233753/94‑1 (MQ=60)
CCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTG < SRR4302533.1690729/94‑1 (MQ=60)
CGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGC > SRR4302533.3998240/1‑94 (MQ=60)
GCACTTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCG < SRR4302533.414668/94‑1 (MQ=60)
GTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAG > SRR4302533.4860660/1‑94 (MQ=60)
TACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGT > SRR4302533.5845231/1‑94 (MQ=60)
TACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGT < SRR4302533.474920/94‑1 (MQ=60)
CGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAA < SRR4302533.5420877/94‑1 (MQ=60)
GCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAAT > SRR4302533.2748791/1‑94 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302533.2193562/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302533.1146458/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302533.536202/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302533.3593597/94‑1 (MQ=60)
TGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACG > SRR4302533.1092677/1‑94 (MQ=60)
GGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGC > SRR4302533.1438676/1‑94 (MQ=60)
TAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCA > SRR4302533.4827543/1‑94 (MQ=60)
AACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAC > SRR4302533.5379818/1‑94 (MQ=60)
CTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTC > SRR4302533.5034487/1‑94 (MQ=60)
TACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTNAGTGCCAGGCAATACCNATATCAAANCCCTGCTGCGNCAGTANTNACNCNCNCNCT > SRR4302533.108171/1‑94 (MQ=60)
TACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCT < SRR4302533.4987013/94‑1 (MQ=60)
TACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCT < SRR4302533.133915/94‑1 (MQ=60)
CCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTT > SRR4302533.868292/1‑94 (MQ=60)
TCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGC < SRR4302533.4819113/94‑1 (MQ=60)
TCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGC < SRR4302533.458060/94‑1 (MQ=60)
ACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCG < SRR4302533.2656919/94‑1 (MQ=60)
ACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCG < SRR4302533.4844850/94‑1 (MQ=60)
GCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAGCCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGAT < SRR4302533.20723/94‑1 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCC > SRR4302533.3947882/1‑94 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCC > SRR4302533.5986290/1‑94 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCC > SRR4302533.2133783/1‑94 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCC < SRR4302533.426168/94‑1 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCAC > SRR4302533.4502911/1‑94 (MQ=60)
GTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCG > SRR4302533.535491/1‑94 (MQ=60)
GTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCG > SRR4302533.4436085/1‑94 (MQ=60)
ATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAA > SRR4302533.5823988/1‑94 (MQ=60)
ATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAA < SRR4302533.5115544/94‑1 (MQ=60)
TCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAAT < SRR4302533.5944576/94‑1 (MQ=60)
CTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATC < SRR4302533.2876628/94‑1 (MQ=60)
TTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGA > SRR4302533.3301300/1‑94 (MQ=60)
TGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAG < SRR4302533.2220850/94‑1 (MQ=60)
TGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAATAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAG > SRR4302533.5196307/1‑94 (MQ=60)
GCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGG > SRR4302533.4150932/1‑94 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC > SRR4302533.5188351/1‑94 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC > SRR4302533.5367202/1‑94 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC > SRR4302533.5383225/1‑94 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC < SRR4302533.1228617/94‑1 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC > SRR4302533.6189902/1‑94 (MQ=60)
CCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCG > SRR4302533.2706005/1‑94 (MQ=60)
CCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCG > SRR4302533.6213323/1‑94 (MQ=60)
CCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGG > SRR4302533.2909362/1‑94 (MQ=60)
CCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGG > SRR4302533.2143249/1‑94 (MQ=60)
CTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGT < SRR4302533.197191/94‑1 (MQ=60)
CTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGT < SRR4302533.4396261/94‑1 (MQ=60)
CTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGA > SRR4302533.2509594/1‑94 (MQ=60)
TTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTA > SRR4302533.4964023/1‑94 (MQ=60)
TTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTA > SRR4302533.6164512/1‑94 (MQ=60)
CTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAAT > SRR4302533.3421076/1‑94 (MQ=60)
TTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATA < SRR4302533.2771089/94‑1 (MQ=60)
TTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATA < SRR4302533.1111838/94‑1 (MQ=60)
TCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAA < SRR4302533.4367610/94‑1 (MQ=60)
TCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAA < SRR4302533.1939646/94‑1 (MQ=60)
CATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATATCGCGCCCTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAAT < SRR4302533.2163830/94‑1 (MQ=60)
CATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAAT > SRR4302533.2943303/1‑94 (MQ=60)
CATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAAT > SRR4302533.1771597/1‑94 (MQ=60)
ATCTGAGTGCCAGGCAATACCACTATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC < SRR4302533.6147948/94‑1 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAACCCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC < SRR4302533.111076/94‑1 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC > SRR4302533.4187199/1‑94 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC < SRR4302533.3041843/94‑1 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC < SRR4302533.5699793/94‑1 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGGAATAATC > SRR4302533.6192008/1‑94 (MQ=60)
CTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGC < SRR4302533.2104127/94‑1 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGT > SRR4302533.1919272/1‑94 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGT > SRR4302533.5448097/1‑94 (MQ=60)
CAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > SRR4302533.904485/1‑94 (MQ=60)
AGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGC < SRR4302533.3614215/94‑1 (MQ=60)
AGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGC > SRR4302533.5839283/1‑94 (MQ=60)
AGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGC < SRR4302533.1438776/94‑1 (MQ=60)
CAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTTTGCCAT > SRR4302533.5916176/1‑94 (MQ=60)
CAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > SRR4302533.2445391/1‑94 (MQ=60)
CAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGACGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > SRR4302533.1913287/1‑94 (MQ=60)
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TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > NC_000913/2225104‑2225290
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
