Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,360,682 |
T→C |
A324A (GCA→GCG) |
b2249 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,360,682 | 0 | T | C | 100.0%
| 414.7
/ NA
| 131 | A324A (GCA→GCG) | b2249 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (85/46); total (85/46) |
Only 100 of 176 total aligned reads displayed.
GTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA > NC_000913/2360593‑2360771
|
gTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGcc < 2:2513537/93‑1 (MQ=255)
tGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCa > 1:4121275/1‑93 (MQ=255)
tGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCa < 2:2463422/93‑1 (MQ=255)
gAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGccc < 1:5961530/93‑1 (MQ=255)
gAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGccc > 2:2984191/1‑93 (MQ=255)
aaaCGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCg > 2:5251062/1‑93 (MQ=255)
aaCGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCgg > 1:3077721/1‑93 (MQ=255)
aaCGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCgg > 1:4325904/1‑93 (MQ=255)
aCGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGc < 2:3038874/93‑1 (MQ=255)
gCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCaa > 2:4958680/1‑93 (MQ=255)
gCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCaa < 1:1247417/93‑1 (MQ=255)
cacaCGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCaaa > 2:1944933/1‑93 (MQ=255)
acacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCaaaa < 2:3810593/93‑1 (MQ=255)
cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt < 1:6236777/93‑1 (MQ=255)
cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt < 1:2269292/93‑1 (MQ=255)
cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt > 1:6120365/1‑93 (MQ=255)
cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt < 2:3639377/93‑1 (MQ=255)
cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt < 1:3122942/93‑1 (MQ=255)
acGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATg > 1:3537732/1‑93 (MQ=255)
cGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATgg < 2:3580480/93‑1 (MQ=255)
gCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGt < 2:5878614/93‑1 (MQ=255)
gCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGt < 2:816066/93‑1 (MQ=255)
cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGtt > 1:5015904/1‑93 (MQ=255)
cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGtt < 2:1009703/93‑1 (MQ=255)
agagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTg > 2:1618365/1‑93 (MQ=255)
agagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTg < 2:4093088/93‑1 (MQ=255)
gagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTgg > 1:5807454/1‑93 (MQ=255)
gCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGcc < 1:141679/93‑1 (MQ=255)
aaaGTGCCGTCTGGCGTGGCTAGCGCGAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgc > 1:4096650/1‑93 (MQ=255)
aaaGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgc > 1:4272518/1‑93 (MQ=255)
aaaGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgc > 2:5945914/1‑93 (MQ=255)
gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGt > 1:5696451/1‑93 (MQ=255)
gcggTCGGGCGTGGCTAGCGCAAGGTTGAGATGCTCGTCCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc < 2:5989467/90‑1 (MQ=255)
gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCACGCCGTTc < 2:6110746/93‑1 (MQ=255)
gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc > 2:4152131/1‑93 (MQ=255)
gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc > 2:87707/1‑93 (MQ=255)
ccGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCt > 1:5323920/1‑93 (MQ=255)
cGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTg > 1:4199990/1‑93 (MQ=255)
gTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCAGGCAAAATGGTTGGCCCGCCGTTCTGt > 1:192245/1‑93 (MQ=255)
tCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTa > 1:4250624/1‑93 (MQ=255)
tCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTa > 2:2018758/1‑93 (MQ=255)
ggTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCa < 1:2921494/92‑1 (MQ=255)
cGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCa < 1:5533421/93‑1 (MQ=255)
tGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGt < 1:4083827/93‑1 (MQ=255)
ggCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTg > 2:4876679/1‑93 (MQ=255)
gCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTgc > 1:2433393/1‑93 (MQ=255)
aGCGCAAAGTAGAGATGCTCGTTCTCGAACCCAGAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCa < 2:5051749/93‑1 (MQ=255)
gcgcAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAg > 1:5321255/1‑93 (MQ=255)
gcgcAAAGTTGAGATGCTCGTTCTCGAAAACCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAg > 1:2460944/1‑93 (MQ=255)
gcAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGTCCCGCCGTTCTGTAATCCAGTGCGCAGtt > 2:1766562/1‑93 (MQ=255)
cAAAGTTGATGTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGttt < 2:311341/93‑1 (MQ=255)
cAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGttt > 1:709427/1‑93 (MQ=255)
cAAAGTTGAGATGCTCGTTCCCAAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGttt < 1:1015060/93‑1 (MQ=255)
aaGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgc > 1:3801141/1‑93 (MQ=255)
tggagaTGCTCGTGCTCGAACCCCGAACCAGCCACCGCCGGCCCGGCAAAGTGGTGGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGcc < 1:2893888/91‑1 (MQ=255)
gagaTGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAg < 2:2506998/93‑1 (MQ=255)
agaTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAgg < 1:1272557/93‑1 (MQ=255)
gaTGCTCGTTCTCGAACCCCGAAACAGCCAGCGCAAGCCCGGCAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg < 2:1594836/93‑1 (MQ=255)
aTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGt > 1:1673168/1‑93 (MQ=255)
aTGCTCGTCCTCAAAACCCGAAACAGCCAGCGCCAGCCCGGCAGAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGt < 2:6215234/93‑1 (MQ=255)
tctttCCCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc < 2:2839493/90‑1 (MQ=255)
tCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc > 1:5565486/1‑93 (MQ=255)
tCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc > 2:3267342/1‑93 (MQ=255)
tCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc > 1:4022865/1‑93 (MQ=255)
tCGTCCTCGAGACCCGAAACAGCCAGCGCCAGCCCGGCAAATTGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc < 2:39328/93‑1 (MQ=255)
gTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctc > 2:1299708/1‑93 (MQ=255)
ttCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc > 2:209750/1‑93 (MQ=255)
ttCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc < 1:320857/93‑1 (MQ=255)
ttCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc > 2:4409392/1‑93 (MQ=255)
cGAACCCCGAAACAGCCAGCGCCGGCCCGGAAAAAGGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCtgtg < 1:1294467/93‑1 (MQ=255)
gAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGa > 1:5131616/1‑93 (MQ=255)
aaccccAAAACGGCCGGCGCCAGCCCGGAAAATTGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa < 2:2332833/90‑1 (MQ=255)
aaaCCCGAAACAGGCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa > 2:901844/1‑93 (MQ=255)
aaaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa > 1:1081763/1‑93 (MQ=255)
aaaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa > 2:5967243/1‑93 (MQ=255)
accccGAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg < 2:1498075/91‑1 (MQ=255)
aaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg > 1:1846782/1‑93 (MQ=255)
aaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg > 2:1810883/1‑93 (MQ=255)
aCCCGAACCAGCCAGCGCCAGCCGGGAAAAGTGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAgg < 1:2828903/93‑1 (MQ=255)
aCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAgg > 1:2105015/1‑93 (MQ=255)
ccgaaaaCAGCCAGCGCCAGCCGGAAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa < 2:3900822/89‑1 (MQ=255)
cccGAACCAGCCAGCGCCAGCCCGGAAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa < 1:1179978/93‑1 (MQ=255)
cccGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa > 2:2741525/1‑93 (MQ=255)
ccGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGaa > 1:5047004/1‑93 (MQ=255)
cGAACCAGCCAGCGCCGCCCCGCCAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc < 1:2893474/93‑1 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc > 2:3613563/1‑93 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc > 1:4704929/1‑93 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc < 2:5696451/93‑1 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc > 2:5401321/1‑93 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc > 2:112244/1‑93 (MQ=255)
cGAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc < 1:896865/93‑1 (MQ=255)
gAAACACCAAGCGACAGCGCGGCAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAcc < 2:2314996/93‑1 (MQ=255)
aaaCAGCCAGCGCCGCCCGGGAAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAccg < 2:2359291/93‑2 (MQ=255)
aaaCAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAccg > 2:2158122/1‑92 (MQ=255)
aaCAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAccgc < 1:6292006/93‑3 (MQ=255)
aCAGCCAGCGCCAGCCGGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCt < 1:2714192/93‑1 (MQ=255)
aCAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCt > 2:346974/1‑93 (MQ=255)
cggCCAGCGCGACCCCGACAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCtt < 1:5287572/91‑1 (MQ=255)
cagccagcCCCAGCCGGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCtt < 2:4906138/93‑1 (MQ=255)
aGCCAGCGCCGGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCTTc < 2:1379143/93‑1 (MQ=255)
|
GTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA > NC_000913/2360593‑2360771
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA > NC_000913/2360589‑2360771
|
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGC > SRR4302533.667839/1‑94 (MQ=60)
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGC > SRR4302533.2058676/1‑94 (MQ=60)
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGC < SRR4302533.1961761/94‑1 (MQ=60)
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGC > SRR4302533.3289459/1‑94 (MQ=60)
CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGC > SRR4302533.1845993/1‑94 (MQ=60)
GTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCG > SRR4302533.3562984/1‑94 (MQ=60)
AGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCAAAACCC‑GAAACAGCCAGCGCC > SRR4302533.3056050/1‑94 (MQ=60)
GTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCA > SRR4302533.4146298/1‑94 (MQ=60)
TGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAG < SRR4302533.2132691/94‑1 (MQ=60)
GCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGC > SRR4302533.4145754/1‑94 (MQ=60)
CTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCC < SRR4302533.5352679/94‑1 (MQ=60)
GAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCG < SRR4302533.5997597/94‑1 (MQ=60)
AAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGG > SRR4302533.3096608/1‑94 (MQ=60)
AAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGG > SRR4302533.4351964/1‑94 (MQ=60)
ACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCA < SRR4302533.5441737/94‑1 (MQ=60)
CGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAACCAGCCCCAGCCCGGCCA > SRR4302533.5220927/1‑94 (MQ=60)
GCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAA < SRR4302533.1254866/94‑1 (MQ=60)
ACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAAT > SRR4302533.6157272/1‑94 (MQ=60)
CACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATG < SRR4302533.3142142/94‑1 (MQ=60)
CACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATG > SRR4302533.3559535/1‑94 (MQ=60)
CACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATG < SRR4302533.6274123/94‑1 (MQ=60)
CACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATG < SRR4302533.2283331/94‑1 (MQ=60)
CGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGT < SRR4302533.991466/94‑1 (MQ=60)
CGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGT < SRR4302533.877036/94‑1 (MQ=60)
GCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTT > SRR4302533.5046292/1‑94 (MQ=60)
CAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTG < SRR4302533.4049966/94‑1 (MQ=60)
CAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTG > SRR4302533.1442052/1‑94 (MQ=60)
AGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGG > SRR4302533.5842521/1‑94 (MQ=60)
GCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCC < SRR4302533.142584/94‑1 (MQ=60)
CGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCG > SRR4302533.2076339/1‑94 (MQ=60)
CGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCG > SRR4302533.1228422/1‑94 (MQ=60)
GAAAGTGCCGTCTGGCGTGGCTAGCGCGAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGC > SRR4302533.4121588/1‑94 (MQ=60)
GAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGC > SRR4302533.4298231/1‑94 (MQ=60)
GAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGC > SRR4302533.312508/1‑94 (MQ=60)
AAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCC < SRR4302533.3641899/94‑1 (MQ=60)
AGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGT > SRR4302533.5730863/1‑94 (MQ=60)
TGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTC > SRR4302533.2668855/1‑94 (MQ=60)
GCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCT < SRR4302533.1070552/94‑1 (MQ=60)
GCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCT > SRR4302533.5355826/1‑94 (MQ=60)
GCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCT < SRR4302533.6055574/94‑1 (MQ=60)
CCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTG > SRR4302533.4225404/1‑94 (MQ=60)
CGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGT > SRR4302533.169750/1‑94 (MQ=60)
CGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCAGGCAAAATGGTTGGCCCGCCGTTCTGT > SRR4302533.193455/1‑94 (MQ=60)
GTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTA > SRR4302533.4276270/1‑94 (MQ=60)
GTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTA > SRR4302533.4258527/1‑94 (MQ=60)
GTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTA > SRR4302533.3881855/1‑94 (MQ=60)
TCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAA < SRR4302533.4216741/94‑1 (MQ=60)
CTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAAT > SRR4302533.4811993/1‑94 (MQ=60)
TGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATC < SRR4302533.5911541/94‑1 (MQ=60)
TGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATC > SRR4302533.3324142/1‑94 (MQ=60)
GGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAG < SRR4302533.2939387/94‑1 (MQ=60)
CGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAG < SRR4302533.5566829/94‑1 (MQ=60)
CGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAG > SRR4302533.4459625/1‑94 (MQ=60)
TGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTG < SRR4302533.4108687/94‑1 (MQ=60)
GGGCTAGCGCAAAGTAAAGATGCTCGTTCTCAAACCCC‑GAAACAGCCAGCGCCAGCCGGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTG < SRR4302533.2463567/94‑1 (MQ=60)
GGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGC > SRR4302533.2448428/1‑94 (MQ=60)
GGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGC > SRR4302533.1268620/1‑94 (MQ=60)
GCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCG > SRR4302533.6196654/1‑94 (MQ=60)
AGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAG > SRR4302533.5353144/1‑94 (MQ=60)
AGCGCAAAGTTGAGATGCTCGTTCTCGAAAACC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAG > SRR4302533.2476129/1‑94 (MQ=60)
GCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTT > SRR4302533.713617/1‑94 (MQ=60)
CAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAACCAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTG < SRR4302533.2909915/94‑1 (MQ=60)
CAAAGTTGAGATGCTCGTTCCCAAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTG < SRR4302533.1021021/94‑1 (MQ=60)
AAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGC > SRR4302533.3824405/1‑94 (MQ=60)
TGGAGATGCTCGTGCTCGAACCCC‑GAACCAGCCACCGCCGGCCCGGCAAAGTGGTGGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCA < SRR4302533.2911670/94‑1 (MQ=48)
AGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGG < SRR4302533.1280173/94‑1 (MQ=60)
GATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGT > SRR4302533.1683281/1‑94 (MQ=60)
ATGTTCGTTCTCAAACCCC‑GAACCAGCCGGCGCCAGCCCGGCAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTT < SRR4302533.1401884/94‑1 (MQ=60)
ATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTT < SRR4302533.5114008/94‑1 (MQ=60)
TGCGCGTTCTCGAACCCC‑AAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTT < SRR4302533.4332197/94‑1 (MQ=60)
CTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCC > SRR4302533.4047359/1‑94 (MQ=60)
CTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCC > SRR4302533.5599124/1‑94 (MQ=60)
CTCGTTCTAGAACCCG‑GAACCAGCCAGCGCAAGCCGGGCAAAATGTTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCC < SRR4302533.2930834/94‑1 (MQ=60)
TCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCT > SRR4302533.5579991/1‑94 (MQ=60)
TTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCT < SRR4302533.322818/94‑1 (MQ=60)
CGAACCCC‑GAAACAGCCAGCGCCGGCCCGGAAAAAGGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGA < SRR4302533.1302260/94‑1 (MQ=60)
CGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGA > SRR4302533.5162613/1‑94 (MQ=60)
CGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGA > SRR4302533.2443288/1‑94 (MQ=60)
GAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAA > SRR4302533.1088145/1‑94 (MQ=60)
GAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAA > SRR4302533.1127046/1‑94 (MQ=60)
AAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAG > SRR4302533.1858042/1‑94 (MQ=60)
AACCCGGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAG < SRR4302533.5634935/94‑1 (MQ=60)
AACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGG > SRR4302533.2117996/1‑94 (MQ=60)
ACCC‑GAACCAGCCAGCGCCAGCCGGGAAAAGTGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGA < SRR4302533.2846308/94‑1 (MQ=60)
CCC‑GAACCAGCCAGCGCCAGCCCGGAAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAA < SRR4302533.1187066/94‑1 (MQ=60)
CCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAA > SRR4302533.5077534/1‑94 (MQ=60)
CC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAC > SRR4302533.4733446/1‑94 (MQ=60)
C‑GAACCAGCCAGCGCCGCCCCGCCAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACC < SRR4302533.2911256/94‑1 (MQ=60)
C‑GAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACC > SRR4302533.2836604/1‑94 (MQ=60)
C‑GAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACC < SRR4302533.902130/94‑1 (MQ=60)
AACAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCT < SRR4302533.6329522/94‑1 (MQ=60)
ACAGCCAGCGCCAGCCGGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCTT < SRR4302533.2730858/94‑1 (MQ=60)
CAGCCAGCGCCATCCCGCAAAAATGTTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCTTC < SRR4302533.5881757/94‑1 (MQ=60)
CCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCGCTTCACA > SRR4302533.6334041/1‑94 (MQ=60)
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CGTAGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA > NC_000913/2360589‑2360771
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
