Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,419,074 |
A→G |
N145S (AAC→AGC) |
yfcG → |
putative S‑transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,419,074 | 0 | A | G | 99.6%
| 805.4
/ ‑4.6
| 249 | N145S (AAC→AGC) | yfcG | putative S‑transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (122/126); minor base C (1/0); total (123/126) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
Only 100 of 252 total aligned reads displayed.
ATCATCATTTTAATCACGCAGCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418984‑2419163
|
catcattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCa > 2:4612638‑M2/22‑93 (MQ=255)
tcattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAg > 1:4769216‑M2/20‑93 (MQ=255)
tcattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAg > 1:6234563‑M2/20‑93 (MQ=255)
cattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGc > 1:1230030‑M2/19‑93 (MQ=255)
cattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGc < 1:1678016‑M2/75‑1 (MQ=255)
tttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGAGGc > 2:1171212‑M2/16‑93 (MQ=255)
ttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCt > 1:3223942‑M2/15‑93 (MQ=255)
ttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCt < 1:3018484‑M2/79‑1 (MQ=255)
ttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCt < 2:3751956‑M2/79‑1 (MQ=255)
aatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTgg < 2:297225‑M2/81‑1 (MQ=255)
aatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTgg < 1:388148‑M2/81‑1 (MQ=255)
atcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGa > 1:259677‑M2/12‑93 (MQ=255)
cgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAAc < 2:4865643‑M2/86‑1 (MQ=255)
ccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCGTGTACTGAGCAAGCGGCTGGA‑AAACTCGcc < 2:2141783‑M2/91‑1 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTTCCATGTACTGAGCAAGCGGCTGGA‑AAACCCGccc < 2:1433095‑M2/92‑1 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGccc < 2:4096669‑M2/92‑1 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGccc < 1:1851261‑M2/92‑1 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTTAGCAAGCGGCTGGA‑AAACTCGCCct < 1:5570414/93‑1 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGTA‑AAACTCGCCct > 2:2911638/1‑93 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCct < 1:4959763/93‑1 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCCCCct > 1:2845585/1‑93 (MQ=255)
cccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctg > 2:44998/1‑93 (MQ=255)
ccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctgg > 2:25662/1‑93 (MQ=255)
ccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctgg > 2:2743496/1‑93 (MQ=255)
cAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctggctg > 2:5604835/1‑93 (MQ=255)
aaaCCATTCCTTACGCTATTGAGCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctggctgg < 2:5769885/93‑1 (MQ=255)
aaaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctggctgg > 1:3732487/1‑93 (MQ=255)
aaaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCctggctgg > 1:4329349/1‑93 (MQ=255)
aCCATTCCTTACGCTATTGAACGTTATTAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGa > 1:4189453/1‑93 (MQ=255)
aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGa < 1:5487465/93‑1 (MQ=255)
aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGa < 2:6019839/93‑1 (MQ=255)
ccATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAg < 2:757233/93‑1 (MQ=255)
cATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAGAAACT‑GCACCGGCTGGGAgg > 2:4376486/1‑93 (MQ=255)
aTTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGc < 2:3580253/93‑1 (MQ=255)
ttCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCg > 1:4172703/1‑93 (MQ=255)
tCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCga < 2:1051686/93‑1 (MQ=255)
cTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCgaga < 1:3611568/93‑1 (MQ=255)
cTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCgaga < 2:2473460/93‑1 (MQ=255)
ttACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGGGCCgagac > 2:1736536/1‑92 (MQ=255)
ttACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGaa > 1:4402708/1‑93 (MQ=255)
tACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAAc < 2:4179076/93‑1 (MQ=255)
aCGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACt > 1:3071743/1‑93 (MQ=255)
cTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTCGCTGGGACGCGGGAACTACa > 1:5904378/1‑93 (MQ=255)
tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAg > 1:5558108/1‑93 (MQ=255)
tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAg < 2:6120350/93‑1 (MQ=255)
aTTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGc < 1:878178/93‑1 (MQ=255)
ttGAACGTTATCAGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCa < 1:1006301/93‑1 (MQ=255)
gatggTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGACTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAtt < 2:3200072/89‑1 (MQ=255)
gAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAtt > 1:5328489/1‑93 (MQ=255)
gAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAtt > 2:3961165/1‑93 (MQ=255)
gAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAtt > 1:3542484/1‑93 (MQ=255)
gAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAAATACAGAAtt > 1:1095267/1‑93 (MQ=255)
aCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGc > 2:3934408/1‑93 (MQ=255)
cGTTATCAGGTTGAAACTCAGCGTCCTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCg > 1:2156243/1‑93 (MQ=255)
gTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCgg > 1:3782771/1‑93 (MQ=255)
ttATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGa < 1:6104765/93‑1 (MQ=255)
aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGata < 1:40450/93‑1 (MQ=255)
aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGata < 2:5882973/93‑1 (MQ=255)
aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGata > 1:2406921/1‑93 (MQ=255)
tCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGatat > 2:5152684/1‑93 (MQ=255)
cAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAtt < 1:5153455/93‑1 (MQ=255)
cAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAtt < 2:497479/93‑1 (MQ=255)
cAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAtt < 1:3403172/93‑1 (MQ=255)
gTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTTCGGATATTGcc > 2:2819525/1‑93 (MQ=255)
gTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGcc > 2:5470404/1‑93 (MQ=255)
gTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGcc > 1:5241951/1‑93 (MQ=255)
ttGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCct < 1:4580294/93‑1 (MQ=255)
ttGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCct < 1:4477694/93‑1 (MQ=255)
gAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgc < 1:5611502/93‑1 (MQ=255)
gAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgc < 1:4738052/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg < 2:202919/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg < 2:5379189/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg < 1:666704/93‑1 (MQ=255)
tCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGcc < 2:3159554/93‑1 (MQ=255)
cAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCg > 2:5620309/1‑93 (MQ=255)
aGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGt < 2:875805/93‑1 (MQ=255)
gCGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTg > 1:2274816/1‑93 (MQ=255)
cGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTgg < 2:2305973/93‑1 (MQ=255)
cGTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTgg < 1:2444802/93‑1 (MQ=255)
gTCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTggg > 1:3997682/1‑93 (MQ=255)
tCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTTGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGt > 1:6007060/1‑93 (MQ=255)
tCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGt > 2:427517/1‑93 (MQ=255)
tCTTTACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGt > 2:2079459/1‑93 (MQ=255)
tttACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa < 1:1375920/93‑1 (MQ=255)
tttACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa > 1:678619/1‑93 (MQ=255)
tttACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa > 1:1911129/1‑93 (MQ=255)
ttACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTaa < 2:1836187/93‑1 (MQ=255)
ttACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGGTaa > 2:2364273/1‑93 (MQ=255)
tACCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAt < 2:80200/93‑1 (MQ=255)
aCCATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg > 2:1236446/1‑93 (MQ=255)
cATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGcc > 2:5557435/1‑93 (MQ=255)
cATGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGcc < 2:1870481/93‑1 (MQ=255)
aTGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt > 1:5830155/1‑93 (MQ=255)
aTGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt > 1:3351785/1‑93 (MQ=255)
tGTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg > 1:1552276/1‑93 (MQ=255)
gTACTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTgg > 2:608655/1‑93 (MQ=255)
aCTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGAc < 2:240023/93‑1 (MQ=255)
aCTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGAc > 2:4805869/1‑93 (MQ=255)
cTGAGCAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACt > 1:2481262/1‑93 (MQ=255)
tGAGCAAGCGGATGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTc > 2:3678659/1‑93 (MQ=255)
|
ATCATCATTTTAATCACGCAGCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGA‑AAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418984‑2419163
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATCATCATTTTAATCACGCAG‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCC > NC_000913/2418983‑2419166
|
AATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAG < SRR4302533.4925753/94‑1 (MQ=60)
AATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAG < SRR4302533.1521645/94‑1 (MQ=60)
ATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAACCTCAGCGTCTTTACCATGTACTGAGC > SRR4302533.1037279/1‑94 (MQ=60)
ATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGC > SRR4302533.5024761/1‑94 (MQ=60)
ATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAG > SRR4302533.6271892/1‑94 (MQ=60)
ATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAG > SRR4302533.4798123/1‑94 (MQ=60)
TCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGC > SRR4302533.1237393/1‑94 (MQ=60)
TCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGC < SRR4302533.4637305/94‑1 (MQ=60)
CATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCG < SRR4302533.4022189/94‑1 (MQ=60)
CATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCG > SRR4302533.298747/1‑94 (MQ=60)
CATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCG < SRR4302533.1688180/94‑1 (MQ=60)
ATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGG < SRR4302533.2466723/94‑1 (MQ=60)
TTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGAGTCTTTACCATGTACTGAGCAAGCGGC > SRR4302533.2664411/1‑94 (MQ=60)
TTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCT > SRR4302533.3243820/1‑94 (MQ=60)
TTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTG < SRR4302533.909459/94‑1 (MQ=60)
TTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTG < SRR4302533.3846847/94‑1 (MQ=60)
TTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTG < SRR4302533.3036944/94‑1 (MQ=60)
TTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTG < SRR4302533.5898591/94‑1 (MQ=60)
TAATCACGCAGC‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCAGCTGGA > SRR4302533.5599712/1‑94 (MQ=60)
AATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA < SRR4302533.390489/94‑1 (MQ=60)
AATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA > SRR4302533.261254/1‑94 (MQ=60)
CGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACT < SRR4302533.676615/94‑1 (MQ=60)
agccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGC < SRR4302533.5297237/90‑1 (MQ=60)
gccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCC < SRR4302533.1125213/91‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302533.1862548/94‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT > SRR4302533.3921899/1‑94 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCCCCCT > SRR4302533.2863096/1‑94 (MQ=60)
CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTTAGCAAGCGGCTGGAAAACTCGCCCTG < SRR4302533.5604085/94‑1 (MQ=60)
CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTG < SRR4302533.200263/94‑1 (MQ=60)
CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTG < SRR4302533.4989810/94‑1 (MQ=60)
CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTG < SRR4302533.3057312/94‑1 (MQ=60)
CCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTCCTGAGCAAGCGGCTGGAAAACTCGCCCTGG < SRR4302533.2512716/94‑1 (MQ=60)
CCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGG > SRR4302533.4225554/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302533.3706271/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG < SRR4302533.2310555/94‑1 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302533.5962189/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302533.1822151/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCCGGCTG > SRR4302533.5552280/1‑94 (MQ=60)
CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTTGCCCTGGCTGG > SRR4302533.2729695/1‑94 (MQ=60)
CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGG > SRR4302533.4355433/1‑94 (MQ=60)
CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGG > SRR4302533.622112/1‑94 (MQ=60)
CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGG > SRR4302533.3755385/1‑94 (MQ=60)
CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGG > SRR4302533.1072475/1‑94 (MQ=60)
AAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGG > SRR4302533.4176804/1‑94 (MQ=60)
AAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGG < SRR4302533.4557717/94‑1 (MQ=60)
AACCATTCCTTACGCTATTGAACGTTATTAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGA > SRR4302533.4214816/1‑94 (MQ=60)
AACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGA > SRR4302533.1715620/1‑94 (MQ=60)
ACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAG < SRR4302533.5520546/94‑1 (MQ=60)
ACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAG > SRR4302533.444050/1‑94 (MQ=60)
ACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAG < SRR4302533.223204/94‑1 (MQ=60)
CCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGG > SRR4302533.5222841/1‑94 (MQ=60)
CCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGG < SRR4302533.1909870/94‑1 (MQ=60)
ATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCG > SRR4302533.4197989/1‑94 (MQ=60)
ATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCG < SRR4302533.5477650/94‑1 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAG < SRR4302533.5687529/94‑1 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAG < SRR4302533.5035392/94‑1 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAG < SRR4302533.6115250/94‑1 (MQ=60)
CCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGA < SRR4302533.3037456/94‑1 (MQ=60)
CTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAA < SRR4302533.3633795/94‑1 (MQ=60)
CTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAA > SRR4302533.5594822/1‑94 (MQ=60)
CTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAA > SRR4302533.4429289/1‑94 (MQ=60)
TTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAC < SRR4302533.4768830/94‑1 (MQ=60)
TTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAC < SRR4302533.1577981/94‑1 (MQ=60)
TACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACT > SRR4302533.3090603/1‑94 (MQ=60)
GCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACA < SRR4302533.675128/94‑1 (MQ=60)
GCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTCGCTGGGACGCGGGAACTACA > SRR4302533.5940038/1‑94 (MQ=60)
CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAG > SRR4302533.5591697/1‑94 (MQ=60)
CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAG < SRR4302533.4660140/94‑1 (MQ=60)
CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAG < SRR4302533.5615920/94‑1 (MQ=60)
ATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCA < SRR4302533.883333/94‑1 (MQ=60)
TTGAACGTTATCAGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAT < SRR4302533.1012187/94‑1 (MQ=60)
TTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCAT < SRR4302533.3935484/94‑1 (MQ=60)
TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATT > SRR4302533.5360421/1‑94 (MQ=60)
TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATT > SRR4302533.3564317/1‑94 (MQ=60)
TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAATACAGAATT > SRR4302533.1101750/1‑94 (MQ=60)
GAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTG > SRR4302533.2492464/1‑94 (MQ=60)
ACGTTATCAGGTTGAAACTCAGCGTCCTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCG > SRR4302533.2169518/1‑94 (MQ=60)
CGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGG > SRR4302533.3805938/1‑94 (MQ=60)
CGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGG > SRR4302533.4271116/1‑94 (MQ=60)
GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGA > SRR4302533.6028926/1‑94 (MQ=60)
GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGA > SRR4302533.3253545/1‑94 (MQ=60)
TTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGAT < SRR4302533.6141629/94‑1 (MQ=60)
TATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATA > SRR4302533.3848276/1‑94 (MQ=60)
TATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATA > SRR4302533.2421788/1‑94 (MQ=60)
ATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAT < SRR4302533.40724/94‑1 (MQ=60)
ATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAT > SRR4302533.2438356/1‑94 (MQ=60)
AGCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAT < SRR4302533.3504295/94‑1 (MQ=60)
TCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATT < SRR4302533.82130/94‑1 (MQ=60)
CAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTG < SRR4302533.5184583/94‑1 (MQ=60)
CAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTG < SRR4302533.3424185/94‑1 (MQ=60)
AGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGC > SRR4302533.1445737/1‑94 (MQ=60)
GGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCC > SRR4302533.5273460/1‑94 (MQ=60)
GTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCT < SRR4302533.3092478/94‑1 (MQ=60)
TTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTG < SRR4302533.4608051/94‑1 (MQ=60)
TTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTG < SRR4302533.4504784/94‑1 (MQ=60)
TTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTG < SRR4302533.1512775/94‑1 (MQ=60)
GAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGGGAGAACTACAGCATTGCGGATATTGCCTGCT > SRR4302533.4203420/1‑94 (MQ=60)
GAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCT < SRR4302533.5645419/94‑1 (MQ=60)
GAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCT < SRR4302533.4766781/94‑1 (MQ=60)
AACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG < SRR4302533.670643/94‑1 (MQ=60)
AACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG > SRR4302533.3779154/1‑94 (MQ=60)
ACTCAGCGTCTTTACCATGTACTGACCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGC > SRR4302533.3279877/1‑94 (MQ=60)
CTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGATGCGAGACCTACAGCATTGCGGATATTGCCTGCTGGCC > SRR4302533.2001437/1‑94 (MQ=60)
CTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCC > SRR4302533.5191204/1‑94 (MQ=60)
CTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCC < SRR4302533.3602003/94‑1 (MQ=60)
CTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCC > SRR4302533.4373594/1‑94 (MQ=60)
CAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGT > SRR4302533.6251186/1‑94 (MQ=60)
AGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG > SRR4302533.2288901/1‑94 (MQ=60)
AGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG > SRR4302533.4804538/1‑94 (MQ=60)
GCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGG < SRR4302533.1280656/94‑1 (MQ=60)
CGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGG < SRR4302533.2459892/94‑1 (MQ=60)
CGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGG > SRR4302533.4022022/1‑94 (MQ=60)
GTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTTGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGT > SRR4302533.6043454/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA > SRR4302533.710908/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA > SRR4302533.5445109/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA > SRR4302533.682631/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA > SRR4302533.1922791/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA < SRR4302533.3726097/94‑1 (MQ=60)
TTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAA < SRR4302533.1384201/94‑1 (MQ=60)
TTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAT < SRR4302533.4113283/94‑1 (MQ=60)
TACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG > SRR4302533.664773/1‑94 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT > SRR4302533.3372490/1‑94 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT > SRR4302533.5865387/1‑94 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT < SRR4302533.2401680/94‑1 (MQ=60)
ATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG < SRR4302533.3511443/94‑1 (MQ=60)
ATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG > SRR4302533.1561622/1‑94 (MQ=60)
TGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGG > SRR4302533.3403712/1‑94 (MQ=60)
GTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGA > SRR4302533.5754498/1‑94 (MQ=60)
ACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACT < SRR4302533.4442647/94‑1 (MQ=60)
ACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACT > SRR4302533.2496566/1‑94 (MQ=60)
CTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGTGTTAATGCCTGGACcg > SRR4302533.1231105/1‑92 (MQ=60)
CTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > SRR4302533.4831605/1‑94 (MQ=60)
AGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCC < SRR4302533.4719100/94‑1 (MQ=60)
|
AATCATCATTTTAATCACGCAG‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCC > NC_000913/2418983‑2419166
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
