Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,574,803 |
A→G |
L532P (CTG→CCG) |
b2463 ← |
putative multimodular enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,574,803 | 0 | A | G | 99.1%
| 333.4
/ NA
| 109 | L532P (CTG→CCG) | b2463 | putative multimodular enzyme |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (100/8); minor base C (1/0); total (101/8) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 163 total aligned reads displayed.
TCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCAGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGAT > NC_000913/2574713‑2574892
|
aTGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCTCCACGCTGAACCATGATCGCGCC‑GATCACCGTCGGGTGACTGATTGgcgc > 2:2666378/1‑93 (MQ=255)
tGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGcc < 1:4971129/93‑1 (MQ=255)
gATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGccc > 1:2282430/1‑93 (MQ=255)
aTAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCg < 2:622471/93‑1 (MQ=255)
tAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGc > 2:3913907/1‑93 (MQ=255)
aaaTCCCCCACCCTCCCGCAAACAGTTGCATCGGCTCCCCCACGCTGAACCATAACCGCGCC‑GATCACTGTCGGGTTACTGATGGccgcccgc < 2:4594997/92‑1 (MQ=255)
aTCACCCACCGTACCGCAAATCATTGCATCGTCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTg < 1:5925174/93‑1 (MQ=255)
aTCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTg > 2:2392412/1‑93 (MQ=255)
aTCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTg < 2:803025/93‑1 (MQ=255)
tCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTgc > 2:4811372/1‑93 (MQ=255)
tCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGGTACTGATCGGCGCCCGCTgc > 2:4824854/1‑93 (MQ=255)
acccaccGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTgcgc > 2:5127200/1‑93 (MQ=255)
ccccccGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGACCCATGATCGCGCC‑GTTCACTGTCGGGTTACTGATCGGCGCCCGCTGCGcc < 1:4076569/93‑1 (MQ=255)
ccaccGTACCGAAAATCATTGCATCCGCTCCCCCACGCTAACCCATGACCGCGCC‑GATCCCTGTGGGTTTACTGCCCGGCGCCCGCTGCGCCt < 2:3479667/93‑1 (MQ=255)
accGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGt > 2:1432743/1‑93 (MQ=255)
cGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTc > 2:1975249/1‑93 (MQ=255)
cGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTc > 2:3732904/1‑93 (MQ=255)
cGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTc > 2:436260/1‑93 (MQ=255)
aCCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTg > 1:497842/1‑93 (MQ=255)
gaaaaTCATTGCAGCGCCTCCCCCACGTTGAACCATGATCGCGCC‑GATCACGGTCGGGTTACGGATGGGCGCCCGCTGCGCCTGTTCCTGAGt < 2:5005942/91‑1 (MQ=255)
gCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAgg > 1:4446595/1‑92 (MQ=255)
cAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGGTACTGATCGGCGCCCGCTGCGCCTGGTCCTGAGTg > 2:335215/1‑93 (MQ=255)
aaTCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAc > 1:5808091/1‑93 (MQ=255)
aaTCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAc > 1:5145629/1‑93 (MQ=255)
aaTCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGGTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAc > 1:5968017/1‑93 (MQ=255)
tCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAcgc > 1:4276856/1‑93 (MQ=255)
tCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAcgc > 2:2282279/1‑93 (MQ=255)
tCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAcgc > 2:5038608/1‑93 (MQ=255)
tttGCCTCGCCTCCCCCCCGC‑AAACCCTGGTCGCCCCGGATCCCGGTGGGGTTCCTGACCGCCGCCCGCTGCGCCTGTTCCTGAGTGAcgccg < 2:4758677/92‑1 (MQ=255)
aTTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAcgccg > 2:885770/1‑93 (MQ=255)
ttGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGGTACTGATCGGGGCCCGCCGCGCCTGTTCCCGAGAGAcgccgc > 2:5326392/1‑93 (MQ=255)
tGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCcgcg > 1:456883/1‑93 (MQ=255)
gCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGa > 2:1526502/1‑93 (MQ=255)
aTCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACg > 2:365336/1‑93 (MQ=255)
cGGCTCCCCCCCGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCt < 2:3073774/93‑1 (MQ=255)
cGGCTCCCCCACGCTGAACCATGACCGCGCC‑GATCACTGTCGGTTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCt < 2:2549018/93‑1 (MQ=255)
ggCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCtt > 1:6212679/1‑93 (MQ=255)
tcccccccGCTGACCCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCAt < 2:2103716/91‑1 (MQ=255)
ccccccACGCTGACCCAGGACCGCGCT‑GCTCTTTGGGGGTTTGCTGCCCGGCCCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCAt < 2:3361186/91‑1 (MQ=255)
tCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTTGTCCTGAGTGACGCCGCGACGCTTCATg > 1:1450180/1‑93 (MQ=255)
tCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATg > 1:5650067/1‑93 (MQ=255)
tCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATg > 2:4429768/1‑93 (MQ=255)
tCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATg > 1:3910246/1‑93 (MQ=255)
ccccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGa > 1:4032275/1‑93 (MQ=255)
cccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAt > 2:2871088/1‑93 (MQ=255)
cccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAt > 2:5802737/1‑93 (MQ=255)
cccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAt > 1:297790/1‑93 (MQ=255)
cccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAt > 1:3494567/1‑93 (MQ=255)
cccACGCTAAACCATGACCGCGCC‑GATCACTGTGGGGTTACTGACCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAt < 1:5618381/93‑1 (MQ=255)
ccACGCTGCACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATc > 2:6151995/1‑93 (MQ=255)
ccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATc < 2:5965778/93‑1 (MQ=255)
ccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATc > 2:9229/1‑93 (MQ=255)
ccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATc > 1:1048823/1‑93 (MQ=255)
ccACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATc > 2:2086684/1‑93 (MQ=255)
cACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCt > 2:1672578/1‑93 (MQ=255)
cACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCt > 1:5197578/1‑93 (MQ=255)
aCGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTg > 2:4435599/1‑93 (MQ=255)
aCGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTg > 2:1438422/1‑93 (MQ=255)
cGCTGAGCCATGACCGCGCA‑GATCTCTGTGGGGTTCCTGACGGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTgg < 1:1893116/93‑1 (MQ=255)
gCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGa > 1:243394/1‑93 (MQ=255)
gCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGa > 1:635869/1‑93 (MQ=255)
ctaaaCCATGCTCGCGCG‑ATTCGTGGTGGGTTTACTGCCCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGaa < 2:2376577/90‑1 (MQ=255)
gAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGt > 2:4529694/1‑93 (MQ=255)
gAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGAGCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGt < 1:2752266/93‑1 (MQ=255)
aCCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTAt > 1:2839298/1‑93 (MQ=255)
ccATGACCGCGCC‑GCTCCCTGTCGGGTTACTGATCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTAtt < 1:3144389/93‑1 (MQ=255)
ccATGACCGCGCC‑GATCTCGGTCGGTTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTAtt < 2:533761/93‑1 (MQ=255)
cATGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTc > 1:4703417/1‑93 (MQ=255)
aTGATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCg > 1:6100839/1‑93 (MQ=255)
gATCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGt < 1:4604271/93‑1 (MQ=255)
aTCGCGCC‑GATCGCTGTGGGGTTACTGATGGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTc < 2:4607747/93‑1 (MQ=255)
tCGCGCC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTcc > 1:5098306/1‑93 (MQ=255)
cgcgCC‑GATCGCTGTGGGTTTCCTGCTCGGCCCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCa < 2:2479494/93‑1 (MQ=255)
cgcC‑GACCACTGTGGGGTTACTGATCGGCCCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGt < 1:406348/93‑1 (MQ=255)
gcC‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTa > 1:1011830/1‑93 (MQ=255)
cc‑GATCACTGTGGGGTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTAc < 1:4826135/93‑1 (MQ=255)
cc‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTAc > 1:387957/1‑93 (MQ=255)
c‑GATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTAct > 1:1517985/1‑93 (MQ=255)
gATCACTGTCGGGTTAGTGATCGGCGGCCGCTCCGCCTGTTCCTGTGTGACGCCGCGACGATTTATGAGCTGGCAGTATTCTGTCCAGTAcgc > 2:3322253/1‑91 (MQ=255)
gATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTActc > 2:2713821/1‑93 (MQ=255)
gATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTActc > 2:2913483/1‑93 (MQ=255)
aTCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTActct > 2:4095370/1‑93 (MQ=255)
cACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCttt > 2:1272427/1‑93 (MQ=255)
cACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCttt > 1:3766199/1‑93 (MQ=255)
cggTCGGTTTACGGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTaa < 2:771696/91‑1 (MQ=255)
cTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTaa > 1:1469002/1‑93 (MQ=255)
cTGCCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTaa < 1:3122921/93‑1 (MQ=255)
tgtgGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTaaa < 1:3670145/93‑1 (MQ=255)
tGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTaaa > 2:5370927/1‑93 (MQ=255)
gTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAg > 2:5830089/1‑93 (MQ=255)
gTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAg < 2:1042322/93‑1 (MQ=255)
tCGGTTTCCTGAGCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAgc < 2:159866/93‑1 (MQ=255)
gggTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAgcgc > 2:2474782/1‑93 (MQ=255)
gggTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAgcgc > 2:5756512/1‑93 (MQ=255)
gtttACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGcgcg < 1:891237/91‑1 (MQ=255)
gTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGcgg > 1:2071435/1‑93 (MQ=255)
tACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGcggat > 1:2005671/1‑93 (MQ=255)
tACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGcggat > 2:3220784/1‑93 (MQ=255)
aCTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGcggatc > 2:5648324/1‑93 (MQ=255)
aTCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGcggatcggat < 2:3091780/93‑1 (MQ=255)
|
TCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCC‑GATCACTGTCGGGTTACTGATCAGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGAT > NC_000913/2574713‑2574892
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCAGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGATTCGT > NC_000913/2574710‑2574896
|
TGTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCG > SRR4302533.895141/1‑94 (MQ=60)
TGTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCG < SRR4302533.2839844/94‑1 (MQ=60)
GTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCTG > SRR4302533.5548449/1‑94 (MQ=60)
GTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGG < SRR4302533.5516179/94‑1 (MQ=60)
TTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGC < SRR4302533.3157625/94‑1 (MQ=60)
TGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCC < SRR4302533.5001269/94‑1 (MQ=60)
TGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCC > SRR4302533.2296559/1‑94 (MQ=60)
ATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGC > SRR4302533.1199595/1‑94 (MQ=60)
ATCACCCACCGTACCGCAAATCATTGCATCGTCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGC < SRR4302533.5960995/94‑1 (MQ=60)
ATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGC > SRR4302533.4684451/1‑94 (MQ=60)
CACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGC > SRR4302533.4616550/1‑94 (MQ=60)
CCCCCCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGACCCATGATCGCGCCGTTCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCT < SRR4302533.4101383/94‑1 (MQ=60)
CCCCCCGTACCGCAAATCATTGCATCGCCTCCCCCCCGCTGACCCATGACCGCGCCGATCACTGTGGGTTTACTGATCGGCGCCCGCTGCGCCT < SRR4302533.3774552/94‑1 (MQ=55)
CCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTG > SRR4302533.620134/1‑94 (MQ=60)
CGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCCCCTGTTCC > SRR4302533.3792826/1‑94 (MQ=60)
GTCCCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGTTTACTGATCGGCGCCCGCTGCGCCTGTTCCT < SRR4302533.748323/94‑1 (MQ=60)
GTACCGCAAATCATTGCATCGGCTTCCCCACGCTGACCCGTGATCGCGCCGATCACTGTGGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCT < SRR4302533.2927359/94‑1 (MQ=60)
TACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTG > SRR4302533.500809/1‑94 (MQ=60)
CCCGCAAATCTTTGCTTCGCCTCCCCCCCGCTGACCCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGA < SRR4302533.2608319/94‑1 (MQ=60)
CCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGCTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAG > SRR4302533.6120994/1‑94 (MQ=60)
CGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGG > SRR4302533.4473489/1‑94 (MQ=60)
CAAATCATTGCATCGCCTCCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGTTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGA < SRR4302533.4741769/94‑1 (MQ=60)
CAAACCATTCCATCGCCTCCCCCACGCTGACCCATGACCCCGCCGATCCCTGTCGGTTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGA < SRR4302533.1619224/94‑1 (MQ=44)
aaatctttgaatggcCTTCCCCACCCTGAACCATGACCGCGCCGATCACTGGCGGGTTACTGTTCGGCGCCCGCTGCGCCTGTTCCTGAGTGAC < SRR4302533.1041989/79‑1 (MQ=60)
AAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAC > SRR4302533.5843164/1‑94 (MQ=60)
AAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAC > SRR4302533.5176728/1‑94 (MQ=60)
AAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGGTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGAC > SRR4302533.6004145/1‑94 (MQ=60)
aatcatcccacggcctcccccccgctaaaccatgaccccccggacCACTGTCGGTTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACG < SRR4302533.5740653/49‑1 (MQ=60)
ATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGC > SRR4302533.4302577/1‑94 (MQ=60)
tatggcatcgcctcccccacgctaacccaggacCGCGCCGATCCCTGGGGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCG < SRR4302533.222019/61‑1 (MQ=54)
CATTCCATGGGCTTCCCCACGCTGACCCATGATCGCGCCGATCACTGTCGGGTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCG < SRR4302533.4043751/94‑1 (MQ=60)
ATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGC > SRR4302533.5655301/1‑94 (MQ=60)
TTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCG > SRR4302533.459614/1‑94 (MQ=60)
TTCCATCGGCTCCCCCCCGCTAAACCATGACCGCCCCGATCACTGCGGGGTTACTGACGGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCG < SRR4302533.4948825/94‑1 (MQ=36)
ATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGC > SRR4302533.5930483/1‑94 (MQ=60)
TGGGCTCCCCCACGCTGACCCATGACGGCCCCGATCAGTGTGGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCT < SRR4302533.1770116/94‑1 (MQ=60)
CGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTT > SRR4302533.6249932/1‑94 (MQ=60)
CGGCTCCCCCCCGCTGACCCATGACCGCGCCGATCCCTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTT < SRR4302533.994799/94‑1 (MQ=60)
CTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGGTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACACCGCGACGCTTCAT > SRR4302533.2252557/1‑94 (MQ=60)
TTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTTGTCCTGAGTGACGCCGCGACGCTTCATG > SRR4302533.1458931/1‑94 (MQ=60)
TTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATG > SRR4302533.3934125/1‑94 (MQ=60)
TTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATG > SRR4302533.5684221/1‑94 (MQ=60)
TCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGA > SRR4302533.4056821/1‑94 (MQ=60)
CCCCCCGCTGACCCATGACCGCGCCGATCACTGTGGGGTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAT < SRR4302533.1526624/94‑1 (MQ=60)
CCCCCCGCTGAACCATAATCGCGCCGATCCCTGTCGGGTTACTGTTGGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAT < SRR4302533.3953701/94‑1 (MQ=60)
CCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAT > SRR4302533.299614/1‑94 (MQ=60)
CCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGAT > SRR4302533.3516121/1‑94 (MQ=60)
CCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATC > SRR4302533.1054990/1‑94 (MQ=60)
CCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATC > SRR4302533.4987657/1‑94 (MQ=60)
CCCACGCTAAACCATGACCGCGCCGATCACTGTGGGGTTACTGACCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATC < SRR4302533.5652339/94‑1 (MQ=60)
cacccctgacCCATGTTCGCGCCGATCCCTGTCGGTTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCT < SRR4302533.1553818/84‑1 (MQ=60)
CCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCT > SRR4302533.5228922/1‑94 (MQ=60)
cccgctaacCCATGATCGCGCCGATCACTGTCGGGTTTCTAATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTG < SRR4302533.4104872/85‑1 (MQ=60)
CGCTGAGCCATGACCGCGCAGATCTCTGTGGGGTTCCTGACGGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGA < SRR4302533.1904675/94‑1 (MQ=57)
CGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGA > SRR4302533.244903/1‑94 (MQ=60)
CGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGA > SRR4302533.639610/1‑94 (MQ=60)
gtggacCCATGATCCCGCCGATCCCGGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAA < SRR4302533.1611380/88‑1 (MQ=60)
GCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCG‑CGCTTCATtaacatgcag > SRR4302533.2884515/1‑84 (MQ=60)
GAACCATGATCGCGCCGATCACTGTCGGGTTACTGAGCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTA < SRR4302533.2769144/94‑1 (MQ=60)
AACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTAT > SRR4302533.3199392/1‑94 (MQ=60)
AACCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTAT > SRR4302533.2856770/1‑94 (MQ=60)
CCATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTC > SRR4302533.4731928/1‑94 (MQ=60)
CCATGACCGCGCCGCTCCCTGTCGGGTTACTGATCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTC < SRR4302533.3163720/94‑1 (MQ=60)
CATGATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCG > SRR4302533.6137678/1‑94 (MQ=60)
GATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTC < SRR4302533.4632164/94‑1 (MQ=60)
GATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGGGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTC > SRR4302533.2068678/1‑94 (MQ=60)
ATCGCGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCC > SRR4302533.5129107/1‑94 (MQ=60)
TCGCGCGGATCACTGGGGGGTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCA < SRR4302533.2901983/94‑1 (MQ=60)
CGCGCCGATCTGTGTGGGGTTACGGATCGCCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAG < SRR4302533.2592062/94‑1 (MQ=60)
CGCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTA > SRR4302533.1017751/1‑94 (MQ=60)
CGCCGACCACTGTGGGGTTACTGATCGGCCCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTA < SRR4302533.408789/94‑1 (MQ=60)
GCCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTAC > SRR4302533.390295/1‑94 (MQ=60)
CCGATCACTGTGGGGTTACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACT < SRR4302533.4855380/94‑1 (MQ=60)
CCGATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACT > SRR4302533.1527123/1‑94 (MQ=60)
ATCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTT > SRR4302533.44435/1‑94 (MQ=60)
TCACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTT > SRR4302533.3789287/1‑94 (MQ=60)
ACTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAA > SRR4302533.1477859/1‑94 (MQ=60)
CTGTCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAA > SRR4302533.3586464/1‑94 (MQ=60)
CTGCCGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAA < SRR4302533.3142120/94‑1 (MQ=60)
TGTGGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAG < SRR4302533.3692705/94‑1 (MQ=60)
CGGGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGC > SRR4302533.5289472/1‑94 (MQ=60)
GTTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGG < SRR4302533.896475/94‑1 (MQ=60)
GGTTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGG > SRR4302533.2084194/1‑94 (MQ=60)
TTACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGAT > SRR4302533.2018025/1‑94 (MQ=60)
TGCTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATC < SRR4302533.4069849/94‑1 (MQ=60)
TACTGATCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATC < SRR4302533.686072/94‑1 (MQ=60)
TACTGACCGGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATC < SRR4302533.5081195/94‑1 (MQ=60)
GATCGGCCCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGAT < SRR4302533.5158789/94‑1 (MQ=60)
GGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGATTCGT > SRR4302533.4100143/1‑94 (MQ=60)
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TGTTCATGATAATCACCCACCGTACCGCAAATCATTGCATCGGCTTCCCCACGCTGAACCATGATCGCGCCGATCACTGTCGGGTTACTGATCAGCGCCCGCTGCGCCTGTTCCTGAGTGACGCCGCGACGCTTCATGATCTGGAAGTATTCGGTCCAGTACTCTTTAAAGCGCGGATCGGATTCGT > NC_000913/2574710‑2574896
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
