Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,603,370 |
T→C |
Y180Y (TAT→TAC) |
hyfD → |
hydrogenase 4 membrane subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,603,370 | 0 | T | C | 98.7%
| 464.2
/ NA
| 152 | Y180Y (TAT→TAC) | hyfD | hydrogenase 4 membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (60/90); minor base A (2/0); total (62/90) |
| Fisher's exact test for biased strand distribution p-value = 1.65e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 202 total aligned reads displayed.
GGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTA > NC_000913/2603280‑2603459
|
gCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCtt > 1:4319415/1‑93 (MQ=255)
gTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTATCCTgc > 2:5352879/1‑93 (MQ=255)
gTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGGACCTTgc > 2:6037806/1‑93 (MQ=255)
ttGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTgcc > 2:3338299/1‑93 (MQ=255)
ttGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGGACCTTgtc > 2:2332758/1‑91 (MQ=255)
tGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTgccg > 2:1905374/1‑93 (MQ=255)
gATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTgccgc < 2:2548181/93‑1 (MQ=255)
gATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTgccgc > 1:117253/1‑93 (MQ=255)
gATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTgccgc > 2:6219244/1‑93 (MQ=255)
gATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTAACTTgccgg > 2:141753/1‑92 (MQ=255)
cAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTgccgccgc > 1:493668/1‑93 (MQ=255)
ttattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCAc < 1:2606999/93‑1 (MQ=255)
ttattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGGTCCTTGCCGCCGCCAc > 2:6061437/1‑93 (MQ=255)
ttattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCCTTGGGGGTGTACCTTTGCGCCGCCAc > 1:4589436/1‑93 (MQ=255)
attaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGc > 2:2450573/1‑93 (MQ=255)
ttaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCt < 2:5768839/93‑1 (MQ=255)
taCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTACCTTGCCGCCGCCACGCTg > 1:613998/1‑93 (MQ=255)
taCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTACCTTTCCCCCGCCACGcgg > 2:5989009/1‑91 (MQ=255)
aCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTACCTTGCCGCCGCCACGCTGt > 2:1025763/1‑93 (MQ=255)
aCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACCCTGt > 2:3578903/1‑93 (MQ=255)
ccAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTggt > 1:278031/1‑91 (MQ=255)
ccAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTACCTTGCCGCCGCCACGCTggt > 1:4513200/1‑91 (MQ=255)
cAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGttt > 2:3931884/1‑93 (MQ=255)
gagCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATGACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGttttt > 1:4444314/1‑93 (MQ=255)
gagCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGttttt < 1:190265/93‑1 (MQ=255)
agCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTg < 2:655718/93‑1 (MQ=255)
gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGc < 2:5028421/93‑1 (MQ=255)
gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGc < 1:5814120/93‑1 (MQ=255)
gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGc < 2:3784208/93‑1 (MQ=255)
aaaGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGGCGCCGCCCCGCCGTTTTTGCAGAcc > 2:51749/1‑93 (MQ=255)
aGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTACCTTGTCACCGCCAAGCTGGTTTTTCAGATCgg > 2:4963621/1‑93 (MQ=255)
gcgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGa < 1:2611633/93‑1 (MQ=255)
gcgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCCCGGCGTTTTTGCAGACCGGa > 1:6250985/1‑93 (MQ=255)
gcgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGa > 2:2820019/1‑93 (MQ=255)
gcgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGCGGGTGTAACTTGTCCCCCCCCCGCTGTTTTTGGCGACCgca > 1:555256/1‑91 (MQ=255)
gcgcAGCGTCCAGCACTAAAAGCGTTACTGATCACTCATATCGGCTCGTTGTGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGa < 2:281585/93‑1 (MQ=255)
cgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGaa < 2:6204459/93‑1 (MQ=255)
gcAGCGTTCAGCACTAAAAGCGTTACTTATCTCTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAAc < 1:3417723/93‑1 (MQ=255)
gcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCATTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGAc > 1:4087237/1‑93 (MQ=255)
gtttCAGCAATAAAAGTGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGttt < 1:2964260/91‑1 (MQ=255)
gTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTCCCCTGCCGCCGCCACGCTGTTTTTGCCGACCCGGACGTTTg > 1:5687478/1‑93 (MQ=255)
ttCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTgc < 1:4747853/93‑1 (MQ=255)
aGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCt < 2:941077/93‑1 (MQ=255)
gCACTAAAAGCGTTACTTATCACTCATATCGGCTCGATGGGGTTGTACCTTGCCGGCGCCACGCTGGTTTTGCAGAGCGGGACGTTTGAGCtt > 1:1847430/1‑93 (MQ=255)
cACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGGACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTa > 2:2909802/1‑93 (MQ=255)
aCTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTAACTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAg > 2:4124515/1‑93 (MQ=255)
aCTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTACCTTGCCGCCGCCACCCTGTTTTTGCAGACCGGAACGGTTGCGCGTAg > 1:1395356/1‑93 (MQ=255)
cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTAACTTGCCGCCGCCACGCTGTTTTTTCAGACCGGAACGTTTGCGCTTTgc > 2:4334296/1‑93 (MQ=255)
cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTTCCTCCCCCACGCTGGTTTTTCAGAGCGGAACGTTTGCGCTTAgc > 2:3029554/1‑93 (MQ=255)
cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAgc < 2:1482436/93‑1 (MQ=255)
tAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGGTTTTGCAGACCGGAACGTTTGCGCTTAgcg > 2:4019584/1‑93 (MQ=255)
aaaaGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAgcgc < 1:1259682/93‑1 (MQ=255)
aaaGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGcgcg > 2:3702625/1‑93 (MQ=255)
aaaGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTAGCCTTGCGCCGCCCCGCTGTTTTTGCACGGCCGAACGTATGTGCGTAGcgcg > 2:306261/1‑93 (MQ=255)
aaaGCGTTACTTATCACTCATATCGGCTCGCTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGcgcg > 1:1874246/1‑93 (MQ=255)
gCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATg < 1:3731405/93‑1 (MQ=255)
gCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATg > 2:5284191/1‑93 (MQ=255)
gTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAg > 1:770952/1‑93 (MQ=255)
ttACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGCGCGATGAGc > 1:992050/1‑93 (MQ=255)
ttACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGCGCGATGAGc > 1:6064387/1‑93 (MQ=255)
tACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGGTTTTTCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCg > 1:5320660/1‑93 (MQ=255)
aCTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGa < 2:3800748/93‑1 (MQ=255)
aCTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCCGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGa > 1:6011443/1‑93 (MQ=255)
cTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAg < 2:5637903/93‑1 (MQ=255)
tATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGtt < 1:1823718/93‑1 (MQ=255)
tATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGtt > 2:218964/1‑93 (MQ=255)
aTCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTa < 1:967037/93‑1 (MQ=255)
tcgcTCATATGGGCTCGTTGGGGTTGTACCTTGCCGCCGCCTCGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTac < 1:2749295/90‑1 (MQ=255)
tCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTac < 2:5489397/93‑1 (MQ=255)
aCTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACCTTTGTGCTTAGCGCGATGAGCGAGGTaacc > 2:4858906/1‑90 (MQ=255)
aCTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTacac < 2:5890050/93‑1 (MQ=255)
aCTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGGTTGCGCTTAGCGCGGTGAGGGAGGTacac > 2:1227137/1‑93 (MQ=255)
cTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACg < 1:2178950/93‑1 (MQ=255)
tCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGCACGTTTGCGCTTAGCGCGATGAGCGAGGTACACgg > 2:1583654/1‑93 (MQ=255)
atatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCg > 1:4988198/1‑93 (MQ=255)
tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGACAGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa > 1:1984562/1‑93 (MQ=255)
tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa < 2:2378907/93‑1 (MQ=255)
tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa < 1:2277244/93‑1 (MQ=255)
tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa > 1:2370904/1‑93 (MQ=255)
tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCCGAACGGTTGCGCTTAGCGCGATGAGCGAGGTACACGGCgc > 2:4523980/1‑92 (MQ=255)
tCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGGTACACGGCGACg > 1:4043581/1‑93 (MQ=255)
cGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGc < 2:216863/93‑1 (MQ=255)
gCTAGTTGGGGTTGTGCCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAc < 2:2653692/93‑1 (MQ=255)
cTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACg > 1:2601534/1‑93 (MQ=255)
tCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGt > 2:4469607/1‑93 (MQ=255)
tCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGt < 2:3235667/93‑1 (MQ=255)
gTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTa > 2:3013056/1‑93 (MQ=255)
gTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTa < 2:4796548/93‑1 (MQ=255)
ttGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTAt > 1:1482391/1‑93 (MQ=255)
tGGGTTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATc < 2:2683513/93‑1 (MQ=255)
gggtTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCt < 2:75736/93‑1 (MQ=255)
ggggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGCTATcc > 2:5658007/1‑92 (MQ=255)
gggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTg < 1:5030870/93‑1 (MQ=255)
gggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTg < 2:2754099/93‑1 (MQ=255)
gggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTg < 1:3894888/93‑1 (MQ=255)
gTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGt > 2:5825342/1‑93 (MQ=255)
tGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGttt < 2:1282531/93‑1 (MQ=255)
tGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGttt > 2:2249143/1‑93 (MQ=255)
gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa < 1:331516/93‑1 (MQ=255)
gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa > 1:5776458/1‑93 (MQ=255)
|
GGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTA > NC_000913/2603280‑2603459
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGC > NC_000913/2603277‑2603463
|
CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTAC > SRR4302533.2990731/1‑94 (MQ=60)
CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTAC > SRR4302533.2399810/1‑94 (MQ=60)
CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTAC > SRR4302533.1605892/1‑94 (MQ=60)
CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCCTTGGGGTTGTAC > SRR4302533.4370729/1‑94 (MQ=60)
TGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACC > SRR4302533.5506865/1‑94 (MQ=60)
GGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTT > SRR4302533.4345431/1‑94 (MQ=60)
GTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCC > SRR4302533.4472171/1‑94 (MQ=60)
TGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGC > SRR4302533.118000/1‑94 (MQ=60)
TCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGC > SRR4302533.496614/1‑94 (MQ=60)
TCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGC > SRR4302533.5073501/1‑94 (MQ=60)
CAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCC < SRR4302533.5005406/94‑1 (MQ=60)
GTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCCTTGGGGGTGTACCTTTGCGCCGCCAC > SRR4302533.4617234/1‑94 (MQ=60)
TTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACG < SRR4302533.2623011/94‑1 (MQ=60)
TTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGGTGTACCTTGCCGCCGCCACGCTG > SRR4302533.617606/1‑94 (MQ=60)
TACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGT < SRR4302533.3920968/94‑1 (MQ=60)
ACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGGT > SRR4302533.279727/1‑94 (MQ=60)
ACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTACCTTGCCGCCGCCACGCTGGT > SRR4302533.4540532/1‑94 (MQ=60)
CCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTT < SRR4302533.4158082/94‑1 (MQ=60)
CCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTT < SRR4302533.3400597/94‑1 (MQ=60)
AGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATGACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTT > SRR4302533.4471195/1‑94 (MQ=60)
GAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTG < SRR4302533.191458/94‑1 (MQ=60)
GAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGTTGTTCCTTGCCCCCGCCACGCTGTTTTTT > SRR4302533.475360/1‑94 (MQ=60)
AGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCCCGCTGTTTTTTC > SRR4302533.1215425/1‑94 (MQ=60)
GCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCA < SRR4302533.5849233/94‑1 (MQ=60)
GATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGA > SRR4302533.1324724/1‑94 (MQ=60)
AGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCCCGGCGTTTTTGCAGACCGGA > SRR4302533.6288380/1‑94 (MQ=60)
GCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAA < SRR4302533.2627662/94‑1 (MQ=60)
CGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTTTCGACCGGAAC > SRR4302533.5030697/1‑94 (MQ=60)
CGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAAC < SRR4302533.633966/94‑1 (MQ=60)
CGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCATTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGAC > SRR4302533.4112119/1‑94 (MQ=60)
GCAGCGTTCAGCACTAAAAGCGTTACTTATCTCTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACG < SRR4302533.3438842/94‑1 (MQ=60)
GCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATGTCGCCTCGTTGGGGTTGTACCTTGCCGCCGCCGCGCTGTTTTTGCAGACCGGAACG < SRR4302533.6031471/94‑1 (MQ=60)
AGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGCTGGGGTTGGACCTTGCCGCCGCCACcccggttttgtagagtgggacggt > SRR4302533.5449641/1‑70 (MQ=60)
gtTTCAGCAATAAAAGTGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTG < SRR4302533.2982380/92‑1 (MQ=60)
CGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTCCCCTGCCGCCGCCACGCTGTTTTTGCCGACCCGGACGTTTG > SRR4302533.5721830/1‑94 (MQ=60)
CGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTG < SRR4302533.2316028/94‑1 (MQ=60)
CGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTG < SRR4302533.2405557/94‑1 (MQ=60)
TTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCG < SRR4302533.4776635/94‑1 (MQ=60)
CAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCT < SRR4302533.3741176/94‑1 (MQ=60)
CAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCT > SRR4302533.2620893/1‑94 (MQ=60)
AGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTT < SRR4302533.6238403/94‑1 (MQ=60)
AGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGATGGGGTTGTACCTTGCCGGCGCCACGCTGGTTTTGCAGAGCGGGACGTTTGAGCTT > SRR4302533.1858694/1‑94 (MQ=60)
CACTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGGTGTACCTTGCCGCCGCCACCCTGTTTTTGCAGACCGGAACGGTTGCGCGTAG > SRR4302533.1403764/1‑94 (MQ=60)
CACTAAAAGCGTTACTTATCACTCATATCGGCTCCTTTGGGGTGTACCTTGCCGCCGCCTCGCTGCTTTTGCAGTCCGGAACGTTTTCGCTTTG > SRR4302533.6025835/1‑94 (MQ=60)
ACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGG > SRR4302533.2081110/1‑94 (MQ=60)
CTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTTTACCTTGCCGCCGCCACCCTGTTTTTGCCGAACGGAACGTTTTCGCTTTGCG > SRR4302533.3036683/1‑94 (MQ=60)
CTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCG < SRR4302533.2780988/94‑1 (MQ=60)
CTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCG < SRR4302533.776087/94‑1 (MQ=60)
AAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCTCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCG < SRR4302533.1835555/94‑1 (MQ=60)
AAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCG < SRR4302533.1267217/94‑1 (MQ=60)
AAAAGCGTTACTTATCACTCATATCGGCTCGCTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCG > SRR4302533.1885666/1‑94 (MQ=60)
AGCGTTACTTATCACTCATATCGGCTCGTTGTGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG < SRR4302533.3808511/94‑1 (MQ=60)
GCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGA < SRR4302533.3754293/94‑1 (MQ=60)
CGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAG > SRR4302533.775490/1‑94 (MQ=60)
GTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGCGCGATGAGC > SRR4302533.997849/1‑94 (MQ=60)
GTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGCGCGATGAGC > SRR4302533.6101096/1‑94 (MQ=60)
TTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGGTTTTTCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCG > SRR4302533.5352546/1‑94 (MQ=60)
TACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCCGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGA > SRR4302533.6047862/1‑94 (MQ=60)
ACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCCCCCCGCTGTTTTTGCAGAACGGAACGGTTGCGCTTAGAGCGGTGAGCGGG > SRR4302533.1508713/1‑94 (MQ=60)
CTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGT > SRR4302533.4448863/1‑94 (MQ=60)
TATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTA < SRR4302533.2716589/94‑1 (MQ=60)
TATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTA < SRR4302533.1834862/94‑1 (MQ=60)
TATCACTCATATCGGCTCGTTGGGGGTGTACCATGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTA > SRR4302533.2818426/1‑94 (MQ=60)
ATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTAC > SRR4302533.5545693/1‑94 (MQ=60)
ATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTAC < SRR4302533.972710/94‑1 (MQ=60)
TCGCTCATATGGGCTCGTTGGGGTTGTACCTTGCCGCCGCCTCGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACA < SRR4302533.2766150/94‑1 (MQ=60)
TCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGCACGTTTGCGCTTAGCGCGATGAGCGAGTTACA > SRR4302533.1609918/1‑94 (MQ=60)
CACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACAC < SRR4302533.6098132/94‑1 (MQ=60)
CACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACAC < SRR4302533.988436/94‑1 (MQ=60)
ACTCATATCGGCTCCTTGGGGTTGGACCTTGCCGCCGCCACGCTGTTTTTTCAGACCGGAACTATTGCCCTTATCACGATGAGCGAGTTTCACG > SRR4302533.2469260/1‑94 (MQ=42)
CTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGG < SRR4302533.2192383/94‑1 (MQ=60)
CATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCG > SRR4302533.5018443/1‑94 (MQ=60)
CATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCG < SRR4302533.2264670/94‑1 (MQ=60)
CATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCG < SRR4302533.2626804/94‑1 (MQ=60)
ATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGACAGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGA > SRR4302533.1996703/1‑94 (MQ=60)
ATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGA > SRR4302533.577616/1‑94 (MQ=60)
ATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGA > SRR4302533.2385569/1‑94 (MQ=60)
ATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGA > SRR4302533.1405869/1‑94 (MQ=60)
TATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGAC < SRR4302533.2291347/94‑1 (MQ=60)
ATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGGTACACGGCGACG > SRR4302533.4068194/1‑94 (MQ=60)
GGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAC > SRR4302533.1879686/1‑94 (MQ=60)
GGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAC < SRR4302533.3022416/94‑1 (MQ=60)
GGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAC < SRR4302533.1934565/94‑1 (MQ=60)
GGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAC > SRR4302533.1911710/1‑94 (MQ=60)
GGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAC > SRR4302533.5841704/1‑94 (MQ=60)
GCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACG > SRR4302533.2617517/1‑94 (MQ=60)
CTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGT > SRR4302533.4090049/1‑94 (MQ=60)
GTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTAT > SRR4302533.481657/1‑94 (MQ=60)
GTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTAT > SRR4302533.1491341/1‑94 (MQ=60)
GGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGG < SRR4302533.4580421/94‑1 (MQ=60)
GGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGG < SRR4302533.3918652/94‑1 (MQ=60)
GGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGG < SRR4302533.5061330/94‑1 (MQ=60)
GGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGT > SRR4302533.6122439/1‑94 (MQ=60)
GGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGT > SRR4302533.5629130/1‑94 (MQ=60)
TGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTA > SRR4302533.5811345/1‑94 (MQ=60)
GTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTAT < SRR4302533.333545/94‑1 (MQ=60)
TACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATG > SRR4302533.5400967/1‑94 (MQ=60)
TACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATG < SRR4302533.4656015/94‑1 (MQ=60)
ACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGG > SRR4302533.3004548/1‑94 (MQ=60)
CCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGC > SRR4302533.4385866/1‑94 (MQ=60)
CCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGC < SRR4302533.5119079/94‑1 (MQ=60)
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CTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGC > NC_000913/2603277‑2603463
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
