Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,613,076 |
T→C |
T276A (ACT→GCT) |
perM ← |
putative permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,613,076 | 0 | T | C | 100.0%
| 684.7
/ NA
| 208 | T276A (ACT→GCT) | perM | putative permease |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/110); total (98/110) |
Only 100 of 210 total aligned reads displayed.
TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGA > NC_000913/2612986‑2613165
|
tAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAc < 2:5390382/93‑1 (MQ=255)
tAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAc < 1:26203/93‑1 (MQ=255)
aaCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAcc > 2:5721699/1‑93 (MQ=255)
aaCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAcc > 2:5492759/1‑93 (MQ=255)
aCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCt > 1:1526655/1‑93 (MQ=255)
aCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCt < 2:4630825/93‑1 (MQ=255)
cGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgc < 2:2414223/93‑1 (MQ=255)
cGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgc > 1:3123005/1‑93 (MQ=255)
gCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcg < 2:4924364/93‑1 (MQ=255)
gCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcg > 2:1397168/1‑93 (MQ=255)
cTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcgc < 1:1278788/93‑1 (MQ=255)
ttCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGcc < 1:6037271/93‑1 (MQ=255)
ggAGAACAACACCGGCACTAACAGGTTGCCGTCCAACGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCaaa > 2:5322083/1‑93 (MQ=255)
ggAGAACAACACCCGCACTGCCAGGTTGCCGTCCAGCGCCTGCATAATCAGATACACCGCGAAGCAGCTCCAGCATTCAGCCCCTGCGCCaac > 2:2390464/1‑92 (MQ=255)
gagaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAc > 1:1120913/1‑93 (MQ=255)
gagaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAc > 2:2361466/1‑93 (MQ=255)
agaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACt > 1:4838171/1‑93 (MQ=255)
gaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTg > 2:6296460/1‑93 (MQ=255)
acaacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGa > 1:6124477/1‑93 (MQ=255)
aacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAAt < 2:1722101/93‑1 (MQ=255)
aacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAAt < 1:3986152/93‑1 (MQ=255)
cccGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAgc < 2:4153770/92‑1 (MQ=255)
ccGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAgag > 1:4614091/1‑91 (MQ=255)
gCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgcca > 1:3191775/1‑93 (MQ=255)
gCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgcca < 2:1770472/93‑1 (MQ=255)
cACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccac < 2:892413/93‑1 (MQ=255)
cACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccac > 2:1844990/1‑93 (MQ=255)
tAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccacgcc > 1:140520/1‑93 (MQ=255)
aCAGTTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCaa > 2:1683369/1‑93 (MQ=255)
cAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAac < 1:1061918/93‑1 (MQ=255)
ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca > 2:4492744/1‑93 (MQ=255)
ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca > 2:1070858/1‑93 (MQ=255)
ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca < 1:2668563/93‑1 (MQ=255)
ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca > 1:5177605/1‑93 (MQ=255)
gTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccac > 2:2957390/1‑93 (MQ=255)
gTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccac < 2:3164289/93‑1 (MQ=255)
ttGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccacc < 2:708198/93‑1 (MQ=255)
ttGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccacc < 1:5725542/93‑1 (MQ=255)
gCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCgg > 1:4973218/1‑93 (MQ=255)
ccGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGa < 1:5584834/93‑1 (MQ=255)
ccGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGa > 1:2444578/1‑93 (MQ=255)
cGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGaa > 2:2004684/1‑93 (MQ=255)
gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt > 1:2112299/1‑93 (MQ=255)
gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt > 1:166510/1‑93 (MQ=255)
gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt > 1:1812786/1‑93 (MQ=255)
tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg < 2:2583578/93‑1 (MQ=255)
tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg > 2:3130440/1‑93 (MQ=255)
tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg < 2:4789218/93‑1 (MQ=255)
cAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGt < 2:4873545/93‑1 (MQ=255)
cAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGt < 1:119081/93‑1 (MQ=255)
aGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTc < 1:2263229/93‑1 (MQ=255)
cgcCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTcac < 2:2046919/93‑1 (MQ=255)
gcCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAATCTGGAATAGCGCCACGCCAACCACCGGAATGGTcacc < 2:4286273/93‑1 (MQ=255)
tGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACcaca > 1:848285/1‑93 (MQ=255)
tGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACcaca > 1:349373/1‑93 (MQ=255)
aataatCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACaaa < 2:5143040/93‑1 (MQ=255)
aatCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgc < 2:5060911/93‑1 (MQ=255)
atCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcg > 2:1243677/1‑93 (MQ=255)
tCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcgc > 2:359627/1‑93 (MQ=255)
tCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcgc > 2:5996966/1‑93 (MQ=255)
gATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCaa > 1:2814255/1‑93 (MQ=255)
gATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCaa > 1:2221363/1‑93 (MQ=255)
aTACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAAt < 1:4449736/93‑1 (MQ=255)
acacCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCAGGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGt > 1:4174037/1‑93 (MQ=255)
acacCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGt < 1:5848202/93‑1 (MQ=255)
ccGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACg > 2:1948968/1‑93 (MQ=255)
gcgAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGa < 2:515430/93‑1 (MQ=255)
gcgAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGa > 2:3552445/1‑93 (MQ=255)
aaGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATa > 1:4229228/1‑93 (MQ=255)
agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACACATGCGCCAATGTACGGAATaa > 2:3914989/1‑93 (MQ=255)
agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATaa < 1:2017602/93‑1 (MQ=255)
agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATaa < 1:5343547/93‑1 (MQ=255)
gcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAg > 2:3214406/1‑93 (MQ=255)
gcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAg < 1:4482617/93‑1 (MQ=255)
cagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGa < 1:974498/93‑1 (MQ=255)
cagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGa < 2:2281275/93‑1 (MQ=255)
agcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGaa > 1:5121469/1‑93 (MQ=255)
agcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGaa > 1:3661766/1‑93 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCTCGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc < 2:2805452/93‑1 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc < 2:3157804/93‑1 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc > 2:5196656/1‑93 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc > 1:380618/1‑93 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc > 1:5302882/1‑93 (MQ=255)
gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc < 1:3348234/93‑1 (MQ=255)
cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc < 2:5572224/93‑1 (MQ=255)
cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc < 2:5410392/93‑1 (MQ=255)
cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc < 2:1472919/93‑1 (MQ=255)
cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc < 2:1625433/93‑1 (MQ=255)
cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc < 2:3395349/93‑1 (MQ=255)
ccAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCga > 1:5001386/1‑93 (MQ=255)
cAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgag > 1:1990681/1‑93 (MQ=255)
cAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgag < 2:5653078/93‑1 (MQ=255)
aGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgaga < 2:5890276/93‑1 (MQ=255)
gAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGaa < 1:4907811/93‑1 (MQ=255)
aaTTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAg > 1:3508012/1‑93 (MQ=255)
aaTTCAGCACCTGCGCCAAACTGGAATAGCCCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAg > 2:1729323/1‑93 (MQ=255)
ttCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGcc < 1:47728/93‑1 (MQ=255)
tCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCg < 1:5402504/93‑1 (MQ=255)
cAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGa < 2:1003310/93‑1 (MQ=255)
cAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGa < 2:407250/93‑1 (MQ=255)
|
TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGA > NC_000913/2612986‑2613165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGACCAG > NC_000913/2612983‑2613169
|
GGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGC < SRR4302533.4769403/94‑1 (MQ=60)
GGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGC < SRR4302533.1791651/94‑1 (MQ=60)
TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACC < SRR4302533.26376/94‑1 (MQ=60)
TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACC < SRR4302533.1838596/94‑1 (MQ=60)
AACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCT > SRR4302533.1567493/1‑94 (MQ=60)
AACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCT > SRR4302533.1535847/1‑94 (MQ=60)
CCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGC > SRR4302533.3142205/1‑94 (MQ=60)
GCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGC < SRR4302533.1192343/94‑1 (MQ=60)
CTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCC < SRR4302533.1286473/94‑1 (MQ=60)
TTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCA < SRR4302533.6073855/94‑1 (MQ=60)
GGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAC > SRR4302533.9926/1‑94 (MQ=60)
GGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAC > SRR4302533.1127563/1‑94 (MQ=60)
GAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGGATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACT > SRR4302533.4867494/1‑94 (MQ=60)
GAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACT > SRR4302533.4867495/1‑94 (MQ=60)
AACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGA > SRR4302533.6161394/1‑94 (MQ=60)
AACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGA > SRR4302533.121697/1‑94 (MQ=60)
ACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAA > SRR4302533.5005644/1‑94 (MQ=60)
ACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAA > SRR4302533.17281/1‑94 (MQ=60)
ACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAA < SRR4302533.5555148/94‑1 (MQ=60)
AACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATA < SRR4302533.4010429/94‑1 (MQ=60)
CACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGC > SRR4302533.236048/1‑94 (MQ=60)
CACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCAAAACTGGAATAGC < SRR4302533.2673963/94‑1 (MQ=60)
ACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCG < SRR4302533.4901977/94‑1 (MQ=60)
ACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGAG > SRR4302533.4642040/1‑94 (MQ=60)
ACCGGCACTAACAGGTTGCCGGCCAGCGCCTGAATAATCAGATACACCGCTAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCG < SRR4302533.4473619/94‑1 (MQ=60)
CGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCC < SRR4302533.5880494/94‑1 (MQ=60)
GGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCA > SRR4302533.3211410/1‑94 (MQ=60)
GCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCAC > SRR4302533.3976445/1‑94 (MQ=60)
CTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCC > SRR4302533.3914069/1‑94 (MQ=60)
CTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCC > SRR4302533.141416/1‑94 (MQ=60)
CAGGTTGCCGTCCAGCGCCTGAATAATCAGATACCCCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACC < SRR4302533.3524094/94‑1 (MQ=60)
CAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACC < SRR4302533.1068157/94‑1 (MQ=60)
AGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCA > SRR4302533.5208875/1‑94 (MQ=60)
AGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCA > SRR4302533.612675/1‑94 (MQ=60)
GGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCAC < SRR4302533.2684936/94‑1 (MQ=60)
TTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCG < SRR4302533.5760107/94‑1 (MQ=60)
TTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCG < SRR4302533.2156822/94‑1 (MQ=60)
TGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGG > SRR4302533.5003373/1‑94 (MQ=60)
GCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGA > SRR4302533.2459667/1‑94 (MQ=60)
CCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAA < SRR4302533.5618579/94‑1 (MQ=60)
CGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAT > SRR4302533.1088130/1‑94 (MQ=60)
CGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAT > SRR4302533.167566/1‑94 (MQ=60)
CGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAT > SRR4302533.1823857/1‑94 (MQ=60)
CGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAT > SRR4302533.2125328/1‑94 (MQ=60)
CCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGT < SRR4302533.5713890/94‑1 (MQ=60)
CAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTTAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTC > SRR4302533.5434425/1‑94 (MQ=60)
CAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTC < SRR4302533.119837/94‑1 (MQ=60)
AGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCA < SRR4302533.2277232/94‑1 (MQ=60)
GCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCA > SRR4302533.5160306/1‑94 (MQ=60)
CCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCAC < SRR4302533.3513515/94‑1 (MQ=60)
CCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCAC > SRR4302533.2696709/1‑94 (MQ=60)
CCTGAATAACCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCAC < SRR4302533.473969/94‑1 (MQ=60)
CTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACA > SRR4302533.853249/1‑94 (MQ=60)
CTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACA > SRR4302533.351505/1‑94 (MQ=60)
TGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAA > SRR4302533.3221273/1‑94 (MQ=60)
TGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAA > SRR4302533.593610/1‑94 (MQ=60)
GAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAA > SRR4302533.974277/1‑94 (MQ=60)
AATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAAT < SRR4302533.670240/94‑1 (MQ=60)
AATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAAT < SRR4302533.1470662/94‑1 (MQ=60)
ATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATG > SRR4302533.4179089/1‑94 (MQ=60)
TCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCC < SRR4302533.527023/94‑1 (MQ=60)
AGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAA > SRR4302533.2831577/1‑94 (MQ=60)
AGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAA > SRR4302533.2235082/1‑94 (MQ=60)
GATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAAT > SRR4302533.4508149/1‑94 (MQ=60)
ATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATG < SRR4302533.4476645/94‑1 (MQ=60)
TACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCAGGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGT > SRR4302533.4199331/1‑94 (MQ=60)
ACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTA < SRR4302533.5883553/94‑1 (MQ=60)
ACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAATGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTA > SRR4302533.4576868/1‑94 (MQ=60)
CCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGG < SRR4302533.4753623/94‑1 (MQ=60)
CGTAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAAT < SRR4302533.320780/94‑1 (MQ=60)
CGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAAT < SRR4302533.4986559/94‑1 (MQ=60)
CGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAAT > SRR4302533.4211385/1‑94 (MQ=60)
GAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATA > SRR4302533.4254796/1‑94 (MQ=60)
AAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAA < SRR4302533.353122/94‑1 (MQ=60)
AGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAG < SRR4302533.5375590/94‑1 (MQ=60)
AGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAG < SRR4302533.2030036/94‑1 (MQ=60)
AGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAG < SRR4302533.2030034/94‑1 (MQ=60)
GCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGA < SRR4302533.3687044/94‑1 (MQ=60)
GCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGA < SRR4302533.4509762/94‑1 (MQ=60)
CAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAA > SRR4302533.5152412/1‑94 (MQ=60)
CAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAA < SRR4302533.980218/94‑1 (MQ=60)
CAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAA > SRR4302533.3684280/1‑94 (MQ=60)
CAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAA < SRR4302533.2031577/94‑1 (MQ=60)
AGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAC > SRR4302533.5334651/1‑94 (MQ=60)
AGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAC > SRR4302533.382911/1‑94 (MQ=60)
AGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAC > SRR4302533.2039075/1‑94 (MQ=60)
GCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACC < SRR4302533.2550841/94‑1 (MQ=60)
GCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACC < SRR4302533.3368918/94‑1 (MQ=60)
CTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCG > SRR4302533.5343445/1‑94 (MQ=60)
CTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCG > SRR4302533.3488940/1‑94 (MQ=60)
CTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCG < SRR4302533.5117773/94‑1 (MQ=60)
TCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGA > SRR4302533.5031703/1‑94 (MQ=60)
CCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAG > SRR4302533.2002874/1‑94 (MQ=60)
AGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGCAATAAGAACCGAGAA < SRR4302533.5494067/94‑1 (MQ=60)
GAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAG > SRR4302533.3529644/1‑94 (MQ=60)
GAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAG < SRR4302533.4937548/94‑1 (MQ=60)
ATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCC > SRR4302533.1344930/1‑94 (MQ=60)
ATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCC < SRR4302533.3075810/94‑1 (MQ=60)
ATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCC > SRR4302533.2261097/1‑94 (MQ=60)
TTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCG < SRR4302533.48059/94‑1 (MQ=60)
TCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGA < SRR4302533.5434968/94‑1 (MQ=60)
CACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGACCAG > SRR4302533.6164353/1‑94 (MQ=60)
CACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGACCAG > SRR4302533.6308647/1‑94 (MQ=60)
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GGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGACCAG > NC_000913/2612983‑2613169
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
