Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,661,865 |
T→A |
L135Q (CTG→CAG) |
suhB → |
SuhB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,661,865 | 0 | T | A | 100.0%
| 912.5
/ NA
| 244 | L135Q (CTG→CAG) | suhB | SuhB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (129/115); total (129/115) |
Only 100 of 249 total aligned reads displayed.
TTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACG > NC_000913/2661775‑2661954
|
ttCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGa > 1:4329563/1‑93 (MQ=255)
ttCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGa > 2:875690/1‑93 (MQ=255)
tCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGaa < 2:2117636/93‑1 (MQ=255)
tCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGaa < 2:6068805/93‑1 (MQ=255)
tCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGaa > 1:5653574/1‑93 (MQ=255)
cGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAAc < 1:5943092/93‑1 (MQ=255)
cGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAAc < 1:3134724/93‑1 (MQ=255)
gTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACg < 2:3370076/93‑1 (MQ=255)
tATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACgg > 1:2403411/1‑93 (MQ=255)
tCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCt < 1:4969680/93‑1 (MQ=255)
cAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTa > 1:1087895/1‑93 (MQ=255)
aaaGGCCGCGCCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTTTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTAc < 2:3263512/93‑1 (MQ=255)
aaGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTAcc < 1:4919618/93‑1 (MQ=255)
aaGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTAcc > 1:708877/1‑93 (MQ=255)
aaGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTAcc > 1:1793276/1‑93 (MQ=255)
aGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCg > 2:1683705/1‑93 (MQ=255)
ccGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCAGCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACt < 1:4432997/93‑1 (MQ=255)
aCCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTgcgc > 1:2527843/1‑93 (MQ=255)
aCCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTgcgc < 1:184801/93‑1 (MQ=255)
aCCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTgcgc > 2:2596611/1‑93 (MQ=255)
ccGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGcgcg > 2:5502115/1‑93 (MQ=255)
cGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCgg < 2:3975130/93‑1 (MQ=255)
gTTGCTGTGTTATACGATCTTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGgcagc < 2:1750575/93‑1 (MQ=255)
ttGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGgcagca < 1:2491949/93‑1 (MQ=255)
ttGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGgcagca > 1:2780327/1‑93 (MQ=255)
gCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCAcc < 1:431480/93‑1 (MQ=255)
tgtgGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGc < 1:1007791/93‑1 (MQ=255)
gtgGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCt < 1:4051173/93‑1 (MQ=255)
gTATACGATCCTATGCGTAACGAACTGTTCCCCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTcgc < 2:1843347/93‑1 (MQ=255)
gTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTcgc < 2:1341945/93‑1 (MQ=255)
tataCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTcgcg < 1:5920951/93‑1 (MQ=255)
ataCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGa > 1:86933/1‑93 (MQ=255)
ataCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGa > 2:5712942/1‑93 (MQ=255)
taCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGAt < 2:3400158/93‑1 (MQ=255)
aCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGAtc > 2:231500/1‑93 (MQ=255)
aCGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGAtc > 1:4623276/1‑93 (MQ=255)
gATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGAtctc > 2:5462175/1‑93 (MQ=255)
aTCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCg < 1:468834/93‑1 (MQ=255)
aTCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCg > 1:6292807/1‑93 (MQ=255)
tCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGGCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCAGCGCTCGCGATCTCGa > 2:3179884/1‑93 (MQ=255)
tCCGATGCGTAACGACCTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGTGCGGCAGCACCGCTCGCGATCTCGa < 2:248948/93‑1 (MQ=255)
ccTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGAc < 1:642456/93‑1 (MQ=255)
ccTATGCGTAACGAACTGTTCACCGCCACTCGCGGGGAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCACCAACCCTCGAGATTTCGAc > 2:811394/1‑93 (MQ=255)
aTGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGt > 1:1074619/1‑93 (MQ=255)
gCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAc > 1:3055245/1‑93 (MQ=255)
gCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAc > 1:3450536/1‑93 (MQ=255)
gCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGGAc > 1:2777486/1‑93 (MQ=255)
gCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCGCGCGATCTCGACGGTAc < 1:237185/93‑1 (MQ=255)
gTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTa < 2:3947747/93‑1 (MQ=255)
gTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTa > 1:2045145/1‑93 (MQ=255)
tAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTAt > 1:5716397/1‑93 (MQ=255)
aCGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTc > 2:4528670/1‑93 (MQ=255)
gAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGCACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTg > 1:2644410/1‑93 (MQ=255)
gAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTg < 1:4559726/93‑1 (MQ=255)
gAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTg > 1:925410/1‑93 (MQ=255)
gAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTg > 1:6208972/1‑93 (MQ=255)
aaCTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTgg < 1:3350281/93‑1 (MQ=255)
aaCTGTTCACCGCCACTCGCGGTCAGGGCCCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTgg < 2:6191473/93‑1 (MQ=255)
aCTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTggg > 1:1295567/1‑92 (MQ=255)
aCTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGc > 1:959489/1‑93 (MQ=255)
aCTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGc < 2:2229223/93‑1 (MQ=255)
gTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAc < 1:4515324/93‑1 (MQ=255)
gTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAc < 2:515815/93‑1 (MQ=255)
gTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAc > 1:5533897/1‑93 (MQ=255)
ttCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAcc < 2:35756/93‑1 (MQ=255)
ttCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAcc < 2:2029421/93‑1 (MQ=255)
ttCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAcc > 1:1453276/1‑93 (MQ=255)
ttCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAcc < 2:2579299/93‑1 (MQ=255)
ttCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAcc < 2:4776801/93‑1 (MQ=255)
tCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCg > 1:3391075/1‑93 (MQ=255)
ccGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCt < 2:4214370/93‑1 (MQ=255)
cGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCtt > 2:2617199/1‑93 (MQ=255)
cGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCtt > 2:19020/1‑93 (MQ=255)
gCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTc > 2:4052806/1‑93 (MQ=255)
cccACTCGCGGGCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTc < 2:5209069/92‑1 (MQ=255)
ccACTCGCGGTCAGCGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTcc < 1:5295409/93‑1 (MQ=255)
aCTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCg > 1:4102520/1‑93 (MQ=255)
aCTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCg < 2:156155/93‑1 (MQ=255)
aCTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCg > 2:1191768/1‑93 (MQ=255)
tCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGtt > 2:4108150/1‑93 (MQ=255)
cgGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCTGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCaa > 2:3383147/1‑93 (MQ=255)
ggTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCaaa < 1:23082/93‑1 (MQ=255)
gTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAg > 2:593422/1‑93 (MQ=255)
cAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCa < 1:2008782/93‑1 (MQ=255)
aGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCaa > 2:1827698/1‑93 (MQ=255)
gcgcACAGCAGAACGGCGAACGACTGCGCGGCAGCGCCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAAc < 1:314862/93‑1 (MQ=255)
cgcACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACa < 1:6061856/93‑1 (MQ=255)
gcACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAg > 2:4750784/1‑93 (MQ=255)
gcACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAg > 2:376890/1‑93 (MQ=255)
gcACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAg < 1:3906721/93‑1 (MQ=255)
cacaGCAGACCGGCTGCCGGCTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGCCCGGCTTCCCGTTCAAAGCAAAACAGt < 2:2803821/93‑1 (MQ=255)
acaGCAGAACTGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 2:4266537/93‑1 (MQ=255)
acaGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 2:4593482/93‑1 (MQ=255)
acaGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 2:3720926/93‑1 (MQ=255)
acaGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 1:3541922/93‑1 (MQ=255)
acaGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 1:3886798/93‑1 (MQ=255)
acaGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTa < 1:4411423/93‑1 (MQ=255)
cagcagAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTAc < 1:86859/93‑1 (MQ=255)
aGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACg < 2:2867788/93‑1 (MQ=255)
aGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACg > 1:2180900/1‑93 (MQ=255)
|
TTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACG > NC_000913/2661775‑2661954
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACGCCA > NC_000913/2661772‑2661957
|
CTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCA > SRR4302533.122179/1‑94 (MQ=60)
CTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCA > SRR4302533.1295304/1‑94 (MQ=60)
GTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGA > SRR4302533.4355647/1‑94 (MQ=60)
TTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAA > SRR4302533.5687745/1‑94 (MQ=60)
TCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAAC < SRR4302533.3458021/94‑1 (MQ=60)
TCGTATCAAAGGCCGCACCGAAGTTGCTGTGATATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAAC < SRR4302533.2003353/94‑1 (MQ=60)
CGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACG < SRR4302533.4235618/94‑1 (MQ=60)
CGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACG < SRR4302533.5979033/94‑1 (MQ=60)
CGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACG < SRR4302533.3153998/94‑1 (MQ=60)
GTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGG > SRR4302533.2418254/1‑94 (MQ=60)
GTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGG > SRR4302533.4586913/1‑94 (MQ=60)
ATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCT > SRR4302533.4935096/1‑94 (MQ=60)
ATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCT > SRR4302533.3463573/1‑94 (MQ=60)
TCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTA > SRR4302533.1094303/1‑94 (MQ=60)
TCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTA < SRR4302533.4999810/94‑1 (MQ=60)
CAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTAC < SRR4302533.6344251/94‑1 (MQ=60)
AAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACC > SRR4302533.1804188/1‑94 (MQ=60)
AAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACC > SRR4302533.2615336/1‑94 (MQ=60)
AAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACC > SRR4302533.713064/1‑94 (MQ=60)
AAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCG > SRR4302533.6295588/1‑94 (MQ=60)
AAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCG < SRR4302533.4949421/94‑1 (MQ=60)
CCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCAGCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTG < SRR4302533.4459796/94‑1 (MQ=60)
CGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGC > SRR4302533.5713903/1‑94 (MQ=60)
CGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGC > SRR4302533.5672755/1‑94 (MQ=60)
CGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGC > SRR4302533.4347677/1‑94 (MQ=60)
GCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCG < SRR4302533.4998421/94‑1 (MQ=60)
CACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGC > SRR4302533.4084535/1‑94 (MQ=60)
CACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGC > SRR4302533.2543405/1‑94 (MQ=60)
CACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGC > SRR4302533.4930770/1‑94 (MQ=60)
CACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGC > SRR4302533.463071/1‑94 (MQ=60)
ACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCG < SRR4302533.185950/94‑1 (MQ=60)
CCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGG < SRR4302533.6191381/94‑1 (MQ=60)
CGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGC < SRR4302533.3543726/94‑1 (MQ=60)
CGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGC > SRR4302533.3305665/1‑94 (MQ=60)
AGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGC < SRR4302533.5099505/94‑1 (MQ=60)
AGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGC > SRR4302533.6076501/1‑94 (MQ=60)
GTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCA > SRR4302533.2797405/1‑94 (MQ=60)
GTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCA < SRR4302533.4495971/94‑1 (MQ=60)
TTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCAC < SRR4302533.3112007/94‑1 (MQ=60)
TTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCAC < SRR4302533.2340593/94‑1 (MQ=60)
TTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCAC < SRR4302533.2507297/94‑1 (MQ=60)
TGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACC > SRR4302533.392154/1‑94 (MQ=60)
GCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCG < SRR4302533.434052/94‑1 (MQ=60)
TGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCT < SRR4302533.1013686/94‑1 (MQ=60)
GTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTC < SRR4302533.4075849/94‑1 (MQ=60)
GTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTC < SRR4302533.2397657/94‑1 (MQ=60)
TGGTATACGATCCTATTCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCG > SRR4302533.2035779/1‑94 (MQ=60)
TGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGCACGGCTACCGACTGCGCGGCAGCACCGCTCG > SRR4302533.1802072/1‑94 (MQ=60)
TGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCG < SRR4302533.2069987/94‑1 (MQ=60)
GGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGC > SRR4302533.3383256/1‑94 (MQ=60)
GTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCG > SRR4302533.3812841/1‑94 (MQ=60)
GTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCG < SRR4302533.4429192/94‑1 (MQ=60)
TATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGA < SRR4302533.5956740/94‑1 (MQ=60)
TATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGA > SRR4302533.87492/1‑94 (MQ=60)
TATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGA > SRR4302533.906024/1‑94 (MQ=60)
TATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGAGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGA > SRR4302533.102749/1‑94 (MQ=60)
ATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGAT > SRR4302533.2324214/1‑94 (MQ=60)
TACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATC > SRR4302533.4651300/1‑94 (MQ=60)
TACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATC < SRR4302533.6311031/94‑1 (MQ=60)
ACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCT < SRR4302533.936069/94‑1 (MQ=60)
CGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTC > SRR4302533.4482047/1‑94 (MQ=60)
CGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTC < SRR4302533.4366794/94‑1 (MQ=60)
CGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTC < SRR4302533.2582777/94‑1 (MQ=60)
GATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCG < SRR4302533.2899319/94‑1 (MQ=60)
GATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCG < SRR4302533.771656/94‑1 (MQ=60)
GATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCG > SRR4302533.6330323/1‑94 (MQ=60)
ATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGA < SRR4302533.471632/94‑1 (MQ=60)
ATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGA > SRR4302533.4210621/1‑94 (MQ=60)
ATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGA > SRR4302533.2664655/1‑94 (MQ=60)
TCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGAC < SRR4302533.601281/94‑1 (MQ=60)
TCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGAC > SRR4302533.383174/1‑94 (MQ=60)
CCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACG < SRR4302533.646233/94‑1 (MQ=60)
CCTACGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACG < SRR4302533.1648426/94‑1 (MQ=60)
TATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGT > SRR4302533.1080954/1‑94 (MQ=60)
ATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTA > SRR4302533.5801828/1‑94 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAC < SRR4302533.109774/94‑1 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAC > SRR4302533.3471841/1‑94 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAC > SRR4302533.2794550/1‑94 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTAC > SRR4302533.3073973/1‑94 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGGAC > SRR4302533.2794549/1‑94 (MQ=60)
TGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGCAAACACCGCTCGCGATCTCGACGGTAC > SRR4302533.2794551/1‑94 (MQ=60)
GCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCGCGCGATCTCGACGGTACT < SRR4302533.238652/94‑1 (MQ=60)
CGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTA > SRR4302533.2057752/1‑94 (MQ=60)
GTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTAT < SRR4302533.128217/94‑1 (MQ=60)
GTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTAT > SRR4302533.5750921/1‑94 (MQ=60)
TAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATT < SRR4302533.3996736/94‑1 (MQ=60)
AACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTC < SRR4302533.4628903/94‑1 (MQ=60)
ACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCT < SRR4302533.87438/94‑1 (MQ=60)
CGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGCACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTG > SRR4302533.2660658/1‑94 (MQ=60)
CGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTG > SRR4302533.6246212/1‑94 (MQ=60)
CGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTG > SRR4302533.930843/1‑94 (MQ=60)
GAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGG < SRR4302533.4587381/94‑1 (MQ=60)
GAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGG > SRR4302533.1093260/1‑94 (MQ=60)
AACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGG > SRR4302533.1303365/1‑94 (MQ=60)
AACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGC < SRR4302533.911128/94‑1 (MQ=60)
AACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGC > SRR4302533.965131/1‑94 (MQ=60)
AACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGC < SRR4302533.3370978/94‑1 (MQ=60)
AACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGC > SRR4302533.4444992/1‑94 (MQ=60)
ACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTtgct > SRR4302533.2508437/1‑90 (MQ=60)
ACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCG > SRR4302533.1927950/1‑94 (MQ=60)
TGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAC > SRR4302533.651782/1‑94 (MQ=60)
TGTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGAC > SRR4302533.5567307/1‑94 (MQ=60)
GTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACC < SRR4302533.4542665/94‑1 (MQ=60)
GTTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACC > SRR4302533.1462041/1‑94 (MQ=60)
TTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCG > SRR4302533.3412017/1‑94 (MQ=60)
TTCACCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCG < SRR4302533.5668479/94‑1 (MQ=60)
CCGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTT < SRR4302533.2178854/94‑1 (MQ=60)
CGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTC > SRR4302533.406368/1‑94 (MQ=60)
CGCCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTC < SRR4302533.5016140/94‑1 (MQ=60)
CCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCC > SRR4302533.534432/1‑94 (MQ=60)
CCACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTACC > SRR4302533.18358/1‑94 (MQ=60)
CCACTCGCGGTCAGCGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCC < SRR4302533.5327124/94‑1 (MQ=60)
CACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACTGGCTTCCCG < SRR4302533.4658408/94‑1 (MQ=60)
CACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCG > SRR4302533.4127482/1‑94 (MQ=60)
CACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCG > SRR4302533.2423484/1‑94 (MQ=60)
ACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCTACGGTACTATTCTGGCGACCGGCTTCCCGT > SRR4302533.24208/1‑94 (MQ=60)
ACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGT < SRR4302533.1388403/94‑1 (MQ=60)
ACTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGT < SRR4302533.3167972/94‑1 (MQ=60)
CTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTT > SRR4302533.336559/1‑94 (MQ=60)
CTCGCGGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTT > SRR4302533.2262840/1‑94 (MQ=60)
GGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAG > SRR4302533.4931203/1‑94 (MQ=60)
GGTCAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAG < SRR4302533.23236/94‑1 (MQ=60)
CAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAA > SRR4302533.688228/1‑94 (MQ=60)
CAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAA > SRR4302533.3117592/1‑94 (MQ=60)
CAGGGCGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAA < SRR4302533.2021154/94‑1 (MQ=60)
GCGCACAGCAGAACGGCGAACGACTGCGCGGCAGCGCCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACA < SRR4302533.316784/94‑1 (MQ=60)
CGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAG < SRR4302533.5971517/94‑1 (MQ=60)
CGCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAG < SRR4302533.6098552/94‑1 (MQ=60)
GCACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGT < SRR4302533.3930584/94‑1 (MQ=60)
ACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTAC < SRR4302533.3563748/94‑1 (MQ=60)
ACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTAC < SRR4302533.3910508/94‑1 (MQ=60)
ACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTAC < SRR4302533.5809724/94‑1 (MQ=60)
ACAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTAC < SRR4302533.4438065/94‑1 (MQ=60)
CAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACG < SRR4302533.87418/94‑1 (MQ=60)
CAGCAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACG > SRR4302533.2194347/1‑94 (MQ=60)
CAGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACGCCA < SRR4302533.4357213/94‑1 (MQ=60)
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CTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACGCCA > NC_000913/2661772‑2661957
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
