Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,675,068 |
T→C |
E438E (GAA→GAG) |
yphE ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,675,068 | 0 | T | C | 100.0%
| 667.9
/ NA
| 206 | E438E (GAA→GAG) | yphE | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/101); total (105/101) |
Only 100 of 207 total aligned reads displayed.
CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT > NC_000913/2674978‑2675157
|
gCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGa < 2:4350385/93‑1 (MQ=255)
cAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGat > 2:513906/1‑93 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata < 1:602186/93‑1 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata < 2:2990974/93‑1 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata < 2:2534041/93‑1 (MQ=255)
ctcctcCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATc < 1:5223669/93‑1 (MQ=255)
ctcctcCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATc < 2:3114178/93‑1 (MQ=255)
tcctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGTTATCg > 2:6031632/1‑93 (MQ=255)
tcctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCg > 1:1186310/1‑93 (MQ=255)
tccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcg > 2:2276495/1‑93 (MQ=255)
ccACTTCACTGGAGATAAACACCTCGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgc < 2:2170340/93‑1 (MQ=255)
ccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgc < 1:746497/93‑1 (MQ=255)
ccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgc < 2:6021211/93‑1 (MQ=255)
cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc > 1:5678229/1‑93 (MQ=255)
cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc < 2:3321321/93‑1 (MQ=255)
cTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccgc > 1:2702386/1‑93 (MQ=255)
cTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccgc < 1:121695/93‑1 (MQ=255)
tgcACGGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcg < 1:1487540/91‑1 (MQ=255)
aCTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGt < 1:6149557/93‑1 (MQ=255)
aCTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGt < 2:4812962/93‑1 (MQ=255)
cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGtt < 2:1659250/93‑1 (MQ=255)
cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCCCGATATCGACGCCGCGCGtt < 1:4008795/93‑1 (MQ=255)
tGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTg > 2:1360853/1‑93 (MQ=255)
tGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTg < 1:2382785/93‑1 (MQ=255)
ggAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTgg < 2:2204127/93‑1 (MQ=255)
aTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcg < 1:414060/93‑1 (MQ=255)
aaaccaccccGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt < 2:5088500/89‑1 (MQ=255)
acacCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGa > 2:1059619/1‑93 (MQ=255)
acacCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGa < 1:610872/93‑1 (MQ=255)
caccacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAg < 2:2335649/93‑1 (MQ=255)
ccacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGca < 2:3389834/93‑1 (MQ=255)
ccacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGca < 2:3724440/93‑1 (MQ=255)
cGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaaca > 2:2862761/1‑93 (MQ=255)
gCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaacaa > 2:641639/1‑93 (MQ=255)
cTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACaaa > 2:860344/1‑93 (MQ=255)
tttttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACaaaa > 1:3051507/1‑93 (MQ=255)
tttttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACaaaa > 2:6223621/1‑93 (MQ=255)
tttttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACaaaa < 1:4599874/93‑1 (MQ=255)
tttttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACaaaa > 1:1142869/1‑93 (MQ=255)
ttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATct < 1:2054154/93‑1 (MQ=255)
tCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctg < 2:922491/93‑1 (MQ=255)
tCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctg < 2:744412/93‑1 (MQ=255)
tCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctg < 1:2514331/93‑1 (MQ=255)
ccTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctgg > 2:3633592/1‑93 (MQ=255)
ccTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctgg > 1:1903763/1‑93 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct > 2:4456895/1‑93 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct < 2:4559011/93‑1 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct > 2:1571302/1‑93 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct > 2:6171511/1‑93 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctcgct > 2:1152830/1‑93 (MQ=255)
ggCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCtggctggc < 1:3347284/93‑1 (MQ=255)
ccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAt < 1:5871790/93‑1 (MQ=255)
ccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAt < 1:3294273/93‑1 (MQ=255)
cagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa < 1:5461195/93‑1 (MQ=255)
cagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa > 1:1966268/1‑93 (MQ=255)
agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg < 1:223524/93‑1 (MQ=255)
agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg > 1:5484285/1‑93 (MQ=255)
gcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGa > 2:1344075/1‑93 (MQ=255)
gcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGa > 1:4854239/1‑93 (MQ=255)
gcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGa < 1:1405767/93‑1 (MQ=255)
cTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGAc < 1:1868079/93‑1 (MQ=255)
tCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGGAGCATAGAcc > 1:2563819/1‑93 (MQ=255)
tCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATatagc > 2:5713529/1‑89 (MQ=255)
tCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGAcc > 1:1156165/1‑93 (MQ=255)
cACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGAccc > 1:666240/1‑93 (MQ=255)
aCGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCa > 1:1541608/1‑93 (MQ=255)
ggACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAc > 1:3187795/1‑93 (MQ=255)
gACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACg < 1:3931641/93‑1 (MQ=255)
aCAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGa < 1:1258781/93‑1 (MQ=255)
aCAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGa < 1:6268945/93‑1 (MQ=255)
cAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAc < 2:4963689/93‑1 (MQ=255)
cAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAc < 1:2241549/93‑1 (MQ=255)
aaTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAcc < 1:5574468/93‑1 (MQ=255)
aTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCg < 2:5388968/93‑1 (MQ=255)
aCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAt < 1:1008694/93‑1 (MQ=255)
ggTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATca < 1:3851691/93‑1 (MQ=255)
ggTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATca < 2:4633767/93‑1 (MQ=255)
ggTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATca > 2:5818167/1‑93 (MQ=255)
gTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcac > 2:2379888/1‑93 (MQ=255)
tAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacc > 1:2085250/1‑93 (MQ=255)
tAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacc > 1:1089557/1‑93 (MQ=255)
aaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcaccac > 2:3499240/1‑93 (MQ=255)
aaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcaccac < 1:1662444/93‑1 (MQ=255)
aaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcaccac < 1:864923/93‑1 (MQ=255)
aTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACt > 2:3955768/1‑93 (MQ=255)
tCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGGATAGACCCAACGACCGATCACCACtt > 2:2063309/1‑93 (MQ=255)
tCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtt > 1:3754809/1‑93 (MQ=255)
tCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtt < 1:594855/93‑1 (MQ=255)
tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtttt > 1:6065485/1‑93 (MQ=255)
gctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGTCCGATCACCACttttt < 1:3620060/93‑1 (MQ=255)
gctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACttttt < 2:6064109/93‑1 (MQ=255)
ctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTg > 2:1388339/1‑93 (MQ=255)
tgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGc > 1:218947/1‑93 (MQ=255)
gTTTGGCCTCGATAACGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGCCCCAACGACCGATCACCACTTTTTGCt < 2:6041107/93‑1 (MQ=255)
ttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGa < 1:1707845/93‑1 (MQ=255)
ttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGa < 2:1196633/93‑1 (MQ=255)
tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt < 1:2534855/93‑1 (MQ=255)
tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt < 2:783479/93‑1 (MQ=255)
ggCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAtt < 1:381616/93‑1 (MQ=255)
ggCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAtt < 2:1691345/93‑1 (MQ=255)
|
CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT > NC_000913/2674978‑2675157
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCC > NC_000913/2674975‑2675160
|
CAGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCC > SRR4302533.1392507/1‑94 (MQ=60)
CAGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCC > SRR4302533.1874380/1‑94 (MQ=60)
CAGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCC > SRR4302533.2921710/1‑94 (MQ=60)
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT > SRR4302533.1670977/1‑94 (MQ=60)
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT < SRR4302533.5424391/94‑1 (MQ=60)
GGCAACTCCTCCACTTCACTGGAGATAAACCCCTCGCTTTGCCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGA < SRR4302533.11437/94‑1 (MQ=60)
GGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGA > SRR4302533.6232060/1‑94 (MQ=60)
CAACTCCTCCACTTCACTGGAGATAACCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATA < SRR4302533.159270/94‑1 (MQ=60)
CAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATC > SRR4302533.2126894/1‑94 (MQ=60)
CAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATA < SRR4302533.3545391/94‑1 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT < SRR4302533.605726/94‑1 (MQ=60)
ACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATC > SRR4302533.1701589/1‑94 (MQ=60)
ACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATC > SRR4302533.2397129/1‑94 (MQ=60)
ACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATATGCTGTTTGGCCTCGATATC > SRR4302533.5505835/1‑94 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG > SRR4302533.1193431/1‑94 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG < SRR4302533.5255095/94‑1 (MQ=60)
TCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGA < SRR4302533.5128434/94‑1 (MQ=60)
CCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAC > SRR4302533.6077715/1‑94 (MQ=60)
CCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAC < SRR4302533.5832882/94‑1 (MQ=60)
CCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAC > SRR4302533.1918826/1‑94 (MQ=60)
CTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACG > SRR4302533.5384519/1‑94 (MQ=60)
CCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCC < SRR4302533.750890/94‑1 (MQ=60)
CCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCC > SRR4302533.5712523/1‑94 (MQ=60)
ACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGC > SRR4302533.2718963/1‑94 (MQ=60)
CTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCG < SRR4302533.122462/94‑1 (MQ=60)
TGCACGGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC < SRR4302533.1496513/94‑1 (MQ=60)
TCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCG > SRR4302533.3797599/1‑94 (MQ=60)
ACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTT < SRR4302533.6186574/94‑1 (MQ=60)
CTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCCCGATATCGACGCCGCGCGTTG < SRR4302533.4033203/94‑1 (MQ=60)
TGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGG < SRR4302533.2397518/94‑1 (MQ=60)
GAGATAACCTCCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT < SRR4302533.3199616/94‑1 (MQ=60)
GAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT > SRR4302533.3280665/1‑94 (MQ=60)
AGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTC > SRR4302533.6119244/1‑94 (MQ=60)
GATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCG < SRR4302533.101562/94‑1 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT > SRR4302533.2003555/1‑94 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT < SRR4302533.416545/94‑1 (MQ=60)
AACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGA > SRR4302533.4205199/1‑94 (MQ=60)
ACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAG < SRR4302533.614463/94‑1 (MQ=60)
CTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAA > SRR4302533.3070191/1‑94 (MQ=60)
CTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAA > SRR4302533.1149682/1‑94 (MQ=60)
TTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAAT < SRR4302533.4627741/94‑1 (MQ=60)
TTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAAT > SRR4302533.2091877/1‑94 (MQ=60)
TTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTG < SRR4302533.2066827/94‑1 (MQ=60)
TCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGG < SRR4302533.2529823/94‑1 (MQ=60)
TCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGG > SRR4302533.1915381/1‑94 (MQ=60)
CTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCT > SRR4302533.4720040/1‑94 (MQ=60)
GGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCA < SRR4302533.3367965/94‑1 (MQ=60)
GCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAG < SRR4302533.1164708/94‑1 (MQ=60)
AGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCA > SRR4302533.2454100/1‑94 (MQ=60)
CCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATA < SRR4302533.3314605/94‑1 (MQ=60)
CCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATA > SRR4302533.1317798/1‑94 (MQ=60)
CCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATA < SRR4302533.5907284/94‑1 (MQ=60)
CCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATA > SRR4302533.1978283/1‑94 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG > SRR4302533.1258600/1‑94 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG > SRR4302533.5517338/1‑94 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG < SRR4302533.3003376/94‑1 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG < SRR4302533.5494097/94‑1 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG > SRR4302533.116142/1‑94 (MQ=60)
AGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGA < SRR4302533.5550736/94‑1 (MQ=60)
AGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGA > SRR4302533.6045440/1‑94 (MQ=60)
AGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGA < SRR4302533.224919/94‑1 (MQ=60)
AGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGA > SRR4302533.4883658/1‑94 (MQ=60)
GCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGAC < SRR4302533.1414270/94‑1 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGGAGCATAGACC > SRR4302533.2579599/1‑94 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC < SRR4302533.1879468/94‑1 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC > SRR4302533.1163099/1‑94 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC > SRR4302533.3875303/1‑94 (MQ=60)
TCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCC > SRR4302533.876812/1‑94 (MQ=60)
TCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCC > SRR4302533.670176/1‑94 (MQ=60)
TCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCC > SRR4302533.2212593/1‑94 (MQ=60)
TCACGAACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCC < SRR4302533.1903535/94‑1 (MQ=60)
CACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCA > SRR4302533.1550896/1‑94 (MQ=60)
CACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCA < SRR4302533.3575973/94‑1 (MQ=60)
ACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAA > SRR4302533.1996967/1‑94 (MQ=60)
CGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAC > SRR4302533.3207406/1‑94 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302533.6172316/94‑1 (MQ=60)
GACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGA < SRR4302533.3955644/94‑1 (MQ=60)
ACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAC < SRR4302533.1266309/94‑1 (MQ=60)
ACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAC < SRR4302533.6306403/94‑1 (MQ=60)
ACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAC > SRR4302533.5809411/1‑94 (MQ=60)
CAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACC < SRR4302533.2255405/94‑1 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG < SRR4302533.5608156/94‑1 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG > SRR4302533.5623679/1‑94 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG < SRR4302533.3680179/94‑1 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG > SRR4302533.6322348/1‑94 (MQ=60)
TACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAT < SRR4302533.1494421/94‑1 (MQ=60)
TACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAT > SRR4302533.2561682/1‑94 (MQ=60)
ACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATC < SRR4302533.1014597/94‑1 (MQ=60)
CGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCA < SRR4302533.736681/94‑1 (MQ=60)
GGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCAC > SRR4302533.1512718/1‑94 (MQ=60)
GGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCAC < SRR4302533.3875212/94‑1 (MQ=60)
GTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACC > SRR4302533.1095988/1‑94 (MQ=60)
GTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACC > SRR4302533.2098088/1‑94 (MQ=60)
TAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCA > SRR4302533.2632569/1‑94 (MQ=60)
AAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCAC > SRR4302533.3965706/1‑94 (MQ=60)
AAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCAC > SRR4302533.5919528/1‑94 (MQ=60)
AAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCAC < SRR4302533.254115/94‑1 (MQ=60)
AATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACT < SRR4302533.869988/94‑1 (MQ=60)
AATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACT < SRR4302533.1672493/94‑1 (MQ=60)
ATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTT < SRR4302533.3331845/94‑1 (MQ=60)
ATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTT > SRR4302533.3777823/1‑94 (MQ=60)
ATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTT > SRR4302533.3864686/1‑94 (MQ=60)
TCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCCCTTT > SRR4302533.1843523/1‑94 (MQ=60)
TCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTT < SRR4302533.598361/94‑1 (MQ=60)
CTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTT > SRR4302533.6102195/1‑94 (MQ=60)
GCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGTCCGATCACCACTTTTTG < SRR4302533.3642334/94‑1 (MQ=60)
GCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTG < SRR4302533.2252791/94‑1 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAATAAAATCTGGCTGGCAGCATAGGCCCAACGACCGATCACCACTTTTTGT > SRR4302533.1199238/1‑94 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC > SRR4302533.220317/1‑94 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC < SRR4302533.772308/94‑1 (MQ=60)
TGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCT < SRR4302533.4163686/94‑1 (MQ=60)
TTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAT < SRR4302533.1718194/94‑1 (MQ=60)
TGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT < SRR4302533.2550460/94‑1 (MQ=60)
GGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTG < SRR4302533.383918/94‑1 (MQ=60)
GCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGC < SRR4302533.223675/94‑1 (MQ=60)
GCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGC > SRR4302533.5201400/1‑94 (MQ=60)
GCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGC < SRR4302533.5739169/94‑1 (MQ=60)
GCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGC > SRR4302533.5430681/1‑94 (MQ=60)
CCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCC < SRR4302533.4349710/94‑1 (MQ=60)
|
CAGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCC > NC_000913/2674975‑2675160
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
