Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,675,068 |
T→C |
E438E (GAA→GAG) |
yphE ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,675,068 | 0 | T | C | 99.6%
| 803.6
/ ‑5.9
| 250 | E438E (GAA→GAG) | yphE | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (107/142); total (108/142) |
| Fisher's exact test for biased strand distribution p-value = 4.32e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 261 total aligned reads displayed.
CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT > NC_000913/2674978‑2675157
|
cGGCAACCCCTCCACTACACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTc < 2:2722837/93‑1 (MQ=255)
ggCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCg < 1:1073947/93‑1 (MQ=255)
cAACTCCTCCGCTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGat < 2:1482886/93‑1 (MQ=255)
cAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGat > 2:8898105/1‑93 (MQ=255)
caCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata < 2:3966947/92‑1 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACACTACGGTAAATCTTCTGTTTGGCTTCGaca > 1:3589721/1‑91 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata < 1:5515710/93‑1 (MQ=255)
aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata > 1:1669406/1‑93 (MQ=255)
aCTCCTCCTCTTCACTAGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat < 2:701446/93‑1 (MQ=255)
aCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat > 1:3357899/1‑93 (MQ=255)
aCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat > 2:9147060/1‑93 (MQ=255)
ctcctcCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATc < 1:8529928/93‑1 (MQ=255)
tcctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCg > 1:4238320/1‑93 (MQ=255)
cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa > 2:7988010/1‑93 (MQ=255)
cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa < 2:5629052/93‑1 (MQ=255)
cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa < 1:160632/93‑1 (MQ=255)
tccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcg > 2:8112205/1‑93 (MQ=255)
tccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcg < 2:8376351/93‑1 (MQ=255)
cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc < 2:7574395/93‑1 (MQ=255)
cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc < 1:8098056/93‑1 (MQ=255)
ccTTCACTGGAGATAACCACCTCGTTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccg < 1:1870129/92‑1 (MQ=255)
cTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccgc > 2:9641330/1‑93 (MQ=255)
ttCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcg < 1:4043851/93‑1 (MQ=255)
ttCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcg < 2:8328393/93‑1 (MQ=255)
tCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcgc > 1:3932016/1‑93 (MQ=255)
cACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcgcg < 2:8841371/93‑1 (MQ=255)
agtGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGt < 2:479473/91‑1 (MQ=255)
cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGtt < 2:4644669/93‑1 (MQ=255)
cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGtt < 1:7611999/93‑1 (MQ=255)
tGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTg > 2:3567175/1‑93 (MQ=255)
gaaaaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc < 2:8246892/90‑1 (MQ=255)
gaTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc < 1:2135405/93‑1 (MQ=255)
gaTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc < 1:7691670/93‑1 (MQ=255)
aTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcg < 1:539726/93‑1 (MQ=255)
tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt > 1:6101325/1‑93 (MQ=255)
tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt > 1:8384994/1‑93 (MQ=255)
tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgc > 1:1473126/1‑92 (MQ=255)
tAAACACCACGCTTTTTCCTTCGGCACCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGACGCCCGTTGCCtcgt > 1:26637/1‑93 (MQ=255)
aaaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt < 2:2145922/92‑1 (MQ=255)
aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc < 1:3995865/93‑1 (MQ=255)
aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc > 1:2988276/1‑93 (MQ=255)
aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc > 1:5617580/1‑93 (MQ=255)
aaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtcg > 2:2980718/1‑93 (MQ=255)
aaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCCCGCGTTGGCtcgtcg > 1:3520735/1‑93 (MQ=255)
accacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGc < 2:6560266/93‑1 (MQ=255)
accacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGc > 2:190170/1‑93 (MQ=255)
ccacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGca > 2:2412567/1‑93 (MQ=255)
cacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaa > 2:5847780/1‑93 (MQ=255)
gCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaacaa > 1:1827205/1‑93 (MQ=255)
gCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaacaa < 2:4862910/93‑1 (MQ=255)
cTTTTTCCTTCGGCAGCAAGCTCACGGACAATACGGTAAATCTGCTGTTTGGACTCGATATCGACGCCGCGCGTTGGCTCGTAGAGCAACaaa > 2:6020662/1‑93 (MQ=255)
tttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc < 1:5859620/93‑1 (MQ=255)
tttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc < 2:8306716/93‑1 (MQ=255)
tttCCTTCGGAAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc < 2:1423049/93‑1 (MQ=255)
tCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctg < 1:3814669/93‑1 (MQ=255)
cTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggc < 2:516402/93‑1 (MQ=255)
ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct > 1:7330346/1‑93 (MQ=255)
tCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggctg > 2:3869925/1‑93 (MQ=255)
tCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggctg < 1:6515408/93‑1 (MQ=255)
gCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgca < 2:3008104/93‑1 (MQ=255)
cagccagcACACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcag < 1:8864651/93‑1 (MQ=255)
agccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagc < 2:338499/93‑1 (MQ=255)
gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca > 2:4667039/1‑93 (MQ=255)
gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca < 1:6342201/93‑1 (MQ=255)
gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca > 2:3144184/1‑93 (MQ=255)
cagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa > 1:4338305/1‑93 (MQ=255)
cagcGCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa < 2:1726141/93‑1 (MQ=255)
cagcGCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa < 1:7888215/93‑1 (MQ=255)
agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg > 1:4542671/1‑93 (MQ=255)
agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg > 2:7097625/1‑93 (MQ=255)
aCGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCa > 1:7164903/1‑93 (MQ=255)
cGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCaa < 2:8506988/93‑1 (MQ=255)
cGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCaa < 2:5404045/93‑1 (MQ=255)
ggACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAc < 2:244104/93‑1 (MQ=255)
ggACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAc < 1:494933/93‑1 (MQ=255)
gACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACg > 2:4548444/1‑93 (MQ=255)
gACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACg > 1:5215156/1‑93 (MQ=255)
cAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAc > 1:7082175/1‑93 (MQ=255)
aTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCg < 2:4219117/93‑1 (MQ=255)
aTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCg > 1:1012894/1‑93 (MQ=255)
aCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAt < 2:3456197/93‑1 (MQ=255)
aCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAt > 2:8421646/1‑93 (MQ=255)
cGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATc < 2:9542868/93‑1 (MQ=255)
cGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATc > 2:636405/1‑93 (MQ=255)
gTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcac > 1:4772932/1‑93 (MQ=255)
tAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacc < 1:9211481/93‑1 (MQ=255)
aaaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacca < 2:1203113/93‑1 (MQ=255)
aaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcaccac > 1:7961134/1‑93 (MQ=255)
aTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACt < 1:2285168/93‑1 (MQ=255)
aTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACt < 1:6384037/93‑1 (MQ=255)
tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCGCtttt < 2:1385521/93‑1 (MQ=255)
tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtttt < 2:9532694/93‑1 (MQ=255)
tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtttt < 1:241255/93‑1 (MQ=255)
tgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGc > 1:1152988/1‑93 (MQ=255)
gTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCt < 1:8729556/93‑1 (MQ=255)
tttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCCTCGACCCAACGACCGCTCACCACTTTTTGCTg > 1:6483282/1‑93 (MQ=255)
ttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGa < 1:1275730/93‑1 (MQ=255)
tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt < 1:2045036/93‑1 (MQ=255)
tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt < 1:692294/93‑1 (MQ=255)
ggCCTCGCTATCGCCGCCGCGCGTTGGCTCGTCGCGCCCCCACCTCTGGCTGGCCGCCTCGCCCCCACGCCCGTTCGCCCCTTTTTGCTGCtt < 2:7704245/93‑1 (MQ=255)
|
CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT > NC_000913/2674978‑2675157
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCCA > NC_000913/2674976‑2675161
|
cgtGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT < SRR4302540.4909974/91‑1 (MQ=60)
CGCGGCAACTCCTCCCCTTCGCTGGAGATACACCCCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT < SRR4302540.7785538/94‑1 (MQ=60)
CGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT < SRR4302540.3052411/94‑1 (MQ=60)
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT > SRR4302540.3010820/1‑94 (MQ=60)
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT < SRR4302540.335585/94‑1 (MQ=60)
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCT > SRR4302540.1351543/1‑94 (MQ=60)
GCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTC < SRR4302540.6965429/94‑1 (MQ=60)
GGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGA < SRR4302540.1084912/94‑1 (MQ=60)
GGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGA > SRR4302540.4256885/1‑94 (MQ=60)
GCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGAT < SRR4302540.3616668/94‑1 (MQ=60)
GCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGAT > SRR4302540.5246826/1‑94 (MQ=60)
CAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACACTACGGTAAATCTTCTGTTTGGCTTCGACA > SRR4302540.3628934/1‑94 (MQ=60)
CAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATA > SRR4302540.1687571/1‑94 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT > SRR4302540.6095011/1‑94 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT > SRR4302540.3394679/1‑94 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT < SRR4302540.5576463/94‑1 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT < SRR4302540.8111063/94‑1 (MQ=60)
AACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATAT < SRR4302540.1132009/94‑1 (MQ=60)
ccccccccCTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG < SRR4302540.8279124/86‑1 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG < SRR4302540.5644926/94‑1 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG < SRR4302540.5484046/94‑1 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG > SRR4302540.4284438/1‑94 (MQ=60)
CTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCG < SRR4302540.8629039/94‑1 (MQ=60)
cccccccCTTCACTGGAGATACACACCACGCTTTTTCCTGCGGCCTCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGA < SRR4302540.8068191/87‑1 (MQ=60)
TCCTCCCCTTCACTGGAGATAAACACTACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGA < SRR4302540.8068190/94‑1 (MQ=60)
TCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGA > SRR4302540.4426253/1‑94 (MQ=60)
CCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAC < SRR4302540.9698524/94‑1 (MQ=60)
CCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAC < SRR4302540.162251/94‑1 (MQ=60)
CTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACG > SRR4302540.8226783/1‑94 (MQ=60)
TCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGC > SRR4302540.5279505/1‑94 (MQ=60)
TCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGC > SRR4302540.7028088/1‑94 (MQ=60)
CCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCC > SRR4302540.2266286/1‑94 (MQ=60)
CCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCC < SRR4302540.2588465/94‑1 (MQ=60)
CACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCG < SRR4302540.8192050/94‑1 (MQ=60)
CCTTCACTGGAGATAACCACCTCGTTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGC < SRR4302540.1890623/94‑1 (MQ=60)
CTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCG > SRR4302540.5380219/1‑94 (MQ=60)
CTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCG < SRR4302540.7025009/94‑1 (MQ=60)
CTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCC > SRR4302540.5380222/1‑94 (MQ=60)
TTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC < SRR4302540.4087447/94‑1 (MQ=60)
TTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC < SRR4302540.7339629/94‑1 (MQ=60)
TTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC > SRR4302540.9177074/1‑94 (MQ=60)
TTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC > SRR4302540.3974525/1‑94 (MQ=60)
TTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGC < SRR4302540.4087448/94‑1 (MQ=60)
ACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTT > SRR4302540.1584519/1‑94 (MQ=60)
ACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTT > SRR4302540.8700757/1‑94 (MQ=60)
CTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTG < SRR4302540.7697552/94‑1 (MQ=60)
CTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTG < SRR4302540.7697551/94‑1 (MQ=60)
GGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGC < SRR4302540.3657228/94‑1 (MQ=60)
GGAGATAAACACCACGATTTTTCCTGCGGCAGCCAGCTCACGGACAATCCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGC < SRR4302540.3881985/94‑1 (MQ=60)
GAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT < SRR4302540.8667802/94‑1 (MQ=60)
GAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT < SRR4302540.1298348/94‑1 (MQ=60)
GAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT < SRR4302540.1298349/94‑1 (MQ=60)
GAGATAAACACCACCCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCT < SRR4302540.3275286/94‑1 (MQ=60)
AGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTC < SRR4302540.745557/94‑1 (MQ=60)
GATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCG < SRR4302540.7779151/94‑1 (MQ=60)
GATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCG < SRR4302540.2158331/94‑1 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT > SRR4302540.8482276/1‑94 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT < SRR4302540.545571/94‑1 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT > SRR4302540.6169258/1‑94 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGT > SRR4302540.6169562/1‑94 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGC > SRR4302540.1489230/1‑94 (MQ=60)
ATAAACACCACGCTTTTTCCTTCGGCACCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGACGCCCGTTGCCTCGT > SRR4302540.26924/1‑94 (MQ=60)
TAACCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTC < SRR4302540.8901316/94‑1 (MQ=60)
TAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTC > SRR4302540.5679394/1‑94 (MQ=60)
TAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTC > SRR4302540.3021231/1‑94 (MQ=60)
AAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCG < SRR4302540.4038870/94‑1 (MQ=60)
AAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCG < SRR4302540.7782507/94‑1 (MQ=60)
AAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCCCGCGTTGGCTCGTCG > SRR4302540.3559101/1‑94 (MQ=60)
AAACACCACGCTTTTGCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCG < SRR4302540.723600/94‑1 (MQ=60)
ccccCGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCA < SRR4302540.3064200/90‑1 (MQ=60)
CCACGCTTTTTCCTTCGGCAGCCAGCTCACGGCCAATACGGTAAATCTTCTGTTTGGCCTCGCTCTCGAGCCCGCGCGTTGGCTCctccagaaa > SRR4302540.799257/1‑85 (MQ=60)
CCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAA > SRR4302540.728553/1‑94 (MQ=60)
ACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACA > SRR4302540.6529657/1‑94 (MQ=60)
CGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGCGCAACGA > SRR4302540.2155962/1‑94 (MQ=60)
CGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAA > SRR4302540.1847189/1‑94 (MQ=60)
TTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAAT > SRR4302540.1990212/1‑94 (MQ=60)
TTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCT < SRR4302540.5924419/94‑1 (MQ=60)
TTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCT < SRR4302540.4222873/94‑1 (MQ=60)
TTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTG > SRR4302540.7695125/1‑94 (MQ=60)
TCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGG < SRR4302540.3856206/94‑1 (MQ=60)
CTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCT > SRR4302540.7412184/1‑94 (MQ=60)
CTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCT < SRR4302540.6122042/94‑1 (MQ=60)
CTTCGGCAGCCAGCTCACGGACAATACGGTAAAGCTGCTGGTTGGCTTCGATAGCGTCGCCGTGCGTGGGCTCGTCGAGCAACAAAATCTGGCT < SRR4302540.1486996/94‑1 (MQ=60)
TTCGGCAGCCAGCTCACGGACAATACGGTAAATCGGCTGTTTGCCCTCGATATCGACCCCGCGCGTTGCTTCGTCGGGCAACAAAATCTGGCTG > SRR4302540.8046200/1‑94 (MQ=60)
TCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGG < SRR4302540.6587792/94‑1 (MQ=60)
TCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGG < SRR4302540.6587790/94‑1 (MQ=60)
CGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGC > SRR4302540.637434/1‑94 (MQ=60)
GGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCGACAAAATCTGGCTGGCA > SRR4302540.1510573/1‑94 (MQ=60)
GGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCA > SRR4302540.400416/1‑94 (MQ=60)
CAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGC > SRR4302540.4292226/1‑94 (MQ=60)
CAGCCAGCACACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGC < SRR4302540.8967228/94‑1 (MQ=60)
GCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAT > SRR4302540.6501774/1‑94 (MQ=60)
GCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAT > SRR4302540.9019851/1‑94 (MQ=60)
GCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAT < SRR4302540.6412825/94‑1 (MQ=60)
GCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCAT < SRR4302540.6412826/94‑1 (MQ=60)
CCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATA > SRR4302540.4385534/1‑94 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG > SRR4302540.4591830/1‑94 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG < SRR4302540.2987721/94‑1 (MQ=60)
CAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTCGCTCGCCGAGCCGCAAAATCTGGCTGGCAGCATAG > SRR4302540.3505188/1‑94 (MQ=60)
CAGCGCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAG < SRR4302540.7980290/94‑1 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC > SRR4302540.1765929/1‑94 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC < SRR4302540.1873509/94‑1 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC < SRR4302540.4823152/94‑1 (MQ=60)
CTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACC < SRR4302540.2325899/94‑1 (MQ=60)
CCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCC < SRR4302540.1111508/94‑1 (MQ=60)
CACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCA > SRR4302540.7244779/1‑94 (MQ=60)
CGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAC < SRR4302540.5742230/94‑1 (MQ=60)
CGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAC < SRR4302540.681412/94‑1 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302540.3605988/94‑1 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG > SRR4302540.5271995/1‑94 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302540.500242/94‑1 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302540.500241/94‑1 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG > SRR4302540.7981695/1‑94 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302540.4339765/94‑1 (MQ=60)
GGACAATACGGTAAATCTGCTGTTTGGCCTAGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACG < SRR4302540.4821578/94‑1 (MQ=60)
ACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAC > SRR4302540.7160996/1‑94 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG > SRR4302540.1023160/1‑94 (MQ=60)
AATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCG > SRR4302540.1023159/1‑94 (MQ=60)
ATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGA > SRR4302540.391415/1‑94 (MQ=60)
ACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATC < SRR4302540.2762241/94‑1 (MQ=60)
GGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCAC > SRR4302540.4823922/1‑94 (MQ=60)
TAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCA < SRR4302540.9322008/94‑1 (MQ=60)
AAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCAC < SRR4302540.1217298/94‑1 (MQ=60)
AAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCAC > SRR4302540.8053914/1‑94 (MQ=60)
ATCTGCTGTTTGGGCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGAAGCATAGACCCAACGACCGATCACCACTT > SRR4302540.2067043/1‑94 (MQ=60)
ATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTT < SRR4302540.6455104/94‑1 (MQ=60)
ATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTT < SRR4302540.2309738/94‑1 (MQ=60)
CTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTT > SRR4302540.992796/1‑94 (MQ=60)
CTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTT > SRR4302540.2373645/1‑94 (MQ=60)
TGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTT < SRR4302540.243588/94‑1 (MQ=60)
tcttTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTG < SRR4302540.8413009/90‑1 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC > SRR4302540.399799/1‑94 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC > SRR4302540.2154487/1‑94 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC > SRR4302540.85542/1‑94 (MQ=60)
CTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGC > SRR4302540.1164992/1‑94 (MQ=60)
TGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGAACCAACGACCGATCACCACTTTTTGCT > SRR4302540.4993240/1‑94 (MQ=60)
GTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCCTCGACCCAACGACCGCTCACCACTTTTTGCTG > SRR4302540.6555393/1‑94 (MQ=60)
GTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTG > SRR4302540.6555394/1‑94 (MQ=60)
GTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTG < SRR4302540.8830928/94‑1 (MQ=60)
TTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGA < SRR4302540.1738463/94‑1 (MQ=60)
TTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGA < SRR4302540.1685176/94‑1 (MQ=60)
TTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAT < SRR4302540.1288881/94‑1 (MQ=60)
TTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAT < SRR4302540.7833651/94‑1 (MQ=60)
TGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT < SRR4302540.699718/94‑1 (MQ=60)
TGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT < SRR4302540.5633026/94‑1 (MQ=60)
TGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT < SRR4302540.2067066/94‑1 (MQ=60)
GGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTG > SRR4302540.3634819/1‑94 (MQ=60)
CTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCCA < SRR4302540.9537093/94‑1 (MQ=60)
CTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCCA < SRR4302540.8177133/94‑1 (MQ=60)
|
AGCGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATTGCCA > NC_000913/2674976‑2675161
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
