Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,729,373 |
+C |
intergenic (‑195/+247) |
rrsG ← / ← clpB |
16S ribosomal RNA/ClpB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,729,371 | 1 | . | C | 99.2%
| 405.7
/ ‑3.6
| 131 | intergenic (‑193/+249) | rrsG/clpB | 16S ribosomal RNA/ClpB |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (64/66); total (65/66) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 |
Only 100 of 133 total aligned reads displayed.
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTT > NC_000913/2729309‑2729458
|
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt > 2:2580319/1‑93 (MQ=9)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt < 1:3491938/93‑1 (MQ=12)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt < 1:4473181/93‑1 (MQ=12)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt < 1:1456466/93‑1 (MQ=9)
ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt > 2:1787237/1‑93 (MQ=12)
ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt < 2:4367297/93‑1 (MQ=16)
gTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtc < 2:1940325/93‑1 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc > 2:3617821/1‑93 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc < 2:5770373/93‑1 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc > 1:1290286/1‑93 (MQ=255)
aaGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg < 2:3723924/93‑1 (MQ=255)
agagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGt > 2:4284737/1‑93 (MQ=255)
gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt < 2:2137626/93‑1 (MQ=255)
gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt > 1:5096206/1‑93 (MQ=255)
gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt > 2:4164340/1‑93 (MQ=255)
gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGGGGGCATAATACGCCT‑TCC‑CGCTACAGAGCCAAGCATTTCTTTGCTTTTCTCTGtt > 2:5090069/1‑93 (MQ=14)
gagCAGTGACGCTTCGCTTTTTCTCAGCGGCGCGGGGGGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt > 2:5179527/1‑93 (MQ=14)
agCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTg < 2:4698338/93‑1 (MQ=255)
agCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTg < 1:3663471/93‑1 (MQ=255)
agCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTg < 2:3048413/93‑1 (MQ=255)
agCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTg < 1:3268243/93‑1 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 1:6248397/1‑93 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 1:2845166/1‑93 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 2:6303884/93‑1 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 2:5667541/1‑93 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 1:1710613/1‑93 (MQ=255)
cAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag < 2:2898044/93‑1 (MQ=255)
cAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag < 1:6307164/93‑1 (MQ=255)
cAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑CACGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag > 1:2749372/1‑93 (MQ=255)
aGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga < 1:1093410/93‑1 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt < 2:2522447/93‑1 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt < 1:3706435/93‑1 (MQ=255)
tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt < 2:2481788/93‑1 (MQ=255)
tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt < 1:3961571/93‑1 (MQ=255)
tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt < 1:2015731/93‑1 (MQ=255)
tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt > 1:5681273/1‑93 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc > 1:3544068/1‑93 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc > 1:5452936/1‑93 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc > 1:5452935/1‑93 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc < 1:752432/93‑1 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc < 1:1831359/93‑1 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc > 1:4279153/1‑93 (MQ=255)
ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct > 2:380974/1‑93 (MQ=255)
cgcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtctc > 1:1677259/1‑93 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa < 1:3657297/93‑1 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa < 2:24678/93‑1 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg > 1:3357623/1‑93 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:4000411/93‑1 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg > 2:2322347/1‑93 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:4856356/93‑1 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg > 1:5651444/1‑93 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg < 2:654729/93‑1 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg > 2:2585364/1‑93 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg < 1:6002512/93‑1 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg < 2:6038826/93‑1 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATAAGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg > 2:790503/1‑93 (MQ=255)
tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga < 2:721489/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 2:4536545/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga > 2:2941430/1‑93 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 1:2337072/93‑1 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa > 1:5828663/1‑93 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 1:2387625/93‑1 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCCTAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 2:4467914/1‑93 (MQ=255)
ttttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcc > 2:4139584/1‑93 (MQ=255)
tttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CTCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAccc < 1:6045409/93‑1 (MQ=255)
ttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc < 1:4429003/93‑1 (MQ=255)
tcggcggcgCGGGGTGTGCATAATACGCCTCC‑C‑CGCTACAGAGTCAAGCTTTTCTTTGTTTTTCTCTTTTGAGATTCTCGGGAGACCCccgcc < 2:1207865/90‑1 (MQ=18)
tcAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgcc > 1:3853617/1‑93 (MQ=255)
gcgcGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcg < 1:6286566/93‑1 (MQ=255)
gcgcGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcg < 1:4399841/93‑1 (MQ=255)
ggcgGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg < 2:3500555/92‑1 (MQ=255)
cgcgGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg > 1:5044586/1‑93 (MQ=255)
gcgGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggc < 2:3669010/93‑1 (MQ=255)
ggggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg > 2:6104552/1‑93 (MQ=255)
gggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCggcggc > 2:2943954/1‑93 (MQ=255)
ggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGgcggcg < 2:948369/93‑1 (MQ=255)
ggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGgcggcg > 2:5461936/1‑93 (MQ=255)
gtgtGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt < 2:3329151/93‑1 (MQ=255)
tgtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg > 1:5327450/1‑93 (MQ=255)
tgtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg > 1:2247904/1‑93 (MQ=255)
tgtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg < 1:2312536/93‑1 (MQ=255)
tgtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg > 1:352557/1‑93 (MQ=255)
gtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtgt < 1:2388956/93‑1 (MQ=255)
tgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt > 1:445144/1‑93 (MQ=255)
gCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGttt > 2:4679507/1‑93 (MQ=255)
cATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg > 2:4684681/1‑93 (MQ=255)
cATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg > 1:924208/1‑93 (MQ=255)
cATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGCTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg < 1:4431478/93‑1 (MQ=255)
ataataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGc < 1:428709/93‑1 (MQ=255)
ataataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGc < 1:2969643/93‑1 (MQ=255)
ataataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGc > 1:6031155/1‑93 (MQ=255)
taataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc < 1:5434375/93‑1 (MQ=255)
taataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc > 1:760676/1‑93 (MQ=255)
taataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc > 1:4492900/1‑93 (MQ=255)
taataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc > 2:1893035/1‑93 (MQ=255)
ataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgt < 1:102357/93‑1 (MQ=255)
ataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgt > 2:895682/1‑93 (MQ=255)
taCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgtt > 1:3195016/1‑93 (MQ=255)
taCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgtt > 2:5023536/1‑93 (MQ=255)
gCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttgtt > 2:6011565/1‑93 (MQ=255)
|
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTT > NC_000913/2729309‑2729458
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > NC_000913/2729280‑2729466
|
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑C‑C < SRR4302533.1741483/94‑1 (MQ=0)
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑C‑C > SRR4302533.4683838/1‑94 (MQ=0)
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑C‑C < SRR4302533.3452123/94‑1 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTT < SRR4302533.3513472/94‑1 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTT < SRR4302533.1465247/94‑1 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTT < SRR4302533.4500236/94‑1 (MQ=0)
TTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTC > SRR4302533.1298055/1‑94 (MQ=7)
TTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTC < SRR4302533.6227296/94‑1 (MQ=7)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT > SRR4302533.1465836/1‑94 (MQ=10)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT < SRR4302533.5636641/94‑1 (MQ=10)
AGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTT > SRR4302533.5126999/1‑94 (MQ=22)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA < SRR4302533.3685992/94‑1 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA > SRR4302533.2862675/1‑94 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA > SRR4302533.6285785/1‑94 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA > SRR4302533.1720980/1‑94 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA < SRR4302533.3288410/94‑1 (MQ=27)
GCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑CACGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAG > SRR4302533.2766228/1‑94 (MQ=42)
CAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGA < SRR4302533.6344968/94‑1 (MQ=32)
AGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAT > SRR4302533.3452060/1‑94 (MQ=34)
AGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAT < SRR4302533.1099879/94‑1 (MQ=34)
GTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATT < SRR4302533.3729201/94‑1 (MQ=37)
GTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATT > SRR4302533.5715589/1‑94 (MQ=37)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC < SRR4302533.3985708/94‑1 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC > SRR4302533.4304886/1‑94 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC > SRR4302533.5485781/1‑94 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC > SRR4302533.5485780/1‑94 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC > SRR4302533.3565908/1‑94 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC < SRR4302533.3029727/94‑1 (MQ=39)
TGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTC < SRR4302533.2028149/94‑1 (MQ=39)
GCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCT < SRR4302533.756866/94‑1 (MQ=42)
GCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCT < SRR4302533.1842537/94‑1 (MQ=42)
CCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTC > SRR4302533.1687414/1‑94 (MQ=44)
CCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTC > SRR4302533.3588319/1‑94 (MQ=44)
GCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAG < SRR4302533.3679782/94‑1 (MQ=49)
GCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAG > SRR4302533.3378371/1‑94 (MQ=49)
CTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302533.5034282/94‑1 (MQ=51)
CTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302533.4885787/94‑1 (MQ=51)
CTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG > SRR4302533.5685602/1‑94 (MQ=51)
CTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302533.4024769/94‑1 (MQ=51)
TTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGA < SRR4302533.6038879/94‑1 (MQ=54)
GCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAA > SRR4302533.5863881/1‑94 (MQ=60)
GCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAA > SRR4302533.2722780/1‑94 (MQ=60)
CTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC < SRR4302533.2351538/94‑1 (MQ=60)
CTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC < SRR4302533.2402375/94‑1 (MQ=60)
TTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CTCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCC < SRR4302533.6082031/94‑1 (MQ=60)
TTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCC > SRR4302533.4446253/1‑94 (MQ=60)
TTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCG < SRR4302533.4455778/94‑1 (MQ=60)
TTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCG < SRR4302533.233343/94‑1 (MQ=60)
CTCAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCC > SRR4302533.3877156/1‑94 (MQ=60)
CAGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGA > SRR4302533.5372898/1‑94 (MQ=60)
AGCGGCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAC > SRR4302533.4254133/1‑94 (MQ=60)
GCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGG < SRR4302533.4426406/94‑1 (MQ=60)
GCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGG > SRR4302533.5075109/1‑94 (MQ=60)
GCGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGG < SRR4302533.6324073/94‑1 (MQ=60)
CGCGGGGTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGC < SRR4302533.3802764/94‑1 (MQ=60)
GTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTG > SRR4302533.5359375/1‑94 (MQ=60)
GTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTG > SRR4302533.354707/1‑94 (MQ=60)
GTGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTG > SRR4302533.2261797/1‑94 (MQ=60)
TGTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGT < SRR4302533.2326862/94‑1 (MQ=60)
GTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTT < SRR4302533.2403712/94‑1 (MQ=60)
GTGCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTT > SRR4302533.447808/1‑94 (MQ=60)
GCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTG > SRR4302533.929636/1‑94 (MQ=60)
GCATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTG < SRR4302533.1953241/94‑1 (MQ=60)
CATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGC > SRR4302533.4494617/1‑94 (MQ=60)
CATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGC > SRR4302533.6067705/1‑94 (MQ=60)
CATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGCTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGC < SRR4302533.4458268/94‑1 (MQ=60)
ATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC > SRR4302533.765152/1‑94 (MQ=60)
ATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC > SRR4302533.4520111/1‑94 (MQ=60)
ATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC < SRR4302533.431265/94‑1 (MQ=60)
ATAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC < SRR4302533.2987799/94‑1 (MQ=60)
TAATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCG < SRR4302533.5467101/94‑1 (MQ=60)
AATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGT > SRR4302533.698449/1‑94 (MQ=60)
AATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGT < SRR4302533.5890252/94‑1 (MQ=60)
ATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTT < SRR4302533.102995/94‑1 (MQ=60)
ATACGCCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTT > SRR4302533.3214674/1‑94 (MQ=60)
CCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC < SRR4302533.6246867/94‑1 (MQ=60)
CCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC > SRR4302533.263322/1‑94 (MQ=60)
CCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC > SRR4302533.453935/1‑94 (MQ=60)
CCTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC < SRR4302533.728603/94‑1 (MQ=60)
CTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302533.4186879/1‑94 (MQ=60)
CTTCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302533.4766059/1‑94 (MQ=60)
TC‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTG < SRR4302533.886599/94‑1 (MQ=60)
C‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT > SRR4302533.3744127/1‑94 (MQ=60)
C‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT > SRR4302533.5952051/1‑94 (MQ=60)
C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTC < SRR4302533.566392/94‑1 (MQ=60)
C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTC < SRR4302533.1702903/94‑1 (MQ=60)
CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > SRR4302533.6089428/1‑94 (MQ=60)
CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > SRR4302533.513384/1‑94 (MQ=60)
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TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > NC_000913/2729280‑2729466
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
