Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,777,297 |
T→C |
T1194A (ACG→GCG) |
ypjA ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,777,297 | 0 | T | C | 100.0%
| 749.8
/ NA
| 235 | T1194A (ACG→GCG) | ypjA | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (135/100); total (135/100) |
Only 100 of 245 total aligned reads displayed.
CATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA > NC_000913/2777207‑2777386
|
atTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCaaa < 2:1041785/93‑1 (MQ=255)
atTGGTCAGCTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCaaa < 2:5050901/93‑1 (MQ=255)
ttGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAc < 2:2691439/93‑1 (MQ=255)
ttGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAc < 1:3971613/93‑1 (MQ=255)
ggTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGa > 2:5213429/1‑93 (MQ=255)
tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg > 1:6252753/1‑93 (MQ=255)
tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg < 2:4138193/93‑1 (MQ=255)
tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg > 2:42333/1‑93 (MQ=255)
aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa > 2:2576301/1‑93 (MQ=255)
aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa > 2:607841/1‑93 (MQ=255)
aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa < 1:674007/93‑1 (MQ=255)
ttCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcc > 1:2147579/1‑93 (MQ=255)
ttCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcc > 2:2277987/1‑93 (MQ=255)
tCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtccc > 1:2603467/1‑93 (MQ=255)
tCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtccc > 1:1320880/1‑93 (MQ=255)
ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc > 1:5352537/1‑93 (MQ=255)
ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc > 2:1299666/1‑93 (MQ=255)
ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc > 2:775275/1‑93 (MQ=255)
ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc > 2:3234868/1‑93 (MQ=255)
cAGTTCCTGTTGCCGTCAATTTTCAGGACATACTAATAGGTCCCAAAATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccct < 1:1195220/93‑1 (MQ=255)
gTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctcc > 1:5786088/1‑93 (MQ=255)
gTTGCTGTTGCCGTCACTTTGCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctcc < 2:536706/93‑1 (MQ=255)
ttGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctccc > 2:5937836/1‑93 (MQ=255)
gCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTccccc > 1:780591/1‑93 (MQ=255)
tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCACCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTg < 1:706932/93‑1 (MQ=255)
tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCCACCGAATCATCCCCTCCCCCTg > 2:2768893/1‑93 (MQ=255)
tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTg > 2:2387148/1‑93 (MQ=255)
gTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGt > 2:5989550/1‑93 (MQ=255)
ttGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCTCTCCCCCTgct > 1:5850373/1‑91 (MQ=255)
ttGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGtt < 2:4840133/93‑1 (MQ=255)
gCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACNNAGCATCCCCTCCCCNTGtntt > 1:2888564/1‑93 (MQ=255)
gCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGtttt < 1:4809330/93‑1 (MQ=255)
ccGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTc > 1:402244/1‑93 (MQ=255)
ccGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTc > 2:4870160/1‑93 (MQ=255)
cGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCa > 1:3096558/1‑93 (MQ=255)
gTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCAc > 1:3202032/1‑93 (MQ=255)
tCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCAcc > 2:4441885/1‑93 (MQ=255)
aCTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAg < 2:3128776/93‑1 (MQ=255)
cTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGc > 2:3199324/1‑93 (MQ=255)
ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg > 2:1433125/1‑93 (MQ=255)
ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg > 1:5616988/1‑93 (MQ=255)
ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg < 1:3864261/93‑1 (MQ=255)
ttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTc < 2:2016557/93‑1 (MQ=255)
ggACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcg > 2:6267260/1‑93 (MQ=255)
gACATACTCATAGGTCCCAAGATCAACGAATCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcgc < 2:1884216/93‑1 (MQ=255)
gACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcgc > 2:2099915/1‑93 (MQ=255)
tACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcg > 2:2117392/1‑93 (MQ=255)
tACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATCGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcg > 2:1592801/1‑93 (MQ=255)
aCTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcgt > 1:5146840/1‑93 (MQ=255)
tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa < 1:4845053/93‑1 (MQ=255)
tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa > 2:4955593/1‑93 (MQ=255)
tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa < 1:1450957/93‑1 (MQ=255)
tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa < 2:4112638/93‑1 (MQ=255)
tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCACCCTGTTTTCACCAGCGTCATCGCGTCGTCa > 2:2876909/1‑93 (MQ=255)
cATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAg > 2:4022135/1‑93 (MQ=255)
aTAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGa > 1:648636/1‑93 (MQ=255)
tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc > 1:4245598/1‑93 (MQ=255)
tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc > 2:813363/1‑93 (MQ=255)
tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc > 2:5770639/1‑93 (MQ=255)
aGGACCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACt < 1:1275071/93‑1 (MQ=255)
ggTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACtg < 1:1835428/93‑1 (MQ=255)
tCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACtgtg > 1:4340199/1‑93 (MQ=255)
cccAAGATCAACGAACCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTgg < 2:299900/93‑1 (MQ=255)
cccAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTgg < 2:4593650/93‑1 (MQ=255)
cAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGc > 1:4505436/1‑93 (MQ=255)
cAAGATAAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGc < 2:4992002/93‑1 (MQ=255)
aaGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCt > 1:4211084/1‑93 (MQ=255)
aaGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCt > 2:3642121/1‑93 (MQ=255)
gATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGa < 1:2719515/93‑1 (MQ=255)
aTCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGAc < 1:2400808/93‑1 (MQ=255)
tCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACg > 1:2469125/1‑93 (MQ=255)
cAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGc > 2:3882780/1‑93 (MQ=255)
aaCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGcc < 2:5063129/93‑1 (MQ=255)
aCGAAGCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCg < 2:687358/93‑1 (MQ=255)
aCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCg < 1:5393332/93‑1 (MQ=255)
aaaCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTa > 2:2216748/1‑93 (MQ=255)
aaaCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTa < 2:3754888/93‑1 (MQ=255)
aCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATc < 2:7152/93‑1 (MQ=255)
ccgccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATcc < 1:5506659/93‑1 (MQ=255)
cggcgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCt < 1:927536/90‑1 (MQ=255)
cgccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCt < 1:2972251/93‑1 (MQ=255)
gccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTg > 2:4425545/1‑93 (MQ=255)
gccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTg < 2:3456678/93‑1 (MQ=255)
ccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGa > 1:3788259/1‑93 (MQ=255)
ccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGa < 1:1070022/93‑1 (MQ=255)
gTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACa > 2:1618037/1‑93 (MQ=255)
aTTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACaaa > 1:4004225/1‑93 (MQ=255)
ttGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAg > 1:3750716/1‑93 (MQ=255)
tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa < 1:2299879/93‑1 (MQ=255)
tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa < 1:4377255/93‑1 (MQ=255)
tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa < 2:906857/93‑1 (MQ=255)
cccAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtt > 2:913481/1‑93 (MQ=255)
cccAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtt > 2:1110761/1‑93 (MQ=255)
cAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtttt > 2:2929397/1‑93 (MQ=255)
aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa < 1:4597006/93‑1 (MQ=255)
aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa < 2:1233828/93‑1 (MQ=255)
aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa < 1:6084726/93‑1 (MQ=255)
gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa < 1:3684089/93‑1 (MQ=255)
gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa < 2:1510024/93‑1 (MQ=255)
gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa > 2:1218388/1‑93 (MQ=255)
|
CATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA > NC_000913/2777207‑2777386
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAAAAT > NC_000913/2777204‑2777389
|
CATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGC > SRR4302533.437178/1‑94 (MQ=60)
ATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCA > SRR4302533.949866/1‑94 (MQ=60)
ATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCA > SRR4302533.3829703/1‑94 (MQ=60)
ATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCA > SRR4302533.3800146/1‑94 (MQ=60)
ATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCA > SRR4302533.2775127/1‑94 (MQ=60)
ATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCA > SRR4302533.4719415/1‑94 (MQ=60)
ATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAC > SRR4302533.3898563/1‑94 (MQ=60)
ATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAC > SRR4302533.3862765/1‑94 (MQ=60)
TTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACG < SRR4302533.3995802/94‑1 (MQ=60)
GGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATCCTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAA < SRR4302533.5775455/94‑1 (MQ=60)
GTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAG < SRR4302533.5366785/94‑1 (MQ=60)
GTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAG > SRR4302533.6290154/1‑94 (MQ=60)
TCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGC > SRR4302533.3763903/1‑94 (MQ=60)
ctcggcattcctgctgaaccgctcttccgatctgctgtaTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAT < SRR4302533.123695/55‑1 (MQ=60)
AGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAT < SRR4302533.677987/94‑1 (MQ=60)
GGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATC > SRR4302533.4530021/1‑94 (MQ=60)
GTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCC > SRR4302533.2160807/1‑94 (MQ=60)
TTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCC > SRR4302533.1328809/1‑94 (MQ=60)
TTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCC > SRR4302533.2619461/1‑94 (MQ=60)
TCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCC > SRR4302533.5384658/1‑94 (MQ=60)
TCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCC > SRR4302533.4573758/1‑94 (MQ=60)
CCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCT > SRR4302533.4450335/1‑94 (MQ=60)
CCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCT < SRR4302533.4250730/94‑1 (MQ=60)
CAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTC > SRR4302533.417948/1‑94 (MQ=60)
CAGTTCCTGTTGCCGTCAATTTTCAGGACATACTAATAGGTCCCAAAATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTC < SRR4302533.1202405/94‑1 (MQ=60)
AGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCC > SRR4302533.5821037/1‑94 (MQ=60)
AGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCC > SRR4302533.1335524/1‑94 (MQ=60)
GTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCC > SRR4302533.725495/1‑94 (MQ=60)
TGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCC > SRR4302533.785189/1‑94 (MQ=60)
CTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTG < SRR4302533.692672/94‑1 (MQ=60)
TGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCACCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGT < SRR4302533.711107/94‑1 (MQ=60)
GTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCTCTCCCCCTGCT > SRR4302533.5885745/1‑94 (MQ=60)
TGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACNNAGCATCCCCTCCCCNTGTNTT > SRR4302533.2906321/1‑94 (MQ=60)
TGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTT > SRR4302533.5880906/1‑94 (MQ=60)
GCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTC < SRR4302533.4838479/94‑1 (MQ=60)
GCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTC > SRR4302533.404669/1‑94 (MQ=60)
CCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCA > SRR4302533.4367723/1‑94 (MQ=60)
CCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCA > SRR4302533.3115592/1‑94 (MQ=60)
CGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCAC > SRR4302533.3221738/1‑94 (MQ=60)
GTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACC > SRR4302533.2889057/1‑94 (MQ=60)
GTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACC < SRR4302533.5920303/94‑1 (MQ=60)
ttgttttcaAGGACATACTCATAGGTCCCAAGATCAACGAAGCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCA < SRR4302533.1287309/85‑1 (MQ=60)
TCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCA < SRR4302533.3203154/94‑1 (MQ=60)
CACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAG > SRR4302533.2608399/1‑94 (MQ=60)
CACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAG > SRR4302533.1643774/1‑94 (MQ=60)
CTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCG > SRR4302533.5650942/1‑94 (MQ=60)
CTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCG > SRR4302533.5195112/1‑94 (MQ=60)
TTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGT < SRR4302533.3887850/94‑1 (MQ=60)
AAGGACATACTCATAGGTCCCAAGCTCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATC < SRR4302533.3774938/94‑1 (MQ=60)
GACATCCTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCG < SRR4302533.276533/94‑1 (MQ=60)
CATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTC > SRR4302533.6216092/1‑94 (MQ=60)
CATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTC > SRR4302533.5399537/1‑94 (MQ=60)
CATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTC > SRR4302533.3898814/1‑94 (MQ=60)
ATCCTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCG < SRR4302533.4981404/94‑1 (MQ=60)
ATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCG > SRR4302533.4692292/1‑94 (MQ=60)
ATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCG > SRR4302533.2641825/1‑94 (MQ=60)
ATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCG > SRR4302533.4866454/1‑94 (MQ=60)
TACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGT > SRR4302533.5177942/1‑94 (MQ=60)
CTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCA > SRR4302533.2246552/1‑94 (MQ=60)
CTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCA > SRR4302533.434022/1‑94 (MQ=60)
TCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAG < SRR4302533.4874418/94‑1 (MQ=60)
TCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAG < SRR4302533.1459712/94‑1 (MQ=60)
CATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGA > SRR4302533.652460/1‑94 (MQ=60)
ATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAC > SRR4302533.4271229/1‑94 (MQ=60)
ATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATAGCGTCGTCAGAC > SRR4302533.3115203/1‑94 (MQ=60)
AGGACCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTG < SRR4302533.1282738/94‑1 (MQ=60)
GGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGT > SRR4302533.82078/1‑94 (MQ=60)
GGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGT < SRR4302533.1846627/94‑1 (MQ=60)
GTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTG > SRR4302533.4366359/1‑94 (MQ=60)
TCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGG > SRR4302533.1485083/1‑94 (MQ=60)
TCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGG < SRR4302533.2461836/94‑1 (MQ=60)
CCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGC > SRR4302533.4532728/1‑94 (MQ=60)
CAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGTCTGTGGGCT > SRR4302533.4019505/1‑94 (MQ=60)
CAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCT > SRR4302533.368753/1‑94 (MQ=60)
CAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCT > SRR4302533.4236556/1‑94 (MQ=60)
CAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCT > SRR4302533.4035084/1‑94 (MQ=60)
AGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGA > SRR4302533.3039099/1‑94 (MQ=60)
GATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGAC > SRR4302533.5693108/1‑94 (MQ=60)
GATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGAC < SRR4302533.2736208/94‑1 (MQ=60)
GATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGAC < SRR4302533.2910671/94‑1 (MQ=60)
ATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACG < SRR4302533.2415635/94‑1 (MQ=60)
ATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACG < SRR4302533.5467564/94‑1 (MQ=60)
ATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACG > SRR4302533.2484355/1‑94 (MQ=60)
ATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACG > SRR4302533.750722/1‑94 (MQ=60)
ACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCGGG < SRR4302533.5465342/94‑1 (MQ=60)
ACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGG < SRR4302533.5425736/94‑1 (MQ=60)
CGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTTTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGT < SRR4302533.4112040/94‑1 (MQ=60)
GAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTA > SRR4302533.6319775/1‑94 (MQ=60)
AAGCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTAT < SRR4302533.985122/94‑1 (MQ=60)
AAACCGCCGGTATTGCCCAGCGCAAACGAAGCTTCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTAT < SRR4302533.3776974/94‑1 (MQ=60)
AAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTAT > SRR4302533.654612/1‑94 (MQ=60)
ACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCCGACGCCGGTATCC > SRR4302533.2439624/1‑94 (MQ=60)
CCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCT < SRR4302533.5539889/94‑1 (MQ=60)
CGGCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTG < SRR4302533.932982/94‑1 (MQ=60)
CGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTG < SRR4302533.2990438/94‑1 (MQ=60)
GCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGA > SRR4302533.3811460/1‑94 (MQ=60)
CCGTTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAA < SRR4302533.63391/94‑1 (MQ=60)
CCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAA < SRR4302533.1076327/94‑1 (MQ=60)
CCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAA > SRR4302533.5650322/1‑94 (MQ=60)
GGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACA > SRR4302533.2133564/1‑94 (MQ=60)
GGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACA > SRR4302533.2393655/1‑94 (MQ=60)
GTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAA > SRR4302533.5900976/1‑94 (MQ=60)
TATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAA < SRR4302533.4758825/94‑1 (MQ=60)
TATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAA > SRR4302533.4028603/1‑94 (MQ=60)
ATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAG > SRR4302533.346927/1‑94 (MQ=60)
ATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAG > SRR4302533.3773713/1‑94 (MQ=60)
TGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAT < SRR4302533.2314135/94‑1 (MQ=60)
TGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAT < SRR4302533.4403682/94‑1 (MQ=60)
CCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTT < SRR4302533.4330953/94‑1 (MQ=60)
CCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTT > SRR4302533.1167740/1‑94 (MQ=60)
CAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTA > SRR4302533.1311913/1‑94 (MQ=60)
AGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA < SRR4302533.6121515/94‑1 (MQ=60)
AGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA < SRR4302533.2245924/94‑1 (MQ=60)
AGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA < SRR4302533.4624852/94‑1 (MQ=60)
GCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAAA < SRR4302533.3706732/94‑1 (MQ=60)
CGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAAAA < SRR4302533.2333332/94‑1 (MQ=60)
GCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAAAAT > SRR4302533.5612351/1‑94 (MQ=60)
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CATCATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAAAAT > NC_000913/2777204‑2777389
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
