Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,851,044 |
A→G |
T296A (ACG→GCG) |
hypD → |
HypD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,851,044 | 0 | A | G | 100.0%
| 645.6
/ NA
| 204 | T296A (ACG→GCG) | hypD | HypD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/96); total (108/96) |
Only 100 of 210 total aligned reads displayed.
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG > NC_000913/2850955‑2851133
|
cgcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGgcgc < 2:2238301/93‑1 (MQ=255)
cgcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGgcgc < 1:3511698/93‑1 (MQ=255)
gcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGcc > 1:5762466/1‑93 (MQ=255)
aaCAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCgg > 2:5379361/1‑93 (MQ=255)
ggCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCCGATTa > 1:768954/1‑93 (MQ=255)
gCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTAt < 2:2815992/93‑1 (MQ=255)
cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc < 2:5582879/93‑1 (MQ=255)
cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc < 2:6125263/93‑1 (MQ=255)
aTTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCaa > 2:3767996/1‑93 (MQ=255)
aTTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCaa > 2:2993294/1‑93 (MQ=255)
ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc < 1:667941/93‑1 (MQ=255)
ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCCGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc < 1:4262332/93‑1 (MQ=255)
gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa < 2:3749156/93‑1 (MQ=255)
gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa < 2:5319886/93‑1 (MQ=255)
ccGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGAt < 2:5669065/93‑1 (MQ=255)
cGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGAtt < 1:981973/93‑1 (MQ=255)
tatttgtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc < 2:196354/89‑1 (MQ=255)
gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc > 2:1558771/1‑93 (MQ=255)
gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc < 1:3547533/93‑1 (MQ=255)
aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg > 1:4627323/1‑93 (MQ=255)
aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg > 1:3670509/1‑93 (MQ=255)
aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGGGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg > 1:2075840/1‑93 (MQ=255)
tgtgTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGa > 2:2478120/1‑93 (MQ=255)
gtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGc > 2:4810305/1‑93 (MQ=255)
gtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGc < 2:2320773/93‑1 (MQ=255)
tCTGTGTCAACGGCGACAGCGAATGGGGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCg > 1:755271/1‑93 (MQ=255)
cTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGa > 1:535528/1‑93 (MQ=255)
gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg > 2:206169/1‑93 (MQ=255)
gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg > 1:4126068/1‑93 (MQ=255)
gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg > 2:2404035/1‑93 (MQ=255)
tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc < 1:3752218/93‑1 (MQ=255)
tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc > 2:5863626/1‑93 (MQ=255)
tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc > 1:4321033/1‑93 (MQ=255)
gccAACGGCGACAGCGAGTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCTCCGGATTATCAACGATTCGATGCCGAAGca < 2:1408112/91‑1 (MQ=255)
tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac < 1:4378711/93‑1 (MQ=255)
tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac > 1:2414110/1‑93 (MQ=255)
tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac < 1:1464057/93‑1 (MQ=255)
cAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcaca < 2:3568486/93‑1 (MQ=255)
aCGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAtt < 2:1562601/93‑1 (MQ=255)
ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc < 1:5602324/93‑1 (MQ=255)
ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc < 2:6216490/93‑1 (MQ=255)
gCGACAGCGAATGGCGCGGCTTAGGCGTGATTGACTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACGTTTca > 2:394862/1‑92 (MQ=255)
gCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTcc > 2:4003820/1‑93 (MQ=255)
gCGACAGCGAATGGCGCGGCGTAGTCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATCTcc > 2:4484123/1‑93 (MQ=255)
gACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGc > 2:3414485/1‑93 (MQ=255)
aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc > 1:2883428/1‑93 (MQ=255)
aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc > 1:2699489/1‑93 (MQ=255)
aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc > 2:1207649/1‑93 (MQ=255)
cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc > 2:2274993/1‑93 (MQ=255)
cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc > 1:2102816/1‑93 (MQ=255)
cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc < 1:2532163/93‑1 (MQ=255)
gCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCgg > 1:539070/1‑93 (MQ=255)
gAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCa < 1:4893331/93‑1 (MQ=255)
gAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCa > 1:213808/1‑93 (MQ=255)
aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc > 2:1519717/1‑93 (MQ=255)
aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc > 2:2169218/1‑93 (MQ=255)
aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc > 1:1996331/1‑93 (MQ=255)
aTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAcc < 1:1872188/93‑1 (MQ=255)
tGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCg > 1:2506038/1‑93 (MQ=255)
ggCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgc < 1:6233409/93‑1 (MQ=255)
gcgcGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgca < 2:1123450/93‑1 (MQ=255)
gcgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagc < 1:1605726/93‑1 (MQ=255)
gcgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagc < 1:3802480/93‑1 (MQ=255)
cgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagca < 2:6045826/93‑1 (MQ=255)
cgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagca < 1:3239092/93‑1 (MQ=255)
ggCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGcagcag > 2:2920553/1‑93 (MQ=255)
gCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAgg > 2:5800188/1‑93 (MQ=255)
cTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGt > 2:234277/1‑93 (MQ=255)
cTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGt < 2:371718/93‑1 (MQ=255)
ttAGGCGTGATTGAATCTTCTGGCGTGCTCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc < 1:3737511/93‑1 (MQ=255)
ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc > 2:4202588/1‑93 (MQ=255)
ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc < 2:672696/93‑1 (MQ=255)
ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc < 1:1551837/93‑1 (MQ=255)
ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGAACATTTCCGCCCGGCACCGCAGCAGGTc > 1:1044317/1‑93 (MQ=255)
aGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTg < 1:1520762/93‑1 (MQ=255)
ggCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGc > 2:756307/1‑93 (MQ=255)
ggCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGc < 2:2952960/93‑1 (MQ=255)
gCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCCGCACCGCAGCAGGTCTGCg > 2:1453619/1‑93 (MQ=255)
cGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGa < 1:3058242/93‑1 (MQ=255)
tGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATg < 2:3171911/93‑1 (MQ=255)
gATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGa < 2:3111721/93‑1 (MQ=255)
ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc < 1:1145108/93‑1 (MQ=255)
ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc < 1:5167999/93‑1 (MQ=255)
ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc > 2:4236891/1‑93 (MQ=255)
gAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcg > 1:1778372/1‑93 (MQ=255)
aTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcg < 1:4725359/93‑1 (MQ=255)
tcttctGGCGTGCACATGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgc < 2:3036973/93‑1 (MQ=255)
cttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcg < 2:2753274/93‑1 (MQ=255)
tGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgcgcg > 1:4591884/1‑93 (MQ=255)
ggCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGt > 1:1575815/1‑93 (MQ=255)
gCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGtt < 1:5684044/93‑1 (MQ=255)
gTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtgt > 1:3505483/1‑93 (MQ=255)
cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt < 2:4282212/93‑1 (MQ=255)
cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt < 1:5289263/93‑1 (MQ=255)
cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt > 1:5938333/1‑93 (MQ=255)
aCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg < 2:4126068/93‑1 (MQ=255)
aCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg < 1:4038501/93‑1 (MQ=255)
ccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGa < 2:4627323/93‑1 (MQ=255)
ccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGa > 2:2580181/1‑93 (MQ=255)
cTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAg > 2:50882/1‑93 (MQ=255)
|
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG > NC_000913/2850955‑2851133
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTAT > NC_000913/2850951‑2851137
|
CTGGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGCGATTGAATCTTCTGGCGTGCACCTGC > SRR4302533.4556052/1‑94 (MQ=60)
GGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCG < SRR4302533.4844927/94‑1 (MQ=60)
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACTGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCC > SRR4302533.2170784/1‑94 (MQ=60)
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCC < SRR4302533.3533344/94‑1 (MQ=60)
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCC > SRR4302533.3806706/1‑94 (MQ=60)
CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCC > SRR4302533.5797244/1‑94 (MQ=60)
GCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCG > SRR4302533.327578/1‑94 (MQ=60)
CAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATT > SRR4302533.211153/1‑94 (MQ=60)
CAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATT > SRR4302533.5780666/1‑94 (MQ=60)
AGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCCGATTA > SRR4302533.773485/1‑94 (MQ=60)
TTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACG < SRR4302533.671887/94‑1 (MQ=60)
TTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCCGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACG < SRR4302533.4288012/94‑1 (MQ=60)
CCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATT > SRR4302533.5851885/1‑94 (MQ=60)
CGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTC < SRR4302533.987728/94‑1 (MQ=60)
CGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTC < SRR4302533.1801211/94‑1 (MQ=60)
GATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCG > SRR4302533.4655369/1‑94 (MQ=60)
GATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCG > SRR4302533.3693069/1‑94 (MQ=60)
GATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCG < SRR4302533.3569398/94‑1 (MQ=60)
GATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCG > SRR4302533.1145222/1‑94 (MQ=60)
GATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGGGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCG > SRR4302533.2088617/1‑94 (MQ=60)
TGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGAT < SRR4302533.3527452/94‑1 (MQ=60)
GTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATG < SRR4302533.1475017/94‑1 (MQ=60)
TGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGC > SRR4302533.4314242/1‑94 (MQ=60)
GTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCC < SRR4302533.2034250/94‑1 (MQ=60)
TTCTGTGTCAACGGCGACAGCGAATGGGGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCG > SRR4302533.759716/1‑94 (MQ=60)
TCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGA > SRR4302533.538709/1‑94 (MQ=60)
CTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAA > SRR4302533.1261360/1‑94 (MQ=60)
TGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAG < SRR4302533.564550/94‑1 (MQ=60)
TGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAG > SRR4302533.4670392/1‑94 (MQ=60)
TGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAG > SRR4302533.4151114/1‑94 (MQ=60)
GTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGC > SRR4302533.4347059/1‑94 (MQ=60)
TGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCA < SRR4302533.3775221/94‑1 (MQ=60)
GTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCAC > SRR4302533.2429023/1‑94 (MQ=60)
GTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCAC > SRR4302533.1546031/1‑94 (MQ=60)
GTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCAC > SRR4302533.4116782/1‑94 (MQ=60)
TCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACA < SRR4302533.4405147/94‑1 (MQ=60)
TCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACA < SRR4302533.4426066/94‑1 (MQ=60)
TCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACA < SRR4302533.1472881/94‑1 (MQ=60)
CAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAT > SRR4302533.3143151/1‑94 (MQ=60)
CAACGGCGACAGAGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAT < SRR4302533.3021660/94‑1 (MQ=60)
CGGCGACAGCGAATGGCGCGCCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTC < SRR4302533.2853230/94‑1 (MQ=60)
GGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCC < SRR4302533.5636176/94‑1 (MQ=60)
GCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCG > SRR4302533.4310148/1‑94 (MQ=60)
GACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCC > SRR4302533.2901163/1‑94 (MQ=60)
GACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCC > SRR4302533.4937823/1‑94 (MQ=60)
GACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCC > SRR4302533.2716049/1‑94 (MQ=60)
ACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCC > SRR4302533.2115783/1‑94 (MQ=60)
CAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCG < SRR4302533.536675/94‑1 (MQ=60)
CAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCG < SRR4302533.5413619/94‑1 (MQ=60)
CAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCG < SRR4302533.2547751/94‑1 (MQ=60)
AGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGG > SRR4302533.4640961/1‑94 (MQ=60)
AGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGG > SRR4302533.542275/1‑94 (MQ=60)
CGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCA > SRR4302533.215154/1‑94 (MQ=60)
CGAATGGCGCGGCGTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCA < SRR4302533.3771523/94‑1 (MQ=60)
GAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAC < SRR4302533.4922991/94‑1 (MQ=60)
GAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAC > SRR4302533.2008600/1‑94 (MQ=60)
AATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACC < SRR4302533.3628119/94‑1 (MQ=60)
AATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACC < SRR4302533.3734360/94‑1 (MQ=60)
ATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCG > SRR4302533.2521489/1‑94 (MQ=60)
ATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCG < SRR4302533.1883602/94‑1 (MQ=60)
TGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGC > SRR4302533.3552648/1‑94 (MQ=60)
GGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCA < SRR4302533.6270732/94‑1 (MQ=60)
CGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGC < SRR4302533.3955794/94‑1 (MQ=60)
CGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGC > SRR4302533.5608024/1‑94 (MQ=60)
GCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCA < SRR4302533.1615446/94‑1 (MQ=60)
GCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCA < SRR4302533.3825749/94‑1 (MQ=60)
GCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCA > SRR4302533.2544769/1‑94 (MQ=60)
CGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAG < SRR4302533.3259055/94‑1 (MQ=60)
CTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGAACATTTCCGCCCGGCACCGCAGCAGGTC > SRR4302533.1050456/1‑94 (MQ=60)
TTAGGCGTGATTGAATCTTCTGGCGTGCTCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCT < SRR4302533.3760435/94‑1 (MQ=60)
TTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCT < SRR4302533.1561180/94‑1 (MQ=60)
AGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAGCGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGC < SRR4302533.1947961/94‑1 (MQ=60)
AGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGC < SRR4302533.1529917/94‑1 (MQ=60)
GGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCG > SRR4302533.2469322/1‑94 (MQ=60)
GCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGA > SRR4302533.5233007/1‑94 (MQ=60)
CGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGAT < SRR4302533.3077008/94‑1 (MQ=60)
GTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATG < SRR4302533.1606959/94‑1 (MQ=60)
GATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAC > SRR4302533.742262/1‑94 (MQ=60)
GATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAC < SRR4302533.83896/94‑1 (MQ=60)
TTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCC > SRR4302533.5509812/1‑94 (MQ=60)
TTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCC < SRR4302533.1151943/94‑1 (MQ=60)
TTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCC < SRR4302533.2081544/94‑1 (MQ=60)
TTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCC < SRR4302533.5199195/94‑1 (MQ=60)
TGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCG > SRR4302533.1789200/1‑94 (MQ=60)
TGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCG < SRR4302533.1564054/94‑1 (MQ=60)
GAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGC > SRR4302533.4184536/1‑94 (MQ=60)
AATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCG > SRR4302533.4398061/1‑94 (MQ=60)
ATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGC < SRR4302533.4754010/94‑1 (MQ=60)
TCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCG > SRR4302533.3515959/1‑94 (MQ=60)
TCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGC > SRR4302533.603010/1‑94 (MQ=60)
TCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGC > SRR4302533.1730092/1‑94 (MQ=60)
CTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGGCCCGCGCcggcg > SRR4302533.779991/1‑89 (MQ=60)
CTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCG > SRR4302533.4619701/1‑94 (MQ=60)
TGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGT > SRR4302533.1585302/1‑94 (MQ=60)
GGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTT < SRR4302533.214588/94‑1 (MQ=60)
GGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTT < SRR4302533.760496/94‑1 (MQ=60)
GGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTT < SRR4302533.2583481/94‑1 (MQ=60)
GCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTG < SRR4302533.5718379/94‑1 (MQ=60)
CGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGT > SRR4302533.3527092/1‑94 (MQ=60)
GTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTG > SRR4302533.6333725/1‑94 (MQ=60)
GCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGT > SRR4302533.5974236/1‑94 (MQ=60)
CACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTG > SRR4302533.4901461/1‑94 (MQ=60)
CACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTG < SRR4302533.5320941/94‑1 (MQ=60)
ACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGA < SRR4302533.4063075/94‑1 (MQ=60)
CTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGG > SRR4302533.1902433/1‑94 (MQ=60)
TGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGT < SRR4302533.188052/94‑1 (MQ=60)
GGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTA < SRR4302533.580396/94‑1 (MQ=60)
GGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTA > SRR4302533.3030037/1‑94 (MQ=60)
GGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTA < SRR4302533.1573759/94‑1 (MQ=60)
GCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTAT < SRR4302533.6302764/94‑1 (MQ=60)
GCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTAT < SRR4302533.2898806/94‑1 (MQ=60)
GCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTAT < SRR4302533.1498661/94‑1 (MQ=60)
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CTGGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTAT > NC_000913/2850951‑2851137
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
