Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,194,577 |
2 bp→GC |
coding (97‑98/774 nt) |
yjaD → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,194,577 | 0 | C | G | 100.0%
| 609.3
/ NA
| 191 | R33A (CGG→GCG) | yjaD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (63/128); total (63/128) |
| * | NC_000913 | 4,194,578 | 0 | G | C | 100.0%
| 617.6
/ NA
| 191 | R33A (CGG→GCG) | yjaD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (63/128); total (63/128) |
Only 100 of 195 total aligned reads displayed.
AATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAACGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC > NC_000913/4194492‑4194664
||
aaTTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCaaa < 1:4294440/93‑1 (MQ=255)
aaTTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCaaa > 1:6027707/1‑93 (MQ=255)
aTTGAAAAATTAGATCACGGCTGGTGGGACGTCAGCCATGAACAAAAATTATGGATGTCGAAGGGAGAATTTCAATATTGTGAAGCAGCAAAt > 2:5520856/1‑93 (MQ=255)
tGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAAttt < 1:5826643/93‑1 (MQ=255)
gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc < 2:5384695/93‑1 (MQ=255)
gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc < 1:6224001/93‑1 (MQ=255)
aaaaaTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCg > 2:3896858/1‑93 (MQ=255)
aaaTTAGATCACGGCTGGTGTGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGAt < 1:5811005/93‑1 (MQ=255)
aaaTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGAt < 2:2501287/93‑1 (MQ=255)
aTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCt > 1:4449109/1‑93 (MQ=255)
aTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCt > 1:4144842/1‑93 (MQ=255)
aTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCt > 1:743689/1‑93 (MQ=255)
aTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCt > 2:2269185/1‑93 (MQ=255)
tAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtg < 2:2563592/93‑1 (MQ=255)
aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt < 2:1672788/93‑1 (MQ=255)
gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg > 1:2668942/1‑93 (MQ=255)
gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg > 2:3985914/1‑93 (MQ=255)
gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg < 2:5192464/93‑1 (MQ=255)
gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg < 1:4048439/93‑1 (MQ=255)
gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg < 2:2910541/93‑1 (MQ=255)
aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg > 2:4948062/1‑93 (MQ=255)
aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg > 2:2710247/1‑93 (MQ=255)
aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg < 1:1748166/93‑1 (MQ=255)
aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg < 2:5733519/93‑1 (MQ=255)
cGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCa > 2:5559689/1‑93 (MQ=255)
cTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcg > 2:1541678/1‑93 (MQ=255)
cTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcg < 1:3983827/93‑1 (MQ=255)
ggtggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcgcg > 2:2413425/1‑93 (MQ=255)
ggtggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcgcg < 2:5166586/93‑1 (MQ=255)
tggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCa < 1:359715/93‑1 (MQ=255)
gtcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACaa > 2:3730487/1‑93 (MQ=255)
tcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCAATCTTGTGGGTCAGCGCGCACTACaaa < 1:544794/93‑1 (MQ=255)
aGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGATGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATc < 1:3388661/93‑1 (MQ=255)
aGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATc < 2:4586255/93‑1 (MQ=255)
aGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATc < 2:6026144/93‑1 (MQ=255)
gCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCg > 1:3744149/1‑93 (MQ=255)
ccATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCgg < 2:2124172/93‑1 (MQ=255)
ccATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCgg > 1:5778587/1‑93 (MQ=255)
ccATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCgg > 2:1471748/1‑93 (MQ=255)
cATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGc < 2:734353/93‑1 (MQ=255)
cATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCCCACTACAAATCGGc < 2:5643858/93‑1 (MQ=255)
aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCg > 2:4107819/1‑93 (MQ=255)
aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCg > 2:5940660/1‑93 (MQ=255)
gAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGaa < 1:3879363/93‑1 (MQ=255)
gAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGaa < 2:4355499/93‑1 (MQ=255)
aaCAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAt < 1:1171484/93‑1 (MQ=255)
aaCAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAt > 1:1815292/1‑93 (MQ=255)
aCAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATg < 1:3279552/93‑1 (MQ=255)
aCAAAAATTACGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATg > 1:2321007/1‑93 (MQ=255)
cAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATgg < 1:569219/93‑1 (MQ=255)
cAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATgg < 1:1556122/93‑1 (MQ=255)
cAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATgg > 2:5575635/1‑93 (MQ=255)
aaaaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGc < 1:5730207/93‑1 (MQ=255)
aaaaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGc < 1:1707217/93‑1 (MQ=255)
aaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAg > 1:71658/1‑93 (MQ=255)
aaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAg < 2:31704/93‑1 (MQ=255)
aaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAg < 2:2681823/93‑1 (MQ=255)
aaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgg < 2:876511/93‑1 (MQ=255)
aaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgg > 1:4514925/1‑93 (MQ=255)
aaTTATGGTGGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgg < 2:3219733/93‑1 (MQ=255)
aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg < 1:4892307/93‑1 (MQ=255)
aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg < 2:2216047/93‑1 (MQ=255)
aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg < 2:2545552/93‑1 (MQ=255)
aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg > 1:2736729/1‑93 (MQ=255)
ttATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgggg < 1:4361434/93‑1 (MQ=255)
ttATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgggg > 1:2970443/1‑93 (MQ=255)
aTGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCATGGGGa > 1:3464722/1‑93 (MQ=255)
aTGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGa < 1:5574634/93‑1 (MQ=255)
aTGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGa < 1:3073438/93‑1 (MQ=255)
tGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGaa > 1:1592216/1‑93 (MQ=255)
tGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGaa < 2:5331764/93‑1 (MQ=255)
gCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGt > 1:664884/1‑93 (MQ=255)
gCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGt < 2:3597115/93‑1 (MQ=255)
cGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGttt < 1:3671483/93‑1 (MQ=255)
cGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGttt < 1:5260886/93‑1 (MQ=255)
gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg > 1:5050339/1‑93 (MQ=255)
gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg > 1:1086368/1‑93 (MQ=255)
gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg > 2:1125779/1‑93 (MQ=255)
gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg < 2:33002/93‑1 (MQ=255)
aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCTAATGGCAGGGGGAACCTGTTTgg < 2:4988175/93‑1 (MQ=255)
aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGTGGGCACCTGTTTgg > 2:6268929/1‑93 (MQ=255)
aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTgg < 2:1896117/93‑1 (MQ=255)
aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTgg < 1:869894/93‑1 (MQ=255)
gggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGtt > 1:257600/1‑93 (MQ=255)
gggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGtt > 1:4664526/1‑93 (MQ=255)
gagaATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAg < 2:4723568/93‑1 (MQ=255)
agaATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGGACCTGTTTGGTTAGt > 1:2204140/1‑93 (MQ=255)
ttGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaa < 2:1006703/93‑1 (MQ=255)
tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaac < 2:665260/93‑1 (MQ=255)
tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaac < 1:1339219/93‑1 (MQ=255)
tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaac < 2:5897953/93‑1 (MQ=255)
ccATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcag < 1:4703959/93‑1 (MQ=255)
ccATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcag < 2:4341118/93‑1 (MQ=255)
cATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagc < 2:3421825/93‑1 (MQ=255)
tatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagcag < 1:468384/93‑1 (MQ=255)
tatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagcag < 1:2512486/93‑1 (MQ=255)
tatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagcag > 1:5064723/1‑93 (MQ=255)
tatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGCTAGTACAAcagcag > 1:5617285/1‑93 (MQ=255)
ggCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAgcgg < 1:2460045/93‑1 (MQ=255)
ggCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAgcgg < 2:4525309/93‑1 (MQ=255)
||
AATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAACGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC > NC_000913/4194492‑4194664
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATCGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑CGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCGT > NC_000913/4194484‑4194666
|
GATCGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑G < SRR4302533.2093466/94‑1 (MQ=60)
CGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGTGAATTGCCATATGGCGAAGCGG > SRR4302533.418365/1‑94 (MQ=60)
CGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGG < SRR4302533.1131838/94‑1 (MQ=60)
CGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGG > SRR4302533.6120685/1‑94 (MQ=60)
CGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCCTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGG > SRR4302533.488917/1‑94 (MQ=60)
TAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAA > SRR4302533.6064234/1‑94 (MQ=60)
AATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAAT < SRR4302533.4320267/94‑1 (MQ=60)
TTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTT > SRR4302533.2542589/1‑94 (MQ=60)
TGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTC < SRR4302533.5861851/94‑1 (MQ=60)
TGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTC < SRR4302533.5779006/94‑1 (MQ=60)
GAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCG < SRR4302533.6261299/94‑1 (MQ=60)
AAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGA < SRR4302533.5294814/94‑1 (MQ=60)
AAATTAGATCACGGCTGGTGTGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATC < SRR4302533.5846099/94‑1 (MQ=60)
AATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCT > SRR4302533.4476017/1‑94 (MQ=60)
AATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCT > SRR4302533.748065/1‑94 (MQ=60)
AATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCT < SRR4302533.2416230/94‑1 (MQ=60)
AATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCT > SRR4302533.4169963/1‑94 (MQ=60)
ATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTT < SRR4302533.5733979/94‑1 (MQ=60)
TTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTG > SRR4302533.1589188/1‑94 (MQ=60)
TAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGT < SRR4302533.2650610/94‑1 (MQ=60)
AGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTG > SRR4302533.2685317/1‑94 (MQ=60)
GATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGG < SRR4302533.3795487/94‑1 (MQ=60)
GATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGG > SRR4302533.5630817/1‑94 (MQ=60)
GATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGG < SRR4302533.4073094/94‑1 (MQ=60)
GATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGG < SRR4302533.4992398/94‑1 (MQ=60)
ATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGG < SRR4302533.4721171/94‑1 (MQ=60)
ATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGG < SRR4302533.1758807/94‑1 (MQ=60)
CGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GGGGCAAATTTCGATCTTGTGGGGCAG > SRR4302533.4376216/1‑94 (MQ=60)
CGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAG < SRR4302533.671670/94‑1 (MQ=60)
CGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAG < SRR4302533.3596529/94‑1 (MQ=60)
GGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGC < SRR4302533.5948340/94‑1 (MQ=60)
CTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGC < SRR4302533.4008084/94‑1 (MQ=60)
CTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGC < SRR4302533.1720336/94‑1 (MQ=60)
TGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCAC < SRR4302533.2695372/94‑1 (MQ=60)
TGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCAC < SRR4302533.73023/94‑1 (MQ=60)
TGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCAC < SRR4302533.361905/94‑1 (MQ=60)
GGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACT > SRR4302533.1682412/1‑94 (MQ=60)
GTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTAC > SRR4302533.4708176/1‑94 (MQ=60)
TCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCAATCTTGTGGGTCAGCGCGCACTACAAAT < SRR4302533.548027/94‑1 (MQ=60)
AGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAT‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCG < SRR4302533.3409586/94‑1 (MQ=60)
AGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCG > SRR4302533.3767110/1‑94 (MQ=60)
GCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGG > SRR4302533.5813492/1‑94 (MQ=60)
CCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGC < SRR4302533.925951/94‑1 (MQ=60)
CCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGC > SRR4302533.1282381/1‑94 (MQ=60)
CATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCG > SRR4302533.5560836/1‑94 (MQ=60)
CATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCG < SRR4302533.1843020/94‑1 (MQ=60)
ATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGA < SRR4302533.5245133/94‑1 (MQ=60)
ATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGA > SRR4302533.3316662/1‑94 (MQ=60)
TGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAA > SRR4302533.652837/1‑94 (MQ=60)
GAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAT < SRR4302533.3903035/94‑1 (MQ=60)
GAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAT > SRR4302533.2798004/1‑94 (MQ=60)
GAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAT > SRR4302533.1826376/1‑94 (MQ=60)
GAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAAT < SRR4302533.4389697/94‑1 (MQ=60)
AACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATG < SRR4302533.5081977/94‑1 (MQ=60)
AACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATG < SRR4302533.1178517/94‑1 (MQ=60)
AACAAAAATTACGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATG > SRR4302533.2335373/1‑94 (MQ=60)
ACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGG < SRR4302533.3299798/94‑1 (MQ=60)
CAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGC < SRR4302533.1565488/94‑1 (MQ=60)
CAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGC < SRR4302533.572585/94‑1 (MQ=60)
AAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCA < SRR4302533.5764808/94‑1 (MQ=60)
AAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCA < SRR4302533.1717563/94‑1 (MQ=60)
AAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAG > SRR4302533.72119/1‑94 (MQ=60)
AAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGG > SRR4302533.4542264/1‑94 (MQ=60)
AAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGAAGG < SRR4302533.486518/94‑1 (MQ=60)
AATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGG < SRR4302533.855063/94‑1 (MQ=60)
AATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGG > SRR4302533.2753514/1‑94 (MQ=60)
ATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGG > SRR4302533.2988606/1‑94 (MQ=60)
ATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGG < SRR4302533.4921950/94‑1 (MQ=60)
TTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGG < SRR4302533.4387761/94‑1 (MQ=60)
TATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCATGGGGA > SRR4302533.3486108/1‑94 (MQ=60)
ATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAA < SRR4302533.5608322/94‑1 (MQ=60)
ATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAA > SRR4302533.1601845/1‑94 (MQ=60)
ATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAA < SRR4302533.3092303/94‑1 (MQ=60)
ATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAA < SRR4302533.2280055/94‑1 (MQ=60)
TGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGT < SRR4302533.6235395/94‑1 (MQ=60)
TGCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGT > SRR4302533.668810/1‑94 (MQ=60)
GCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTT > SRR4302533.4632735/1‑94 (MQ=60)
GCCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCCGTT > SRR4302533.3765443/1‑94 (MQ=60)
CCGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTT < SRR4302533.5819039/94‑1 (MQ=60)
CGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTG < SRR4302533.3694049/94‑1 (MQ=60)
CGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTG < SRR4302533.5292470/94‑1 (MQ=60)
CGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTG > SRR4302533.1092771/1‑94 (MQ=60)
CGAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTG > SRR4302533.5080883/1‑94 (MQ=60)
GAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGG < SRR4302533.4120279/94‑1 (MQ=60)
GAAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGG < SRR4302533.2505175/94‑1 (MQ=60)
AAGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGT < SRR4302533.875000/94‑1 (MQ=60)
AGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTT > SRR4302533.4692787/1‑94 (MQ=60)
AGGGAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTT > SRR4302533.259166/1‑94 (MQ=60)
GAGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGGACCTGTTTGGTTAGT > SRR4302533.2217725/1‑94 (MQ=60)
AGAATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTA < SRR4302533.3123577/94‑1 (MQ=60)
AATTGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACA < SRR4302533.1535679/94‑1 (MQ=60)
TGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACA > SRR4302533.5855891/1‑94 (MQ=60)
TGCCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACA < SRR4302533.1347280/94‑1 (MQ=60)
GCCATATGGCGAA‑GCGGCAAATTGCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAG < SRR4302533.4488050/94‑1 (MQ=60)
CCATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGC < SRR4302533.4732473/94‑1 (MQ=60)
ATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAG < SRR4302533.4039353/94‑1 (MQ=60)
ATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAG > SRR4302533.422286/1‑94 (MQ=60)
ATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAG > SRR4302533.5095317/1‑94 (MQ=60)
ATATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGCTAGTACAACAGCAG > SRR4302533.5651241/1‑94 (MQ=60)
TATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGC < SRR4302533.471181/94‑1 (MQ=60)
TATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGC < SRR4302533.2527966/94‑1 (MQ=60)
ATGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCTCTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCG < SRR4302533.3438873/94‑1 (MQ=60)
TGGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGG < SRR4302533.3086115/94‑1 (MQ=60)
GGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC < SRR4302533.2475226/94‑1 (MQ=60)
GGCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC < SRR4302533.1805750/94‑1 (MQ=60)
GCGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCG < SRR4302533.3984607/94‑1 (MQ=60)
CGAA‑GCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCGT > SRR4302533.4123966/1‑94 (MQ=60)
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GATCGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAA‑CGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCGT > NC_000913/4194484‑4194666
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
