Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,225,050 |
A→G |
E1215G (GAG→GGG) |
metH → |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,225,050 | 0 | A | G | 99.5%
| 678.7
/ ‑4.8
| 210 | E1215G (GAG→GGG) | metH | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (123/86); total (123/87) |
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 |
Only 100 of 213 total aligned reads displayed.
CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG > NC_000913/4224960‑4225138
|
cGGACAGAAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTCCCGAAGTTGGgc < 1:3408585/93‑1 (MQ=255)
gACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGgcgc > 1:3088071/1‑93 (MQ=255)
gCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggc > 1:5697374/1‑93 (MQ=255)
gCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggc > 1:3265025/1‑93 (MQ=255)
cAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCgctggct > 1:3797475/1‑93 (MQ=255)
agaactagGCTGTAGCAAAAATACAGCGGGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGctggctgg < 2:2542906/90‑1 (MQ=255)
agaactacGGTGTAGCAAAAATTCAGCGCGATGAGGTTGAAGTTTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGctggctgg < 1:4286731/90‑1 (MQ=255)
aGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGctggctgg < 2:2750179/93‑1 (MQ=255)
gTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCtggctggc > 1:1546713/1‑93 (MQ=255)
gTACTACCCTTTAGCACAAATTCAGCGCGACCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCtggctggc < 1:2711048/93‑1 (MQ=255)
actacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAc > 2:2117068/1‑93 (MQ=255)
actacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAc > 2:4148491/1‑93 (MQ=255)
ctgcGCTGTAGCACAAATTCAGCGCGATGAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCAcc < 1:3011706/90‑1 (MQ=255)
tacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCg > 1:4216101/1‑93 (MQ=255)
tacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCg > 2:3741291/1‑93 (MQ=255)
tacGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCg > 2:5412690/1‑93 (MQ=255)
ccGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGa < 1:3582207/92‑1 (MQ=255)
acGATGTCGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGa < 1:412241/93‑1 (MQ=255)
gCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAAt > 2:2784523/1‑93 (MQ=255)
gCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAAt > 2:4484353/1‑93 (MQ=255)
tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt > 2:4210855/1‑93 (MQ=255)
tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt > 1:563407/1‑93 (MQ=255)
tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt > 2:4420017/1‑93 (MQ=255)
tGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt > 1:5312616/1‑93 (MQ=255)
tGTAGCAAAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCt < 1:311184/93‑1 (MQ=255)
gTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTg > 1:3761018/1‑93 (MQ=255)
tAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTgg > 1:2229094/1‑93 (MQ=255)
agaacaAATTCAGCGCGATCAGTTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTggg < 1:1855798/90‑1 (MQ=255)
accacaAATCCAGCGCGCTCAGGTTGAAAATTGTCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTggg < 2:2447522/91‑1 (MQ=255)
aGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTggg > 2:2204186/1‑93 (MQ=255)
gccaaaaTTCAGCAAGATAAGTTTGAAGTTTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTgggg < 1:4534119/89‑1 (MQ=255)
gCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTgggg > 1:725284/1‑93 (MQ=255)
aaaaaTTCGGTGCGAAAAGTTTAAAGATCTTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa < 2:3373338/91‑1 (MQ=255)
aaaaaTTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTa < 2:6088307/91‑1 (MQ=255)
aaaTTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGGATg > 2:5134761/1‑93 (MQ=255)
atttCAGCGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGa < 2:4677479/91‑1 (MQ=255)
aaTTCANCTCGATCAGGTGAAATATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGa < 1:646829/93‑1 (MQ=255)
aaTTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGa > 1:5873667/1‑93 (MQ=255)
aTTCAGCGCGATAAGGTGGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAc < 2:5287286/93‑1 (MQ=255)
ttCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcg > 2:4946697/1‑93 (MQ=255)
tCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcgc > 1:5180688/1‑93 (MQ=255)
cAGCGCGAACAGGTTAAAGATTCTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAcgcg < 1:6108106/93‑1 (MQ=255)
aGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCgg > 1:109421/1‑93 (MQ=255)
gcgcGATCAGATTGAAGATAATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGa < 1:5926157/93‑1 (MQ=255)
cgcgATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGAc < 1:89320/93‑1 (MQ=255)
cgcgATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGAc < 1:2335505/93‑1 (MQ=255)
gATGAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGa < 2:576556/93‑1 (MQ=255)
gATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGa > 2:3952989/1‑93 (MQ=255)
acaaGGTTAAAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAt < 2:1163638/90‑1 (MQ=255)
aTCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAt > 2:1059288/1‑93 (MQ=255)
aTCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAt > 2:4065126/1‑93 (MQ=255)
cAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTc > 2:2617200/1‑93 (MQ=255)
ggTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTcac > 1:3937721/1‑93 (MQ=255)
ggTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTcac > 2:4553188/1‑93 (MQ=255)
gAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAt > 2:706925/1‑93 (MQ=255)
gAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGCATGACGCGGACTGATTCACAAAt > 2:822441/1‑93 (MQ=255)
aaGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATc < 1:1718705/93‑1 (MQ=255)
aTTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGt > 2:3693709/1‑93 (MQ=255)
aTTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGt > 2:3524736/1‑93 (MQ=255)
ttATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTc > 2:1433369/1‑93 (MQ=255)
aTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCAc < 2:2969257/93‑1 (MQ=255)
tGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACt > 2:567679/1‑93 (MQ=255)
tGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACt < 1:4805188/93‑1 (MQ=255)
ccgccgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACtttt > 1:2781442/1‑93 (MQ=255)
gccgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTcc < 2:2908166/93‑1 (MQ=255)
gccgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTcc < 2:4982296/93‑1 (MQ=255)
cgTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCtt > 1:3365657/1‑93 (MQ=255)
gTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTa < 2:5626905/93‑1 (MQ=255)
tAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTac < 2:157385/93‑1 (MQ=255)
tATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaa > 1:22835/1‑93 (MQ=255)
aTGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaac > 2:5838725/1‑93 (MQ=255)
aTGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaac < 1:4792585/93‑1 (MQ=255)
tGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaaca > 1:2184059/1‑93 (MQ=255)
tGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaacaaaca > 1:3020622/1‑93 (MQ=255)
tGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACaaaaaaca > 2:6016266/1‑93 (MQ=255)
gAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAg > 1:2156281/1‑93 (MQ=255)
gAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAg < 1:2838250/93‑1 (MQ=255)
aGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAgg > 1:3452107/1‑93 (MQ=255)
aGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAgg < 2:4905050/93‑1 (MQ=255)
aGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAgg < 2:4050660/93‑1 (MQ=255)
aGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAgg > 2:5230354/1‑93 (MQ=255)
gCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAggg > 2:629106/1‑93 (MQ=255)
gTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcg > 1:5228404/1‑93 (MQ=255)
gTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGgcg > 2:5528054/1‑93 (MQ=255)
aCCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTc > 2:611389/1‑93 (MQ=255)
ccGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACACACAGGGCGCTCa > 1:2491520/1‑93 (MQ=255)
ccGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGTGCGGTCa > 2:3462284/1‑93 (MQ=255)
cGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCaa < 2:6176525/93‑1 (MQ=255)
gAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAAt < 1:1027946/93‑1 (MQ=255)
gAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAAt < 2:264027/93‑1 (MQ=255)
gAAGTTGGGCGCTGGCTGGAACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAAt > 2:6162741/1‑93 (MQ=255)
aaGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATg < 2:592995/93‑1 (MQ=255)
aaGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATg < 2:1325246/93‑1 (MQ=255)
aaGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATg < 2:1846933/93‑1 (MQ=255)
aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATgg > 2:2153027/1‑92 (MQ=255)
aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa > 1:5284208/1‑93 (MQ=255)
aGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGa > 2:619255/1‑93 (MQ=255)
gTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAg < 2:5056577/93‑1 (MQ=255)
gTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAg > 1:3085056/1‑93 (MQ=255)
gTTGGGCGCTGGCTGGCACCGAATCTGGGGGATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGCGCGCTCAATGAg > 2:5013789/1‑93 (MQ=255)
|
CGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG > NC_000913/4224960‑4225138
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCC > NC_000913/4224957‑4225143
|
ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGG > SRR4302533.5749917/1‑94 (MQ=60)
CCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGG < SRR4302533.4042600/94‑1 (MQ=60)
CCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGC > SRR4302533.4182539/1‑94 (MQ=60)
CCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGC > SRR4302533.4288118/1‑94 (MQ=60)
CGGACAGAAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTCCCGAAGTTGGGCG < SRR4302533.3429642/94‑1 (MQ=60)
GGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGC > SRR4302533.3107056/1‑94 (MQ=60)
GGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGC > SRR4302533.3116312/1‑94 (MQ=60)
AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC > SRR4302533.5731789/1‑94 (MQ=60)
AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC > SRR4302533.4844841/1‑94 (MQ=60)
AGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGC > SRR4302533.3285170/1‑94 (MQ=60)
GCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCT > SRR4302533.3820721/1‑94 (MQ=60)
CAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTG > SRR4302533.3106386/1‑94 (MQ=60)
AGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGC > SRR4302533.1556034/1‑94 (MQ=60)
AGAACTACGGTGTAGCAAAAATTCAGCGCGATGAGGTTGAAGTTTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGC < SRR4302533.4312505/94‑1 (MQ=60)
GTACTACCCTTTAGCACAAATTCAGCGCGACCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCA < SRR4302533.2727690/94‑1 (MQ=60)
ACTCCGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACC < SRR4302533.2248068/94‑1 (MQ=60)
CTGCGCTGTAGCACAAATTCAGCGCGATGAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCG < SRR4302533.3030131/94‑1 (MQ=60)
CTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCG > SRR4302533.4241605/1‑94 (MQ=60)
TACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGA > SRR4302533.5215807/1‑94 (MQ=60)
CCGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAA < SRR4302533.3604271/94‑1 (MQ=60)
ACGATGTCGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAA < SRR4302533.414715/94‑1 (MQ=60)
CTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT > SRR4302533.5344454/1‑94 (MQ=60)
CTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCT > SRR4302533.566746/1‑94 (MQ=60)
TGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTG > SRR4302533.3784070/1‑94 (MQ=60)
TGTAGCAAAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTG < SRR4302533.313089/94‑1 (MQ=60)
GTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGG > SRR4302533.2242853/1‑94 (MQ=60)
acaaaAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGG < SRR4302533.4538101/89‑1 (MQ=60)
AGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGG > SRR4302533.729572/1‑94 (MQ=60)
AGAACAAATTCAGCGCGATCAGTTTAAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGG < SRR4302533.1867116/94‑1 (MQ=60)
gccaaaattcagcaagataagtTTGAAGTTTACGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGT < SRR4302533.4561573/72‑1 (MQ=60)
CACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTA < SRR4302533.2151247/94‑1 (MQ=60)
CAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATG > SRR4302533.1072740/1‑94 (MQ=60)
AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA > SRR4302533.1521621/1‑94 (MQ=60)
AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGA > SRR4302533.5909169/1‑94 (MQ=60)
AAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGGATGA > SRR4302533.2218390/1‑94 (MQ=60)
AATTCANCTCGATCAGGTGAAATATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC < SRR4302533.650640/94‑1 (MQ=60)
AATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGAC > SRR4302533.5718343/1‑94 (MQ=60)
ATTCACGGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACG < SRR4302533.3741964/94‑1 (MQ=60)
TTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGC > SRR4302533.5211973/1‑94 (MQ=60)
tcggcgcgacgaggttgaatattctcaCCGCCGTAAAGGTATGAGCGTTACCGATGTTGGGCGCTGGCTGTCACCGAATCTGGGGTATGACGCG < SRR4302533.5330644/67‑1 (MQ=60)
CAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGG > SRR4302533.5872909/1‑94 (MQ=60)
CAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGG > SRR4302533.110116/1‑94 (MQ=60)
CAGCGCGAACAGGTTAAAGATTCTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGG < SRR4302533.6144983/94‑1 (MQ=60)
GCGCGATCAGATTGAAGATAATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGAC < SRR4302533.5961980/94‑1 (MQ=60)
CGCGATCAGTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACT < SRR4302533.89885/94‑1 (MQ=60)
CGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACT < SRR4302533.2349961/94‑1 (MQ=60)
GCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTG > SRR4302533.6099791/1‑94 (MQ=60)
GATCAGGTTGAAGATTAGGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGAT < SRR4302533.5904487/94‑1 (MQ=60)
ATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATT < SRR4302533.6284102/94‑1 (MQ=60)
tcgggttaaaaattaccCCCGCCGTAAAGGTATGAGCCTTTCCCAAGTTGGGCCCTTGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTC < SRR4302533.5428262/77‑1 (MQ=58)
AGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCAC > SRR4302533.3961756/1‑94 (MQ=60)
AGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCAC > SRR4302533.3452081/1‑94 (MQ=60)
GTTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACA < SRR4302533.3355962/94‑1 (MQ=60)
TGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT > SRR4302533.367383/1‑94 (MQ=60)
TGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAAT > SRR4302533.4785081/1‑94 (MQ=60)
aatatttgGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCT < SRR4302533.431477/86‑1 (MQ=60)
AAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCT > SRR4302533.2787686/1‑94 (MQ=60)
AAGATTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCT < SRR4302533.1729126/94‑1 (MQ=60)
agtagGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTC < SRR4302533.2391520/89‑1 (MQ=60)
TTATCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCA < SRR4302533.1621969/94‑1 (MQ=60)
TGTGCCCGCCGTAAAGGTATGAGCGTTACCGAAGGTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCAC < SRR4302533.2919408/94‑1 (MQ=60)
TATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCAC < SRR4302533.2629886/94‑1 (MQ=60)
ATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACT > SRR4302533.482448/1‑94 (MQ=60)
TGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTT < SRR4302533.4834285/94‑1 (MQ=60)
TGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTT > SRR4302533.2269674/1‑94 (MQ=60)
TCCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTT < SRR4302533.3087945/94‑1 (MQ=60)
GCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTT > SRR4302533.3035774/1‑94 (MQ=60)
CCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTT > SRR4302533.3790896/1‑94 (MQ=60)
CCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTT > SRR4302533.2798529/1‑94 (MQ=60)
CCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTT > SRR4302533.1782453/1‑94 (MQ=60)
CCGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT > SRR4302533.3386446/1‑94 (MQ=60)
CGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTA < SRR4302533.3255157/94‑1 (MQ=60)
CGTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTA < SRR4302533.3089683/94‑1 (MQ=60)
GTAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAC < SRR4302533.4577171/94‑1 (MQ=60)
TAAAGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACA > SRR4302533.5298620/1‑94 (MQ=60)
AGGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACA > SRR4302533.3572429/1‑94 (MQ=60)
GGTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCCGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAA > SRR4302533.3409965/1‑94 (MQ=60)
GTATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAA > SRR4302533.22988/1‑94 (MQ=60)
ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA > SRR4302533.2333160/1‑94 (MQ=60)
ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA < SRR4302533.4821624/94‑1 (MQ=60)
ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA > SRR4302533.2197523/1‑94 (MQ=60)
ATGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACA > SRR4302533.3039110/1‑94 (MQ=60)
TGAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAG > SRR4302533.2169557/1‑94 (MQ=60)
GAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGG < SRR4302533.2855717/94‑1 (MQ=60)
GAGCGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGG > SRR4302533.3473420/1‑94 (MQ=60)
CGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCG < SRR4302533.2181724/94‑1 (MQ=60)
CGTTACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCG > SRR4302533.5259857/1‑94 (MQ=60)
ACCGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACACACAGGGCGCTCA > SRR4302533.2506865/1‑94 (MQ=60)
CGAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGGTCAAT > SRR4302533.4522376/1‑94 (MQ=60)
GAAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATG < SRR4302533.1033984/94‑1 (MQ=60)
AAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGA > SRR4302533.2451943/1‑94 (MQ=60)
AAGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGA > SRR4302533.5315864/1‑94 (MQ=60)
AGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG < SRR4302533.3921758/94‑1 (MQ=60)
AGTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAG > SRR4302533.3104025/1‑94 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC > SRR4302533.2815591/1‑94 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC > SRR4302533.4042201/1‑94 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC < SRR4302533.701918/94‑1 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCG > SRR4302533.5869748/1‑94 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCG < SRR4302533.5960154/94‑1 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCG < SRR4302533.824485/94‑1 (MQ=60)
TGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGC < SRR4302533.2481719/94‑1 (MQ=60)
TGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGC < SRR4302533.625559/94‑1 (MQ=60)
GGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCC < SRR4302533.1087951/94‑1 (MQ=60)
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ACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCC > NC_000913/4224957‑4225143
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
