Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,251,782 |
A→G |
V755A (GTG→GCG) |
plsB ← |
glycerol‑3‑phosphate acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,251,782 | 0 | A | G | 99.6%
| 833.0
/ NA
| 267 | V755A (GTG→GCG) | plsB | glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (148/117); total (150/117) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 276 total aligned reads displayed.
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCG > NC_000913/4251692‑4251871
|
tGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGcc < 1:435621/93‑1 (MQ=255)
gATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCg > 2:2737153/1‑93 (MQ=255)
aTAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAAcgccgc < 2:6181137/93‑1 (MQ=255)
tAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACgccgcc < 2:3662897/93‑1 (MQ=255)
aaaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCt < 1:552685/93‑1 (MQ=255)
aaaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCt < 1:2978549/93‑1 (MQ=255)
aaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCtt < 1:4164608/93‑1 (MQ=255)
aaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCtt < 1:320749/93‑1 (MQ=255)
aCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTg < 2:346359/93‑1 (MQ=255)
tcTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt < 1:6051401/92‑1 (MQ=255)
ccTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt > 1:4628433/1‑93 (MQ=255)
ccTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt < 2:1741659/93‑1 (MQ=255)
ccTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt > 1:3552219/1‑93 (MQ=255)
ccTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt > 1:2906116/1‑93 (MQ=255)
cTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTc > 2:4475262/1‑93 (MQ=255)
tCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCga > 1:1245274/1‑93 (MQ=255)
cATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaa > 1:5388660/1‑93 (MQ=255)
cATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaa > 2:3074497/1‑93 (MQ=255)
aTCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaag > 1:2708947/1‑93 (MQ=255)
tCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaaga > 2:1785100/1‑93 (MQ=255)
tCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaaga > 1:3617672/1‑93 (MQ=255)
tCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaaga < 1:1385492/93‑1 (MQ=255)
ttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTc < 1:1740293/93‑1 (MQ=255)
ttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTc < 1:3490354/93‑1 (MQ=255)
ttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTc > 1:4040773/1‑93 (MQ=255)
tCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGGCGCCTTGTCGAAGAACTcc > 2:4217131/1‑93 (MQ=255)
tCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTcc < 1:2813161/93‑1 (MQ=255)
cTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCg < 2:2382220/93‑1 (MQ=255)
cTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCg < 1:3940745/93‑1 (MQ=255)
cTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCg > 1:5974675/1‑93 (MQ=255)
tGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCgg > 2:1261736/1‑93 (MQ=255)
gCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGgc < 2:1586487/93‑1 (MQ=255)
cGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGTCGCCTTGTCGAAGAACTCCGgcgc > 2:5592655/1‑93 (MQ=255)
ggTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGcgcg < 2:4067778/93‑1 (MQ=255)
ggTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGcgcg > 1:1636780/1‑93 (MQ=255)
ttCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGtt < 2:5378022/93‑1 (MQ=255)
cGGCATCGCCGCTATCGCTGATATGCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGa < 1:4920271/93‑1 (MQ=255)
ggCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAt < 2:3812098/93‑1 (MQ=255)
gCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATg > 1:3147071/1‑93 (MQ=255)
gCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATg < 2:3733819/93‑1 (MQ=255)
cATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGc > 1:3296887/1‑93 (MQ=255)
aTCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGcc < 2:1016537/93‑1 (MQ=255)
tggccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 2:3973479/3‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 2:4704634/1‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 2:5300451/1‑93 (MQ=255)
cgccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGt < 1:1800091/93‑1 (MQ=255)
cgccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGt < 1:5622496/93‑1 (MQ=255)
ccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgc > 1:4531822/1‑93 (MQ=255)
cgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgca < 2:119930/93‑1 (MQ=255)
gcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgcag > 1:761335/1‑93 (MQ=255)
gcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgcag > 2:2956160/1‑93 (MQ=255)
tATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgcagca > 2:28512/1‑93 (MQ=255)
tATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgcagca < 2:2646173/93‑1 (MQ=255)
tATCGCTGATAAACCCTTCATCACGCAGTGTCAGCAACAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGTCGCGTTGATGCCGTgccgca > 2:1047443/1‑93 (MQ=255)
gCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGga > 1:5166470/1‑93 (MQ=255)
tGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgaga > 2:1401300/1‑93 (MQ=255)
tGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgaga < 2:4271013/93‑1 (MQ=255)
gATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagag > 2:2826029/1‑93 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga > 1:2486079/1‑93 (MQ=255)
tataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGAc > 2:6213005/1‑93 (MQ=255)
tataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGAc > 1:2110510/1‑93 (MQ=255)
ataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACg < 1:1884317/93‑1 (MQ=255)
ataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACg > 2:1613594/1‑93 (MQ=255)
taCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGt < 2:5023391/93‑1 (MQ=255)
cccTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTg > 2:5786302/1‑93 (MQ=255)
ccTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgc > 1:5705560/1‑93 (MQ=255)
cTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgcg > 1:3113353/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgcgc < 2:5850064/93‑1 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgcgc > 2:4338234/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgcgc > 1:3425678/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTgcgc > 2:4552179/1‑93 (MQ=255)
catcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGa > 2:2410334/1‑93 (MQ=255)
catcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGa < 1:5460414/93‑1 (MQ=255)
atcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGAc > 1:931138/1‑93 (MQ=255)
tcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACg < 2:4375939/93‑1 (MQ=255)
tcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACg < 2:4684754/93‑1 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACgg < 1:5578225/93‑1 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACgg < 1:634197/93‑1 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACgg > 2:5942600/1‑93 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACgg < 1:5048689/93‑1 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACgg < 2:2112901/93‑1 (MQ=255)
aCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACggg > 1:2228100/1‑92 (MQ=255)
aCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACggg > 1:115566/1‑92 (MQ=255)
cGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTg > 1:2420224/1‑93 (MQ=255)
gCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGc > 1:1990820/1‑93 (MQ=255)
gtCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGctc > 2:2138508/1‑93 (MQ=255)
gtCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGctc < 2:5199542/93‑1 (MQ=255)
cAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGctctc < 1:3586697/93‑1 (MQ=255)
aCCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGATGCGCGACGGCGCGGCTCTCTTtc > 2:884370/1‑93 (MQ=255)
cAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTtctc < 1:1579926/93‑1 (MQ=255)
agagAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTcc < 2:565328/93‑1 (MQ=255)
agagAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTcc > 2:1138190/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCa < 1:1008625/93‑1 (MQ=255)
gaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCCGc > 1:4771891/1‑93 (MQ=255)
gaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGc > 2:5279478/1‑93 (MQ=255)
gaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGc > 2:3558651/1‑93 (MQ=255)
aaCTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCg > 2:748844/1‑93 (MQ=255)
gAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTAcc < 2:2031476/93‑1 (MQ=255)
aaCGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACcg < 2:2335591/93‑1 (MQ=255)
aaCGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACcg > 2:601974/1‑93 (MQ=255)
|
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCG > NC_000913/4251692‑4251871
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > NC_000913/4251689‑4251875
|
AACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACG > SRR4302533.1198148/1‑94 (MQ=60)
AACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACG > SRR4302533.4849638/1‑94 (MQ=60)
AACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCACTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACG > SRR4302533.4395350/1‑94 (MQ=60)
ACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGC > SRR4302533.3350541/1‑94 (MQ=60)
ACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGC > SRR4302533.28528/1‑94 (MQ=60)
ACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGC > SRR4302533.1804368/1‑94 (MQ=60)
CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCC < SRR4302533.6224269/94‑1 (MQ=60)
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCG < SRR4302533.438216/94‑1 (MQ=60)
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCG > SRR4302533.4572398/1‑94 (MQ=60)
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCG > SRR4302533.5191677/1‑94 (MQ=60)
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCG > SRR4302533.166121/1‑94 (MQ=60)
AAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTT < SRR4302533.2996772/94‑1 (MQ=60)
AAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTT < SRR4302533.555960/94‑1 (MQ=60)
AAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTT > SRR4302533.1189327/1‑94 (MQ=60)
AACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTG < SRR4302533.4189841/94‑1 (MQ=60)
AACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTG < SRR4302533.322710/94‑1 (MQ=60)
ACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGT > SRR4302533.2923959/1‑94 (MQ=60)
ACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGT > SRR4302533.4656483/1‑94 (MQ=60)
ACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGT > SRR4302533.3574099/1‑94 (MQ=60)
TCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTC < SRR4302533.6088057/94‑1 (MQ=60)
CCTTCATCGTTTCAGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTC < SRR4302533.6081301/94‑1 (MQ=60)
CTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCG > SRR4302533.3547208/1‑94 (MQ=60)
CTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCG > SRR4302533.25108/1‑94 (MQ=60)
TTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGA > SRR4302533.1252708/1‑94 (MQ=60)
TTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGA > SRR4302533.4135033/1‑94 (MQ=60)
TCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAA > SRR4302533.5421041/1‑94 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG > SRR4302533.2725569/1‑94 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG > SRR4302533.5778057/1‑94 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG > SRR4302533.450475/1‑94 (MQ=60)
ATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGA > SRR4302533.3639925/1‑94 (MQ=60)
ATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGA > SRR4302533.3169015/1‑94 (MQ=60)
ATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGA > SRR4302533.1616862/1‑94 (MQ=60)
TCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAA < SRR4302533.1393830/94‑1 (MQ=60)
TCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAA > SRR4302533.2992970/1‑94 (MQ=60)
CGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGACC > SRR4302533.1803880/1‑94 (MQ=60)
CGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAAC > SRR4302533.4286643/1‑94 (MQ=60)
CGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAAC < SRR4302533.3528486/94‑1 (MQ=60)
CGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAAC > SRR4302533.3222023/1‑94 (MQ=60)
CGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAAC > SRR4302533.3474428/1‑94 (MQ=60)
GTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACT > SRR4302533.3974090/1‑94 (MQ=60)
TTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTC > SRR4302533.80850/1‑94 (MQ=60)
TTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTC > SRR4302533.4065368/1‑94 (MQ=60)
TTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCC < SRR4302533.1750846/94‑1 (MQ=60)
TTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCC < SRR4302533.3511881/94‑1 (MQ=60)
TCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCG < SRR4302533.3138897/94‑1 (MQ=60)
TCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCG < SRR4302533.2830476/94‑1 (MQ=60)
TCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCG > SRR4302533.6010838/1‑94 (MQ=60)
CTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGG > SRR4302533.3593805/1‑94 (MQ=60)
CTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGG < SRR4302533.3964793/94‑1 (MQ=60)
GCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCG > SRR4302533.6196190/1‑94 (MQ=60)
CGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCG > SRR4302533.3388183/1‑94 (MQ=60)
CGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCG > SRR4302533.1646693/1‑94 (MQ=60)
GGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGT < SRR4302533.2351787/94‑1 (MQ=60)
GTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTT > SRR4302533.2870710/1‑94 (MQ=60)
GTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTT < SRR4302533.2516599/94‑1 (MQ=60)
CGGCATCGCCGCTATCGCTGATATGCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAT < SRR4302533.4950077/94‑1 (MQ=60)
CGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAT < SRR4302533.2801830/94‑1 (MQ=60)
GGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATG > SRR4302533.3166421/1‑94 (MQ=60)
GCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGC > SRR4302533.3317234/1‑94 (MQ=60)
GCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGC > SRR4302533.2790145/1‑94 (MQ=60)
CATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCC > SRR4302533.1815354/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG > SRR4302533.2034768/1‑94 (MQ=60)
CGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTG < SRR4302533.1811044/94‑1 (MQ=60)
CGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTG < SRR4302533.5656479/94‑1 (MQ=60)
GCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGC > SRR4302533.4559263/1‑94 (MQ=60)
CCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCA > SRR4302533.3394059/1‑94 (MQ=60)
CGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAG > SRR4302533.765816/1‑94 (MQ=60)
CGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAG < SRR4302533.999374/94‑1 (MQ=60)
GCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGC > SRR4302533.5563186/1‑94 (MQ=60)
CTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCA < SRR4302533.1059542/94‑1 (MQ=60)
TATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCAC < SRR4302533.3124055/94‑1 (MQ=60)
TATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCAC > SRR4302533.4594512/1‑94 (MQ=60)
CGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCTGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGA > SRR4302533.1203869/1‑94 (MQ=60)
CGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGA > SRR4302533.5197665/1‑94 (MQ=60)
CGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGA > SRR4302533.3027795/1‑94 (MQ=60)
GCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAG < SRR4302533.4849156/94‑1 (MQ=60)
CTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGA > SRR4302533.5643731/1‑94 (MQ=60)
TGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACTCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAG > SRR4302533.2832079/1‑94 (MQ=60)
GATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA > SRR4302533.2501397/1‑94 (MQ=60)
ATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGAC < SRR4302533.5207680/94‑1 (MQ=60)
ATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGAC > SRR4302533.2123526/1‑94 (MQ=60)
ATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGT < SRR4302533.1895825/94‑1 (MQ=60)
TACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTT < SRR4302533.679723/94‑1 (MQ=60)
ACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTG < SRR4302533.1265222/94‑1 (MQ=60)
ACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTG < SRR4302533.3628968/94‑1 (MQ=60)
ACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTG < SRR4302533.2249374/94‑1 (MQ=60)
ACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTG > SRR4302533.324687/1‑94 (MQ=60)
CCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGC > SRR4302533.5740022/1‑94 (MQ=60)
CCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGC > SRR4302533.1712738/1‑94 (MQ=60)
CCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCG > SRR4302533.3132499/1‑94 (MQ=60)
CCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCG < SRR4302533.5665468/94‑1 (MQ=60)
CCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCG < SRR4302533.4427668/94‑1 (MQ=60)
CTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGC > SRR4302533.3446838/1‑94 (MQ=60)
CTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGC > SRR4302533.4739080/1‑94 (MQ=60)
CTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGC < SRR4302533.411789/94‑1 (MQ=60)
CTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGGTGATGCCGTGCAGCACGGAGAGACGTTGCGC > SRR4302533.1771154/1‑94 (MQ=60)
TTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCG < SRR4302533.2103128/94‑1 (MQ=60)
TTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCG < SRR4302533.221686/94‑1 (MQ=60)
CATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGAC < SRR4302533.5493311/94‑1 (MQ=60)
CATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGAC > SRR4302533.936604/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTTGAAGAACTCCGGCGCGCTGATGCCGTGCAGAACGGAGGGACGTTGCGGGACGGT > SRR4302533.5592986/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT > SRR4302533.5026608/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT < SRR4302533.5611937/94‑1 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT > SRR4302533.884193/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT < SRR4302533.5079227/94‑1 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT < SRR4302533.637929/94‑1 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT < SRR4302533.1537906/94‑1 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGG > SRR4302533.116303/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGG > SRR4302533.2241850/1‑94 (MQ=60)
ACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTG < SRR4302533.1442984/94‑1 (MQ=60)
ACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTG > SRR4302533.2435171/1‑94 (MQ=60)
ACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTG > SRR4302533.3597783/1‑94 (MQ=60)
CGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGC > SRR4302533.2003016/1‑94 (MQ=60)
CGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGC > SRR4302533.6063710/1‑94 (MQ=60)
CGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGC < SRR4302533.3788553/94‑1 (MQ=60)
CAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGG > SRR4302533.3463613/1‑94 (MQ=60)
TGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTC < SRR4302533.4791075/94‑1 (MQ=60)
GTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCT > SRR4302533.4024194/1‑94 (MQ=60)
TCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTC > SRR4302533.6238973/1‑94 (MQ=60)
CAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCT < SRR4302533.3608785/94‑1 (MQ=60)
CAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCT > SRR4302533.2453143/1‑94 (MQ=60)
AGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTT < SRR4302533.996495/94‑1 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGNGCGACGGTGCGGCTCNCNTNCT > SRR4302533.2186334/1‑94 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCT < SRR4302533.314213/94‑1 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCT > SRR4302533.1849603/1‑94 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCT > SRR4302533.5612693/1‑94 (MQ=60)
CCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTC < SRR4302533.532595/94‑1 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC > SRR4302533.5423323/1‑94 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC > SRR4302533.1291506/1‑94 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC < SRR4302533.1589444/94‑1 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC > SRR4302533.512467/1‑94 (MQ=60)
GAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAG < SRR4302533.1014525/94‑1 (MQ=60)
AGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCCGC > SRR4302533.4800811/1‑94 (MQ=60)
AGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGC > SRR4302533.5985176/1‑94 (MQ=60)
AGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGC > SRR4302533.5519999/1‑94 (MQ=60)
AACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTttccgcctc > SRR4302533.4364921/1‑85 (MQ=60)
AACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGT > SRR4302533.3957955/1‑94 (MQ=60)
CTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTAC < SRR4302533.2211936/94‑1 (MQ=60)
CTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTAC < SRR4302533.1929049/94‑1 (MQ=60)
GAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCG < SRR4302533.5029280/94‑1 (MQ=60)
GAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCG < SRR4302533.5496020/94‑1 (MQ=60)
ACGCCGCCTTGTCGAAGACCTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCG < SRR4302533.931834/94‑1 (MQ=60)
ACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCG < SRR4302533.5311873/94‑1 (MQ=60)
ACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCG < SRR4302533.3954507/94‑1 (MQ=60)
ACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCG > SRR4302533.3639673/1‑94 (MQ=60)
GCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > SRR4302533.5357749/1‑94 (MQ=60)
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AACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > NC_000913/4251689‑4251875
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
