Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,366,832 |
T→C |
M387V (ATG→GTG) |
yjeH ← |
putative transport |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,366,832 | 0 | T | C | 100.0%
| 663.4
/ NA
| 206 | M387V (ATG→GTG) | yjeH | putative transport |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/97); total (109/97) |
Only 100 of 211 total aligned reads displayed.
TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATA > NC_000913/4366742‑4366921
|
ttATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTg < 1:6175723/93‑1 (MQ=255)
tGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCa < 1:4365625/93‑1 (MQ=255)
tGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCa > 1:3200183/1‑93 (MQ=255)
gCCATTTTCCGGCTTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAg < 2:2149461/93‑1 (MQ=255)
gCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAg < 2:279146/93‑1 (MQ=255)
gCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAg < 1:5619773/93‑1 (MQ=255)
gCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAg < 1:2416067/93‑1 (MQ=255)
ccATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGt > 1:6065723/1‑93 (MQ=255)
cATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTa > 2:598573/1‑93 (MQ=255)
aTTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTaa > 1:981555/1‑93 (MQ=255)
ttttCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAc < 1:4097810/93‑1 (MQ=255)
cGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAc < 2:6054406/93‑1 (MQ=255)
cGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAc > 1:2218812/1‑93 (MQ=255)
ggCTTTTTTGTTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACg < 2:1094527/93‑1 (MQ=255)
ggCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACg > 1:5783851/1‑93 (MQ=255)
cGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCa < 2:2129978/93‑1 (MQ=255)
tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa > 2:2176663/1‑93 (MQ=255)
tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa > 1:373427/1‑93 (MQ=255)
ttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATaa > 2:1021322/1‑93 (MQ=255)
ttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATaa > 2:3546115/1‑93 (MQ=255)
ttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACa > 2:2005871/1‑93 (MQ=255)
ttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACa > 1:541923/1‑93 (MQ=255)
gTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGcc > 2:2628331/1‑93 (MQ=255)
gTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGcc > 2:909493/1‑93 (MQ=255)
gTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGcc < 1:3979874/93‑1 (MQ=255)
ggCAGCACCAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCa < 2:4837492/93‑1 (MQ=255)
ggCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCa < 1:1910070/93‑1 (MQ=255)
gcagcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCaa < 1:1007523/93‑1 (MQ=255)
gcagcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCaa > 1:5094136/1‑93 (MQ=255)
gaagcaACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCaa < 1:4472739/91‑1 (MQ=255)
agcaACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacc < 1:2510742/93‑1 (MQ=255)
agcaACAGCAATAACCGCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacc < 2:641516/93‑1 (MQ=255)
accaACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacc < 2:3756623/91‑1 (MQ=255)
gcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacca > 2:5006536/1‑93 (MQ=255)
gcaACACCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacca < 1:736621/93‑1 (MQ=255)
caACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAaccac < 2:3925308/93‑1 (MQ=255)
aaCAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAaccacc > 2:2213650/1‑93 (MQ=255)
aCAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCg < 2:4547989/93‑1 (MQ=255)
aCAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAaccaccc > 1:4208735/1‑92 (MQ=255)
aCAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCg > 2:1731211/1‑93 (MQ=255)
cacccATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGc < 1:2449147/90‑1 (MQ=255)
gcaaTAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTACCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCa < 2:4484290/90‑1 (MQ=255)
gCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCa > 1:4004747/1‑93 (MQ=255)
cATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagt < 1:6197462/93‑1 (MQ=255)
aTAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagta > 1:5274876/1‑93 (MQ=255)
aTAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagta > 2:62059/1‑93 (MQ=255)
tAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagtag > 2:1473769/1‑93 (MQ=255)
cgcGCCAGCATGATGAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAGCCACCGCCAGTAGTCGa < 2:3865361/91‑1 (MQ=255)
ccGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAt < 1:1867397/93‑1 (MQ=255)
ccGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAt > 2:2733301/1‑93 (MQ=255)
cGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATa < 2:6007337/93‑1 (MQ=255)
gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAtca > 1:2966797/1‑91 (MQ=255)
gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaa < 2:3171115/93‑1 (MQ=255)
gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaa > 1:5561633/1‑93 (MQ=255)
ccAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAc > 1:3357375/1‑93 (MQ=255)
cAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACg > 1:345284/1‑93 (MQ=255)
aGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGt > 2:5530484/1‑93 (MQ=255)
gCATGATCAGCGCATAGAGGCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTc < 1:4796288/93‑1 (MQ=255)
gCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTc > 2:2986711/1‑93 (MQ=255)
gCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTc > 2:4563421/1‑93 (MQ=255)
gCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTc < 1:5662941/93‑1 (MQ=255)
cATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTcc > 1:4570543/1‑93 (MQ=255)
cATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTcc > 1:5887981/1‑93 (MQ=255)
aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt < 1:2888582/93‑1 (MQ=255)
aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt < 1:2644662/93‑1 (MQ=255)
tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt > 1:3220894/1‑93 (MQ=255)
tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt > 2:3462575/1‑93 (MQ=255)
tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt < 2:5620305/93‑1 (MQ=255)
tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt > 2:677823/1‑93 (MQ=255)
gATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTg < 1:3588981/93‑1 (MQ=255)
aGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaat > 1:3643389/1‑93 (MQ=255)
gcgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaata > 2:2346441/1‑93 (MQ=255)
gcgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaata < 1:2670577/93‑1 (MQ=255)
gcgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaata < 1:73298/93‑1 (MQ=255)
gcgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaata > 1:1616922/1‑93 (MQ=255)
cgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaataa > 2:3119476/1‑93 (MQ=255)
cgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaataa < 2:304923/93‑1 (MQ=255)
cgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaataa < 2:1151600/93‑1 (MQ=255)
gcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaataat < 1:3869367/93‑1 (MQ=255)
cATAGAGACTTTTCCAGCCGACCAATGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAAtt < 1:1389027/93‑1 (MQ=255)
tAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTa > 1:4385256/1‑93 (MQ=255)
tAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTa > 2:4337862/1‑93 (MQ=255)
agagACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAc < 2:230000/93‑1 (MQ=255)
agaCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAg > 1:2718072/1‑93 (MQ=255)
ccAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAg < 2:1387878/93‑1 (MQ=255)
ccAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAg > 2:5789137/1‑93 (MQ=255)
ccAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAg < 2:1888529/93‑1 (MQ=255)
cAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgc < 2:2570245/93‑1 (MQ=255)
gccgccCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGTCAGTAGTTGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcat > 2:5484667/1‑93 (MQ=255)
gCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcat > 1:4899952/1‑93 (MQ=255)
gCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcat > 2:540050/1‑93 (MQ=255)
gCCGACCACTGACAGTAACAGAACGCATACCAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcat < 1:1307983/93‑1 (MQ=255)
cGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgc < 2:5854155/93‑1 (MQ=255)
gACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgca < 2:2072405/93‑1 (MQ=255)
gACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgca > 1:4178275/1‑93 (MQ=255)
caCCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgca < 1:5941020/92‑1 (MQ=255)
aCCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgcat > 2:3748951/1‑93 (MQ=255)
ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa < 2:5174443/93‑1 (MQ=255)
ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa < 2:2684053/93‑1 (MQ=255)
ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa > 2:439286/1‑93 (MQ=255)
|
TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATA > NC_000913/4366742‑4366921
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG > NC_000913/4366739‑4366925
|
TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCAC > SRR4302533.2018170/1‑94 (MQ=60)
TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGC < SRR4302533.6212829/94‑1 (MQ=60)
TATGCCATTTTCCGGGGTTTTTCGTTATGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCC < SRR4302533.4488184/94‑1 (MQ=60)
TATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCC < SRR4302533.3756013/94‑1 (MQ=60)
ATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCA > SRR4302533.3219875/1‑94 (MQ=60)
TGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAG < SRR4302533.4391980/94‑1 (MQ=60)
GCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGT > SRR4302533.6102435/1‑94 (MQ=60)
GCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGT < SRR4302533.5653738/94‑1 (MQ=60)
GCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGT < SRR4302533.2430990/94‑1 (MQ=60)
CCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTA < SRR4302533.3774076/94‑1 (MQ=60)
CATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAA > SRR4302533.987308/1‑94 (MQ=60)
ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGCTCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC > SRR4302533.2494336/1‑94 (MQ=60)
TTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACA < SRR4302533.4122753/94‑1 (MQ=60)
CCGGCGTTTTTCTTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC < SRR4302533.2315008/94‑1 (MQ=60)
CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC > SRR4302533.3920158/1‑94 (MQ=60)
CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC > SRR4302533.2232511/1‑94 (MQ=60)
CGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACG > SRR4302533.5818782/1‑94 (MQ=60)
GTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATA > SRR4302533.375683/1‑94 (MQ=60)
TTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAAC > SRR4302533.458550/1‑94 (MQ=60)
TTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACA > SRR4302533.545143/1‑94 (MQ=60)
TTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAG < SRR4302533.4328577/94‑1 (MQ=60)
TTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAG < SRR4302533.327589/94‑1 (MQ=60)
CGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCC > SRR4302533.988494/1‑94 (MQ=60)
GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC < SRR4302533.4004102/94‑1 (MQ=60)
TTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCG < SRR4302533.1264739/94‑1 (MQ=60)
TTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCC > SRR4302533.2678827/1‑94 (MQ=60)
TGGCAGCAACAGCAATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCA < SRR4302533.738498/94‑1 (MQ=60)
GGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAA > SRR4302533.5286378/1‑94 (MQ=60)
GGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAA > SRR4302533.5124907/1‑94 (MQ=60)
GGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAA < SRR4302533.1921723/94‑1 (MQ=60)
GGAAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAA < SRR4302533.3531400/94‑1 (MQ=60)
GCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAAC < SRR4302533.1013417/94‑1 (MQ=60)
GCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAAC < SRR4302533.3227618/94‑1 (MQ=60)
GAAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAAC < SRR4302533.4499792/94‑1 (MQ=60)
AGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCA < SRR4302533.2526215/94‑1 (MQ=60)
AGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCA < SRR4302533.4218171/94‑1 (MQ=60)
GCAACACCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCAC < SRR4302533.740953/94‑1 (MQ=60)
AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCG > SRR4302533.401140/1‑94 (MQ=60)
AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCC > SRR4302533.4234196/1‑94 (MQ=60)
CACCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCC < SRR4302533.2464263/94‑1 (MQ=60)
AGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCA > SRR4302533.5347333/1‑94 (MQ=60)
AGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCA > SRR4302533.4029125/1‑94 (MQ=60)
CCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGT > SRR4302533.1544728/1‑94 (MQ=60)
CATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA > SRR4302533.5306505/1‑94 (MQ=60)
CATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA < SRR4302533.6234642/94‑1 (MQ=60)
ATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGAATAACAGCCCGCCAACCACCGCCAGTAG > SRR4302533.5530354/1‑94 (MQ=60)
TAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGT > SRR4302533.2700501/1‑94 (MQ=60)
AAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGT < SRR4302533.4392374/94‑1 (MQ=60)
ACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCG > SRR4302533.4116871/1‑94 (MQ=60)
CCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAT > SRR4302533.6221965/1‑94 (MQ=60)
CCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAT > SRR4302533.1344330/1‑94 (MQ=60)
CCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATA < SRR4302533.1878782/94‑1 (MQ=60)
CGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATCA > SRR4302533.2984933/1‑94 (MQ=60)
CGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAA > SRR4302533.5595241/1‑94 (MQ=60)
GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC > SRR4302533.3378123/1‑94 (MQ=60)
GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC > SRR4302533.722035/1‑94 (MQ=60)
GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC < SRR4302533.3594196/94‑1 (MQ=60)
CCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACG > SRR4302533.4921074/1‑94 (MQ=60)
CCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACG > SRR4302533.347395/1‑94 (MQ=60)
GCATGATCAGCGCATAGAGGCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCC < SRR4302533.4825341/94‑1 (MQ=60)
GCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCC < SRR4302533.5697154/94‑1 (MQ=60)
GCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCC > SRR4302533.4598244/1‑94 (MQ=60)
GCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCC > SRR4302533.5923553/1‑94 (MQ=60)
CATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTACT > SRR4302533.2436437/1‑94 (MQ=60)
ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCTCCAACCACCGCCAGTAGTCGATAACGTCCTT > SRR4302533.1641649/1‑94 (MQ=60)
ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT < SRR4302533.4255171/94‑1 (MQ=60)
ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT < SRR4302533.2906339/94‑1 (MQ=60)
ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT > SRR4302533.3240755/1‑94 (MQ=60)
ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT < SRR4302533.2660913/94‑1 (MQ=60)
TGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTG > SRR4302533.3063940/1‑94 (MQ=60)
GATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGC < SRR4302533.3611079/94‑1 (MQ=60)
GATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGC > SRR4302533.6032327/1‑94 (MQ=60)
CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT > SRR4302533.2970415/1‑94 (MQ=60)
CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT > SRR4302533.3665790/1‑94 (MQ=60)
CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT < SRR4302533.4125985/94‑1 (MQ=60)
AGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATA > SRR4302533.1626721/1‑94 (MQ=60)
AGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATA < SRR4302533.2045925/94‑1 (MQ=60)
GCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAA < SRR4302533.5943955/94‑1 (MQ=60)
GCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAA < SRR4302533.2686956/94‑1 (MQ=60)
GCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAA < SRR4302533.73768/94‑1 (MQ=60)
CGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAAT > SRR4302533.6297640/1‑94 (MQ=60)
GCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATT < SRR4302533.3892989/94‑1 (MQ=60)
CATAGAGACTTTTCCAGCCGACCAATGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTT < SRR4302533.1397393/94‑1 (MQ=60)
ATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTA > SRR4302533.3621197/1‑94 (MQ=60)
ATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTA > SRR4302533.4411734/1‑94 (MQ=60)
TAGAAACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAC < SRR4302533.1913937/94‑1 (MQ=60)
AGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA > SRR4302533.787233/1‑94 (MQ=60)
GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG > SRR4302533.2734760/1‑94 (MQ=60)
GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG > SRR4302533.5676851/1‑94 (MQ=60)
GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG < SRR4302533.5868883/94‑1 (MQ=60)
ACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCT > SRR4302533.4730462/1‑94 (MQ=60)
ACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCT < SRR4302533.5582678/94‑1 (MQ=60)
CTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTG < SRR4302533.5083276/94‑1 (MQ=60)
TTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCC > SRR4302533.5597690/1‑94 (MQ=60)
AGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACTACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCAT > SRR4302533.3400965/1‑94 (MQ=60)
AGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCAT > SRR4302533.2869220/1‑94 (MQ=60)
AGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCAT > SRR4302533.4929641/1‑94 (MQ=60)
GCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATG < SRR4302533.2532489/94‑1 (MQ=60)
GCCGACCACTGACAGTAACAGAACGCATACCAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATG < SRR4302533.1315837/94‑1 (MQ=60)
CCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGC < SRR4302533.2586446/94‑1 (MQ=60)
CGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCA < SRR4302533.6130692/94‑1 (MQ=60)
CGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCA > SRR4302533.4203587/1‑94 (MQ=60)
GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT < SRR4302533.5759481/94‑1 (MQ=60)
CACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT < SRR4302533.5976947/94‑1 (MQ=60)
ACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACA > SRR4302533.3728970/1‑94 (MQ=60)
ACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACA > SRR4302533.1614255/1‑94 (MQ=60)
ACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACA < SRR4302533.1681639/94‑1 (MQ=60)
CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG > SRR4302533.5400703/1‑94 (MQ=60)
CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG < SRR4302533.1834613/94‑1 (MQ=60)
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TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG > NC_000913/4366739‑4366925
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
