Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	342,435	A→G	M110V (ATG→GTG)	yahK →	putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	342,435	0	A	G	99.1%	1175.5 / ‑2.4	340	M110V (ATG→GTG)	yahK	putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base A (3/0); new base G (174/162); total (177/163)
Fisher's exact test for biased strand distribution p-value = 2.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

Only 100 of 358 total aligned reads displayed.

GCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG  >  NC_000913/342344‑342525

gcCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTg                                                                                          <  2:9121735/94‑1 (MQ=255)

 ccGGGCGATCTGGTCGGTCTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGa                                                                                         >  1:1528430/1‑94 (MQ=255)

  cGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAc                                                                                        >  1:8141494/1‑94 (MQ=255)

   gggCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAcc                                                                                       <  2:10132762/94‑1 (MQ=255)

   gggCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAcc                                                                                       >  2:5671125/1‑94 (MQ=255)

   gggCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAcc                                                                                       <  1:6847595/94‑1 (MQ=255)

    ggCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCg                                                                                      >  2:5116321/1‑94 (MQ=255)

     gctaTCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGTGTTGGAAAACTACTGTGATCACGTGACCgg                                                                                     <  1:107229/91‑1 (MQ=255)

      cGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGc                                                                                    <  1:3270959/94‑1 (MQ=255)

      cGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAACGGc                                                                                    >  2:4133679/1‑94 (MQ=255)

       gATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCa                                                                                   >  1:7645627/1‑94 (MQ=255)

       gATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCa                                                                                   <  1:1223409/94‑1 (MQ=255)

       gATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCa                                                                                   >  2:8086070/1‑94 (MQ=255)

        aTCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAc                                                                                  <  2:1002264/94‑1 (MQ=255)

         tCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAcc                                                                                 >  2:2647581/1‑94 (MQ=255)

         tCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAcc                                                                                 >  1:5338329/1‑94 (MQ=255)

          cTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCt                                                                                <  2:9340790/94‑1 (MQ=255)

          cTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCt                                                                                >  1:4048171/1‑94 (MQ=255)

          cTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCt                                                                                >  2:4064600/1‑94 (MQ=255)

            ggTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCtat                                                                              <  2:1990143/94‑1 (MQ=255)

               cGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAc                                                                           >  2:2308519/1‑94 (MQ=255)

               cGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAc                                                                           >  1:2719579/1‑94 (MQ=255)

               cGGTGTCGGCTGCACTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATTACGTGACCGGCACCTATAAc                                                                           <  2:312272/94‑1 (MQ=255)

                ggTGTCGTCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACt                                                                          <  2:9851024/94‑1 (MQ=255)

                  tgtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCg                                                                        >  1:8707034/1‑94 (MQ=255)

                    tCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGcc                                                                      <  2:1362882/94‑1 (MQ=255)

                    tCGGATGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAACCTACTGTGATCACGTGACCGGCCCCTATAACCCGcc                                                                      <  1:1466629/94‑1 (MQ=255)

                      ggCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGa                                                                    >  2:328455/1‑94 (MQ=255)

                      ggCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGCAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGa                                                                    >  1:8653946/1‑94 (MQ=255)

                        cTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACg                                                                  >  1:9021052/1‑94 (MQ=255)

                         tGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGc                                                                 >  2:6470482/1‑94 (MQ=255)

                          gCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGcc                                                                >  1:281316/1‑94 (MQ=255)

                           cATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATACCTCGCCGACGCCg                                                               >  1:529571/1‑94 (MQ=255)

                           cATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCg                                                               >  2:8363389/1‑94 (MQ=255)

                           cATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCg                                                               <  1:9117308/94‑1 (MQ=255)

                            aTTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCgg                                                              >  1:10490449/1‑94 (MQ=255)

                              tGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAc                                                            <  1:9586116/94‑1 (MQ=255)

                              tGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAc                                                            <  1:1534744/94‑1 (MQ=255)

                              tGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAc                                                            <  2:4852662/94‑1 (MQ=255)

                              tGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAc                                                            >  2:4257395/1‑94 (MQ=255)

                               gTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACg                                                           >  1:7285712/1‑94 (MQ=255)

                               gTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACg                                                           >  2:467064/1‑94 (MQ=255)

                               gTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACg                                                           >  2:7905076/1‑94 (MQ=255)

                                tCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGa                                                          >  1:47880/1‑94 (MQ=255)

                                 cGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGaa                                                         >  1:4681490/1‑94 (MQ=255)

                                  gACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAc                                                        >  1:10425463/1‑94 (MQ=255)

                                   aCAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAcc                                                       <  1:9677890/94‑1 (MQ=255)

                                    cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGCCGAAcgg                                                      >  2:3412282/1‑92 (MQ=255)

                                    cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCg                                                      >  1:3743508/1‑94 (MQ=255)

                                    cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCg                                                      >  1:9478964/1‑94 (MQ=255)

                                    cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCg                                                      <  2:759868/94‑1 (MQ=255)

                                    cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCg                                                      <  1:7505703/94‑1 (MQ=255)

                                     aGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACAGGCACCTATAACTCGCCGACGCCGGACGAACCgg                                                     >  2:8764600/1‑94 (MQ=255)

                                      gTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCggg                                                    <  1:10333395/94‑1 (MQ=255)

                                       tgggaaaCATGGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGGGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCCGGc                                                   >  1:9385161/5‑94 (MQ=255)

                                        tGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGcc                                                  >  1:6977508/1‑94 (MQ=255)

                                          tAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCAt                                                <  2:3563706/94‑1 (MQ=255)

                                          tAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCAt                                                >  1:7741601/1‑94 (MQ=255)

                                           aaaCATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATa                                               >  1:3917338/1‑94 (MQ=255)

                                            aaCATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAc                                              <  1:10117481/94‑1 (MQ=255)

                                             aCATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGGTCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAct                                             >  2:8543280/1‑94 (MQ=255)

                                               aTTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATActct                                           <  1:565079/94‑1 (MQ=255)

                                                ttGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTg                                          <  1:6458783/94‑1 (MQ=255)

                                                ttGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTg                                          <  2:7227004/94‑1 (MQ=255)

                                                ttGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTg                                          <  2:7137578/94‑1 (MQ=255)

                                                ttGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTg                                          >  2:10409244/1‑94 (MQ=255)

                                                  gCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTggg                                        >  1:435195/1‑94 (MQ=255)

                                                     aaGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcgg                                     <  2:3783585/94‑1 (MQ=255)

                                                     aaGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcgg                                     <  2:7008878/94‑1 (MQ=255)

                                                       gagTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCt                                   <  2:1091105/94‑1 (MQ=255)

                                                        agTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTa                                  >  1:5957143/1‑94 (MQ=255)

                                                        agTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTa                                  <  2:2756960/94‑1 (MQ=255)

                                                          tgtgAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCAGGCCATACTCTGGGCGGCTACt                                >  2:1937173/1‑94 (MQ=255)

                                                            tgAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACATATACCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTca                              <  2:6383810/94‑1 (MQ=255)

                                                             gAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTcac                             <  1:2584443/94‑1 (MQ=255)

                                                              aaGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTcaca                            >  1:7113521/1‑94 (MQ=255)

                                                                 aCGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaaca                         >  1:4240598/1‑94 (MQ=255)

                                                                 aCGGGTTGGAAAACTACTGTGATCACGGGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacacca                         >  1:3435628/1‑94 (MQ=255)

                                                                   gggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGa                       <  2:1646810/94‑1 (MQ=255)

                                                                   gggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACGCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGa                       <  2:2990521/94‑1 (MQ=255)

                                                                    ggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAt                      <  2:4502582/94‑1 (MQ=255)

                                                                    ggTTGGAAAACTACTGTGATCACGCGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAt                      >  2:4737809/1‑94 (MQ=255)

                                                                     gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtc                     <  2:1796126/94‑1 (MQ=255)

                                                                     gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtc                     <  2:4016149/94‑1 (MQ=255)

                                                                     gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtc                     <  1:8507248/94‑1 (MQ=255)

                                                                     gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtc                     <  2:884389/94‑1 (MQ=255)

                                                                        ggAAAACTACTGTGATCACTTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtcgtc                  <  1:6207537/94‑1 (MQ=255)

                                                                          aaaaCTACTGTGATCACGTGACCGGCACCTATAACTCACCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATcgtcgt                >  2:6092941/1‑94 (MQ=255)

                                                                           aaaCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGtt               <  2:588696/94‑1 (MQ=255)

                                                                           aaaCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGtt               >  1:8930947/1‑94 (MQ=255)

                                                                               tactGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATg           <  2:8232517/94‑1 (MQ=255)

                                                                               tactGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATg           >  2:956228/1‑94 (MQ=255)

                                                                                 ctGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAg         >  1:1927834/1‑94 (MQ=255)

                                                                                 ctGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAg         <  1:2153814/94‑1 (MQ=255)

                                                                                    tgATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGa      >  2:6614473/1‑94 (MQ=255)

                                                                                     gATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGat     >  2:817373/1‑94 (MQ=255)

                                                                                     gATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGat     <  1:66704/94‑1 (MQ=255)

                                                                                      aTCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGata    >  1:7477069/1‑94 (MQ=255)

                                                                                        cacgTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATg  >  1:8399614/1‑94 (MQ=255)

                                                                                        cacgTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATg  <  2:2137778/94‑1 (MQ=255)

GCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG  >  NC_000913/342344‑342525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC  >  NC_000913/342342‑342528

GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACG                                                                                               <  SRR4302545.2070394/94‑1 (MQ=60)

 CGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGGAGACGGGTTGGAAAACTACTGTGATCACGT                                                                                              <  SRR4302545.7149520/94‑1 (MQ=60)

 CGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGT                                                                                              <  SRR4302545.7149234/94‑1 (MQ=60)

 CGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGT                                                                                              >  SRR4302545.909916/1‑94 (MQ=60)

  GCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTG                                                                                             >  SRR4302545.3674203/1‑94 (MQ=60)

  GCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTG                                                                                             >  SRR4302545.1191594/1‑94 (MQ=60)

   CCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGA                                                                                            >  SRR4302545.1564159/1‑94 (MQ=60)

   CCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGA                                                                                            <  SRR4302545.7553828/94‑1 (MQ=60)

   CCGGGCGATCTGGTCGGTCTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGA                                                                                            >  SRR4302545.1564158/1‑94 (MQ=60)

    CGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAC                                                                                           >  SRR4302545.8376698/1‑94 (MQ=60)

    CGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAC                                                                                           >  SRR4302545.9956288/1‑94 (MQ=60)

    CGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGAC                                                                                           >  SRR4302545.5603123/1‑94 (MQ=60)

     GGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACC                                                                                          <  SRR4302545.7035670/94‑1 (MQ=60)

     GGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACC                                                                                          <  SRR4302545.8929389/94‑1 (MQ=60)

     GGGCGATCTGGGCGTTGTCGGCTGCATTGTAGACAGTTGTAAACATTGCGAAGAGTGTGAAGGCGGGTTGGAAAACTGCTGTGATCTCGTGACC                                                                                          <  SRR4302545.2838773/94‑1 (MQ=60)

       GCTATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGTGTTGGAAAACTACTGTGATCACGTGACCGG                                                                                        <  SRR4302545.109683/94‑1 (MQ=60)

       GCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGG                                                                                        <  SRR4302545.6333125/94‑1 (MQ=60)

        GGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC                                                                                       <  SRR4302545.6888176/94‑1 (MQ=60)

        CGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC                                                                                       >  SRR4302545.5233664/1‑94 (MQ=60)

        CGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC                                                                                       <  SRR4302545.3351140/94‑1 (MQ=60)

        CGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC                                                                                       >  SRR4302545.9084265/1‑94 (MQ=60)

        CGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC                                                                                       >  SRR4302545.5233663/1‑94 (MQ=60)

         GATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCA                                                                                      >  SRR4302545.7861980/1‑94 (MQ=60)

         GATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCA                                                                                      <  SRR4302545.1251142/94‑1 (MQ=60)

         GATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCA                                                                                      >  SRR4302545.5460296/1‑94 (MQ=60)

           TCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACC                                                                                    >  SRR4302545.7098192/1‑94 (MQ=60)

           TCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACC                                                                                    >  SRR4302545.5476933/1‑94 (MQ=60)

           TCTGATTGGTCTCGGCTGCATTGTCGACGGTTGTCATCCTTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACAGGCACC                                                                                    >  SRR4302545.7098193/1‑94 (MQ=60)

            CTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCT                                                                                   <  SRR4302545.3195133/94‑1 (MQ=60)

            CTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCT                                                                                   >  SRR4302545.4149526/1‑94 (MQ=60)

            CTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCT                                                                                   >  SRR4302545.5829678/1‑94 (MQ=60)

            CTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCT                                                                                   <  SRR4302545.10692393/94‑1 (MQ=60)

             TGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTA                                                                                  <  SRR4302545.8932110/94‑1 (MQ=60)

             TGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTA                                                                                  >  SRR4302545.5540957/1‑94 (MQ=60)

               GTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATA                                                                                <  SRR4302545.3462114/94‑1 (MQ=60)

               GTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATAACGTGACCGGCACCTATA                                                                                >  SRR4302545.1032127/1‑94 (MQ=60)

                TCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAA                                                                               <  SRR4302545.2735053/94‑1 (MQ=60)

                 CGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAC                                                                              >  SRR4302545.2785157/1‑94 (MQ=60)

                  GGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACT                                                                             >  SRR4302545.6043460/1‑94 (MQ=60)

                  GGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACT                                                                             >  SRR4302545.7021500/1‑94 (MQ=60)

                    TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG                                                                           >  SRR4302545.8959625/1‑94 (MQ=60)

                    TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG                                                                           >  SRR4302545.8959626/1‑94 (MQ=60)

                     GTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATTACGTGACCGGCACCTATAAATCGC                                                                          >  SRR4302545.8282512/1‑94 (MQ=60)

                      TCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCC                                                                         <  SRR4302545.7705966/94‑1 (MQ=60)

                      TCGGCGGCAGTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCC                                                                         <  SRR4302545.2886298/94‑1 (MQ=60)

                      TCGGATGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAACCTACTGTGATCACGTGACCGGCCCCTATAACCCGCC                                                                         <  SRR4302545.1500249/94‑1 (MQ=60)

                       CGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCG                                                                        >  SRR4302545.2190824/1‑94 (MQ=60)

                        GGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGCAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGA                                                                       >  SRR4302545.8904980/1‑94 (MQ=60)

                          CTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACG                                                                     >  SRR4302545.4365885/1‑94 (MQ=60)

                          CTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACG                                                                     <  SRR4302545.1957451/94‑1 (MQ=60)

                          CTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACG                                                                     >  SRR4302545.9283804/1‑94 (MQ=60)

                            GCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCC                                                                   >  SRR4302545.287183/1‑94 (MQ=60)

                             CATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATACCTCGCCGACGCCG                                                                  >  SRR4302545.541394/1‑94 (MQ=60)

                             CATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCG                                                                  >  SRR4302545.10010327/1‑94 (MQ=60)

                             CATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCG                                                                  >  SRR4302545.541395/1‑94 (MQ=60)

                             CATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCG                                                                  <  SRR4302545.9384825/94‑1 (MQ=60)

                              ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG                                                                 <  SRR4302545.279489/94‑1 (MQ=60)

                              ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG                                                                 >  SRR4302545.10799687/1‑94 (MQ=60)

                              ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG                                                                 <  SRR4302545.1121661/94‑1 (MQ=60)

                                TGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAC                                                               <  SRR4302545.9868625/94‑1 (MQ=60)

                                TGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAC                                                               <  SRR4302545.1570664/94‑1 (MQ=60)

                                TGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAC                                                               <  SRR4302545.1570663/94‑1 (MQ=60)

                                TGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAC                                                               >  SRR4302545.8709105/1‑94 (MQ=60)

                                 GTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACG                                                              >  SRR4302545.7192321/1‑94 (MQ=60)

                                 GTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACG                                                              >  SRR4302545.1559105/1‑94 (MQ=60)

                                 GTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACG                                                              <  SRR4302545.7755647/94‑1 (MQ=60)

                                 GTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACG                                                              >  SRR4302545.7490047/1‑94 (MQ=60)

                                  TCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGA                                                             >  SRR4302545.48982/1‑94 (MQ=60)

                                  TCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGGTGGAAAACTACTGAGAGCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGA                                                             >  SRR4302545.9668183/1‑94 (MQ=60)

                                   CGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAA                                                            >  SRR4302545.4800886/1‑94 (MQ=60)

                                    GACAGTTGTAAACATTGCGAAGAGTGTGAAGGCGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAC                                                           <  SRR4302545.9429208/94‑1 (MQ=60)

                                    GACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAC                                                           >  SRR4302545.8364201/1‑94 (MQ=60)

                                    GACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAC                                                           >  SRR4302545.10732762/1‑94 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACC                                                          <  SRR4302545.641640/94‑1 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACC                                                          <  SRR4302545.7897987/94‑1 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACC                                                          <  SRR4302545.767433/94‑1 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACC                                                          <  SRR4302545.9965128/94‑1 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACC                                                          >  SRR4302545.1926316/1‑94 (MQ=60)

                                     ACAGTTGTAAACATTGCGAAGAGCGTGAAGACGGGTTGGAAACCTCATAAGAGCACTTGACCGGCACCTATAACTCGCCCACGCCGGAAGAACG                                                          >  SRR4302545.5524445/1‑94 (MQ=40)

                                      CAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCG                                                         >  SRR4302545.3368510/1‑94 (MQ=60)

                                      CAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCG                                                         <  SRR4302545.7718079/94‑1 (MQ=60)

                                      CAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCG                                                         >  SRR4302545.3835652/1‑94 (MQ=60)

                                      CAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCG                                                         >  SRR4302545.9757852/1‑94 (MQ=60)

                                       AGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACTTATAACTCGCCGACGCCGGACGAACCGG                                                        <  SRR4302545.8404501/94‑1 (MQ=60)

                                       AGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGG                                                        <  SRR4302545.10818595/94‑1 (MQ=60)

                                        GTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGG                                                       <  SRR4302545.10638039/94‑1 (MQ=60)

                                         tgggAAACATGGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGGGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCCGGC                                                      >  SRR4302545.9660606/5‑94 (MQ=60)

                                         TTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGC                                                      >  SRR4302545.76734/1‑94 (MQ=60)

                                         TTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGC                                                      <  SRR4302545.10833659/94‑1 (MQ=60)

                                         TTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGC                                                      <  SRR4302545.4838743/94‑1 (MQ=60)

                                         TTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCAGGC                                                      >  SRR4302545.4156863/1‑94 (MQ=60)

                                         TTGTAAACAATGCGAAGAGTGTGAAGACGGGTTGGAAAACGACTGGTATCACGAGACCGGCACCGATATCTCGCCGACGCCTGACGAACCGGGC                                                      >  SRR4302545.9660607/1‑94 (MQ=53)

                                          TGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCC                                                     >  SRR4302545.7169923/1‑94 (MQ=60)

                                          TGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCC                                                     >  SRR4302545.10729466/1‑94 (MQ=60)

                                          TGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCC                                                     <  SRR4302545.152572/94‑1 (MQ=60)

                                            TAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCAT                                                   >  SRR4302545.7960701/1‑94 (MQ=60)

                                             AAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATA                                                  >  SRR4302545.4015121/1‑94 (MQ=60)

                                             AAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGCGCCATA                                                  >  SRR4302545.7846153/1‑94 (MQ=60)

                                              AACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAC                                                 <  SRR4302545.10416707/94‑1 (MQ=60)

                                                CTTTGCGAAGAGTGTGAAGACGGGTTGGAAACCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGACCATACTC                                               >  SRR4302545.10647769/1‑94 (MQ=60)

                                                CATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTC                                               <  SRR4302545.9900158/94‑1 (MQ=60)

                                                 ATTGCGAAGAGTGTGAAGACGGTTTGGAAAGCTACTGTGATCACGTGACCGGCACCTATAACGCGCCGACGCCGGACGAACCGGGCCATACTCT                                              <  SRR4302545.6177095/94‑1 (MQ=60)

                                                 ATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCT                                              <  SRR4302545.5063039/94‑1 (MQ=60)

                                                 ATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCT                                              <  SRR4302545.577779/94‑1 (MQ=60)

                                                  TTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTG                                             <  SRR4302545.6635368/94‑1 (MQ=60)

                                                  TTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTG                                             <  SRR4302545.787967/94‑1 (MQ=60)

                                                   TGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGG                                            <  SRR4302545.7182953/94‑1 (MQ=60)

                                                    GCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGG                                           >  SRR4302545.444866/1‑94 (MQ=60)

                                                     CGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGG                                          >  SRR4302545.9201037/1‑94 (MQ=60)

                                                     CGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGC                                          >  SRR4302545.9201035/1‑94 (MQ=60)

                                                     CGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCAATACTCTGGGC                                          >  SRR4302545.9201038/1‑94 (MQ=60)

                                                      GAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCG                                         >  SRR4302545.4130484/1‑94 (MQ=60)

                                                      GAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCG                                         >  SRR4302545.9791333/1‑94 (MQ=60)

                                                      GAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCG                                         <  SRR4302545.641735/94‑1 (MQ=60)

                                                       AAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGATGAACCGGGCCATACTCTGGGCGG                                        <  SRR4302545.2964437/94‑1 (MQ=60)

                                                       AAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGG                                        >  SRR4302545.8067690/1‑94 (MQ=60)

                                                         GAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCT                                      >  SRR4302545.9620648/1‑94 (MQ=60)

                                                         GAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCT                                      <  SRR4302545.4397010/94‑1 (MQ=60)

                                                         GAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCT                                      >  SRR4302545.7321026/1‑94 (MQ=60)

                                                         GAGTGGGAAGCCGGGTTCGAAAACTCCTGTGCTCACGTGCCCGGCACATATAACTCGCCGACGCCGGAGGAACCGGGCCATCCTCTGGGCGGAT                                      <  SRR4302545.2796097/94‑1 (MQ=38)

                                                          AGTGTGAAGACGGGTTGGAAAACTACTGTGATCGCGTGGCCGGCACCTATAACTCGCCGACGCCGGACGATCCGGGCCATACTCTGGGCGGCTA                                     <  SRR4302545.6512645/94‑1 (MQ=60)

                                                          AGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTA                                     >  SRR4302545.6117857/1‑94 (MQ=60)

                                                           GTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTAC                                    <  SRR4302545.10778500/94‑1 (MQ=60)

                                                            TGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACT                                   >  SRR4302545.4239463/1‑94 (MQ=60)

                                                            TGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACT                                   <  SRR4302545.266060/94‑1 (MQ=60)

                                                               GAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCAC                                <  SRR4302545.2646666/94‑1 (MQ=60)

                                                                AAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACA                               >  SRR4302545.7310650/1‑94 (MQ=60)

                                                                AAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACA                               <  SRR4302545.6948169/94‑1 (MQ=60)

                                                                AAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACA                               >  SRR4302545.8664266/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAATCTATTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGTCGAACCGGGTCATATTCTTGGTGGCTACTTACAA                              >  SRR4302545.9663801/1‑94 (MQ=53)

                                                                 AGACGGGTTGGAAAACTACTGTGATCCCGTGACCGGCGCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              <  SRR4302545.1438470/94‑1 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              <  SRR4302545.2639358/94‑1 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              >  SRR4302545.9142808/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              >  SRR4302545.6736902/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              >  SRR4302545.7880470/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              >  SRR4302545.4148833/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              >  SRR4302545.1672385/1‑94 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              <  SRR4302545.4283399/94‑1 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAA                              <  SRR4302545.8699798/94‑1 (MQ=60)

                                                                 AGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGACGACGCCGGACGAACCGGGCCATACTCCCGGCGGCTACTCACAC                              >  SRR4302545.3991078/1‑94 (MQ=60)

                                                                   ACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACA                            >  SRR4302545.4346712/1‑94 (MQ=60)

                                                                   ACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACA                            >  SRR4302545.3519614/1‑94 (MQ=60)

                                                                   ACGGGTTGGAAAACTACTGTGATCACGGGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACACCA                            >  SRR4302545.3519613/1‑94 (MQ=60)

                                                                    CGGGTTGGAAAACTACTGTGATCACGTGACCGGCGCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAG                           <  SRR4302545.1036385/94‑1 (MQ=60)

                                                                    CGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAG                           >  SRR4302545.5785723/1‑94 (MQ=60)

                                                                     GGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGA                          <  SRR4302545.10536505/94‑1 (MQ=60)

                                                                     GGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGA                          <  SRR4302545.7966466/94‑1 (MQ=60)

                                                                      GGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAT                         <  SRR4302545.2415532/94‑1 (MQ=60)

                                                                      GGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAT                         <  SRR4302545.6266203/94‑1 (MQ=60)

                                                                       GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC                        <  SRR4302545.8753058/94‑1 (MQ=60)

                                                                       GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC                        <  SRR4302545.4005786/94‑1 (MQ=60)

                                                                       GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC                        <  SRR4302545.4744163/94‑1 (MQ=60)

                                                                        TTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCG                       <  SRR4302545.2234210/94‑1 (MQ=60)

                                                                        GTGGAAAACTACTGTGATCGGGTGACCGGCAGCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCG                       <  SRR4302545.7169518/94‑1 (MQ=60)

                                                                         TGGAAAACTGCTGTTATCACGTGACCGGCACCTATAACGCTCCAACGCCGGACGAACCGGGCCATACGCTGGGCGGCTACTCACAACAGATCGT                      <  SRR4302545.9325787/94‑1 (MQ=60)

                                                                         TGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGT                      <  SRR4302545.9325786/94‑1 (MQ=60)

                                                                         TGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGT                      >  SRR4302545.7634985/1‑94 (MQ=60)

                                                                         TGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGT                      >  SRR4302545.9810112/1‑94 (MQ=60)

                                                                          GGAAACCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTC                     <  SRR4302545.1275698/94‑1 (MQ=60)

                                                                          GGAAAACTACTGTGATCACTTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTC                     <  SRR4302545.6376489/94‑1 (MQ=60)

                                                                          GGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTC                     <  SRR4302545.4775774/94‑1 (MQ=60)

                                                                            AAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGT                   >  SRR4302545.6085703/1‑94 (MQ=60)

                                                                            AAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGT                   >  SRR4302545.3689293/1‑94 (MQ=60)

                                                                             AAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTT                  <  SRR4302545.1547447/94‑1 (MQ=60)

                                                                             AAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTT                  >  SRR4302545.9190633/1‑94 (MQ=60)

                                                                             AAACTACTGTGATCACGGGACCGGCACCTATAACTCGCCGACGCCGGACGACCCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTT                  <  SRR4302545.9225228/94‑1 (MQ=60)

                                                                              AACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTC                 <  SRR4302545.4093240/94‑1 (MQ=60)

                                                                               ACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCA                <  SRR4302545.738352/94‑1 (MQ=60)

                                                                                CTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCAT               >  SRR4302545.3950431/1‑94 (MQ=60)

                                                                                CTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCAT               <  SRR4302545.2838564/94‑1 (MQ=60)

                                                                                CTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGCCCATACTCCGGGCGGCTACTCACAACAGATCGTCGTTCAT               <  SRR4302545.4857997/94‑1 (MQ=60)

                                                                                 TACTGTGATCCGGTGCCCGGCCCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATG              <  SRR4302545.8836124/94‑1 (MQ=60)

                                                                                 TACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATG              <  SRR4302545.6675971/94‑1 (MQ=60)

                                                                                 TACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATG              >  SRR4302545.8377652/1‑94 (MQ=60)

                                                                                  ACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGA             >  SRR4302545.4905408/1‑94 (MQ=60)

                                                                                  ACTGTGATCACGTGACCGCCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGA             <  SRR4302545.10934201/94‑1 (MQ=60)

                                                                                   CTGTGATCACGTGACCGGCGCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG            >  SRR4302545.7234308/1‑94 (MQ=60)

                                                                                   CTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG            >  SRR4302545.1459001/1‑94 (MQ=60)

                                                                                   CTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG            >  SRR4302545.1975555/1‑94 (MQ=60)

                                                                                   CTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG            <  SRR4302545.2206496/94‑1 (MQ=60)

                                                                                       GATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGAT        <  SRR4302545.68191/94‑1 (MQ=60)

                                                                                       GATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGAT        >  SRR4302545.9882988/1‑94 (MQ=60)

                                                                                       GATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGAT        >  SRR4302545.204537/1‑94 (MQ=60)

                                                                                       GATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGCGCGGCTACTCACAACAGATCGTCGTTCATGAGCGAT        <  SRR4302545.10796598/94‑1 (MQ=60)

                                                                                        ATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATA       >  SRR4302545.8871949/1‑94 (MQ=60)

                                                                                        ATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATA       >  SRR4302545.7688710/1‑94 (MQ=60)

                                                                                         TCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATAT      <  SRR4302545.447205/94‑1 (MQ=60)

                                                                                         TCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGATCATGAGCGATAT      >  SRR4302545.6623723/1‑94 (MQ=60)

                                                                                          CACGTGACCGGCCCCTATAACTCGCCGCCGCCGGCCGAACCGGGCCATACTCTGGCCGGCTACTCACAACAGATCGTCGTTCATcacagatatg     >  SRR4302545.7396664/1‑84 (MQ=60)

                                                                                          CACGTGACCGGCACCTATAACTCGGCGACGCCGGACGAAGCGGGCCAGACTCTGGGCGGTTACTCACAACAGATCGTCGTTCATGAGCGATATG     >  SRR4302545.3340519/1‑94 (MQ=60)

                                                                                          CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG     >  SRR4302545.7396665/1‑94 (MQ=60)

                                                                                          CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG     >  SRR4302545.10168968/1‑94 (MQ=60)

                                                                                          CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG     >  SRR4302545.8642694/1‑94 (MQ=60)

                                                                                          CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG     <  SRR4302545.9384475/94‑1 (MQ=60)

                                                                                           ACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGT    >  SRR4302545.4199111/1‑94 (MQ=60)

                                                                                           ACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGT    <  SRR4302545.6456434/94‑1 (MQ=60)

                                                                                           ACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGT    <  SRR4302545.3780491/94‑1 (MQ=60)

                                                                                            CGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTT   >  SRR4302545.8636982/1‑94 (MQ=60)

                                                                                             GTGACCGGCATCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC  <  SRR4302545.10343564/94‑1 (MQ=60)

GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC  >  NC_000913/342342‑342528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`