Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
342,435 |
A→G |
M110V (ATG→GTG) |
yahK → |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 342,435 | 0 | A | G | 100.0%
| 658.0
/ NA
| 188 | M110V (ATG→GTG) | yahK | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/92); total (96/92) |
Only 100 of 198 total aligned reads displayed.
GGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATAT > NC_000913/342347‑342524
|
aTCTGGTCGGTGTCGGCTGCATTGTCGACAGTCGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCa < 1:6078407/93‑1 (MQ=255)
tCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAc > 1:2335409/1‑93 (MQ=255)
tGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCt > 1:3434876/1‑93 (MQ=255)
ggTTGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCta > 1:5739663/1‑93 (MQ=255)
ggTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCta < 1:3196224/93‑1 (MQ=255)
ggTCGGTGGCGGCTGCATGGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCta < 1:2331641/93‑1 (MQ=255)
gTCGGTTTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCtat < 1:1593896/93‑1 (MQ=255)
gTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCtat > 1:663169/1‑93 (MQ=255)
cGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATaa > 1:2000642/1‑93 (MQ=255)
cGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATaa > 2:5731702/1‑93 (MQ=255)
cGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATaa < 1:2536302/93‑1 (MQ=255)
ggTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAc < 1:6268424/93‑1 (MQ=255)
ggTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAc < 1:3924570/93‑1 (MQ=255)
ggTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAc < 2:5172128/93‑1 (MQ=255)
gtgtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACt > 2:81894/1‑93 (MQ=255)
gtgtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACt > 1:3060204/1‑93 (MQ=255)
tgtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTc < 1:1790610/93‑1 (MQ=255)
tgtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTc < 2:3907072/93‑1 (MQ=255)
gtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTcc > 1:4821429/1‑92 (MQ=255)
gtCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCg > 1:642639/1‑93 (MQ=255)
tCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGc > 2:4218854/1‑93 (MQ=255)
tCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGc > 1:3528989/1‑93 (MQ=255)
cGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGcc < 1:1044202/93‑1 (MQ=255)
gCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACTTATAACTCGCCGa > 2:1318003/1‑93 (MQ=255)
gCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGa < 2:6462125/93‑1 (MQ=255)
gCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGa < 2:4011468/93‑1 (MQ=255)
cTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGAc > 1:603397/1‑93 (MQ=255)
cTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGAc > 1:2513818/1‑93 (MQ=255)
tGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACg > 2:3015752/1‑93 (MQ=255)
tGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCAGACg > 1:5570535/1‑93 (MQ=255)
gCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGAGCGGCACCTATAACTCGCCGACGc > 2:76572/1‑93 (MQ=255)
gCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGc > 1:2769535/1‑93 (MQ=255)
aTTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCg < 1:5040077/93‑1 (MQ=255)
ttGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCgg > 2:736758/1‑93 (MQ=255)
ttGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCgg < 2:2031510/93‑1 (MQ=255)
ttGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCgg > 1:1455882/1‑93 (MQ=255)
tGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGa < 1:921816/93‑1 (MQ=255)
gTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAc > 2:1056769/1‑93 (MQ=255)
cGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGa > 2:3643604/1‑93 (MQ=255)
gACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGaa > 2:703475/1‑93 (MQ=255)
aCAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAc < 2:3795239/93‑1 (MQ=255)
aCAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAc > 1:852477/1‑93 (MQ=255)
cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAcc > 2:5698117/1‑93 (MQ=255)
cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAcc > 2:6016502/1‑93 (MQ=255)
cAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAcc < 2:618348/93‑1 (MQ=255)
aGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCg > 1:2624823/1‑93 (MQ=255)
gTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTGCTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCgg < 1:724246/93‑1 (MQ=255)
ttGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCggg > 1:2684676/1‑93 (MQ=255)
ttGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTAGCCGACGCCGGACGAACCggg < 1:1390693/93‑1 (MQ=255)
ttGTAAACATTGCGAAGAGTGTGAAGACGGGGTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCggg > 2:3732521/1‑93 (MQ=255)
tGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGc < 1:1068978/93‑1 (MQ=255)
tGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGc < 2:2277376/93‑1 (MQ=255)
tAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCa > 2:283997/1‑93 (MQ=255)
tAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCa > 2:4136632/1‑93 (MQ=255)
aaCATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATa < 1:23937/93‑1 (MQ=255)
cATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAct < 2:2409376/93‑1 (MQ=255)
cATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAct < 2:4384359/93‑1 (MQ=255)
aTTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATActc < 1:2085180/93‑1 (MQ=255)
aTTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATActc < 2:4467554/93‑1 (MQ=255)
ttGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATActct > 1:3852629/1‑93 (MQ=255)
tGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTg < 2:3219533/93‑1 (MQ=255)
gCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTgg < 1:3311306/93‑1 (MQ=255)
gCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTgg > 2:5277335/1‑93 (MQ=255)
aaGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcg > 1:695289/1‑93 (MQ=255)
aaGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcg < 2:5077590/93‑1 (MQ=255)
aaGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcg > 1:4157233/1‑93 (MQ=255)
agagTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGggcgg > 2:1664113/1‑93 (MQ=255)
agTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCt < 1:5400952/93‑1 (MQ=255)
gtgtGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTa > 1:2162209/1‑93 (MQ=255)
tgtgAAGACGGGTTGGAAAACTACTGTGATCACGTGACTGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTAc < 2:6113940/93‑1 (MQ=255)
tgtgAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTAc < 1:2714597/93‑1 (MQ=255)
gtgAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGATGAACCCGGTCATAGTCTGGGCGGCTACt > 1:5693792/1‑93 (MQ=255)
tgAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTc < 2:2633098/93‑1 (MQ=255)
tgAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTc > 2:48786/1‑93 (MQ=255)
gAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGCGCGGCTACTca < 2:1883314/93‑1 (MQ=255)
aGACGGGTTGGCAAACTACTGTGATCACGTGACCGGCACCTATAACTAGCCGACGCCGGACGAACCTTGCCCTACTCTCGGCGGTTGCTcaca > 2:2976404/1‑93 (MQ=255)
gACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaa < 2:2670061/93‑1 (MQ=255)
aCGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaac < 1:1034412/93‑1 (MQ=255)
aCGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaac < 2:477947/93‑1 (MQ=255)
cGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaaca < 1:4320449/93‑1 (MQ=255)
cGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCacaaca < 1:3226033/93‑1 (MQ=255)
gggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAg > 2:5867770/1‑93 (MQ=255)
gggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAg > 2:6415091/1‑93 (MQ=255)
gggTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAg > 1:3734211/1‑93 (MQ=255)
ggTTGGAAAGCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGa < 1:5200861/93‑1 (MQ=255)
gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAt < 1:4081780/93‑1 (MQ=255)
gTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAt < 1:5081764/93‑1 (MQ=255)
ttGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtc > 1:5926803/1‑93 (MQ=255)
gAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtcgtc < 2:5979613/93‑1 (MQ=255)
aaaaCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtcgtcg > 2:899046/1‑93 (MQ=255)
aaaaCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAtcgtcg > 2:96946/1‑93 (MQ=255)
aaCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGtt > 1:5808933/1‑93 (MQ=255)
actactGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTc < 1:638167/93‑1 (MQ=255)
ctactGTGATGCGGTGACCGGCACCTATAACTCGCCGACGCCCGACAAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATAGTCGTTCa < 2:6294539/93‑1 (MQ=255)
ctactGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCa < 1:4566916/93‑1 (MQ=255)
actGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATg < 2:1397452/93‑1 (MQ=255)
tgtgATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAg > 1:984780/1‑93 (MQ=255)
gtgATCACGTGACCGGCACCTATACCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGc < 2:2551568/93‑1 (MQ=255)
gtgATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGc < 1:4630285/93‑1 (MQ=255)
tgATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCg > 1:484414/1‑93 (MQ=255)
|
GGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATAT > NC_000913/342347‑342524
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC > NC_000913/342342‑342528
|
GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACG < SRR4302537.1595888/94‑1 (MQ=60)
GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACG > SRR4302537.4150363/1‑94 (MQ=60)
CGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGT > SRR4302537.2716975/1‑94 (MQ=60)
CGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGT > SRR4302537.3754377/1‑94 (MQ=60)
GCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTG < SRR4302537.2787572/94‑1 (MQ=60)
GGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACC < SRR4302537.4524106/94‑1 (MQ=60)
GGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCG < SRR4302537.2871814/94‑1 (MQ=60)
GCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGG < SRR4302537.844230/94‑1 (MQ=60)
CGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGC < SRR4302537.1056384/94‑1 (MQ=60)
ATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAC > SRR4302537.2351870/1‑94 (MQ=60)
ATCTGGTCGGTGTCGGCTGCATTGTCGACAGTCGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCAC < SRR4302537.6120175/94‑1 (MQ=60)
TCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACC < SRR4302537.4868745/94‑1 (MQ=60)
CTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCT > SRR4302537.3459186/1‑94 (MQ=60)
TGGTTGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTA > SRR4302537.5778963/1‑94 (MQ=60)
GGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTAT < SRR4302537.3218699/94‑1 (MQ=60)
GGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTAT > SRR4302537.3371989/1‑94 (MQ=60)
GGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTAT > SRR4302537.667684/1‑94 (MQ=60)
GGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTAT > SRR4302537.2379989/1‑94 (MQ=60)
GGTCGGTGGCGGCTGCATGGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTAT < SRR4302537.2348078/94‑1 (MQ=60)
GTCGGTTTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATA < SRR4302537.1605036/94‑1 (MQ=60)
TCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAA > SRR4302537.2014554/1‑94 (MQ=60)
CGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAAC < SRR4302537.2554100/94‑1 (MQ=60)
GGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACT < SRR4302537.3951989/94‑1 (MQ=60)
GGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACT > SRR4302537.3081526/1‑94 (MQ=60)
GGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACT < SRR4302537.6311447/94‑1 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG > SRR4302537.3663455/1‑94 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG < SRR4302537.1803113/94‑1 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG > SRR4302537.647016/1‑94 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCG > SRR4302537.5023310/1‑94 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCC > SRR4302537.3320976/1‑94 (MQ=60)
TGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCC > SRR4302537.4854730/1‑94 (MQ=60)
GTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGC > SRR4302537.3553944/1‑94 (MQ=60)
TCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCC > SRR4302537.644700/1‑94 (MQ=60)
TCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCC < SRR4302537.25516/94‑1 (MQ=60)
TCGGCTGCATAGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGATTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCC < SRR4302537.6511221/94‑1 (MQ=60)
CGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCG < SRR4302537.1051408/94‑1 (MQ=60)
GGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGA > SRR4302537.2350139/1‑94 (MQ=60)
GCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGAC > SRR4302537.607524/1‑94 (MQ=60)
GCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGAC > SRR4302537.2531488/1‑94 (MQ=60)
CTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACG > SRR4302537.5242151/1‑94 (MQ=60)
CTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCAGACG > SRR4302537.5608610/1‑94 (MQ=60)
TGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGC > SRR4302537.2788887/1‑94 (MQ=60)
CATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCG < SRR4302537.6385254/94‑1 (MQ=60)
ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG < SRR4302537.5668879/94‑1 (MQ=60)
ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG < SRR4302537.5074778/94‑1 (MQ=60)
ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG > SRR4302537.1466021/1‑94 (MQ=60)
ATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTCGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGG > SRR4302537.3490491/1‑94 (MQ=60)
TGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGAC < SRR4302537.928182/94‑1 (MQ=60)
CGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAA < SRR4302537.2743865/94‑1 (MQ=60)
GACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAAC > SRR4302537.858318/1‑94 (MQ=60)
CAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCG > SRR4302537.2643214/1‑94 (MQ=60)
GTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTGCTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGG < SRR4302537.729188/94‑1 (MQ=60)
GTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGG > SRR4302537.2703419/1‑94 (MQ=60)
TTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTAGCCGACGCCGGACGAACCGGGC < SRR4302537.1400392/94‑1 (MQ=60)
TGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCC < SRR4302537.1076347/94‑1 (MQ=60)
AAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATA > SRR4302537.952700/1‑94 (MQ=60)
AACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAC < SRR4302537.24121/94‑1 (MQ=60)
AACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAC > SRR4302537.15674/1‑94 (MQ=60)
AACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAC < SRR4302537.2166636/94‑1 (MQ=60)
AACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATAC > SRR4302537.222280/1‑94 (MQ=60)
ACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACT > SRR4302537.5908027/1‑94 (MQ=60)
ATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCT < SRR4302537.2099878/94‑1 (MQ=60)
ATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCT > SRR4302537.1651743/1‑94 (MQ=60)
ATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCT > SRR4302537.3879603/1‑94 (MQ=60)
TGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGG < SRR4302537.2564777/94‑1 (MQ=60)
GCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGG < SRR4302537.3334731/94‑1 (MQ=60)
CGAAGAGGGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGC < SRR4302537.126760/94‑1 (MQ=60)
GAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCG > SRR4302537.4186266/1‑94 (MQ=60)
GAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCG > SRR4302537.700057/1‑94 (MQ=60)
AAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGG > SRR4302537.5739858/1‑94 (MQ=60)
AAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGG > SRR4302537.5840366/1‑94 (MQ=60)
GAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCT < SRR4302537.5499390/94‑1 (MQ=60)
AGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTA > SRR4302537.2177447/1‑94 (MQ=60)
AGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTA < SRR4302537.4648169/94‑1 (MQ=60)
AGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTA > SRR4302537.3235402/1‑94 (MQ=60)
AGTGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTA < SRR4302537.5437815/94‑1 (MQ=60)
TGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGATGAACCCGGTCATAGTCTGGGCGGCTACT > SRR4302537.5732732/1‑94 (MQ=60)
TGTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACT < SRR4302537.2733552/94‑1 (MQ=60)
GTGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTC > SRR4302537.2008716/1‑94 (MQ=60)
TGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCA < SRR4302537.4664023/94‑1 (MQ=60)
TGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCA > SRR4302537.4259822/1‑94 (MQ=60)
TGAAGACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCA > SRR4302537.89797/1‑94 (MQ=60)
ACGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACA < SRR4302537.1041539/94‑1 (MQ=60)
CGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAG < SRR4302537.4350482/94‑1 (MQ=60)
CGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAG < SRR4302537.3248736/94‑1 (MQ=60)
CGGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAG > SRR4302537.3760441/1‑94 (MQ=60)
GGGTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGA > SRR4302537.998511/1‑94 (MQ=60)
GGTTGGAAAGCTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAT < SRR4302537.5236638/94‑1 (MQ=60)
GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC < SRR4302537.5116742/94‑1 (MQ=60)
GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC > SRR4302537.5967477/1‑94 (MQ=60)
GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC < SRR4302537.603241/94‑1 (MQ=60)
GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATC < SRR4302537.4110277/94‑1 (MQ=60)
GTTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCAATACTCTGGGCGGCTACTCACAACAGATC > SRR4302537.6095786/1‑94 (MQ=60)
TTGGAAAACTACTGTGATCACGTGACCGGCACCTATAGCTCGCCGACGCCGGACGACCCGGGCCATACTCTGGGCGGCTACTCACAACAGATCG < SRR4302537.2484372/94‑1 (MQ=60)
TTGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCG < SRR4302537.5115294/94‑1 (MQ=60)
TGGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGT < SRR4302537.41700/94‑1 (MQ=60)
GGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTC < SRR4302537.4076963/94‑1 (MQ=60)
GGAAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCAGGCCATACTCTGGGCGGCTACTCACAACAGATCGTC < SRR4302537.2720217/94‑1 (MQ=60)
AAAACTACTGTGATCACGTGACCGGCACCTATACCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGT < SRR4302537.677200/94‑1 (MQ=60)
AAAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGT > SRR4302537.3177175/1‑94 (MQ=60)
AAACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTT > SRR4302537.5848764/1‑94 (MQ=60)
ACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCA < SRR4302537.1457703/94‑1 (MQ=60)
ACTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCA < SRR4302537.642511/94‑1 (MQ=60)
CTACTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCAT < SRR4302537.4598527/94‑1 (MQ=60)
CTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG < SRR4302537.3814003/94‑1 (MQ=60)
CTGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAG > SRR4302537.991580/1‑94 (MQ=60)
TGTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGC > SRR4302537.519083/1‑94 (MQ=60)
GTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCG > SRR4302537.6168890/1‑94 (MQ=60)
GTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCG < SRR4302537.4662319/94‑1 (MQ=60)
GTGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCG > SRR4302537.487734/1‑94 (MQ=60)
TGATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGA > SRR4302537.2077257/1‑94 (MQ=60)
ATCACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATA > SRR4302537.2669952/1‑94 (MQ=60)
ATCACGTGACAGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATA > SRR4302537.3932014/1‑94 (MQ=60)
CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG > SRR4302537.4812554/1‑94 (MQ=60)
CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG > SRR4302537.931329/1‑94 (MQ=60)
CACGTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATG > SRR4302537.1966827/1‑94 (MQ=60)
GTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC < SRR4302537.4193024/94‑1 (MQ=60)
GTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC > SRR4302537.648150/1‑94 (MQ=60)
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GCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTC > NC_000913/342342‑342528
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
