Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 418,134 T→C V341A (GTA→GCA)  phoR → positive and negative sensor protein for pho regulon

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913418,1340TC98.7% 1260.8 / 2.3 378V341A (GTA→GCA) phoRpositive and negative sensor protein for pho regulon
Reads supporting (aligned to +/- strand):  ref base T (1/4);  new base C (201/172);  total (202/176)
Fisher's exact test for biased strand distribution p-value = 1.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 390 total aligned reads displayed.

GTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGA  >  NC_000913/418043‑418224
                                                                                           |                                                                                          
gtgtCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGAAGGCATATCACCGAAc                                                                                          >  2:3164383/1‑94 (MQ=255)
 tgtCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACg                                                                                         >  1:4013327/1‑94 (MQ=255)
   tCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCt                                                                                       <  2:1101713/94‑1 (MQ=255)
    cTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTg                                                                                      <  2:693639/94‑1 (MQ=255)
     tGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTgg                                                                                     >  1:9907097/1‑94 (MQ=255)
     tGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTgg                                                                                     >  1:1429273/1‑94 (MQ=255)
      ggCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGc                                                                                    <  1:288771/94‑1 (MQ=255)
       gCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCa                                                                                   <  1:2468383/94‑1 (MQ=255)
        cAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAg                                                                                  <  2:5201903/94‑1 (MQ=255)
        cAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAg                                                                                  <  1:4730051/94‑1 (MQ=255)
         aaCGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGc                                                                                 <  1:6026384/94‑1 (MQ=255)
          aCGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCg                                                                                <  1:7964601/94‑1 (MQ=255)
            gAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAg                                                                              >  2:2945009/1‑94 (MQ=255)
            gAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAg                                                                              <  2:9300668/94‑1 (MQ=255)
             aaGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGt                                                                             <  1:7346942/94‑1 (MQ=255)
              aGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTg                                                                            <  1:6153289/94‑1 (MQ=255)
               gATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGc                                                                           >  1:6568408/1‑94 (MQ=255)
                aTCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCANCGCACGCTGGCNGNGAGTNcc                                                                          >  2:5938131/1‑94 (MQ=255)
                 tCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCg                                                                         <  1:1298528/94‑1 (MQ=255)
                  cAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGc                                                                        >  2:10171206/1‑94 (MQ=255)
                   aGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCa                                                                       <  1:8866622/94‑1 (MQ=255)
                   aGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCa                                                                       >  1:7155460/1‑94 (MQ=255)
                    gCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCAc                                                                      <  1:6834612/94‑1 (MQ=255)
                     cTACGCAGTGCGATTTCGAACCTGGTCAATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACg                                                                     <  1:7539420/94‑1 (MQ=255)
                        cGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTg                                                                  <  2:8619605/94‑1 (MQ=255)
                        cGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTg                                                                  >  2:509550/1‑94 (MQ=255)
                        cGCAGTGCGATTTCGAACCTGGACTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTg                                                                  <  2:1556082/94‑1 (MQ=255)
                          cAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGcc                                                                >  2:3801082/1‑94 (MQ=255)
                          cAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGcc                                                                >  2:8280717/1‑94 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCg                                                               >  1:1247882/1‑94 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCg                                                               <  1:8333698/94‑1 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCg                                                               >  1:2029065/1‑94 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCg                                                               <  2:5520897/94‑1 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCg                                                               <  2:895557/94‑1 (MQ=255)
                           aGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCAAGGTgaca                                                               <  1:9347714/94‑4 (MQ=255)
                             tGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGaa                                                             >  2:3580172/1‑94 (MQ=255)
                              gCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAt                                                            <  2:6212062/94‑1 (MQ=255)
                               cGATTTCGAACCTGGTCTATAACTCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAtt                                                           <  2:1522968/94‑1 (MQ=255)
                                gATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAttt                                                          >  2:1840036/1‑94 (MQ=255)
                                gATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGAACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAttt                                                          >  2:2571677/1‑94 (MQ=255)
                                 aTTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTa                                                         >  1:56636/1‑94 (MQ=255)
                                 aTTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGCGCCGCACGGTGCCGAATTTa                                                         >  2:333859/1‑94 (MQ=255)
                                  tttCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAg                                                        <  1:4109767/94‑1 (MQ=255)
                                  tttCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAACTTAg                                                        >  2:4546508/1‑94 (MQ=255)
                                    tCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCg                                                      >  2:5703230/1‑94 (MQ=255)
                                      gAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGtt                                                    <  2:6728199/94‑1 (MQ=255)
                                      gAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGtt                                                    >  2:9762288/1‑94 (MQ=255)
                                        aCCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGa                                                  >  1:2633672/1‑94 (MQ=255)
                                         ccTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGaa                                                 <  2:6661379/94‑1 (MQ=255)
                                           tGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGa                                               <  2:4148411/94‑1 (MQ=255)
                                           tGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGa                                               <  2:10467413/94‑1 (MQ=255)
                                           tGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGa                                               >  1:2426048/1‑94 (MQ=255)
                                            ggTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAt                                              >  2:4765056/1‑94 (MQ=255)
                                            ggTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAt                                              <  1:10064826/94‑1 (MQ=255)
                                            ggTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAt                                              <  2:1277797/94‑1 (MQ=255)
                                             gTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATa                                             <  1:1806404/94‑1 (MQ=255)
                                              tCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATaa                                            <  2:5634467/94‑1 (MQ=255)
                                               cTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAc                                           >  1:7887429/1‑94 (MQ=255)
                                               cTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAc                                           <  2:3786107/94‑1 (MQ=255)
                                               cTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAc                                           >  2:4163881/1‑94 (MQ=255)
                                               cTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAc                                           <  2:4413380/94‑1 (MQ=255)
                                                  taACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGa                                        >  1:4511826/1‑94 (MQ=255)
                                                   aaCGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGAc                                       >  2:9545236/1‑94 (MQ=255)
                                                    aCGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGAcc                                      <  2:4048364/94‑1 (MQ=255)
                                                     cGCCGTGAATCATCCGCCGGAAGGCGCGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCg                                     <  2:8380119/94‑1 (MQ=255)
                                                     cGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCg                                     >  1:2131124/1‑94 (MQ=255)
                                                     cGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCg                                     <  1:4955290/94‑1 (MQ=255)
                                                     cGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCg                                     <  2:5017583/94‑1 (MQ=255)
                                                      gCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCgg                                    <  2:2225741/94‑1 (MQ=255)
                                                       ccGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCggg                                   >  2:9616049/1‑94 (MQ=255)
                                                        cGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGc                                  >  1:8719792/1‑94 (MQ=255)
                                                        cGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGc                                  <  1:9170935/94‑1 (MQ=255)
                                                           gAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCAtt                               >  1:3511221/1‑94 (MQ=255)
                                                             aTCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCCGGCATTGc                             >  1:5726218/1‑94 (MQ=255)
                                                                aTACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATGTAGCGTTGAAGATAACGGACCGGGCATTGCAcc                          >  2:4278235/1‑94 (MQ=255)
                                                                 tACGCCGGCCGGCACGCATCTCACCGCACGCTGGCAGCAGGTACCGCACGGTGCCGATTTTGGCGTTGGAGATAACGGACCGGGCCTTGCACCg                         <  2:8087744/94‑1 (MQ=255)
                                                                 tACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCg                         <  1:10243538/94‑1 (MQ=255)
                                                                 tACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCg                         <  1:229188/94‑1 (MQ=255)
                                                                 tACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGCGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCAcca                         <  1:3671902/94‑2 (MQ=255)
                                                                  aCGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGCTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCAGCgg                        >  1:632374/1‑94 (MQ=255)
                                                                   cGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGa                       <  1:2766418/94‑1 (MQ=255)
                                                                    gCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAg                      >  2:7737915/1‑94 (MQ=255)
                                                                     ccGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGc                     >  2:5788077/1‑94 (MQ=255)
                                                                     ccGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGc                     <  1:8434220/94‑1 (MQ=255)
                                                                       ggAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACCGACCGGGCATTGCACCGGAGCat                   >  1:5481240/1‑94 (MQ=255)
                                                                            gCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTcc              >  2:8804963/1‑94 (MQ=255)
                                                                             cACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCcg             >  1:3155507/1‑94 (MQ=255)
                                                                              aCGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCGCCGGAGCATATTCcgc            <  1:4311981/94‑1 (MQ=255)
                                                                              aCGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCcgc            <  2:7885435/94‑1 (MQ=255)
                                                                               cGCACATCACCGCGCGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCcgcg           <  2:6450150/94‑1 (MQ=255)
                                                                                gCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCgcgc          >  2:9935330/1‑94 (MQ=255)
                                                                                gCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCgcgc          >  1:9112972/1‑94 (MQ=255)
                                                                                 cATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGcc         <  2:7496852/94‑1 (MQ=255)
                                                                                  atatCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGTGCATTGCACCGGAGCATATTCTGGGCCt        >  2:7152442/1‑94 (MQ=255)
                                                                                  atatCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCt        <  2:7367937/94‑1 (MQ=255)
                                                                                  atatCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCt        >  2:2461862/1‑94 (MQ=255)
                                                                                   tatCACCGCACGCTGGCAGCGAGTGCCGCCCGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTg       <  2:10303425/94‑1 (MQ=255)
                                                                                    atCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGa      >  1:10607526/1‑94 (MQ=255)
                                                                                    atCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGa      >  2:5287238/1‑94 (MQ=255)
                                                                                      cACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGAcc    <  2:4594767/94‑1 (MQ=255)
                                                                                           |                                                                                          
GTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGA  >  NC_000913/418043‑418224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  NC_000913/418041‑418227
                                                                                             |                                                                                             
AGGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGC                                                                                               >  SRR4302545.9361429/1‑94 (MQ=60)
 ggtgtgtgacaaaaAAGATCAGCTACGCAGTGCGTTTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCA                                                                                              <  SRR4302545.8659848/80‑1 (MQ=60)
 GGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCA                                                                                              <  SRR4302545.3854847/94‑1 (MQ=60)
 GGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCA                                                                                              <  SRR4302545.3854495/94‑1 (MQ=60)
 GGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCA                                                                                              <  SRR4302545.3854494/94‑1 (MQ=60)
  GTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCAC                                                                                             <  SRR4302545.6306977/94‑1 (MQ=60)
  GTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCAC                                                                                             <  SRR4302545.6888313/94‑1 (MQ=60)
   TGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACG                                                                                            >  SRR4302545.4113728/1‑94 (MQ=60)
      CTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTG                                                                                         <  SRR4302545.724246/94‑1 (MQ=60)
      CTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACAGCACGCTG                                                                                         >  SRR4302545.8940273/1‑94 (MQ=60)
       TGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGG                                                                                        >  SRR4302545.10201411/1‑94 (MQ=60)
       TGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGG                                                                                        >  SRR4302545.1461699/1‑94 (MQ=60)
        GGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGC                                                                                       <  SRR4302545.294820/94‑1 (MQ=60)
        GGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGC                                                                                       <  SRR4302545.4129699/94‑1 (MQ=60)
        GGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGC                                                                                       >  SRR4302545.5183890/1‑94 (MQ=60)
         GCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCA                                                                                      >  SRR4302545.935868/1‑94 (MQ=60)
         GCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCA                                                                                      <  SRR4302545.2528130/94‑1 (MQ=60)
          CAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAG                                                                                     <  SRR4302545.6278676/94‑1 (MQ=60)
          CAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAG                                                                                     <  SRR4302545.3965848/94‑1 (MQ=60)
          CAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAG                                                                                     >  SRR4302545.2952470/1‑94 (MQ=60)
          CAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAG                                                                                     <  SRR4302545.4850683/94‑1 (MQ=60)
           AACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGC                                                                                    >  SRR4302545.5827230/1‑94 (MQ=60)
           AACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGC                                                                                    <  SRR4302545.6189162/94‑1 (MQ=60)
           AACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGC                                                                                    >  SRR4302545.7724650/1‑94 (MQ=60)
            ACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCG                                                                                   <  SRR4302545.8190998/94‑1 (MQ=60)
             AGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGA                                                                                  <  SRR4302545.7252943/94‑1 (MQ=60)
              GAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAG                                                                                 >  SRR4302545.9193438/1‑94 (MQ=60)
               AAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGT                                                                                <  SRR4302545.7553290/94‑1 (MQ=60)
               AAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGT                                                                                >  SRR4302545.5665252/1‑94 (MQ=60)
                AGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTG                                                                               <  SRR4302545.10923955/94‑1 (MQ=60)
                AGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTG                                                                               <  SRR4302545.6320728/94‑1 (MQ=60)
                 GATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGC                                                                              >  SRR4302545.2279689/1‑94 (MQ=60)
                 GATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGC                                                                              >  SRR4302545.6748135/1‑94 (MQ=60)
                 GATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGC                                                                              >  SRR4302545.3462188/1‑94 (MQ=60)
                   TCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCG                                                                            <  SRR4302545.800759/94‑1 (MQ=60)
                   TCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCG                                                                            <  SRR4302545.1327364/94‑1 (MQ=60)
                    CAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGC                                                                           >  SRR4302545.8117235/1‑94 (MQ=60)
                     AGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCA                                                                          >  SRR4302545.7354086/1‑94 (MQ=60)
                     AGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCA                                                                          >  SRR4302545.6365030/1‑94 (MQ=60)
                     AGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCA                                                                          >  SRR4302545.2347407/1‑94 (MQ=60)
                     AGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCA                                                                          >  SRR4302545.2121810/1‑94 (MQ=60)
                     AGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCA                                                                          <  SRR4302545.9124209/94‑1 (MQ=60)
                      GCTACGCAGTGCGATTTCGAACCTGGTCTATACCGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCAC                                                                         <  SRR4302545.5758040/94‑1 (MQ=60)
                      GCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCAC                                                                         >  SRR4302545.7655777/1‑94 (MQ=60)
                      GCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCAC                                                                         <  SRR4302545.7022394/94‑1 (MQ=60)
                      GCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCAC                                                                         <  SRR4302545.4347498/94‑1 (MQ=60)
                       CTACGCAGTGCGATTTCGAACCTGGTCAATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACG                                                                        <  SRR4302545.7752648/94‑1 (MQ=60)
                       CTACGCACTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACG                                                                        >  SRR4302545.10901990/1‑94 (MQ=60)
                         ACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGT                                                                      <  SRR4302545.4831953/94‑1 (MQ=60)
                         ACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGT                                                                      >  SRR4302545.4409513/1‑94 (MQ=60)
                         ACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGG                                                                      >  SRR4302545.8514747/1‑94 (MQ=60)
                          CGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTG                                                                     <  SRR4302545.2955219/94‑1 (MQ=60)
                           GCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGC                                                                    <  SRR4302545.6439394/94‑1 (MQ=60)
                           GCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGC                                                                    >  SRR4302545.10521727/1‑94 (MQ=60)
                           GCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGCGC                                                                    >  SRR4302545.10185446/1‑94 (MQ=60)
                            CAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATGATACGCCGGAAGGCACGCATATCCCCGCACGCTGGCAGCGACGTCCGCACGGTGCC                                                                   >  SRR4302545.2721945/1‑94 (MQ=60)
                            CAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCC                                                                   >  SRR4302545.2721944/1‑94 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCAaggtgaca                                                                  <  SRR4302545.9621863/94‑9 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  >  SRR4302545.5816340/1‑94 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  >  SRR4302545.1275928/1‑94 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  <  SRR4302545.8575179/94‑1 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  >  SRR4302545.2079135/1‑94 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  >  SRR4302545.4517918/1‑94 (MQ=60)
                             AGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCG                                                                  >  SRR4302545.3563268/1‑94 (MQ=60)
                              GTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGA                                                                 >  SRR4302545.2389293/1‑94 (MQ=60)
                              GTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGA                                                                 >  SRR4302545.5106730/1‑94 (MQ=60)
                              GTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGA                                                                 <  SRR4302545.9407006/94‑1 (MQ=60)
                                GCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAT                                                               <  SRR4302545.4617138/94‑1 (MQ=60)
                                GCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAT                                                               <  SRR4302545.5589107/94‑1 (MQ=60)
                                GCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAAT                                                               <  SRR4302545.5839280/94‑1 (MQ=60)
                                 CGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATT                                                              >  SRR4302545.6378332/1‑94 (MQ=60)
                                 CGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATT                                                              >  SRR4302545.857811/1‑94 (MQ=60)
                                  GATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTT                                                             >  SRR4302545.2010935/1‑94 (MQ=60)
                                   ATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTA                                                            >  SRR4302545.57894/1‑94 (MQ=60)
                                    TTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAG                                                           <  SRR4302545.4212619/94‑1 (MQ=60)
                                     TTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGC                                                          <  SRR4302545.7158252/94‑1 (MQ=60)
                                     TTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGC                                                          <  SRR4302545.2998447/94‑1 (MQ=60)
                                      TCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCG                                                         >  SRR4302545.6108860/1‑94 (MQ=60)
                                       CGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGT                                                        <  SRR4302545.4829277/94‑1 (MQ=60)
                                        GAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTT                                                       >  SRR4302545.1220945/1‑94 (MQ=60)
                                          ACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGA                                                     >  SRR4302545.6846930/1‑94 (MQ=60)
                                          ACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGA                                                     >  SRR4302545.2697048/1‑94 (MQ=60)
                                           CCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAA                                                    >  SRR4302545.1178294/1‑94 (MQ=60)
                                           CCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAA                                                    >  SRR4302545.2958466/1‑94 (MQ=60)
                                           CCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAA                                                    >  SRR4302545.1516622/1‑94 (MQ=60)
                                            CTGGTCTATAACGTCGTGAATCTTACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAG                                                   >  SRR4302545.9692882/1‑94 (MQ=60)
                                             TGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGA                                                  >  SRR4302545.2484818/1‑94 (MQ=60)
                                              GGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAT                                                 <  SRR4302545.24975/94‑1 (MQ=60)
                                              GGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAT                                                 >  SRR4302545.877298/1‑94 (MQ=60)
                                              GGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAT                                                 <  SRR4302545.10362670/94‑1 (MQ=60)
                                              GGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAT                                                 <  SRR4302545.7780570/94‑1 (MQ=60)
                                              GGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGAA                                                 >  SRR4302545.8336336/1‑94 (MQ=60)
                                               GTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATA                                                <  SRR4302545.7299898/94‑1 (MQ=60)
                                               GTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATA                                                <  SRR4302545.1850123/94‑1 (MQ=60)
                                                TCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAA                                               <  SRR4302545.10864772/94‑1 (MQ=60)
                                                TCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAA                                               <  SRR4302545.4271080/94‑1 (MQ=60)
                                                TCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAA                                               >  SRR4302545.859023/1‑94 (MQ=60)
                                                TCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAA                                               >  SRR4302545.1613366/1‑94 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              <  SRR4302545.1391828/94‑1 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              <  SRR4302545.4212144/94‑1 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              <  SRR4302545.9179160/94‑1 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              >  SRR4302545.8111252/1‑94 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              <  SRR4302545.1391827/94‑1 (MQ=60)
                                                 CTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAAC                                              <  SRR4302545.5655396/94‑1 (MQ=60)
                                                  TATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACG                                             <  SRR4302545.9486643/94‑1 (MQ=60)
                                                  TATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACG                                             >  SRR4302545.2267744/1‑94 (MQ=60)
                                                   ATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGG                                            <  SRR4302545.6686387/94‑1 (MQ=60)
                                                   ATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGG                                            >  SRR4302545.4191050/1‑94 (MQ=60)
                                                    TAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGA                                           <  SRR4302545.7508068/94‑1 (MQ=60)
                                                    TAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGA                                           >  SRR4302545.4627315/1‑94 (MQ=60)
                                                       CGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCG                                        >  SRR4302545.2183387/1‑94 (MQ=60)
                                                       CGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCG                                        <  SRR4302545.5080824/94‑1 (MQ=60)
                                                       CGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCG                                        >  SRR4302545.10406851/1‑94 (MQ=60)
                                                          CGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGC                                     >  SRR4302545.8972824/1‑94 (MQ=60)
                                                          CGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGC                                     >  SRR4302545.3829344/1‑94 (MQ=60)
                                                          CGTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGC                                     <  SRR4302545.9439991/94‑1 (MQ=60)
                                                           GTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCA                                    >  SRR4302545.9425221/1‑94 (MQ=60)
                                                           GTGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCA                                    <  SRR4302545.2062914/94‑1 (MQ=60)
                                                            TGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCAT                                   >  SRR4302545.610585/1‑94 (MQ=60)
                                                            TGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCAT                                   <  SRR4302545.8993966/94‑1 (MQ=60)
                                                            TGAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCAT                                   <  SRR4302545.8993964/94‑1 (MQ=60)
                                                             GAATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATT                                  >  SRR4302545.3597336/1‑94 (MQ=60)
                                                             GAACCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATT                                  <  SRR4302545.7864900/94‑1 (MQ=60)
                                                               ATCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCCGGCATTGC                                >  SRR4302545.5879860/1‑94 (MQ=60)
                                                                TCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCA                               <  SRR4302545.2651090/94‑1 (MQ=60)
                                                                TCATACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCA                               <  SRR4302545.2627529/94‑1 (MQ=60)
                                                                   TACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCG                            <  SRR4302545.10545963/94‑1 (MQ=60)
                                                                   TACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCG                            <  SRR4302545.233933/94‑1 (MQ=60)
                                                                   TACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGCGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCA                            <  SRR4302545.3761702/94‑1 (MQ=60)
                                                                    ACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGG                           >  SRR4302545.2144675/1‑94 (MQ=60)
                                                                    ACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGG                           >  SRR4302545.6718170/1‑94 (MQ=60)
                                                                    ACGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGCTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCAGCGG                           >  SRR4302545.646541/1‑94 (MQ=60)
                                                                     CGCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGA                          <  SRR4302545.2833185/94‑1 (MQ=60)
                                                                      GCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAG                         >  SRR4302545.1365965/1‑94 (MQ=60)
                                                                      GCCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAG                         <  SRR4302545.9975134/94‑1 (MQ=60)
                                                                       CCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGC                        <  SRR4302545.8678105/94‑1 (MQ=60)
                                                                       CCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGC                        >  SRR4302545.5940135/1‑94 (MQ=60)
                                                                       CCGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGC                        <  SRR4302545.4992247/94‑1 (MQ=60)
                                                                        CGGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCA                       >  SRR4302545.3725518/1‑94 (MQ=60)
                                                                         GGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCAT                      >  SRR4302545.10554212/1‑94 (MQ=60)
                                                                         GGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCAT                      >  SRR4302545.8162122/1‑94 (MQ=60)
                                                                         GGAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACCGACCGGGCATTGCACCGGAGCAT                      >  SRR4302545.5625247/1‑94 (MQ=60)
                                                                         GGAAGGAACGCATATCACCGCACGCTGGCAGCGAGTGCCGCCCGGGGCCGAATTTAGCGTTGAAGATAACGGACCGGACAATGAAACGGAGCAT                      >  SRR4302545.8162123/1‑94 (MQ=60)
                                                                          GAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATA                     >  SRR4302545.8799895/1‑94 (MQ=60)
                                                                          GAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATA                     >  SRR4302545.2990059/1‑94 (MQ=60)
                                                                          GAAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATA                     <  SRR4302545.4888393/94‑1 (MQ=60)
                                                                           AAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATAT                    <  SRR4302545.9092910/94‑1 (MQ=60)
                                                                           AAGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATAT                    >  SRR4302545.3569255/1‑94 (MQ=60)
                                                                            AGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATT                   <  SRR4302545.735787/94‑1 (MQ=60)
                                                                            AGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATT                   >  SRR4302545.9530769/1‑94 (MQ=60)
                                                                            AGGCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTAAAGATAACGGACCGGGCATTGCCCCGGGGCATATT                   >  SRR4302545.2437636/1‑94 (MQ=60)
                                                                              GCACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCC                 <  SRR4302545.854531/94‑1 (MQ=60)
                                                                               CACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCG                >  SRR4302545.3233117/1‑94 (MQ=60)
                                                                               CACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCG                <  SRR4302545.1712753/94‑1 (MQ=60)
                                                                               CACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCG                >  SRR4302545.2857168/1‑94 (MQ=60)
                                                                                ACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCGCCGGAGCATATTCCGC               <  SRR4302545.4420584/94‑1 (MQ=60)
                                                                                ACGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGC               >  SRR4302545.2165775/1‑94 (MQ=60)
                                                                                 CGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCG              >  SRR4302545.1318531/1‑94 (MQ=60)
                                                                                 CGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCG              >  SRR4302545.249501/1‑94 (MQ=60)
                                                                                 CGCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCG              >  SRR4302545.6557059/1‑94 (MQ=60)
                                                                                  GCATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGC             >  SRR4302545.9380297/1‑94 (MQ=60)
                                                                                    ATATCACCGGACGCTGGCAGCGAGTGCAGCACGGTGCCGAATTTAGCGTTGAAGATAGCGGACCGGGCATTGCACCGGAGCGTATTGCGCGCCT           <  SRR4302545.390220/94‑1 (MQ=60)
                                                                                    ATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCT           >  SRR4302545.9450049/1‑94 (MQ=60)
                                                                                    ATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCT           >  SRR4302545.130152/1‑94 (MQ=60)
                                                                                    ATATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCT           <  SRR4302545.2620033/94‑1 (MQ=60)
                                                                                     TATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTG          <  SRR4302545.2474718/94‑1 (MQ=60)
                                                                                     TATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTC          >  SRR4302545.6273530/1‑94 (MQ=60)
                                                                                      ATCACCGCACGCTGGCAGCGCGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGA         >  SRR4302545.487293/1‑94 (MQ=60)
                                                                                      ATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGGGCCTGA         >  SRR4302545.7747476/1‑94 (MQ=60)
                                                                                      ATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGA         <  SRR4302545.1301373/94‑1 (MQ=60)
                                                                                      ATCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGA         >  SRR4302545.10919843/1‑94 (MQ=60)
                                                                                       TCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGAC        <  SRR4302545.3711974/94‑1 (MQ=60)
                                                                                       TCACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGAC        <  SRR4302545.1994045/94‑1 (MQ=60)
                                                                                        CACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCCCCGGAGCATATTCCGCGCCTGACC       <  SRR4302545.7524546/94‑1 (MQ=60)
                                                                                        CACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACC       <  SRR4302545.3853351/94‑1 (MQ=60)
                                                                                         ACCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCG      >  SRR4302545.8191578/1‑94 (MQ=60)
                                                                                          CCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGA     >  SRR4302545.2791219/1‑94 (MQ=60)
                                                                                          CCGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGA     <  SRR4302545.373404/94‑1 (MQ=60)
                                                                                           CGTACGCTGGCAGCGAGTGCCTGTCGGTACCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATACTCCGCGCCTGACCGAG    <  SRR4302545.7369502/94‑1 (MQ=60)
                                                                                           CGCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAG    <  SRR4302545.10165518/94‑1 (MQ=60)
                                                                                            GCACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGC   >  SRR4302545.2743832/1‑94 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  SRR4302545.312466/1‑94 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  SRR4302545.5085333/1‑94 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  <  SRR4302545.2612693/94‑1 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  SRR4302545.7095919/1‑94 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  SRR4302545.4730600/1‑94 (MQ=60)
                                                                                             CACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  <  SRR4302545.985659/94‑1 (MQ=60)
                                                                                             |                                                                                             
AGGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCG  >  NC_000913/418041‑418227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑