Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 419,777 C→T L321L (CTC→CTT brnQ → branched chain amino acid transport system II carrier protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913419,7770CT98.5% 1247.2 / ‑0.3 326L321L (CTC→CTTbrnQbranched chain amino acid transport system II carrier protein
Reads supporting (aligned to +/- strand):  ref base C (5/0);  new base T (192/129);  total (197/129)
Fisher's exact test for biased strand distribution p-value = 1.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.03e-01

Only 100 of 358 total aligned reads displayed.

CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGT  >  NC_000913/419684‑419867
                                                                                             |                                                                                          
     tgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTtggcgg                                                                                       >  1:9820203/1‑94 (MQ=255)
     tgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTtggcgg                                                                                       >  2:2816773/1‑94 (MQ=255)
      ggTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACACTGGTGTTTATCCTTggcggc                                                                                      >  1:5306172/1‑94 (MQ=255)
       gTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCt                                                                                     <  2:694853/94‑1 (MQ=255)
       gTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCt                                                                                     >  2:6753407/1‑94 (MQ=255)
        tAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCtt                                                                                    <  1:359219/94‑1 (MQ=255)
          aCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTtct                                                                                  >  1:3729196/1‑94 (MQ=255)
           cGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTtctc                                                                                 <  1:9954906/94‑1 (MQ=255)
            ggCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCg                                                                                >  2:4697681/1‑94 (MQ=255)
            ggCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCg                                                                                <  1:819845/94‑1 (MQ=255)
              cAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAt                                                                              >  2:6431841/1‑94 (MQ=255)
              cAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAt                                                                              >  1:10473197/1‑94 (MQ=255)
               aGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAtg                                                                             >  1:2138478/1‑94 (MQ=255)
               aGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAtg                                                                             >  1:9570549/1‑94 (MQ=255)
                gTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAtgg                                                                            >  1:2791897/1‑94 (MQ=255)
                 ttGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAtggt                                                                           >  2:7223856/1‑94 (MQ=255)
                     ccTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGtt                                                                       >  1:4039003/1‑94 (MQ=255)
                     ccTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGtt                                                                       <  1:10013582/94‑1 (MQ=255)
                      cTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGttt                                                                      >  1:5620302/1‑94 (MQ=255)
                        gACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGTTGGTGGGTTCt                                                                    >  1:7839181/1‑94 (MQ=255)
                        gACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCt                                                                    >  1:8409777/1‑94 (MQ=255)
                          ccTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTaa                                                                  <  2:6116524/94‑1 (MQ=255)
                          ccTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTaa                                                                  >  2:1229022/1‑94 (MQ=255)
                             ttgCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCt                                                               <  2:7356271/93‑1 (MQ=255)
                              tgCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTc                                                              <  2:1054201/94‑1 (MQ=255)
                                cTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCgg                                                            <  2:1587304/94‑1 (MQ=255)
                                cTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCgg                                                            <  1:8544926/94‑1 (MQ=255)
                                cTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCgg                                                            <  1:4891551/94‑1 (MQ=255)
                                cTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGCTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCgg                                                            >  1:1249282/1‑94 (MQ=255)
                                 ttGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGc                                                           <  2:822798/94‑1 (MQ=255)
                                  tgtgCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCt                                                          >  2:8385600/1‑94 (MQ=255)
                                  tgtgCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCt                                                          >  2:6652006/1‑94 (MQ=255)
                                  tgtgCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCt                                                          <  2:7448479/94‑1 (MQ=255)
                                   gtgCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCtt                                                         >  2:314095/1‑94 (MQ=255)
                                     gCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTaa                                                       >  1:734704/1‑94 (MQ=255)
                                      cAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAAGCTCGGCTTAAg                                                      >  2:705025/1‑94 (MQ=255)
                                      cAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAg                                                      <  1:6822024/94‑1 (MQ=255)
                                        gAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGcc                                                    <  2:7559648/94‑1 (MQ=255)
                                        gAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGcc                                                    >  1:2985096/1‑94 (MQ=255)
                                        gAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGcc                                                    <  1:6893061/94‑1 (MQ=255)
                                          aTTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAg                                                  >  1:7027751/1‑94 (MQ=255)
                                           ttCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGc                                                 <  1:268784/94‑1 (MQ=255)
                                           atCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGc                                                 <  2:549107/93‑1 (MQ=255)
                                            tCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGcc                                                <  1:8311543/94‑2 (MQ=255)
                                             cTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGccg                                               >  1:10351587/1‑92 (MQ=255)
                                             cTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTg                                               >  2:8077747/1‑94 (MQ=255)
                                               ttGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGAt                                             <  1:7445899/94‑1 (MQ=255)
                                                tGCCCAGTACGTACCGCTCTCTTCTCGTACGCTGGTGTTTATCCTTGGAGGCTTCTCGATGGTGGTTTCTAACTTCGGACTAAGACAGCCGATc                                            >  2:10094542/1‑94 (MQ=255)
                                                tGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATc                                            <  1:809923/94‑1 (MQ=255)
                                                 gCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATcc                                           >  2:3359938/1‑94 (MQ=255)
                                                 gCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATcc                                           >  1:5965265/1‑94 (MQ=255)
                                                 gCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATcc                                           <  1:5771047/94‑1 (MQ=255)
                                                  cccAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCa                                          <  2:4460088/94‑1 (MQ=255)
                                                   ccAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAg                                         >  1:4103024/1‑94 (MQ=255)
                                                   ccAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAg                                         <  1:1379439/94‑1 (MQ=255)
                                                   ccAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAg                                         >  1:6563298/1‑94 (MQ=255)
                                                    cAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGa                                        >  1:7305398/1‑94 (MQ=255)
                                                     aGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAt                                       >  2:5849013/1‑94 (MQ=255)
                                                     aGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAt                                       >  1:2058037/1‑94 (MQ=255)
                                                      gtacgtacCGCTCTTTTGTCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAtc                                      <  1:6082010/94‑1 (MQ=255)
                                                       tacgtacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACTTCGGCTTAAGCCAGCTGATCCAGAtct                                     <  1:1011900/94‑1 (MQ=255)
                                                       tacgtacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAtct                                     <  1:6372089/94‑1 (MQ=255)
                                                         cgtacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTcc                                   >  2:10038137/1‑94 (MQ=255)
                                                         cgtacCGCCCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCGAACCTCGGCTTAAGCCAGCCGATCCAGATCTcc                                   <  1:4821992/94‑1 (MQ=255)
                                                          gtacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCg                                  >  2:2115361/1‑94 (MQ=255)
                                                          gtacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCg                                  <  2:5074640/94‑1 (MQ=255)
                                                           tacCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGt                                 >  2:4925579/1‑94 (MQ=255)
                                                              cGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTAcc                              <  2:361434/94‑1 (MQ=255)
                                                              cGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTAcc                              >  2:2512563/1‑94 (MQ=255)
                                                               gCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCg                             <  2:949229/94‑1 (MQ=255)
                                                                 tctctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGt                           >  1:7602623/1‑94 (MQ=255)
                                                                   tctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGc                         >  2:3724893/1‑94 (MQ=255)
                                                                   tctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGc                         >  2:8747211/1‑94 (MQ=255)
                                                                   tctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGc                         >  2:779528/1‑94 (MQ=255)
                                                                    ctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCt                        >  2:7688935/1‑94 (MQ=255)
                                                                    ctTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCt                        <  2:3908882/94‑1 (MQ=255)
                                                                     ttATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTg                       >  2:4270561/1‑94 (MQ=255)
                                                                       aTCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGGTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGCGCCGAc                     >  1:4486889/1‑94 (MQ=255)
                                                                         cGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCg                   <  1:6239812/94‑1 (MQ=255)
                                                                         cGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCg                   >  2:8474717/1‑94 (MQ=255)
                                                                          gTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGc                  >  2:2283642/1‑94 (MQ=255)
                                                                           tACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCt                 <  1:3127331/94‑1 (MQ=255)
                                                                           tACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCt                 >  2:9007514/1‑94 (MQ=255)
                                                                              gCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTAtt              >  2:2961658/1‑94 (MQ=255)
                                                                              gCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTACTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTAtt              <  2:5268474/94‑1 (MQ=255)
                                                                               cTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTAttt             >  2:8881050/1‑94 (MQ=255)
                                                                               cTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTAttt             <  2:2557685/94‑1 (MQ=255)
                                                                                  gtgtTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATc          <  2:4075725/94‑1 (MQ=255)
                                                                                  gtgtTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATc          >  2:5590130/1‑94 (MQ=255)
                                                                                   tgtTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGTTGCTGACCGCTATTTATcc         >  1:1743854/1‑94 (MQ=255)
                                                                                   tgtTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATcc         <  2:7579899/94‑1 (MQ=255)
                                                                                      ttATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATccgcc      <  1:8691735/94‑1 (MQ=255)
                                                                                      ttATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATccgcc      <  2:9668077/94‑1 (MQ=255)
                                                                                       tATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATccgccg     >  1:3254650/1‑94 (MQ=255)
                                                                                       tATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATccgccg     <  1:8496259/94‑1 (MQ=255)
                                                                                       tATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATccgccg     <  1:9250561/94‑1 (MQ=255)
                                                                                        aTCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCgt    <  2:7848771/94‑1 (MQ=255)
                                                                                         tCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCgtg   >  2:860966/1‑94 (MQ=255)
                                                                                         tCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCgtg   <  1:8911341/94‑1 (MQ=255)
                                                                                          ccTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCgtgt  >  1:5406359/1‑94 (MQ=255)
                                                                                             |                                                                                          
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGT  >  NC_000913/419684‑419867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 203 total aligned reads displayed.
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATC  >  NC_000913/419684‑419870
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CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               >  SRR4302545.10024718/1‑94 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               <  SRR4302545.6994903/94‑1 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               >  SRR4302545.5914439/1‑94 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               <  SRR4302545.5621490/94‑1 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               >  SRR4302545.4870363/1‑94 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               >  SRR4302545.3894102/1‑94 (MQ=60)
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTT                                                                                               >  SRR4302545.3894101/1‑94 (MQ=60)
 TGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTG                                                                                              <  SRR4302545.850737/94‑1 (MQ=60)
 TGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTG                                                                                              >  SRR4302545.8255553/1‑94 (MQ=60)
 TGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTG                                                                                              >  SRR4302545.3037763/1‑94 (MQ=60)
 TGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTG                                                                                              <  SRR4302545.10506947/94‑1 (MQ=60)
  GCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGG                                                                                             <  SRR4302545.2471522/94‑1 (MQ=60)
  GCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGG                                                                                             >  SRR4302545.280074/1‑94 (MQ=60)
   CCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGC                                                                                            >  SRR4302545.3245108/1‑94 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           <  SRR4302545.8729077/94‑1 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           <  SRR4302545.4635285/94‑1 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           <  SRR4302545.5089809/94‑1 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           >  SRR4302545.3101555/1‑94 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           >  SRR4302545.6070953/1‑94 (MQ=60)
    CTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCG                                                                                           >  SRR4302545.7626743/1‑94 (MQ=60)
     TGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGG                                                                                          >  SRR4302545.3034458/1‑94 (MQ=60)
     TGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGG                                                                                          >  SRR4302545.10111982/1‑94 (MQ=60)
      GGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGC                                                                                         >  SRR4302545.9524174/1‑94 (MQ=60)
      GGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACACTGGTGTTTATCCTTGGCGGC                                                                                         >  SRR4302545.5443743/1‑94 (MQ=60)
       GTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCT                                                                                        <  SRR4302545.6704924/94‑1 (MQ=60)
       GTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCT                                                                                        <  SRR4302545.6260183/94‑1 (MQ=60)
        TAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTGTTATCGTACGCTGGTGTTTATCCTTGGCGGCTT                                                                                       >  SRR4302545.5722134/1‑94 (MQ=60)
        TAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTT                                                                                       <  SRR4302545.367017/94‑1 (MQ=60)
         AACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTC                                                                                      <  SRR4302545.7842261/94‑1 (MQ=60)
         AACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTC                                                                                      >  SRR4302545.8380185/1‑94 (MQ=60)
          acgggagtttgccctgcccgttgttgtggcagaattctttcccaggtcgttaccccccCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCT                                                                                     <  SRR4302545.2243743/36‑1 (MQ=60)
          ACGGCATGTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGGGTTTATCCGTGGCGGCTTCT                                                                                     >  SRR4302545.666407/1‑94 (MQ=60)
          ACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCT                                                                                     >  SRR4302545.3820879/1‑94 (MQ=60)
          ACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCT                                                                                     <  SRR4302545.1958708/94‑1 (MQ=60)
           CTGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTC                                                                                    <  SRR4302545.8661746/94‑1 (MQ=60)
           CGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTC                                                                                    <  SRR4302545.2811663/94‑1 (MQ=60)
           CGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTC                                                                                    <  SRR4302545.10250309/94‑1 (MQ=60)
           CGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTC                                                                                    >  SRR4302545.8904697/1‑94 (MQ=60)
            GGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCG                                                                                   <  SRR4302545.838227/94‑1 (MQ=60)
            GGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCG                                                                                   <  SRR4302545.402698/94‑1 (MQ=60)
            GGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCG                                                                                   >  SRR4302545.8149069/1‑94 (MQ=60)
            GGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCG                                                                                   >  SRR4302545.10471783/1‑94 (MQ=60)
              CAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAT                                                                                 >  SRR4302545.10781954/1‑94 (MQ=60)
              CAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGAT                                                                                 >  SRR4302545.10781955/1‑94 (MQ=60)
               AGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATG                                                                                >  SRR4302545.2190870/1‑94 (MQ=60)
                GTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGG                                                                               <  SRR4302545.10172211/94‑1 (MQ=60)
                GTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGG                                                                               >  SRR4302545.2859365/1‑94 (MQ=60)
                GTTGGCCTGACCTGTGCTTGGGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGG                                                                               <  SRR4302545.4165058/94‑1 (MQ=60)
                 TTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGT                                                                              <  SRR4302545.6206811/94‑1 (MQ=60)
                 TTGGCCTGACCTGTGCTTGTGCAGAATCCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGT                                                                              >  SRR4302545.10639334/1‑94 (MQ=60)
                  TGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTG                                                                             <  SRR4302545.3759477/94‑1 (MQ=60)
                  TGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTG                                                                             <  SRR4302545.6417634/94‑1 (MQ=60)
                  TGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTG                                                                             <  SRR4302545.10927705/94‑1 (MQ=60)
                   gaccgcACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGG                                                                            <  SRR4302545.289705/88‑1 (MQ=60)
                     CCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTT                                                                          >  SRR4302545.8826911/1‑94 (MQ=60)
                     CCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTT                                                                          >  SRR4302545.4140138/1‑94 (MQ=60)
                     CCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTT                                                                          >  SRR4302545.7731503/1‑94 (MQ=60)
                     CCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTT                                                                          >  SRR4302545.9816569/1‑94 (MQ=60)
                     CCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTT                                                                          <  SRR4302545.10310392/94‑1 (MQ=60)
                      CTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTT                                                                         >  SRR4302545.5398105/1‑94 (MQ=60)
                      CTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTT                                                                         >  SRR4302545.8467231/1‑94 (MQ=60)
                      CTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTT                                                                         >  SRR4302545.5769631/1‑94 (MQ=60)
                       TGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTC                                                                        <  SRR4302545.7656243/94‑1 (MQ=60)
                       TGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTC                                                                        >  SRR4302545.327701/1‑94 (MQ=60)
                       TGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTC                                                                        <  SRR4302545.5976895/94‑1 (MQ=60)
                        GACGTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGGGTTTATCCTTGGCGGCTTCTCCATAGTGGTTTCG                                                                       <  SRR4302545.2207701/94‑1 (MQ=60)
                        GACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGTTGGTGGGTTCT                                                                       >  SRR4302545.8061415/1‑94 (MQ=60)
                        GACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCT                                                                       >  SRR4302545.8985798/1‑94 (MQ=60)
                        GACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCT                                                                       >  SRR4302545.8985797/1‑94 (MQ=60)
                        GACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCT                                                                       >  SRR4302545.8653093/1‑94 (MQ=60)
                          CCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTTGATCGCGGTTTCTCA                                                                     >  SRR4302545.10190155/1‑94 (MQ=60)
                           CTGTGCTTGTGCAGAATTCTTTGTCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGCTTATCCTTGGCAGCTTCTCGATGGTGGTTTCTAAC                                                                    >  SRR4302545.4577832/1‑94 (MQ=60)
                           CTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAAC                                                                    >  SRR4302545.7266361/1‑94 (MQ=60)
                           CTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAAC                                                                    <  SRR4302545.9387744/94‑1 (MQ=60)
                            TGGGCTTGGGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACC                                                                   >  SRR4302545.1710972/1‑94 (MQ=60)
                             GTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCT                                                                  <  SRR4302545.3446920/94‑1 (MQ=60)
                              TGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTC                                                                 >  SRR4302545.9377357/1‑94 (MQ=60)
                               GCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCG                                                                >  SRR4302545.6821176/1‑94 (MQ=60)
                               GCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCG                                                                <  SRR4302545.7051620/94‑1 (MQ=60)
                               GCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCG                                                                <  SRR4302545.7051621/94‑1 (MQ=60)
                                CTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGG                                                               <  SRR4302545.5015799/94‑1 (MQ=60)
                                CTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGG                                                               >  SRR4302545.3912280/1‑94 (MQ=60)
                                CTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGG                                                               <  SRR4302545.8791980/94‑1 (MQ=60)
                                CTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGCTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGG                                                               >  SRR4302545.1277346/1‑94 (MQ=60)
                                CTTGGGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGG                                                               <  SRR4302545.8063746/94‑1 (MQ=60)
                                   GTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTT                                                            >  SRR4302545.5804852/1‑94 (MQ=60)
                                   GTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTT                                                            <  SRR4302545.8224509/94‑1 (MQ=60)
                                     GCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAA                                                          >  SRR4302545.751232/1‑94 (MQ=60)
                                      CAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAG                                                         <  SRR4302545.7009484/94‑1 (MQ=60)
                                      CAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAG                                                         >  SRR4302545.2420012/1‑94 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       <  SRR4302545.7082713/94‑1 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       >  SRR4302545.7353005/1‑94 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       >  SRR4302545.3057847/1‑94 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       <  SRR4302545.10084707/94‑1 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       <  SRR4302545.10084706/94‑1 (MQ=60)
                                        GAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCC                                                       <  SRR4302545.2433727/94‑1 (MQ=60)
                                         AATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCA                                                      <  SRR4302545.1357700/94‑1 (MQ=60)
                                          ATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAG                                                     >  SRR4302545.7221773/1‑94 (MQ=60)
                                          ATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAG                                                     >  SRR4302545.7221771/1‑94 (MQ=60)
                                          ATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAG                                                     <  SRR4302545.6205278/94‑1 (MQ=60)
                                          ATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAG                                                     <  SRR4302545.3331065/94‑1 (MQ=60)
                                           TTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGC                                                    <  SRR4302545.3757734/94‑1 (MQ=60)
                                           TTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGC                                                    <  SRR4302545.274341/94‑1 (MQ=60)
                                            TCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCC                                                   <  SRR4302545.8552393/94‑1 (MQ=60)
                                            TCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCC                                                   <  SRR4302545.5712916/94‑1 (MQ=60)
                                             CTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCG                                                  >  SRR4302545.10656693/1‑94 (MQ=60)
                                               TTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGAT                                                <  SRR4302545.7656695/94‑1 (MQ=60)
                                               TTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGAT                                                <  SRR4302545.4668723/94‑1 (MQ=60)
                                                TGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATC                                               >  SRR4302545.487366/1‑94 (MQ=60)
                                                TGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATC                                               >  SRR4302545.1772759/1‑94 (MQ=60)
                                                TGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATC                                               <  SRR4302545.828104/94‑1 (MQ=60)
                                                TGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATC                                               <  SRR4302545.512301/94‑1 (MQ=60)
                                                 GCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCC                                              <  SRR4302545.5926139/94‑1 (MQ=60)
                                                 GCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCC                                              >  SRR4302545.6126198/1‑94 (MQ=60)
                                                   CCAGTCCGTACCTCTCTATTATCGTATGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTTTAACCTCGGCTTAAGCCAGATGATCCAG                                            <  SRR4302545.1410361/94‑1 (MQ=60)
                                                   CCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAG                                            <  SRR4302545.1410360/94‑1 (MQ=60)
                                                   CCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAG                                            >  SRR4302545.4205723/1‑94 (MQ=60)
                                                   CCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAG                                            <  SRR4302545.10777213/94‑1 (MQ=60)
                                                   CCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAG                                            >  SRR4302545.6742882/1‑94 (MQ=60)
                                                    CAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGTGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGA                                           >  SRR4302545.7510254/1‑94 (MQ=60)
                                                    CAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGA                                           >  SRR4302545.4600526/1‑94 (MQ=60)
                                                    CAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGA                                           >  SRR4302545.7510253/1‑94 (MQ=60)
                                                     AGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCCGAT                                          >  SRR4302545.10261904/1‑94 (MQ=60)
                                                     AGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGAT                                          >  SRR4302545.3411902/1‑94 (MQ=60)
                                                     AGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAT                                          >  SRR4302545.10384089/1‑94 (MQ=60)
                                                     AGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGAT                                          >  SRR4302545.2108740/1‑94 (MQ=60)
                                                     AGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTGCTAACCTCGGCTTAAGCCAGCTGATCCAGAT                                          <  SRR4302545.7547467/94‑1 (MQ=60)
                                                      GTACGTACCGCTCTTTTGTCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATC                                         <  SRR4302545.6247197/94‑1 (MQ=60)
                                                      GTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGCTC                                         >  SRR4302545.8501666/1‑94 (MQ=60)
                                                       TACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTTACATCGGCTTAAGCCAGCCGATGGAGATCT                                        >  SRR4302545.4199834/1‑94 (MQ=60)
                                                       TACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACTTCGGCTTAAGCCAGCTGATCCAGATCT                                        <  SRR4302545.1034251/94‑1 (MQ=60)
                                                       TACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCT                                        >  SRR4302545.2123495/1‑94 (MQ=60)
                                                       TACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCT                                        <  SRR4302545.6546243/94‑1 (MQ=60)
                                                         CGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCC                                      <  SRR4302545.5452900/94‑1 (MQ=60)
                                                         CGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCC                                      <  SRR4302545.5452899/94‑1 (MQ=60)
                                                         CGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCC                                      >  SRR4302545.2036743/1‑94 (MQ=60)
                                                         CGTACCGCCCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCGAACCTCGGCTTAAGCCAGCCGATCCAGATCTCC                                      <  SRR4302545.4945105/94‑1 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATtcagttcgcgg                                     >  SRR4302545.6461281/1‑83 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCG                                     <  SRR4302545.8377890/94‑1 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCG                                     >  SRR4302545.876616/1‑94 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCG                                     >  SRR4302545.6461282/1‑94 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCG                                     >  SRR4302545.4961037/1‑94 (MQ=60)
                                                          GTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCG                                     >  SRR4302545.8630995/1‑94 (MQ=60)
                                                            ACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTA                                   <  SRR4302545.5722227/94‑1 (MQ=60)
                                                            ACCGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTA                                   >  SRR4302545.4084233/1‑94 (MQ=60)
                                                              CGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACC                                 <  SRR4302545.2859967/94‑1 (MQ=60)
                                                              CGCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACC                                 >  SRR4302545.10787569/1‑94 (MQ=60)
                                                               GCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCG                                <  SRR4302545.5009793/94‑1 (MQ=60)
                                                               GCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCG                                >  SRR4302545.7895995/1‑94 (MQ=60)
                                                               GCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCG                                >  SRR4302545.1380628/1‑94 (MQ=60)
                                                               CCTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCG                                <  SRR4302545.2119816/94‑1 (MQ=60)
                                                                CTCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGG                               >  SRR4302545.10609/1‑94 (MQ=60)
                                                                 TCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGT                              >  SRR4302545.7817684/1‑94 (MQ=60)
                                                                 TCTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGT                              >  SRR4302545.7817683/1‑94 (MQ=60)
                                                                  CTCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTG                             >  SRR4302545.3435064/1‑94 (MQ=60)
                                                                   TCTTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGCTCTCCGTACCGGTGC                            >  SRR4302545.2997236/1‑94 (MQ=60)
                                                                     TTATGGTACGCTGGTGTTTATCCTTGTCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTG                          <  SRR4302545.85123/94‑1 (MQ=60)
                                                                     TTATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTG                          >  SRR4302545.6878023/1‑94 (MQ=60)
                                                                      TATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGA                         >  SRR4302545.8520704/1‑94 (MQ=60)
                                                                       ATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGAC                        <  SRR4302545.10509795/94‑1 (MQ=60)
                                                                       ATCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGGTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGCGCCGAC                        >  SRR4302545.4601542/1‑94 (MQ=60)
                                                                        TCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACC                       <  SRR4302545.3132761/94‑1 (MQ=60)
                                                                        TCGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACC                       >  SRR4302545.10283418/1‑94 (MQ=60)
                                                                         CGTACTCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCG                      <  SRR4302545.6409880/94‑1 (MQ=60)
                                                                         CGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCG                      <  SRR4302545.7592807/94‑1 (MQ=60)
                                                                         CGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCG                      <  SRR4302545.6409882/94‑1 (MQ=60)
                                                                         CGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCG                      >  SRR4302545.6226313/1‑94 (MQ=60)
                                                                         CGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCG                      <  SRR4302545.8769544/94‑1 (MQ=60)
                                                                         CGTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCG                      <  SRR4302545.8769543/94‑1 (MQ=60)
                                                                          GTACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGC                     >  SRR4302545.184937/1‑94 (MQ=60)
                                                                           TACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCT                    >  SRR4302545.9743092/1‑94 (MQ=60)
                                                                           TACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCT                    <  SRR4302545.3204472/94‑1 (MQ=60)
                                                                           TACGCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCT                    >  SRR4302545.10287323/1‑94 (MQ=60)
                                                                              GCTGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATT                 >  SRR4302545.5856879/1‑94 (MQ=60)
                                                                                TGGTGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTA               >  SRR4302545.8040046/1‑94 (MQ=60)
                                                                                  GTGTTTATCCTTGGCGCCTTCTGGATGGTGGTTTCTAACCTCGCTTTAAGCCGGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATC             <  SRR4302545.10370504/94‑1 (MQ=60)
                                                                                   TGTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGTTGCTGACCGCTATTTATCC            >  SRR4302545.1785558/1‑94 (MQ=60)
                                                                                    GTTTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCG           >  SRR4302545.10375548/1‑94 (MQ=60)
                                                                                      TTATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCC         <  SRR4302545.8943835/94‑1 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        <  SRR4302545.8741788/94‑1 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        <  SRR4302545.8741789/94‑1 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        <  SRR4302545.7403602/94‑1 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        >  SRR4302545.3334536/1‑94 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        <  SRR4302545.9521780/94‑1 (MQ=60)
                                                                                       TATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        <  SRR4302545.5944142/94‑1 (MQ=60)
                                                                                       TATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCG        >  SRR4302545.7188500/1‑94 (MQ=60)
                                                                                       TATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCCGTGCGGACCGCTATTTATCCGCCG        >  SRR4302545.7188501/1‑94 (MQ=60)
                                                                                        ATCCTTGGCGGCTTCTCGGTGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGCACCGGCGCTGAACGCTTTTTATCCGCCGT       >  SRR4302545.8264183/1‑94 (MQ=60)
                                                                                        ATCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGT       >  SRR4302545.10120915/1‑94 (MQ=60)
                                                                                         TCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCTAGCTGATCCAGATCTCCGTACCGGTTCTGACCGCTATTTATCCGCCGTG      <  SRR4302545.9170391/94‑1 (MQ=60)
                                                                                         TCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTG      >  SRR4302545.16359/1‑94 (MQ=60)
                                                                                         TCCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTG      <  SRR4302545.9170392/94‑1 (MQ=60)
                                                                                          CCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGT     <  SRR4302545.4454523/94‑1 (MQ=60)
                                                                                          CCTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGT     >  SRR4302545.5547396/1‑94 (MQ=60)
                                                                                           CTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTA    <  SRR4302545.5038787/94‑1 (MQ=60)
                                                                                           CTTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTA    >  SRR4302545.1178509/1‑94 (MQ=60)
                                                                                            TTGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTAT   <  SRR4302545.6602667/94‑1 (MQ=60)
                                                                                             TGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATC  >  SRR4302545.5894831/1‑94 (MQ=60)
                                                                                             TGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCCGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATC  >  SRR4302545.436276/1‑94 (MQ=60)
                                                                                             TGGCGGCTTCGCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATC  <  SRR4302545.2727093/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATC  >  NC_000913/419684‑419870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: