Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	431,523	T→C	intergenic (‑286/+13)	tsx ← / ← yajI	Tsx/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	431,523	0	T	C	99.3%	1500.5 / ‑2.9	443	intergenic (‑286/+13)	tsx/yajI	Tsx/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (238/201); total (239/204)
Fisher's exact test for biased strand distribution p-value = 5.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01

Only 100 of 466 total aligned reads displayed.

CGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGG  >  NC_000913/431432‑431613

cGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGccc                                                                                          >  2:1703228/1‑94 (MQ=255)

cGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGccc                                                                                          >  2:9418446/1‑94 (MQ=255)

cGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGccc                                                                                          >  1:3256951/1‑94 (MQ=255)

 gCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGcccc                                                                                         <  2:1494538/94‑1 (MQ=255)

 gCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGcccc                                                                                         >  1:5756192/1‑94 (MQ=255)

 gCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGcccc                                                                                         <  1:5223707/94‑1 (MQ=255)

 gCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGcccc                                                                                         <  2:4497432/94‑1 (MQ=255)

 gCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGcccc                                                                                         <  1:2566738/94‑1 (MQ=255)

  cccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCg                                                                                        >  2:4668333/1‑94 (MQ=255)

  cccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCg                                                                                        >  2:9020002/1‑94 (MQ=255)

  cccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCg                                                                                        >  2:8577579/1‑94 (MQ=255)

   ccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGa                                                                                       >  2:4773783/1‑94 (MQ=255)

   ccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGa                                                                                       <  2:1950548/94‑1 (MQ=255)

   ccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGa                                                                                       >  1:6838857/1‑94 (MQ=255)

   ccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGa                                                                                       >  2:7429944/1‑94 (MQ=255)

   ccTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGa                                                                                       >  1:2777175/1‑94 (MQ=255)

    cTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAACATCGCCCCGaa                                                                                      >  1:5937445/1‑94 (MQ=255)

    cTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGaa                                                                                      >  1:4968633/1‑94 (MQ=255)

       gttgCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATa                                                                                   >  2:2910423/1‑94 (MQ=255)

        ttgCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATAc                                                                                  <  1:1549058/94‑1 (MQ=255)

         tgCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACg                                                                                 <  2:1188068/94‑1 (MQ=255)

         tgCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACg                                                                                 >  2:5251249/1‑94 (MQ=255)

          gCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGt                                                                                <  1:768387/94‑1 (MQ=255)

          gCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGt                                                                                >  2:255945/1‑94 (MQ=255)

          gCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGt                                                                                >  2:6843548/1‑94 (MQ=255)

           cAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGtt                                                                               >  2:6173037/1‑94 (MQ=255)

              aCTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTAc                                                                            <  1:10084388/94‑1 (MQ=255)

               cTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACt                                                                           <  1:10511839/94‑1 (MQ=255)

                ttttACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTg                                                                          >  1:1161065/1‑94 (MQ=255)

                  ttACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCa                                                                        >  2:10455696/1‑94 (MQ=255)

                       aTCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACa                                                                   <  1:7248299/94‑1 (MQ=255)

                        tCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAg                                                                  <  2:4078696/94‑1 (MQ=255)

                         cAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAgg                                                                 >  2:8134199/1‑94 (MQ=255)

                          aaTCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGt                                                                >  2:5134370/1‑94 (MQ=255)

                          aaTCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGt                                                                <  2:6434005/94‑1 (MQ=255)

                           aTCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGtt                                                               <  1:2407078/94‑1 (MQ=255)

                           aTCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACCGCATAACAGGtt                                                               <  2:3127262/94‑1 (MQ=255)

                            tCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTg                                                              <  1:1611594/94‑1 (MQ=255)

                             ccAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGa                                                             >  2:689415/1‑94 (MQ=255)

                              cAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGaa                                                            >  1:720250/1‑94 (MQ=255)

                              cAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGaa                                                            >  1:4304423/1‑94 (MQ=255)

                              cAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGaa                                                            >  1:8399710/1‑94 (MQ=255)

                               aGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAt                                                           <  1:8311279/94‑1 (MQ=255)

                               aGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAt                                                           >  1:5144626/1‑94 (MQ=255)

                                ggTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATg                                                          <  1:8123660/94‑1 (MQ=255)

                                ggTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATg                                                          >  1:10562155/1‑94 (MQ=255)

                                ggTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATg                                                          <  2:545684/94‑1 (MQ=255)

                                  tGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAACATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTc                                                        >  1:7941733/1‑94 (MQ=255)

                                   gATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCg                                                       <  2:4936809/94‑1 (MQ=255)

                                    aTGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGt                                                      >  1:6143990/1‑94 (MQ=255)

                                        aaGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGAt                                                  >  1:5499975/1‑94 (MQ=255)

                                        aaGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGAt                                                  <  2:7172494/94‑1 (MQ=255)

                                         aGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATa                                                 <  2:1390068/94‑1 (MQ=255)

                                          gCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATAc                                                <  2:6039205/94‑1 (MQ=255)

                                            agagTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGt                                              >  1:1020774/1‑94 (MQ=255)

                                            agagTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGt                                              >  1:2463258/1‑94 (MQ=255)

                                             gagTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTa                                             <  1:6978685/94‑1 (MQ=255)

                                              agTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTAc                                            <  2:8832096/94‑1 (MQ=255)

                                              agTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTAc                                            >  1:7364441/1‑94 (MQ=255)

                                              agTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTAc                                            <  2:6640457/94‑1 (MQ=255)

                                                tAACAAAATGACGGGGAAAGATGTTGCGGGGCGCACAAAATCGCCCCGAAATACGTTTACTGAATAACAGGTTGAATGTCGTGGGTACGTACaa                                          <  2:3433857/94‑1 (MQ=255)

                                                 aaCAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACaaa                                         >  1:3130968/1‑94 (MQ=255)

                                                  aCAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAg                                        <  2:3972526/94‑1 (MQ=255)

                                                   cAAAATGACGGGGAAATATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGc                                       <  2:5824750/94‑1 (MQ=255)

                                                    aaaaTGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGcc                                      >  2:9101732/1‑94 (MQ=255)

                                                     aaaTGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCt                                     <  1:4863827/94‑1 (MQ=255)

                                                       aTGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTaa                                   <  1:6372084/94‑1 (MQ=255)

                                                       aTGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTaa                                   <  2:2354671/94‑1 (MQ=255)

                                                       aTGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTaa                                   >  1:9326679/1‑94 (MQ=255)

                                                        tGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAAc                                  <  1:194040/94‑1 (MQ=255)

                                                        tGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAAc                                  <  1:9604308/94‑1 (MQ=255)

                                                         gACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACt                                 <  1:997689/94‑1 (MQ=255)

                                                          aCGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTg                                <  2:6776720/94‑1 (MQ=255)

                                                          aCGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTg                                >  2:10527695/1‑94 (MQ=255)

                                                           cGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGa                               >  1:9888647/1‑94 (MQ=255)

                                                             gggAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATc                             >  1:3584862/1‑94 (MQ=255)

                                                               gAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCca                           >  2:3674087/1‑94 (MQ=255)

                                                               gAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCca                           <  1:6915332/94‑1 (MQ=255)

                                                                  aGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAg                        <  1:1802836/94‑1 (MQ=255)

                                                                  aGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAg                        >  1:2887742/1‑94 (MQ=255)

                                                                  aGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAg                        >  2:8027971/1‑94 (MQ=255)

                                                                    aTGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGaa                      <  1:1454169/94‑1 (MQ=255)

                                                                     tGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGaaa                     >  1:4771965/1‑94 (MQ=255)

                                                                      gTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAt                    >  2:7746233/1‑94 (MQ=255)

                                                                           gggACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCt               <  2:3813563/94‑1 (MQ=255)

                                                                              tcGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTa            >  1:4606093/2‑94 (MQ=255)

                                                                                  acaAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTg        >  1:6709316/1‑94 (MQ=255)

                                                                                  acaAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTg        >  1:3707499/1‑94 (MQ=255)

                                                                                  acaAAATCGCCCCGAAATACGTTTACTCGATAACAGGGTGAATGTCGTTGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTg        <  2:3487350/94‑1 (MQ=255)

                                                                                   caAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGt       >  2:9684743/1‑94 (MQ=255)

                                                                                    aaaaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTa      >  1:8781462/1‑94 (MQ=255)

                                                                                    aaaaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTa      <  1:224398/94‑1 (MQ=255)

                                                                                     aaaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTaa     <  1:6521822/94‑1 (MQ=255)

                                                                                     aaaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTaa     >  1:8983952/1‑94 (MQ=255)

                                                                                      aaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAAc    <  1:4008714/94‑1 (MQ=255)

                                                                                      aaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAAc    <  2:82977/94‑1 (MQ=255)

                                                                                      aaTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAAc    <  2:2677769/94‑1 (MQ=255)

                                                                                       aTCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACg   <  2:7040635/94‑1 (MQ=255)

                                                                                        tCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACgg  >  2:3596275/1‑94 (MQ=255)

                                                                                        tCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACgg  <  2:4383812/94‑1 (MQ=255)

CGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGG  >  NC_000913/431432‑431613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 246 total aligned reads displayed.

TTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGGAAT  >  NC_000913/431430‑431616

TTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGC                                                                                               >  SRR4302545.3024886/1‑94 (MQ=60)

  CGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCC                                                                                             >  SRR4302545.4832273/1‑94 (MQ=60)

   tcccgTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACAGGGAAAAATATTGCGGGACGCATAAAAACGCCCC                                                                                            <  SRR4302545.7485269/89‑1 (MQ=60)

   GCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCC                                                                                            <  SRR4302545.5358330/94‑1 (MQ=60)

   GCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCC                                                                                            >  SRR4302545.5910804/1‑94 (MQ=60)

   GCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCC                                                                                            >  SRR4302545.5348663/1‑94 (MQ=60)

    CCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCG                                                                                           <  SRR4302545.9813405/94‑1 (MQ=60)

     CCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGA                                                                                          >  SRR4302545.657994/1‑94 (MQ=60)

     CCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGA                                                                                          >  SRR4302545.7026733/1‑94 (MQ=60)

     CCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGA                                                                                          >  SRR4302545.10441093/1‑94 (MQ=60)

     CCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGA                                                                                          >  SRR4302545.4930108/1‑94 (MQ=60)

      CTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAACATCGCCCCGAA                                                                                         >  SRR4302545.6097644/1‑94 (MQ=60)

      CTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAA                                                                                         >  SRR4302545.5094481/1‑94 (MQ=60)

       TTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAA                                                                                        >  SRR4302545.2550213/1‑94 (MQ=60)

         GTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATA                                                                                      <  SRR4302545.9091179/94‑1 (MQ=60)

         GTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATA                                                                                      >  SRR4302545.3320384/1‑94 (MQ=60)

         GTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATA                                                                                      <  SRR4302545.7320938/94‑1 (MQ=60)

          TTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATAC                                                                                     <  SRR4302545.1585455/94‑1 (MQ=60)

           TGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGCAAGATGTTGCGGGGCGCACAAAATCGCCCCGAAATACG                                                                                    >  SRR4302545.10537585/1‑94 (MQ=60)

           TGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACG                                                                                    >  SRR4302545.8141718/1‑94 (MQ=60)

            GCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGT                                                                                   >  SRR4302545.5004383/1‑94 (MQ=60)

            GCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGT                                                                                   <  SRR4302545.785659/94‑1 (MQ=60)

             CAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTT                                                                                  <  SRR4302545.2805506/94‑1 (MQ=60)

             CAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTT                                                                                  >  SRR4302545.1970596/1‑94 (MQ=60)

              AAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTT                                                                                 >  SRR4302545.5762524/1‑94 (MQ=60)

                ACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTAC                                                                               <  SRR4302545.7167127/94‑1 (MQ=60)

                ACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTAC                                                                               <  SRR4302545.10382668/94‑1 (MQ=60)

                ACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTAC                                                                               <  SRR4302545.6541841/94‑1 (MQ=60)

                 CTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACT                                                                              <  SRR4302545.10821614/94‑1 (MQ=60)

                 CTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACT                                                                              <  SRR4302545.3614250/94‑1 (MQ=60)

                  TTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTG                                                                             >  SRR4302545.8717001/1‑94 (MQ=60)

                  TTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTG                                                                             <  SRR4302545.143868/94‑1 (MQ=60)

                  TTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTG                                                                             >  SRR4302545.1186657/1‑94 (MQ=60)

                  TTTTACTATCAATCCAGGTGATGTAAGCAGAGTAAAAAAATGACGGGGAAAGAGGTTGGGGGACGCACAAAATGGCCCCGAAATAGGTTTAtgg                                                                             >  SRR4302545.1186658/1‑91 (MQ=60)

                     TACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCAT                                                                          >  SRR4302545.2422891/1‑94 (MQ=60)

                       CTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAA                                                                        >  SRR4302545.6893110/1‑94 (MQ=60)

                       CTATCAATCCAGGGGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAA                                                                        >  SRR4302545.8147471/1‑94 (MQ=60)

                        TATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGCGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAAC                                                                       <  SRR4302545.332207/94‑1 (MQ=60)

                         ATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACA                                                                      <  SRR4302545.6955062/94‑1 (MQ=60)

                         ATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACA                                                                      <  SRR4302545.5155904/94‑1 (MQ=60)

                          TCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAG                                                                     >  SRR4302545.6387744/1‑94 (MQ=60)

                          TCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAG                                                                     <  SRR4302545.5844777/94‑1 (MQ=60)

                           CAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGG                                                                    >  SRR4302545.2933607/1‑94 (MQ=60)

                             ATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTT                                                                  <  SRR4302545.2465429/94‑1 (MQ=60)

                              TCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTG                                                                 >  SRR4302545.1178692/1‑94 (MQ=60)

                              TCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTG                                                                 <  SRR4302545.1649879/94‑1 (MQ=60)

                              TCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTG                                                                 >  SRR4302545.1178691/1‑94 (MQ=60)

                              TCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTGGCGGGACGAACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTG                                                                 <  SRR4302545.1649877/94‑1 (MQ=60)

                               CCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGA                                                                >  SRR4302545.4634893/1‑94 (MQ=60)

                               CCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGA                                                                >  SRR4302545.7477148/1‑94 (MQ=60)

                               CCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGA                                                                >  SRR4302545.3220105/1‑94 (MQ=60)

                                CAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAA                                                               >  SRR4302545.8642792/1‑94 (MQ=60)

                                CAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAA                                                               >  SRR4302545.736447/1‑94 (MQ=60)

                                CAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAA                                                               >  SRR4302545.23127/1‑94 (MQ=60)

                                CAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAA                                                               >  SRR4302545.4412817/1‑94 (MQ=60)

                                CAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTCGAA                                                               <  SRR4302545.9156659/94‑1 (MQ=60)

                                 ATGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              <  SRR4302545.1814137/94‑1 (MQ=60)

                                 ATGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              <  SRR4302545.1814487/94‑1 (MQ=60)

                                 AGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              <  SRR4302545.7117976/94‑1 (MQ=60)

                                 AGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              >  SRR4302545.5276805/1‑94 (MQ=60)

                                 AGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              <  SRR4302545.8552125/94‑1 (MQ=60)

                                 AGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAAT                                                              <  SRR4302545.8552124/94‑1 (MQ=60)

                                  GGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATG                                                             >  SRR4302545.10873280/1‑94 (MQ=60)

                                  GGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATG                                                             <  SRR4302545.8358198/94‑1 (MQ=60)

                                   GTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGT                                                            <  SRR4302545.9317236/94‑1 (MQ=60)

                                   GTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGC                                                            >  SRR4302545.6759986/1‑94 (MQ=60)

                                    TGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAACATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTC                                                           >  SRR4302545.8167371/1‑94 (MQ=60)

                                    TGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTC                                                           <  SRR4302545.4846282/94‑1 (MQ=60)

                                    TGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTC                                                           >  SRR4302545.2549540/1‑94 (MQ=60)

                                    TGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTC                                                           <  SRR4302545.6208846/94‑1 (MQ=60)

                                     GATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCG                                                          <  SRR4302545.5059522/94‑1 (MQ=60)

                                     GATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCG                                                          >  SRR4302545.7143781/1‑94 (MQ=60)

                                     GATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCG                                                          >  SRR4302545.853319/1‑94 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         >  SRR4302545.6311091/1‑94 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         <  SRR4302545.6242642/94‑1 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         >  SRR4302545.10137589/1‑94 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         >  SRR4302545.10282455/1‑94 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         <  SRR4302545.9750605/94‑1 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGT                                                         <  SRR4302545.2493360/94‑1 (MQ=60)

                                      ATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGG                                                         >  SRR4302545.8255089/1‑94 (MQ=60)

                                        GTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGG                                                       <  SRR4302545.3155207/94‑1 (MQ=60)

                                          AAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGAT                                                     >  SRR4302545.5644841/1‑94 (MQ=60)

                                          AAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGAT                                                     <  SRR4302545.10189549/94‑1 (MQ=60)

                                           AGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATA                                                    >  SRR4302545.10560763/1‑94 (MQ=60)

                                           AGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATA                                                    <  SRR4302545.1340979/94‑1 (MQ=60)

                                           AGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATA                                                    >  SRR4302545.3746820/1‑94 (MQ=60)

                                             CAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACG                                                  >  SRR4302545.7422692/1‑94 (MQ=60)

                                             CAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACG                                                  >  SRR4302545.7422691/1‑94 (MQ=60)

                                             CAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACG                                                  <  SRR4302545.5355989/94‑1 (MQ=60)

                                              AGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGT                                                 <  SRR4302545.2342165/94‑1 (MQ=60)

                                              AGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGT                                                 >  SRR4302545.9869694/1‑94 (MQ=60)

                                              AGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGT                                                 >  SRR4302545.1043246/1‑94 (MQ=60)

                                              AGAGTAACAAAATGACGGGGAAAGATGTTGCGGGAAGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGT                                                 >  SRR4302545.1114017/1‑94 (MQ=60)

                                               GAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTA                                                <  SRR4302545.7171132/94‑1 (MQ=60)

                                                AGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTAC                                               >  SRR4302545.7571772/1‑94 (MQ=60)

                                                AGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTAC                                               >  SRR4302545.7571773/1‑94 (MQ=60)

                                                 GTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACA                                              <  SRR4302545.3058385/94‑1 (MQ=60)

                                                 GTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACA                                              >  SRR4302545.6203290/1‑94 (MQ=60)

                                                  GAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAA                                             <  SRR4302545.2684702/94‑1 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACCAA                                            >  SRR4302545.4912849/1‑94 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            >  SRR4302545.8274409/1‑94 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            >  SRR4302545.7938381/1‑94 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            <  SRR4302545.5934095/94‑1 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            <  SRR4302545.9940365/94‑1 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            <  SRR4302545.3205347/94‑1 (MQ=60)

                                                   AACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAA                                            >  SRR4302545.4267129/1‑94 (MQ=60)

                                                    ACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAG                                           <  SRR4302545.2779274/94‑1 (MQ=60)

                                                     CAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGC                                          <  SRR4302545.8450118/94‑1 (MQ=60)

                                                      AAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCC                                         <  SRR4302545.1962872/94‑1 (MQ=60)

                                                      AAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCC                                         >  SRR4302545.3855968/1‑94 (MQ=60)

                                                      AAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCC                                         >  SRR4302545.7049071/1‑94 (MQ=60)

                                                      AAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCC                                         <  SRR4302545.2216445/94‑1 (MQ=60)

                                                        AATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTA                                       >  SRR4302545.10257382/1‑94 (MQ=60)

                                                         ATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAA                                      >  SRR4302545.1613343/1‑94 (MQ=60)

                                                         ATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAA                                      >  SRR4302545.9600135/1‑94 (MQ=60)

                                                         ATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAA                                      <  SRR4302545.5133172/94‑1 (MQ=60)

                                                         ATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACACACAAAGCCTAA                                      >  SRR4302545.1613342/1‑94 (MQ=60)

                                                          TGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAAC                                     <  SRR4302545.198120/94‑1 (MQ=60)

                                                          TGACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAAC                                     <  SRR4302545.9887286/94‑1 (MQ=60)

                                                            ACGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTG                                   <  SRR4302545.286251/94‑1 (MQ=60)

                                                             CGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGGCTAACTGA                                  >  SRR4302545.10182454/1‑94 (MQ=60)

                                                             CGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGA                                  >  SRR4302545.10182457/1‑94 (MQ=60)

                                                             CGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGA                                  >  SRR4302545.7783218/1‑94 (MQ=60)

                                                             CGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGA                                  >  SRR4302545.7317452/1‑94 (MQ=60)

                                                             CGGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGA                                  >  SRR4302545.2737609/1‑94 (MQ=60)

                                                              GGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGAT                                 >  SRR4302545.2973138/1‑94 (MQ=60)

                                                              GGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGAT                                 >  SRR4302545.321611/1‑94 (MQ=60)

                                                              GGGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGAT                                 >  SRR4302545.4963031/1‑94 (MQ=60)

                                                               GGGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATC                                >  SRR4302545.3672366/1‑94 (MQ=60)

                                                                GGACAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCC                               <  SRR4302545.1689948/94‑1 (MQ=60)

                                                                GGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCC                               >  SRR4302545.10193444/1‑94 (MQ=60)

                                                                GGAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCC                               >  SRR4302545.5944558/1‑94 (MQ=60)

                                                                 gttagatgtggcggtactCACAAAATCGCCCCGAAATACTTTTACTGCATAACTGGTTTAATGTCGTGGATACGTACAAAGTCTAACAGATCTA                              >  SRR4302545.9660177/19‑94 (MQ=51)

                                                                 GAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCA                              >  SRR4302545.7412106/1‑94 (MQ=60)

                                                                 GAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCA                              <  SRR4302545.7105871/94‑1 (MQ=60)

                                                                 GAAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCA                              >  SRR4302545.5038533/1‑94 (MQ=60)

                                                                  AAAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCAC                             <  SRR4302545.3534289/94‑1 (MQ=60)

                                                                   AAGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACA                            >  SRR4302545.7174365/1‑94 (MQ=60)

                                                                    AGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAG                           >  SRR4302545.2957686/1‑94 (MQ=60)

                                                                    AGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAG                           <  SRR4302545.1846428/94‑1 (MQ=60)

                                                                    AGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAG                           >  SRR4302545.7511984/1‑94 (MQ=60)

                                                                    AGATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAA                           >  SRR4302545.8263367/1‑94 (MQ=60)

                                                                     GATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGA                          >  SRR4302545.1033036/1‑94 (MQ=60)

                                                                     GATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGA                          <  SRR4302545.2571475/94‑1 (MQ=60)

                                                                      ATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAA                         <  SRR4302545.2032227/94‑1 (MQ=60)

                                                                      ATGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAA                         <  SRR4302545.7679176/94‑1 (MQ=60)

                                                                       TGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAA                        >  SRR4302545.4195743/1‑94 (MQ=60)

                                                                       TGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAA                        >  SRR4302545.4893950/1‑94 (MQ=60)

                                                                       TGTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAA                        >  SRR4302545.6278804/1‑94 (MQ=60)

                                                                        GTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAT                       <  SRR4302545.1515073/94‑1 (MQ=60)

                                                                        GTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAT                       <  SRR4302545.1515072/94‑1 (MQ=60)

                                                                        GTTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCAAAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAT                       <  SRR4302545.5165699/94‑1 (MQ=60)

                                                                        GGTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAT                       <  SRR4302545.8608986/94‑1 (MQ=60)

                                                                         TTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATC                      <  SRR4302545.5424009/94‑1 (MQ=60)

                                                                         TTGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATC                      >  SRR4302545.3610206/1‑94 (MQ=60)

                                                                          TGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCC                     <  SRR4302545.5436990/94‑1 (MQ=60)

                                                                          TGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCC                     <  SRR4302545.5057395/94‑1 (MQ=60)

                                                                          TGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCC                     <  SRR4302545.6474919/94‑1 (MQ=60)

                                                                          TGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCC                     <  SRR4302545.4600438/94‑1 (MQ=60)

                                                                          TGCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGCTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCC                     >  SRR4302545.10841882/1‑94 (MQ=60)

                                                                           GCGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCC                    <  SRR4302545.5624757/94‑1 (MQ=60)

                                                                            CGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCC                   >  SRR4302545.143685/1‑94 (MQ=60)

                                                                            CGGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCC                   >  SRR4302545.8498628/1‑94 (MQ=60)

                                                                             GGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCT                  >  SRR4302545.10833966/1‑94 (MQ=60)

                                                                             GGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCT                  <  SRR4302545.7028494/94‑1 (MQ=60)

                                                                             GGGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGGTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCT                  >  SRR4302545.8815198/1‑94 (MQ=60)

                                                                              GGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTT                 <  SRR4302545.3994629/94‑1 (MQ=60)

                                                                              GGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTT                 <  SRR4302545.3778032/94‑1 (MQ=60)

                                                                              GGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTT                 <  SRR4302545.150495/94‑1 (MQ=60)

                                                                              GGACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAAGCCCCTT                 <  SRR4302545.3778034/94‑1 (MQ=60)

                                                                               GACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTT                <  SRR4302545.9391375/94‑1 (MQ=60)

                                                                               GACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGCGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTT                >  SRR4302545.2859730/1‑94 (MQ=60)

                                                                                TCGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTA               >  SRR4302545.4723961/1‑94 (MQ=60)

                                                                                ACGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTA               >  SRR4302545.6651518/1‑94 (MQ=60)

                                                                                 CGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAA              <  SRR4302545.6790620/94‑1 (MQ=60)

                                                                                 CGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAA              >  SRR4302545.7487202/1‑94 (MQ=60)

                                                                                 CGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAA              <  SRR4302545.25564/94‑1 (MQ=60)

                                                                                 CGCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAA              >  SRR4302545.2510784/1‑94 (MQ=60)

                                                                                  GCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAAC             >  SRR4302545.4444783/1‑94 (MQ=60)

                                                                                  GCACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAAC             >  SRR4302545.4732228/1‑94 (MQ=60)

                                                                                   CACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACT            <  SRR4302545.2290960/94‑1 (MQ=60)

                                                                                   CACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACT            >  SRR4302545.9128773/1‑94 (MQ=60)

                                                                                    ACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTG           >  SRR4302545.3798455/1‑94 (MQ=60)

                                                                                    ACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTG           >  SRR4302545.6893280/1‑94 (MQ=60)

                                                                                    ACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTG           >  SRR4302545.8977566/1‑94 (MQ=60)

                                                                                    ACAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTG           >  SRR4302545.10812374/1‑94 (MQ=60)

                                                                                     CAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGT          <  SRR4302545.6914992/94‑1 (MQ=60)

                                                                                     CAAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGT          <  SRR4302545.5693705/94‑1 (MQ=60)

                                                                                      AAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTA         >  SRR4302545.968444/1‑94 (MQ=60)

                                                                                      AAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTA         <  SRR4302545.246197/94‑1 (MQ=60)

                                                                                      AAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTA         >  SRR4302545.9036320/1‑94 (MQ=60)

                                                                                      AAAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTA         <  SRR4302545.229048/94‑1 (MQ=60)

                                                                                       AAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAA        >  SRR4302545.9245423/1‑94 (MQ=60)

                                                                                       AAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAA        <  SRR4302545.6700236/94‑1 (MQ=60)

                                                                                       AAATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAA        >  SRR4302545.7000018/1‑94 (MQ=60)

                                                                                        AATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAAC       <  SRR4302545.6632639/94‑1 (MQ=60)

                                                                                        AATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAAC       <  SRR4302545.4108978/94‑1 (MQ=60)

                                                                                         ATCGCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACG      <  SRR4302545.3812354/94‑1 (MQ=60)

                                                                                            GCCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGGAA   >  SRR4302545.10696030/1‑94 (MQ=60)

                                                                                             CCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGGAAT  <  SRR4302545.927950/94‑1 (MQ=60)

TTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGATGTTGCGGGACGCACAAAATCGTCCCGAAATACGTTTACTGCATAACAGGTTGAATGTCGTGGATACGTACAAAGCCTAACTGATCCACAGAAATCCCCTTTAACTGTAACGGAAT  >  NC_000913/431430‑431616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`