Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	654,248	A→G	M315T (ATG→ACG)	dcuC ←	DcuC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	654,248	0	A	G	98.8%	1168.6 / 0.5	345	M315T (ATG→ACG)	dcuC	DcuC
Reads supporting (aligned to +/- strand): ref base A (2/2); new base G (189/150); total (191/154)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01

Only 100 of 361 total aligned reads displayed.

CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACT  >  NC_000913/654157‑654338

cGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTc                                                                                          >  1:379961/1‑94 (MQ=255)

cGAACCAAACGAAGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTc                                                                                          <  2:4438427/94‑1 (MQ=255)

   aCCAAACGAGGTAGCGATAAAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTcacc                                                                                       <  2:1580719/94‑1 (MQ=255)

     cAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTcaccac                                                                                     <  2:7980150/94‑1 (MQ=255)

     cAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTcaccac                                                                                     >  2:10560859/1‑94 (MQ=255)

      aaaCGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACg                                                                                    >  1:87493/1‑94 (MQ=255)

      aaaCGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACg                                                                                    >  2:8879154/1‑94 (MQ=255)

         cGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTa                                                                                 >  1:10049025/1‑94 (MQ=255)

         cGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTa                                                                                 >  1:1500613/1‑94 (MQ=255)

          gAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAg                                                                                >  2:1826587/1‑94 (MQ=255)

           aGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGc                                                                               >  2:3763900/1‑94 (MQ=255)

           aGGTAGCCATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGc                                                                               <  2:3856898/94‑1 (MQ=255)

            ggTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCa                                                                              >  1:3242493/1‑94 (MQ=255)

              tAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCaaa                                                                            >  1:478284/1‑94 (MQ=255)

                  gATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCa                                                                        >  2:6906688/1‑94 (MQ=255)

                   aTAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCAt                                                                       <  1:9211665/94‑1 (MQ=255)

                   aTAGAAACCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGCCACCACGTTAGCAAACGCac                                                                       >  2:8073190/1‑93 (MQ=255)

                    tAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATc                                                                      <  1:1599177/94‑1 (MQ=255)

                     aGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCt                                                                     <  1:1016967/94‑1 (MQ=255)

                     aGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCt                                                                     >  2:4931470/1‑94 (MQ=255)

                      gAAATCATACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTg                                                                    >  1:7559031/1‑94 (MQ=255)

                      gAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAGTACACCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTg                                                                    >  2:6728069/1‑94 (MQ=255)

                       aaaTCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGc                                                                   >  1:10390946/1‑94 (MQ=255)

                       aaaTCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGc                                                                   >  1:6883567/1‑94 (MQ=255)

                       aaaTCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGc                                                                   >  2:6471562/1‑94 (MQ=255)

                       aaaTCAGACTATGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGc                                                                   >  1:7042847/1‑94 (MQ=255)

                         aTCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCa                                                                 >  2:5012619/1‑94 (MQ=255)

                         aTCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCa                                                                 <  1:1051795/94‑1 (MQ=255)

                           cAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATc                                                               <  2:1246723/94‑1 (MQ=255)

                           cAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATc                                                               >  2:4008548/1‑94 (MQ=255)

                           cAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATc                                                               >  2:6560138/1‑94 (MQ=255)

                              aCTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCcg                                                            >  1:4837969/1‑94 (MQ=255)

                               cTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCcgc                                                           >  1:5915487/1‑94 (MQ=255)

                               cTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCcgc                                                           >  1:5495961/1‑94 (MQ=255)

                                tttGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCcgcg                                                          <  2:3597959/94‑1 (MQ=255)

                                tttGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACCCATTTGCCATCCcgcg                                                          >  1:3820729/1‑94 (MQ=255)

                                  tGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGAt                                                        <  2:5547694/94‑1 (MQ=255)

                                  tGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGAt                                                        >  1:5716198/1‑94 (MQ=255)

                                    aaTAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATaa                                                      >  2:4599837/1‑94 (MQ=255)

                                    aaTAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATaa                                                      >  2:7583974/1‑94 (MQ=255)

                                     aTAAAGCCGATGGGGCTAAGCCCCTGAGCAAATACCCCAGCGGCAACCAGCAGCGTCACCACGTCAGCAAACGCATCTGCCATCCCGCGATAAg                                                     <  2:2443502/94‑1 (MQ=255)

                                      tAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGc                                                    >  2:1457854/1‑94 (MQ=255)

                                       aaaGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGcc                                                   <  2:821930/94‑1 (MQ=255)

                                       aaaGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGcc                                                   <  1:7924595/94‑1 (MQ=255)

                                        aaGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCa                                                  <  1:1698771/94‑1 (MQ=255)

                                          gCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACt                                                <  2:8316824/94‑1 (MQ=255)

                                          gCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACt                                                <  2:10506779/94‑1 (MQ=255)

                                           ccGATGGTGCTAAGCCCCTGCGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACtt                                               <  1:3119682/94‑1 (MQ=255)

                                           ccGATGGTGCTAAGCCCCTGAGCTAATCCCCCAGCGGCAACCAGCAGCGTCACCGCGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACtt                                               <  2:3101284/94‑1 (MQ=255)

                                           ccGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACtt                                               <  2:5985783/94‑1 (MQ=255)

                                            cGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTc                                              >  1:2002689/1‑94 (MQ=255)

                                             gATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTcc                                             >  1:4702723/1‑94 (MQ=255)

                                             gATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTcc                                             <  1:2326357/94‑1 (MQ=255)

                                              gtGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTcca                                            <  2:5635336/93‑1 (MQ=255)

                                              aTGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTcca                                            >  2:3281635/1‑94 (MQ=255)

                                               tGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTccag                                           >  1:519717/1‑94 (MQ=255)

                                                   gCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTccagacca                                       >  2:9571004/1‑94 (MQ=255)

                                                   gCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTccagacca                                       <  1:6688610/94‑1 (MQ=255)

                                                    cTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTccagaccag                                      >  2:8092861/1‑94 (MQ=255)

                                                     tAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTccagaccaga                                     <  1:9317994/94‑1 (MQ=255)

                                                      aaGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCagag                                    <  2:5264577/94‑1 (MQ=255)

                                                       aGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAgaga                                   >  1:9526253/1‑94 (MQ=255)

                                                       aGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAgaga                                   <  2:1018594/94‑1 (MQ=255)

                                                        gCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGaa                                  >  1:1080500/1‑94 (MQ=255)

                                                        gCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCAGCGATAAGCCACTTCCAGACCAGAGaa                                  >  2:7190071/1‑94 (MQ=255)

                                                         ccccTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGaaa                                 <  2:2062198/94‑1 (MQ=255)

                                                         ccccTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGaaa                                 >  1:5358362/1‑94 (MQ=255)

                                                          cccTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGaaaa                                >  1:9860464/1‑94 (MQ=255)

                                                           ccTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAAc                               <  1:4234619/94‑1 (MQ=255)

                                                           ccTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAAc                               >  1:6224737/1‑94 (MQ=255)

                                                            cTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCGCCTTACAGAACAGCGAAAACt                              >  2:6044382/1‑94 (MQ=255)

                                                            cTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACt                              <  2:2540075/94‑1 (MQ=255)

                                                            cTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACt                              >  1:8022966/1‑94 (MQ=255)

                                                             tGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACtt                             >  2:3499644/1‑94 (MQ=255)

                                                              gAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACttt                            >  1:5253440/1‑94 (MQ=255)

                                                              gAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACttt                            <  1:3483755/94‑1 (MQ=255)

                                                               aGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTc                           <  1:2825573/94‑1 (MQ=255)

                                                                gCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCt                          <  1:891835/94‑1 (MQ=255)

                                                                gCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCt                          <  1:6417020/94‑1 (MQ=255)

                                                                   aaTACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTggg                       >  1:117213/1‑94 (MQ=255)

                                                                    aTACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGt                      <  1:4961497/94‑1 (MQ=255)

                                                                     tACCCGCGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTa                     <  1:9137791/94‑1 (MQ=255)

                                                                      aCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAt                    >  2:8697033/1‑94 (MQ=255)

                                                                      aCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAt                    >  1:2410792/1‑94 (MQ=255)

                                                                       ccccAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAtt                   >  1:5572723/1‑94 (MQ=255)

                                                                        cccAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTa                  >  1:2602990/1‑94 (MQ=255)

                                                                          cAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTaaa                >  2:9403940/1‑94 (MQ=255)

                                                                          cAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTaaa                <  2:7386324/94‑1 (MQ=255)

                                                                           aGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAg               <  2:9231650/94‑1 (MQ=255)

                                                                             cGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCt             <  2:2856660/94‑1 (MQ=255)

                                                                             cGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCt             >  1:4560362/1‑94 (MQ=255)

                                                                              ggCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTg            >  2:6358521/1‑94 (MQ=255)

                                                                              ggCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTg            <  2:4767300/94‑1 (MQ=255)

                                                                                cAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCg          >  2:9808701/1‑94 (MQ=255)

                                                                                 aaCCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCgg         >  1:3569932/1‑94 (MQ=255)

                                                                                 aaCCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCgg         >  1:407605/1‑94 (MQ=255)

                                                                                 aaCCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCgg         >  2:10284755/1‑94 (MQ=255)

                                                                                 aaCCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCgg         <  1:10463375/94‑1 (MQ=255)

                                                                                   ccAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCggag       >  2:2271429/1‑94 (MQ=255)

                                                                                    cagcagCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCggagg      >  1:8523948/1‑94 (MQ=255)

CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACT  >  NC_000913/654157‑654338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCCGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACTC  >  NC_000913/654155‑654339

GCCGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCG                                                                                             >  SRR4302545.3078517/1‑94 (MQ=60)

GCCGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCG                                                                                             <  SRR4302545.2671826/94‑1 (MQ=60)

 CCGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGT                                                                                            >  SRR4302545.554521/1‑94 (MQ=60)

  CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTC                                                                                           >  SRR4302545.388390/1‑94 (MQ=60)

  CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTC                                                                                           <  SRR4302545.3896352/94‑1 (MQ=60)

  CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTC                                                                                           <  SRR4302545.2632005/94‑1 (MQ=60)

  CGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAACACCAGCGTC                                                                                           >  SRR4302545.5419628/1‑94 (MQ=60)

   GAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCA                                                                                          >  SRR4302545.6053951/1‑94 (MQ=60)

   GAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCA                                                                                          >  SRR4302545.6053953/1‑94 (MQ=60)

   GAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCA                                                                                          <  SRR4302545.5070125/94‑1 (MQ=60)

     ACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACC                                                                                        >  SRR4302545.8679921/1‑94 (MQ=60)

     ACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACC                                                                                        <  SRR4302545.4906086/94‑1 (MQ=60)

      CCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCA                                                                                       >  SRR4302545.942742/1‑94 (MQ=60)

        AAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACG                                                                                     <  SRR4302545.4096962/94‑1 (MQ=60)

        AAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACG                                                                                     <  SRR4302545.9623174/94‑1 (MQ=60)

        AAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACG                                                                                     >  SRR4302545.89506/1‑94 (MQ=60)

         AACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGT                                                                                    <  SRR4302545.924278/94‑1 (MQ=60)

          ACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCTTCACCACGTT                                                                                   <  SRR4302545.7467552/94‑1 (MQ=60)

           CGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTA                                                                                  >  SRR4302545.4562820/1‑94 (MQ=60)

           CGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTA                                                                                  >  SRR4302545.1535388/1‑94 (MQ=60)

           CGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTA                                                                                  >  SRR4302545.10346549/1‑94 (MQ=60)

            GAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAG                                                                                 >  SRR4302545.3146789/1‑94 (MQ=60)

              GGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCA                                                                               >  SRR4302545.3322112/1‑94 (MQ=60)

                TAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAA                                                                             >  SRR4302545.488955/1‑94 (MQ=60)

                 AGCGATAGAAATCAGACTTTGAATAAAGCAGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCACAC                                                                            >  SRR4302545.7065275/1‑94 (MQ=60)

                  GCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACG                                                                           <  SRR4302545.9779413/94‑1 (MQ=60)

                   CGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGC                                                                          <  SRR4302545.9473405/94‑1 (MQ=60)

                   CGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGC                                                                          <  SRR4302545.9473406/94‑1 (MQ=60)

                     ATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCAT                                                                        >  SRR4302545.2813424/1‑94 (MQ=60)

                     ATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCAT                                                                        <  SRR4302545.9481692/94‑1 (MQ=60)

                     ATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCAT                                                                        >  SRR4302545.1032660/1‑94 (MQ=60)

                      TAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATC                                                                       <  SRR4302545.1637069/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATCCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      <  SRR4302545.7206335/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      <  SRR4302545.1349882/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      <  SRR4302545.10036858/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      <  SRR4302545.7206336/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      <  SRR4302545.1039386/94‑1 (MQ=60)

                       AGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCT                                                                      >  SRR4302545.900447/1‑94 (MQ=60)

                        GAAATCATACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTG                                                                     >  SRR4302545.7772690/1‑94 (MQ=60)

                        GAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTG                                                                     >  SRR4302545.1645518/1‑94 (MQ=60)

                        GAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTG                                                                     <  SRR4302545.7840681/94‑1 (MQ=60)

                         AAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    >  SRR4302545.7072807/1‑94 (MQ=60)

                         AAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    >  SRR4302545.10697291/1‑94 (MQ=60)

                         AAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    >  SRR4302545.10697292/1‑94 (MQ=60)

                         AAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    >  SRR4302545.5660239/1‑94 (MQ=60)

                         AAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    <  SRR4302545.3359034/94‑1 (MQ=60)

                         AAATCAGACTATGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGC                                                                    >  SRR4302545.7237420/1‑94 (MQ=60)

                          AATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCC                                                                   >  SRR4302545.5350889/1‑94 (MQ=60)

                           ATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCA                                                                  <  SRR4302545.1074687/94‑1 (MQ=60)

                            TCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCAT                                                                 <  SRR4302545.979949/94‑1 (MQ=60)

                             CAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATC                                                                >  SRR4302545.9226530/1‑94 (MQ=60)

                             CAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATC                                                                >  SRR4302545.1992840/1‑94 (MQ=60)

                              AGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCC                                                               >  SRR4302545.7969462/1‑94 (MQ=60)

                              AGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCC                                                               >  SRR4302545.3153109/1‑94 (MQ=60)

                              AGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCC                                                               >  SRR4302545.7922166/1‑94 (MQ=60)

                                ACTTTGAATAAAGCCGCTGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCTCGTTAGCAAACGCATCTGCCATCCCG                                                             <  SRR4302545.8155064/94‑1 (MQ=60)

                                ACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCG                                                             >  SRR4302545.4961352/1‑94 (MQ=60)

                                 CTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGC                                                            >  SRR4302545.6075042/1‑94 (MQ=60)

                                 CTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGC                                                            >  SRR4302545.5640635/1‑94 (MQ=60)

                                  TTTGAATAAAGCGGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAATCGCAGCTGCCATCCCGCG                                                           <  SRR4302545.10773457/94‑1 (MQ=60)

                                  TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACCCATTTGCCATCCCGCG                                                           >  SRR4302545.3915818/1‑94 (MQ=60)

                                   TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGA                                                          <  SRR4302545.8382007/94‑1 (MQ=60)

                                   TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGA                                                          <  SRR4302545.9512595/94‑1 (MQ=60)

                                    TGCATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATCCCCCAGCGGCACCCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGAT                                                         <  SRR4302545.9697220/94‑1 (MQ=60)

                                    TGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGAT                                                         >  SRR4302545.389034/1‑94 (MQ=60)

                                    TGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGAT                                                         >  SRR4302545.5869484/1‑94 (MQ=60)

                                     GAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATA                                                        >  SRR4302545.1127353/1‑94 (MQ=60)

                                     GAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATA                                                        >  SRR4302545.5181585/1‑94 (MQ=60)

                                      AATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAA                                                       >  SRR4302545.4614132/1‑94 (MQ=60)

                                       ATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAG                                                      >  SRR4302545.9001871/1‑94 (MQ=60)

                                       ATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTCAGCAAACGCATCTGCCATCCCGCGATCAG                                                      >  SRR4302545.6488703/1‑94 (MQ=60)

                                       ATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATAACCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATGCCGCGATAAG                                                      >  SRR4302545.10505597/1‑94 (MQ=60)

                                        TAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGC                                                     >  SRR4302545.8238195/1‑94 (MQ=60)

                                        TAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGC                                                     >  SRR4302545.4212958/1‑94 (MQ=60)

                                        TAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGC                                                     >  SRR4302545.4295143/1‑94 (MQ=60)

                                        TAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGC                                                     >  SRR4302545.109376/1‑94 (MQ=60)

                                         AAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCC                                                    >  SRR4302545.57077/1‑94 (MQ=60)

                                         AAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCC                                                    <  SRR4302545.8149628/94‑1 (MQ=60)

                                          AAGCCGATGGTGCTAAGCCCCTGAGCGAATCCGCCAGCGGCAAGCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCA                                                   <  SRR4302545.5833405/94‑1 (MQ=60)

                                          AAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCA                                                   >  SRR4302545.4821703/1‑94 (MQ=60)

                                          AAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCA                                                   >  SRR4302545.4085878/1‑94 (MQ=60)

                                          AAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCA                                                   <  SRR4302545.1739166/94‑1 (MQ=60)

                                           AGCCGATGGTTCTCAGCCCCTGTGCGAATACCCCCGCGGCCACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCCCGATAAGCCAC                                                  >  SRR4302545.5719248/1‑94 (MQ=60)

                                            GCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACT                                                 >  SRR4302545.3551979/1‑94 (MQ=60)

                                             gcgatgggtCTAAGCCACTGAGCGAATACCCCAGCGGCACCCAGCAGCGTCACCGCGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                <  SRR4302545.2347290/85‑1 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGCGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                <  SRR4302545.3196633/94‑1 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                <  SRR4302545.10465679/94‑1 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                <  SRR4302545.2347291/94‑1 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                >  SRR4302545.240194/1‑94 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                >  SRR4302545.10841297/1‑94 (MQ=60)

                                             CCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTT                                                >  SRR4302545.3450153/1‑94 (MQ=60)

                                              CGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTC                                               >  SRR4302545.2052215/1‑94 (MQ=60)

                                              CGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTC                                               <  SRR4302545.5425961/94‑1 (MQ=60)

                                               GATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCC                                              >  SRR4302545.1291461/1‑94 (MQ=60)

                                               GATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCC                                              >  SRR4302545.6905749/1‑94 (MQ=60)

                                               GATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCC                                              >  SRR4302545.4822562/1‑94 (MQ=60)

                                               GATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCC                                              >  SRR4302545.4920588/1‑94 (MQ=60)

                                               GATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCC                                              <  SRR4302545.2383002/94‑1 (MQ=60)

                                                ATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCA                                             <  SRR4302545.1127726/94‑1 (MQ=60)

                                                 TGGTGCTAAGCCCCTGAGCGAATGCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAG                                            <  SRR4302545.5646102/94‑1 (MQ=60)

                                                 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAG                                            <  SRR4302545.2111027/94‑1 (MQ=60)

                                                 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAG                                            <  SRR4302545.10595047/94‑1 (MQ=60)

                                                 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAG                                            >  SRR4302545.531340/1‑94 (MQ=60)

                                                 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTACAG                                            >  SRR4302545.1426537/1‑94 (MQ=60)

                                                  GGTGCGAAGCCCCTGAGCGAATACCCCAGCGACAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGA                                           <  SRR4302545.10799138/94‑1 (MQ=60)

                                                    TGCTAAGCCCCTGAGCGAATCCCCCAGCGGCAACCAGCAGCGTCGCCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACC                                         <  SRR4302545.6795527/94‑1 (MQ=60)

                                                    TGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACC                                         >  SRR4302545.2003676/1‑94 (MQ=60)

                                                    TGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACC                                         <  SRR4302545.5496446/94‑1 (MQ=60)

                                                     GCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCA                                        <  SRR4302545.6871978/94‑1 (MQ=60)

                                                      CTAAGCCCCTGAGCGAATCCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAG                                       <  SRR4302545.10812570/94‑1 (MQ=60)

                                                      CTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAG                                       <  SRR4302545.356403/94‑1 (MQ=60)

                                                      CTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAG                                       <  SRR4302545.6336490/94‑1 (MQ=60)

                                                      CTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAG                                       >  SRR4302545.9262125/1‑94 (MQ=60)

                                                       TAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGA                                      >  SRR4302545.9577587/1‑94 (MQ=60)

                                                       TAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGA                                      >  SRR4302545.292217/1‑94 (MQ=60)

                                                       TAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGA                                      <  SRR4302545.9591187/94‑1 (MQ=60)

                                                        AAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAG                                     <  SRR4302545.4693921/94‑1 (MQ=60)

                                                         AGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGA                                    >  SRR4302545.9806734/1‑94 (MQ=60)

                                                          GCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAA                                   >  SRR4302545.1103919/1‑94 (MQ=60)

                                                          GCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAA                                   >  SRR4302545.1103923/1‑94 (MQ=60)

                                                           CCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAA                                  >  SRR4302545.5497628/1‑94 (MQ=60)

                                                            CCCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAA                                 >  SRR4302545.10153516/1‑94 (MQ=60)

                                                             CCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGcagac                                >  SRR4302545.6375317/1‑89 (MQ=60)

                                                             CCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAAC                                >  SRR4302545.6394320/1‑94 (MQ=60)

                                                             CCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAAC                                >  SRR4302545.162183/1‑94 (MQ=60)

                                                             CCTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAAC                                <  SRR4302545.4340481/94‑1 (MQ=60)

                                                              CTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACT                               >  SRR4302545.3792015/1‑94 (MQ=60)

                                                              CTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACT                               >  SRR4302545.8251450/1‑94 (MQ=60)

                                                              CTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACT                               <  SRR4302545.3867415/94‑1 (MQ=60)

                                                              CTGAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAACAAACTCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACT                               >  SRR4302545.4651003/1‑94 (MQ=60)

                                                              CTGAGCGAATACCCCAGCGGCAACCAGCAGCACCACACCGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTCCCAGACCAAAGAAACCT                               >  SRR4302545.10395021/1‑94 (MQ=60)

                                                                GAGCGAATGCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTT                             <  SRR4302545.482012/94‑1 (MQ=60)

                                                                GAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTT                             <  SRR4302545.3569161/94‑1 (MQ=60)

                                                                GAGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTT                             >  SRR4302545.5389180/1‑94 (MQ=60)

                                                                 AGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTC                            <  SRR4302545.2893942/94‑1 (MQ=60)

                                                                 AGCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTC                            >  SRR4302545.2431550/1‑94 (MQ=60)

                                                                  GCGAATCCCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.5209548/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.5734157/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.383022/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.3255579/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.5710473/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.911830/94‑1 (MQ=60)

                                                                  GCGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCT                           <  SRR4302545.6592466/94‑1 (MQ=60)

                                                                   CGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTG                          <  SRR4302545.6700970/94‑1 (MQ=60)

                                                                   CGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTG                          >  SRR4302545.5081610/1‑94 (MQ=60)

                                                                   CGAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTG                          >  SRR4302545.5081611/1‑94 (MQ=60)

                                                                    GAATACCCCAGCGGCACCCAGCAGCGTCACCACGTTGGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGG                         <  SRR4302545.2454594/94‑1 (MQ=60)

                                                                    GAATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGG                         <  SRR4302545.6343769/94‑1 (MQ=60)

                                                                     AATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGG                        >  SRR4302545.119892/1‑94 (MQ=60)

                                                                     AATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGG                        <  SRR4302545.1695893/94‑1 (MQ=60)

                                                                      ATACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGT                       <  SRR4302545.5087163/94‑1 (MQ=60)

                                                                      ATACCCCAGCGGCAACAAGAAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGT                       <  SRR4302545.9134115/94‑1 (MQ=60)

                                                                       TACCCGCGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTA                      <  SRR4302545.9406128/94‑1 (MQ=60)

                                                                       TACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTA                      <  SRR4302545.203591/94‑1 (MQ=60)

                                                                        TCCCCAGCGACAACCAGCAACGTCACCACGTTAGCAAACGGATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     <  SRR4302545.1707145/94‑1 (MQ=60)

                                                                        ACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     <  SRR4302545.4902605/94‑1 (MQ=60)

                                                                        ACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     >  SRR4302545.2469213/1‑94 (MQ=60)

                                                                        ACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     >  SRR4302545.3904815/1‑94 (MQ=60)

                                                                        ACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     <  SRR4302545.6162621/94‑1 (MQ=60)

                                                                        ACCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTAT                     >  SRR4302545.1640102/1‑94 (MQ=60)

                                                                         CCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATT                    >  SRR4302545.5720248/1‑94 (MQ=60)

                                                                         CCCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATT                    <  SRR4302545.4220591/94‑1 (MQ=60)

                                                                          CCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTA                   >  SRR4302545.3296847/1‑94 (MQ=60)

                                                                          CCCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTA                   >  SRR4302545.2665643/1‑94 (MQ=60)

                                                                           CCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAA                  >  SRR4302545.10162948/1‑94 (MQ=60)

                                                                           CCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAA                  >  SRR4302545.10589990/1‑94 (MQ=60)

                                                                           CCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAA                  <  SRR4302545.2719705/94‑1 (MQ=60)

                                                                           CCAGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAA                  <  SRR4302545.6789974/94‑1 (MQ=60)

                                                                             AGCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAG                >  SRR4302545.7623089/1‑94 (MQ=60)

                                                                              GCGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGC               <  SRR4302545.1013676/94‑1 (MQ=60)

                                                                               CGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCT              <  SRR4302545.4880857/94‑1 (MQ=60)

                                                                               CGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCT              >  SRR4302545.4677359/1‑94 (MQ=60)

                                                                               CGGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCT              >  SRR4302545.8947690/1‑94 (MQ=60)

                                                                                GGCAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTG             >  SRR4302545.5372260/1‑94 (MQ=60)

                                                                                  CAACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCG           <  SRR4302545.698012/94‑1 (MQ=60)

                                                                                   AACCAGCAGCTTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          <  SRR4302545.6461322/94‑1 (MQ=60)

                                                                                   AACCAGCAGCGTCCCCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          <  SRR4302545.361035/94‑1 (MQ=60)

                                                                                   AACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          <  SRR4302545.10771856/94‑1 (MQ=60)

                                                                                   AACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          >  SRR4302545.3657131/1‑94 (MQ=60)

                                                                                   AACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          <  SRR4302545.2759438/94‑1 (MQ=60)

                                                                                   AACCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGG          >  SRR4302545.416653/1‑94 (MQ=60)

                                                                                     CCAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAG        <  SRR4302545.7353215/94‑1 (MQ=60)

                                                                                      CAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGaaga       >  SRR4302545.5500093/1‑90 (MQ=60)

                                                                                      CAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGG       >  SRR4302545.9057328/1‑94 (MQ=60)

                                                                                      CAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGG       >  SRR4302545.8770275/1‑94 (MQ=60)

                                                                                      CAGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGG       >  SRR4302545.8639237/1‑94 (MQ=60)

                                                                                       AGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGATGA      >  SRR4302545.1559852/1‑94 (MQ=60)

                                                                                       AGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGA      <  SRR4302545.2592297/94‑1 (MQ=60)

                                                                                       AGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGA      >  SRR4302545.5537125/1‑94 (MQ=60)

                                                                                       AGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGA      >  SRR4302545.10762811/1‑94 (MQ=60)

                                                                                       AGCAGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGA      <  SRR4302545.10129582/94‑1 (MQ=60)

                                                                                          AGCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACT   <  SRR4302545.5315955/94‑1 (MQ=60)

                                                                                           GCGTCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACTC  <  SRR4302545.10241441/94‑1 (MQ=60)

GCCGAACCAAACGAGGTAGCGATAGAAATCAGACTTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGCCATCCCGCGATAAGCCACTTCCAGACCAGAGAAAACTTTCTGGGTATTAAAGCTGCGGAGGAACTC  >  NC_000913/654155‑654339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`