Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 742,023 A→G intergenic (‑244/‑27) ybgH ← / → ybgI putative transport protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913742,0230AG99.7% 1083.3 / ‑4.7 312intergenic (‑244/‑27)ybgH/ybgIputative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (123/188);  total (123/189)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.14e-01

Only 100 of 329 total aligned reads displayed.

AATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTAGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATT  >  NC_000913/741932‑742113
                                                                                           |                                                                                          
aaTTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGc                                                                                          >  2:4827412/1‑94 (MQ=255)
 aTTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCt                                                                                         >  1:5303555/1‑94 (MQ=255)
    tGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATc                                                                                      <  1:4680597/94‑1 (MQ=255)
     gCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGAGGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCa                                                                                     <  2:1860943/94‑1 (MQ=255)
      cGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAg                                                                                    <  2:9641622/94‑1 (MQ=255)
      cGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAg                                                                                    >  2:7821217/1‑94 (MQ=255)
       gTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGa                                                                                   >  1:1250711/1‑94 (MQ=255)
       gTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGa                                                                                   >  2:6786256/1‑94 (MQ=255)
       gTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGa                                                                                   >  2:1623898/1‑94 (MQ=255)
        tCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGaa                                                                                  <  2:3346375/94‑1 (MQ=255)
        tCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGaa                                                                                  <  1:1035177/94‑1 (MQ=255)
         cTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAAt                                                                                 >  2:2059880/1‑94 (MQ=255)
            ttGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACg                                                                              <  1:2001986/94‑1 (MQ=255)
            ttGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACg                                                                              <  2:4197664/94‑1 (MQ=255)
            ttGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACg                                                                              <  2:9302570/94‑1 (MQ=255)
                cGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAg                                                                          <  2:5677941/94‑1 (MQ=255)
                cGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAg                                                                          <  1:7552177/94‑1 (MQ=255)
                cGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAg                                                                          <  1:1840931/94‑1 (MQ=255)
                 gTCGGTTTTGCTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAgg                                                                         <  1:4427845/94‑1 (MQ=255)
                 gTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAgg                                                                         <  1:2880251/94‑1 (MQ=255)
                 gTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAgg                                                                         >  2:10535431/1‑94 (MQ=255)
                     ggTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGcgcg                                                                     <  1:5920801/94‑1 (MQ=255)
                     ggTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGcgcg                                                                     <  1:6949167/94‑1 (MQ=255)
                     ggTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATAAGGAAGGcgcg                                                                     <  2:8375655/94‑1 (MQ=255)
                      gtttgtttCTTAATATGTCAAAAGATTGGCTATCGACCAACTCGCGAGGTAACGCTATGTTAACGGTGCGGATATCAGAATACGGTAGGCGCGa                                                                    >  1:1559714/1‑94 (MQ=255)
                        ttgtttCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAg                                                                  <  2:8072424/94‑1 (MQ=255)
                          gtttCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGAt                                                                >  1:3041019/1‑94 (MQ=255)
                           tttCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATg                                                               <  1:8225056/94‑1 (MQ=255)
                            ttCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGa                                                              <  1:2675610/94‑1 (MQ=255)
                             tCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGaa                                                             >  1:9241016/1‑94 (MQ=255)
                                tAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGaaaaa                                                          <  1:9092104/94‑1 (MQ=255)
                                tAATATGTCAAAAGATGGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGaaaaa                                                          <  2:4513596/94‑1 (MQ=255)
                                 aaTATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAac                                                         >  1:9637191/1‑94 (MQ=255)
                                  atatGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAaca                                                        <  1:5683884/94‑1 (MQ=255)
                                    atGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACAcc                                                      <  2:7081465/94‑1 (MQ=255)
                                    atGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACAcc                                                      >  1:1014623/1‑94 (MQ=255)
                                     tGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCg                                                     <  1:3632643/94‑1 (MQ=255)
                                     tGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCg                                                     <  1:3069178/94‑1 (MQ=255)
                                      gTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGa                                                    >  1:3335713/1‑94 (MQ=255)
                                      gTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGa                                                    <  2:5149392/94‑1 (MQ=255)
                                      gTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGa                                                    >  2:6185275/1‑94 (MQ=255)
                                       tCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGaa                                                   <  2:1380135/94‑1 (MQ=255)
                                        cAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCGGAATACGGAAGGCGCGAAGATGAAAAACACCGAAc                                                  <  1:4145846/94‑1 (MQ=255)
                                        cAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGGGCGAAGATGAAAAACACCGAAc                                                  >  2:4702026/1‑94 (MQ=255)
                                        cAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGAGCGAAGATGAAAAACACCGAAc                                                  >  2:7185572/1‑94 (MQ=255)
                                          aaaGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTg                                                <  2:2597003/94‑1 (MQ=255)
                                           aaGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTgg                                               >  2:7919994/1‑94 (MQ=255)
                                           aaGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTgg                                               <  1:10088001/94‑1 (MQ=255)
                                            aGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGa                                              <  2:2981861/94‑1 (MQ=255)
                                             gATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGaa                                             >  2:8493035/1‑94 (MQ=255)
                                              aTTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGaac                                            >  1:9858701/1‑94 (MQ=255)
                                                tGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGaacaa                                          <  1:7421894/94‑1 (MQ=255)
                                                 ggCTATCGCCGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAGGATGAAACACACCAAACTGGgtcaac                                         <  1:9422402/94‑1 (MQ=255)
                                                  gCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACt                                        <  1:4528493/94‑1 (MQ=255)
                                                  gCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACt                                        >  2:1088866/1‑94 (MQ=255)
                                                  gCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACt                                        >  2:63574/1‑94 (MQ=255)
                                                  gCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGAGCGAAGATGAAAAACACCGCACTGGAACAACt                                        >  1:2203398/1‑94 (MQ=255)
                                                   cTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGGACAACTg                                       >  1:6865072/1‑94 (MQ=255)
                                                   cTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTg                                       <  2:4286216/94‑1 (MQ=255)
                                                    tATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGa                                      >  1:5422648/1‑94 (MQ=255)
                                                    tATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGa                                      >  2:34826/1‑94 (MQ=255)
                                                     aTCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGAt                                     <  1:4879288/94‑1 (MQ=255)
                                                     aTCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGAt                                     <  2:7496974/94‑1 (MQ=255)
                                                      tCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGAtt                                    >  1:2609482/1‑94 (MQ=255)
                                                        gacgaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTaa                                  <  1:9978548/94‑1 (MQ=255)
                                                        cacgaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTaa                                  <  2:7103184/93‑1 (MQ=255)
                                                         acgaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAAc                                 >  1:3990301/1‑94 (MQ=255)
                                                         acgaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAAc                                 <  1:8407216/94‑1 (MQ=255)
                                                          cgaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACg                                >  1:7252607/1‑94 (MQ=255)
                                                           ggaCTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGa                               >  2:3422401/3‑94 (MQ=255)
                                                           gaACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGa                               <  1:9001040/94‑1 (MQ=255)
                                                            aaCTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaa                              >  2:3791502/1‑94 (MQ=255)
                                                            aaCTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaa                              >  2:6849251/1‑94 (MQ=255)
                                                            aaCTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaa                              <  2:1268717/94‑1 (MQ=255)
                                                            aaCTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaa                              >  2:6564558/1‑94 (MQ=255)
                                                               tGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaaaaa                           <  1:5106499/94‑1 (MQ=255)
                                                               tGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGaaaaa                           <  2:5810427/94‑1 (MQ=255)
                                                                ggCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAAc                          >  2:5941223/1‑94 (MQ=255)
                                                                 gCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACt                         <  2:8908463/94‑1 (MQ=255)
                                                                   gAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGa                       <  1:2092011/94‑1 (MQ=255)
                                                                   gAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGa                       <  1:6280301/94‑1 (MQ=255)
                                                                    aGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGaa                      >  2:2667667/1‑94 (MQ=255)
                                                                     ggTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAAc                     <  1:9550185/94‑1 (MQ=255)
                                                                        aaCGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAgc                  >  1:1060910/1‑94 (MQ=255)
                                                                         aCGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAgcg                 >  1:7652898/1‑94 (MQ=255)
                                                                          cGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAgcgc                >  1:86708/1‑94 (MQ=255)
                                                                          cGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAgcgc                <  2:5435249/94‑1 (MQ=255)
                                                                          cGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAgcgc                >  1:4773753/1‑94 (MQ=255)
                                                                           gCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGcgcg               >  1:5033156/1‑94 (MQ=255)
                                                                           gCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGcgcg               <  2:9048616/94‑1 (MQ=255)
                                                                             tATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCgcggc             >  1:6681699/1‑94 (MQ=255)
                                                                               tGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGa           >  2:9848466/1‑94 (MQ=255)
                                                                                gTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAt          >  2:9491846/1‑94 (MQ=255)
                                                                                gTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAt          <  2:2243428/94‑1 (MQ=255)
                                                                                 ttAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAtt         >  1:2512701/1‑94 (MQ=255)
                                                                                  tAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTa        >  1:2399665/1‑94 (MQ=255)
                                                                                  tAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTa        <  1:3496083/94‑1 (MQ=255)
                                                                                   aaCGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAg       <  2:862589/94‑1 (MQ=255)
                                                                                       gtgtGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGAt   <  1:258865/94‑1 (MQ=255)
                                                                                        tgtgGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGAtt  <  2:2811321/94‑1 (MQ=255)
                                                                                           |                                                                                          
AATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTAGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATT  >  NC_000913/741932‑742113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACAATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTAGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTAC  >  NC_000913/741930‑742115
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ACAATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTG                                                                                              <  SRR4302545.2548460/94‑1 (MQ=60)
ACAATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTG                                                                                              <  SRR4302545.8734614/94‑1 (MQ=60)
 CAATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGG                                                                                             >  SRR4302545.10357158/1‑94 (MQ=60)
 CAATTTGCGTCTTTTGGCGGCGGGGTTGTGTGTTAATATGTCAAAAGATTGGCTATCGGCGAACTGGCGAGGTAACGCTATGTTAACGGTGTGG                                                                                             >  SRR4302545.10049338/1‑94 (MQ=60)
   ATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCT                                                                                           >  SRR4302545.5441039/1‑94 (MQ=60)
   ATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCT                                                                                           >  SRR4302545.5518747/1‑94 (MQ=60)
   ATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCT                                                                                           <  SRR4302545.10471115/94‑1 (MQ=60)
    TTTGCGTCTTTTGGCGTCGGGGTTGTTTCTTAATATGGCAAAAGATTGGCTATCGACGAACTGGCGAGGGAACGCTATGTTAACGGTGTGGCTA                                                                                          >  SRR4302545.7037278/1‑94 (MQ=60)
     TTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTAT                                                                                         <  SRR4302545.6289119/94‑1 (MQ=60)
      TGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATC                                                                                        <  SRR4302545.4799979/94‑1 (MQ=60)
      TGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATC                                                                                        >  SRR4302545.2918496/1‑94 (MQ=60)
      TGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATC                                                                                        <  SRR4302545.4799980/94‑1 (MQ=60)
       GCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCA                                                                                       <  SRR4302545.2096532/94‑1 (MQ=60)
       GCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCA                                                                                       <  SRR4302545.6980595/94‑1 (MQ=60)
       GCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATCTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCA                                                                                       <  SRR4302545.7214466/94‑1 (MQ=60)
        CGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAG                                                                                      <  SRR4302545.4667876/94‑1 (MQ=60)
         GTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGA                                                                                     >  SRR4302545.8785580/1‑94 (MQ=60)
         GTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGA                                                                                     >  SRR4302545.1278799/1‑94 (MQ=60)
          TCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAA                                                                                    <  SRR4302545.1057842/94‑1 (MQ=60)
           CTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAAT                                                                                   <  SRR4302545.109178/94‑1 (MQ=60)
           CTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAAT                                                                                   <  SRR4302545.1727729/94‑1 (MQ=60)
           CTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAAT                                                                                   <  SRR4302545.733962/94‑1 (MQ=60)
            TTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATA                                                                                  <  SRR4302545.4102962/94‑1 (MQ=60)
            TTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATA                                                                                  >  SRR4302545.2267286/1‑94 (MQ=60)
             TTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATAC                                                                                 <  SRR4302545.986408/94‑1 (MQ=60)
             TTTGGCGTCGGGTGTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATAC                                                                                 <  SRR4302545.595663/94‑1 (MQ=60)
              TTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACG                                                                                <  SRR4302545.2011524/94‑1 (MQ=60)
              TTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACG                                                                                <  SRR4302545.2051491/94‑1 (MQ=60)
              TTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGGGGCTATCAGAATACG                                                                                >  SRR4302545.6051426/1‑94 (MQ=60)
               TGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCGATGAGAATAAGG                                                                               >  SRR4302545.4550812/1‑94 (MQ=60)
                 GCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGGTATCAGAATACGGAA                                                                             >  SRR4302545.342194/1‑94 (MQ=60)
                  CGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAG                                                                            >  SRR4302545.8481483/1‑94 (MQ=60)
                  CGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAG                                                                            >  SRR4302545.1265562/1‑94 (MQ=60)
                  CGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAG                                                                            <  SRR4302545.7765669/94‑1 (MQ=60)
                  CGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAG                                                                            <  SRR4302545.1885737/94‑1 (MQ=60)
                   GTCGGTTTTGCTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGG                                                                           <  SRR4302545.4540425/94‑1 (MQ=60)
                   GTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGG                                                                           <  SRR4302545.5041465/94‑1 (MQ=60)
                   GTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGG                                                                           <  SRR4302545.2949950/94‑1 (MQ=60)
                   GTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGGAACGCTATGTTAACGGTGTGGCTATCAGAATACCGAAGG                                                                           >  SRR4302545.2657597/1‑94 (MQ=60)
                     CGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCG                                                                         >  SRR4302545.4231222/1‑94 (MQ=60)
                      GGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGC                                                                        >  SRR4302545.5231593/1‑94 (MQ=60)
                       GGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGCATACGGAAGGCGCG                                                                       >  SRR4302545.1940019/1‑94 (MQ=60)
                       GGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCG                                                                       <  SRR4302545.7140759/94‑1 (MQ=60)
                       GGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCG                                                                       <  SRR4302545.6080491/94‑1 (MQ=60)
                        GTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACCAACTCGCGAGGTAACGCTATGTTAACGGTGCGGATATCAGAATACGGTAGGCGCGA                                                                      >  SRR4302545.1596401/1‑94 (MQ=60)
                          TTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAG                                                                    <  SRR4302545.383496/94‑1 (MQ=60)
                           TGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGA                                                                   >  SRR4302545.5547605/1‑94 (MQ=60)
                           TGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGA                                                                   >  SRR4302545.10247644/1‑94 (MQ=60)
                            GTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGAT                                                                  <  SRR4302545.2248836/94‑1 (MQ=60)
                            GTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGAT                                                                  <  SRR4302545.6582518/94‑1 (MQ=60)
                            GTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGAT                                                                  >  SRR4302545.3115519/1‑94 (MQ=60)
                             TTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATG                                                                 <  SRR4302545.8463215/94‑1 (MQ=60)
                              TTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGA                                                                >  SRR4302545.8619846/1‑94 (MQ=60)
                              TTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGA                                                                <  SRR4302545.2740078/94‑1 (MQ=60)
                              TTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGA                                                                <  SRR4302545.4888756/94‑1 (MQ=60)
                              TTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGA                                                                >  SRR4302545.2602265/1‑94 (MQ=60)
                               TCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGCATACGGAAGGCGCGAAGATGAA                                                               >  SRR4302545.9511954/1‑94 (MQ=60)
                               TCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAA                                                               <  SRR4302545.1092572/94‑1 (MQ=60)
                                CTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAA                                                              <  SRR4302545.964216/94‑1 (MQ=60)
                                  TAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCATAATACGGAAGGCGCGAAGATGAAAAA                                                            <  SRR4302545.9358267/94‑1 (MQ=60)
                                  TAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAA                                                            <  SRR4302545.9358268/94‑1 (MQ=60)
                                   AATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAAC                                                           >  SRR4302545.9921282/1‑94 (MQ=60)
                                   AATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAAC                                                           <  SRR4302545.5251548/94‑1 (MQ=60)
                                    ATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACA                                                          <  SRR4302545.5835860/94‑1 (MQ=60)
                                      ATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTCTGTTAACGATGCGGCTATCAGAATACCGAAGGAGCGAAGATGAAcacaacg                                                        >  SRR4302545.3875871/1‑87 (MQ=60)
                                      ATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACC                                                        <  SRR4302545.9732601/94‑1 (MQ=60)
                                      ATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACC                                                        >  SRR4302545.7863774/1‑94 (MQ=60)
                                      ATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACC                                                        >  SRR4302545.1037011/1‑94 (MQ=60)
                                       TGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCG                                                       <  SRR4302545.3721277/94‑1 (MQ=60)
                                       TGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCG                                                       >  SRR4302545.10191074/1‑94 (MQ=60)
                                       TGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCG                                                       >  SRR4302545.5792312/1‑94 (MQ=60)
                                       TGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCG                                                       <  SRR4302545.2323307/94‑1 (MQ=60)
                                       TGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCG                                                       <  SRR4302545.3144441/94‑1 (MQ=60)
                                        GTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGA                                                      >  SRR4302545.3417234/1‑94 (MQ=60)
                                        GTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGA                                                      <  SRR4302545.7129203/94‑1 (MQ=60)
                                         TCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAA                                                     <  SRR4302545.9862341/94‑1 (MQ=60)
                                         TCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAA                                                     <  SRR4302545.10401763/94‑1 (MQ=60)
                                          CAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCGGAATACGGAAGGCGCGAAGATGAAAAACACCGAAC                                                    <  SRR4302545.4249415/94‑1 (MQ=60)
                                           AAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACT                                                   <  SRR4302545.9455651/94‑1 (MQ=60)
                                           AAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACT                                                   <  SRR4302545.7758370/94‑1 (MQ=60)
                                           AAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACT                                                   >  SRR4302545.2693945/1‑94 (MQ=60)
                                           AAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACT                                                   >  SRR4302545.4259714/1‑94 (MQ=60)
                                            AAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTG                                                  <  SRR4302545.4060749/94‑1 (MQ=60)
                                            AAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAAATG                                                  >  SRR4302545.3691400/1‑94 (MQ=60)
                                             AAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGG                                                 <  SRR4302545.8032798/94‑1 (MQ=60)
                                             AAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGG                                                 <  SRR4302545.10386352/94‑1 (MQ=60)
                                               GATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAA                                               >  SRR4302545.7512306/1‑94 (MQ=60)
                                               GATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAA                                               <  SRR4302545.3246216/94‑1 (MQ=60)
                                               GATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAA                                               <  SRR4302545.9901159/94‑1 (MQ=60)
                                                ATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAAC                                              >  SRR4302545.10151706/1‑94 (MQ=60)
                                                ATGGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAAC                                              <  SRR4302545.10386360/94‑1 (MQ=60)
                                                  TGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAA                                            <  SRR4302545.5206513/94‑1 (MQ=60)
                                                  TGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAA                                            <  SRR4302545.7631717/94‑1 (MQ=60)
                                                   GGCTATCGCCGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAGGATGAAACACACCAAACTGGGTCAAC                                           <  SRR4302545.9699163/94‑1 (MQ=60)
                                                   GGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAAC                                           >  SRR4302545.2555778/1‑94 (MQ=60)
                                                   GGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAAC                                           <  SRR4302545.2655587/94‑1 (MQ=60)
                                                    GCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACT                                          <  SRR4302545.4644529/94‑1 (MQ=60)
                                                    GCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGAGCGAAGATGAAAAACACCGCACTGGAACAACT                                          >  SRR4302545.2257251/1‑94 (MQ=60)
                                                    GCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGAGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACT                                          >  SRR4302545.7630300/1‑94 (MQ=60)
                                                     CTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGGACAACTG                                         >  SRR4302545.7053711/1‑94 (MQ=60)
                                                     CTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTG                                         <  SRR4302545.10495565/94‑1 (MQ=60)
                                                     CTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTG                                         <  SRR4302545.5655440/94‑1 (MQ=60)
                                                      TATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGA                                        >  SRR4302545.5564368/1‑94 (MQ=60)
                                                      TATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGA                                        <  SRR4302545.7717661/94‑1 (MQ=60)
                                                      TATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGA                                        <  SRR4302545.5828829/94‑1 (MQ=60)
                                                      TATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGA                                        >  SRR4302545.8963721/1‑94 (MQ=60)
                                                      TATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGA                                        >  SRR4302545.3637626/1‑94 (MQ=60)
                                                       ATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGAT                                       >  SRR4302545.6672500/1‑94 (MQ=60)
                                                       ATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGAT                                       <  SRR4302545.5003334/94‑1 (MQ=60)
                                                        TCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATT                                      >  SRR4302545.2672304/1‑94 (MQ=60)
                                                        TCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATT                                      <  SRR4302545.2149170/94‑1 (MQ=60)
                                                         CGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTA                                     >  SRR4302545.9282595/1‑94 (MQ=60)
                                                          GACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAA                                    <  SRR4302545.10274512/94‑1 (MQ=60)
                                                           ACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAAC                                   >  SRR4302545.4090108/1‑94 (MQ=60)
                                                           ACGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAAC                                   <  SRR4302545.8650474/94‑1 (MQ=60)
                                                            CGAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACG                                  >  SRR4302545.7455738/1‑94 (MQ=60)
                                                             GAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGA                                 >  SRR4302545.300295/1‑94 (MQ=60)
                                                             GAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGA                                 <  SRR4302545.9263107/94‑1 (MQ=60)
                                                             GAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGA                                 <  SRR4302545.6814675/94‑1 (MQ=60)
                                                             GAACTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGA                                 <  SRR4302545.9263108/94‑1 (MQ=60)
                                                                CTGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAA                              >  SRR4302545.10824977/1‑94 (MQ=60)
                                                                 TGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAA                             <  SRR4302545.5237047/94‑1 (MQ=60)
                                                                 TGGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAA                             >  SRR4302545.4669238/1‑94 (MQ=60)
                                                                  GGCGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAAC                            <  SRR4302545.5034043/94‑1 (MQ=60)
                                                                    CGAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTG                          <  SRR4302545.5352713/94‑1 (MQ=60)
                                                                     GAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGA                         <  SRR4302545.6451508/94‑1 (MQ=60)
                                                                     GAGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGA                         <  SRR4302545.2143457/94‑1 (MQ=60)
                                                                      AGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAA                        <  SRR4302545.259330/94‑1 (MQ=60)
                                                                      AGGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAA                        >  SRR4302545.9065445/1‑94 (MQ=60)
                                                                      AGGTAAAGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAA                        >  SRR4302545.2542770/1‑94 (MQ=60)
                                                                       ggttaatcaATGTTAACGGTGTGGCTATCAGAATACCGAAGGCTCGAAGGTGAAAACCACCGGAATGGAACAACTGATTAACGAAAAACTGAAC                       >  SRR4302545.442947/10‑94 (MQ=60)
                                                                       GGTAGCGTTATGTTAACGATGTGGCTATCAGAAGACGTAAGGCGCGAAGATGAAAAACACCAAACTGGAACAACTTATTAACGAAAAACTGAAC                       <  SRR4302545.496502/94‑1 (MQ=60)
                                                                       GGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAATTGAAC                       <  SRR4302545.496503/94‑1 (MQ=60)
                                                                       GGTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAAC                       <  SRR4302545.9831561/94‑1 (MQ=60)
                                                                        GTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACA                      <  SRR4302545.9610463/94‑1 (MQ=60)
                                                                        GTAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACA                      <  SRR4302545.9610461/94‑1 (MQ=60)
                                                                        GTAACGCGATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACA                      <  SRR4302545.8171520/94‑1 (MQ=60)
                                                                         TAACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAG                     >  SRR4302545.6252877/1‑94 (MQ=60)
                                                                          AACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGC                    >  SRR4302545.1084019/1‑94 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   <  SRR4302545.994964/94‑1 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   >  SRR4302545.7869449/1‑94 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   <  SRR4302545.7137579/94‑1 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   >  SRR4302545.7227735/1‑94 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   >  SRR4302545.1442594/1‑94 (MQ=60)
                                                                           ACGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCG                   <  SRR4302545.4684714/94‑1 (MQ=60)
                                                                            CGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGC                  >  SRR4302545.4895781/1‑94 (MQ=60)
                                                                            CGCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGC                  >  SRR4302545.88699/1‑94 (MQ=60)
                                                                            CGCTAAGTTACCGGTGTGGCTATCAGAATACGGACGGCGCGAAGATGAAAACCACCGAACTGGAACAACTGATTAACGAAAACCTGAACAGCGC                  <  SRR4302545.2686939/94‑1 (MQ=60)
                                                                             GCTATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCG                 >  SRR4302545.5160787/1‑94 (MQ=60)
                                                                               TATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGC               >  SRR4302545.6864887/1‑94 (MQ=60)
                                                                               TATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGC               >  SRR4302545.3440359/1‑94 (MQ=60)
                                                                                ATGTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCG              >  SRR4302545.3414331/1‑94 (MQ=60)
                                                                                  GTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAT            <  SRR4302545.100932/94‑1 (MQ=60)
                                                                                  GTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAT            <  SRR4302545.10835576/94‑1 (MQ=60)
                                                                                  GTTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGAT            <  SRR4302545.8850640/94‑1 (MQ=60)
                                                                                   TTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATT           <  SRR4302545.965408/94‑1 (MQ=60)
                                                                                   TTAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATT           >  SRR4302545.2573440/1‑94 (MQ=60)
                                                                                    TAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTA          <  SRR4302545.3581804/94‑1 (MQ=60)
                                                                                    TAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTA          >  SRR4302545.3270806/1‑94 (MQ=60)
                                                                                    TAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTA          <  SRR4302545.2125138/94‑1 (MQ=60)
                                                                                    TAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTA          <  SRR4302545.299565/94‑1 (MQ=60)
                                                                                    TAACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTA          >  SRR4302545.2457873/1‑94 (MQ=60)
                                                                                     AACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAG         <  SRR4302545.1948149/94‑1 (MQ=60)
                                                                                     AACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAG         <  SRR4302545.9507663/94‑1 (MQ=60)
                                                                                     AACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAG         <  SRR4302545.2492477/94‑1 (MQ=60)
                                                                                      ACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGT        <  SRR4302545.1286466/94‑1 (MQ=60)
                                                                                      ACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGT        <  SRR4302545.8277404/94‑1 (MQ=60)
                                                                                      ACGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGT        <  SRR4302545.2714118/94‑1 (MQ=60)
                                                                                       CGTTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTG       <  SRR4302545.2784360/94‑1 (MQ=60)
                                                                                       CGGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTG       <  SRR4302545.5153466/94‑1 (MQ=60)
                                                                                        GGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGA      <  SRR4302545.3956391/94‑1 (MQ=60)
                                                                                        GGTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGA      >  SRR4302545.4633575/1‑94 (MQ=60)
                                                                                         GTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGAT     <  SRR4302545.264202/94‑1 (MQ=60)
                                                                                         GTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGAT     >  SRR4302545.1646212/1‑94 (MQ=60)
                                                                                         GTGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGAT     <  SRR4302545.7863664/94‑1 (MQ=60)
                                                                                          TGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATT    <  SRR4302545.3138214/94‑1 (MQ=60)
                                                                                          TGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATT    <  SRR4302545.3138215/94‑1 (MQ=60)
                                                                                          TGTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATT    <  SRR4302545.4256105/94‑1 (MQ=60)
                                                                                           GTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTA   >  SRR4302545.4874606/1‑94 (MQ=60)
                                                                                           GTGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTA   >  SRR4302545.2853924/1‑94 (MQ=60)
                                                                                            TGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTAC  <  SRR4302545.2960932/94‑1 (MQ=60)
                                                                                            TGGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTAC  <  SRR4302545.6304729/94‑1 (MQ=60)
                                                                                             |                                                                                            
ACAATTTGCGTCTTTTGGCGTCGGGTTTGTTTCTTAATATGTCAAAAGATTGGCTATCGACGAACTGGCGAGGTAACGCTATGTTAACGGTGTAGCTATCAGAATACGGAAGGCGCGAAGATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTAC  >  NC_000913/741930‑742115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑