Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,155,098 |
T→C |
L605P (CTG→CCG) |
yegN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,155,098 | 0 | T | C | 98.8%
| 831.9
/ ‑3.5
| 248 | L605P (CTG→CCG) | yegN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (121/124); total (122/126) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 254 total aligned reads displayed.
CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGA > NC_000913/2155007‑2155188
|
cAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGa > 1:4625243/1‑94 (MQ=255)
aGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGAc > 2:9100659/1‑94 (MQ=255)
ggCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGAcc > 2:4512300/1‑94 (MQ=255)
ggCACCGCAACCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCCGACGTTATTTTGCAGGATCCGGCAGTGCAAAGCCCGAcc < 1:4164310/94‑1 (MQ=255)
cACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTc < 1:4377892/94‑1 (MQ=255)
cACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTc > 1:3979705/1‑94 (MQ=255)
aCCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCa < 2:3645729/94‑1 (MQ=255)
cGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCAtt > 1:8026096/1‑94 (MQ=255)
gCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCAttt < 1:9729101/94‑1 (MQ=255)
gCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCAttt < 1:1707627/94‑1 (MQ=255)
gCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGCCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCAttt < 1:7061636/94‑1 (MQ=255)
aaTCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATttgt > 1:560587/1‑94 (MQ=255)
aTCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATttgtt < 1:6820232/94‑1 (MQ=255)
aTCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATttgtt < 2:3264924/94‑1 (MQ=255)
tCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATttgttg > 1:6608690/1‑94 (MQ=255)
ccAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTgg < 2:6605728/94‑1 (MQ=255)
ccAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTgg > 2:10536527/1‑94 (MQ=255)
cAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGc > 1:1314114/1‑94 (MQ=255)
cAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGc > 1:4461564/1‑94 (MQ=255)
aGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCg < 2:10246955/94‑1 (MQ=255)
aGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCg > 2:8149184/1‑94 (MQ=255)
aGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCg < 2:10068403/94‑1 (MQ=255)
cTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGtt > 2:10148162/1‑94 (MQ=255)
tCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTg < 2:8262889/94‑1 (MQ=255)
tCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTg < 2:2521619/94‑1 (MQ=255)
tCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTg < 1:8898790/94‑1 (MQ=255)
ccTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGa > 2:21969/1‑94 (MQ=255)
tttGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATg < 2:5854787/94‑1 (MQ=255)
tttGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATg < 2:8852972/94‑1 (MQ=255)
ttGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATgg < 1:8602259/94‑1 (MQ=255)
ttGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATga < 1:2219609/94‑2 (MQ=255)
ccAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCAc > 1:617332/1‑94 (MQ=255)
ccAATATGGCCAAGCGACAACGCCAGGTCGCGGACGTGCTTTTGCAGGATCCGGCAGTGCAAAGCCCGACGTCATTTGTTGGCTTTCATGGCAc > 2:345863/1‑94 (MQ=255)
cAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACt > 2:1650118/1‑94 (MQ=255)
aaTATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTa > 2:2285642/1‑94 (MQ=255)
atatGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTaa < 1:1171260/94‑1 (MQ=255)
tatGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAc > 1:3580194/1‑94 (MQ=255)
tatGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAc < 1:1800027/94‑1 (MQ=255)
tatGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAc > 1:6456481/1‑94 (MQ=255)
tGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAccc < 2:8459659/94‑1 (MQ=255)
tGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTAGGCGTTGATGGCACTAAccc < 2:5471502/94‑1 (MQ=255)
ggCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCg < 2:9420176/94‑1 (MQ=255)
gCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGt < 1:9326634/94‑1 (MQ=255)
gccAGCGACAACGCCAGGTCGCGGACGGTATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTc < 2:9265839/93‑1 (MQ=255)
cccAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTc < 1:9192740/94‑1 (MQ=255)
ccAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCg > 1:8845677/1‑94 (MQ=255)
ccAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCg > 2:5052342/1‑94 (MQ=255)
aGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCCGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCt > 1:2849653/1‑94 (MQ=255)
gCGACAACGCCAGGTCGCGGACGGTATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTg < 1:9117818/94‑1 (MQ=255)
cAACGCCAGGTCGCGGACGTGATTTTGCAGGGTCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAAcg > 1:9091833/1‑93 (MQ=255)
cAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACa < 2:6227924/94‑1 (MQ=255)
cAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACa > 1:9574828/1‑94 (MQ=255)
cAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACa < 2:766482/94‑1 (MQ=255)
aaCGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAg > 1:5449228/1‑94 (MQ=255)
cGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTg > 1:7652779/1‑94 (MQ=255)
ccAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCa > 1:8362070/1‑94 (MQ=255)
ccAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCa < 2:4754018/94‑1 (MQ=255)
ccAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCa < 1:7095106/94‑1 (MQ=255)
cAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCAc < 2:7530196/94‑1 (MQ=255)
cggccgctGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGCCCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACg < 2:415642/90‑1 (MQ=255)
aGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACg > 2:5739810/1‑94 (MQ=255)
gcgGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTAc < 1:10538931/94‑1 (MQ=255)
cgGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACa < 2:8726859/94‑1 (MQ=255)
ggACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACaa > 2:1999006/1‑94 (MQ=255)
ggACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACaa > 1:10015370/1‑94 (MQ=255)
gACGTGCTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTGTGCaaa > 1:4134560/1‑94 (MQ=255)
gACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACaaa > 2:9633005/1‑94 (MQ=255)
aCGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAAt < 1:1253764/94‑1 (MQ=255)
aCGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAAt > 2:6473866/1‑94 (MQ=255)
cGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATc > 1:2264482/1‑94 (MQ=255)
cGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATc > 2:7204075/1‑94 (MQ=255)
tGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCaa > 1:9133379/1‑94 (MQ=255)
tGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCaa > 1:6808870/1‑94 (MQ=255)
aTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAcc > 2:2617903/1‑94 (MQ=255)
aTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAcc > 1:5004871/1‑94 (MQ=255)
aTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAcc > 1:5979470/1‑94 (MQ=255)
aTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAcc > 2:6554984/1‑94 (MQ=255)
ttGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCa < 2:5154660/94‑1 (MQ=255)
tGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCaa < 2:8035582/94‑1 (MQ=255)
tGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGAACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCaa > 2:1479364/1‑94 (MQ=255)
cAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAc > 1:10462925/1‑94 (MQ=255)
cAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAc < 2:10355633/94‑1 (MQ=255)
cAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGCTTACAAATCAACCTCAAAc > 2:9393948/1‑94 (MQ=255)
aGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAcc < 1:1913168/94‑1 (MQ=255)
ggATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCg < 2:7187445/94‑1 (MQ=255)
ggATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCg > 2:7915194/1‑94 (MQ=255)
gATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGt < 1:4015800/94‑1 (MQ=255)
aTCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGTACAGTGCACGTTTACAAATCAACCTCAAACCGtt < 1:3687100/94‑1 (MQ=255)
tCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTCTACAAATCAACCTCAAACCGTTg > 1:7211783/1‑94 (MQ=255)
ccGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTgg > 2:1939210/1‑94 (MQ=255)
cGGCAGTGCAAATCCCGACCTCATTTGCTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCGCGTTTACAAATTAACCTCAACCCGTTGGa > 1:1986029/1‑94 (MQ=255)
ggCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGAt < 1:9974996/94‑1 (MQ=255)
ggCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGAt < 2:2550973/94‑1 (MQ=255)
gCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATg < 2:3071710/94‑1 (MQ=255)
gCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATg < 1:1063209/94‑1 (MQ=255)
cAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGa < 1:8747782/94‑1 (MQ=255)
cAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGtg < 2:4829034/94‑1 (MQ=255)
aaGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGtgat < 1:4740053/94‑1 (MQ=255)
aaGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGtgat > 1:7162327/1‑94 (MQ=255)
aaGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGtgat < 1:10344144/94‑1 (MQ=255)
|
CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGA > NC_000913/2155007‑2155188
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCG > NC_000913/2155007‑2155191
|
CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGA > SRR4302545.4743500/1‑94 (MQ=60)
CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGA > SRR4302545.8619023/1‑94 (MQ=60)
AGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGAC < SRR4302545.1583661/94‑1 (MQ=60)
GGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACCTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACC < SRR4302545.6872185/94‑1 (MQ=60)
GGCACCGCAACCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCCGACGTTATTTTGCAGGATCCGGCAGTGCAAAGCCCGACC < SRR4302545.4268253/94‑1 (MQ=60)
CGCCGCAATCCAGCTCCTGTGACAACACGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGCCCTC < SRR4302545.4488998/94‑1 (MQ=60)
CACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTC > SRR4302545.4079258/1‑94 (MQ=60)
CACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTC < SRR4302545.4488686/94‑1 (MQ=60)
CCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCAT > SRR4302545.9475156/1‑94 (MQ=60)
CGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATT > SRR4302545.8254694/1‑94 (MQ=60)
GCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTT < SRR4302545.10018787/94‑1 (MQ=60)
GCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTT < SRR4302545.7256905/94‑1 (MQ=60)
GCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTT < SRR4302545.10018786/94‑1 (MQ=60)
GCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTT < SRR4302545.1748261/94‑1 (MQ=60)
GCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGCCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTT < SRR4302545.7256906/94‑1 (MQ=60)
AATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGT > SRR4302545.2164896/1‑94 (MQ=60)
AATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGT > SRR4302545.573157/1‑94 (MQ=60)
ATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTT > SRR4302545.3087688/1‑94 (MQ=60)
ATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTT < SRR4302545.7007346/94‑1 (MQ=60)
ATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTT < SRR4302545.7007630/94‑1 (MQ=60)
TCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTG > SRR4302545.6789685/1‑94 (MQ=60)
TCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTG < SRR4302545.9129477/94‑1 (MQ=60)
CCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGG < SRR4302545.10764227/94‑1 (MQ=60)
CAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGC > SRR4302545.1343289/1‑94 (MQ=60)
CAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGC > SRR4302545.4575362/1‑94 (MQ=60)
cggTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCG < SRR4302545.7372783/91‑1 (MQ=60)
AGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCG > SRR4302545.4875364/1‑94 (MQ=60)
TCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTG < SRR4302545.9157444/94‑1 (MQ=60)
TCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTG < SRR4302545.7752971/94‑1 (MQ=60)
TCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTG < SRR4302545.1099722/94‑1 (MQ=60)
CTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGAT > SRR4302545.9096103/1‑94 (MQ=60)
CTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGAT > SRR4302545.6417248/1‑94 (MQ=60)
TTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATG > SRR4302545.3753280/1‑94 (MQ=60)
TTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGG < SRR4302545.8851177/94‑1 (MQ=60)
TTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGA < SRR4302545.2273791/94‑1 (MQ=60)
GCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCA < SRR4302545.463552/94‑1 (MQ=60)
CCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCAC > SRR4302545.631201/1‑94 (MQ=60)
CAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACT < SRR4302545.6033995/94‑1 (MQ=60)
AATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTGATTTGTTGGCGTTGATGGCACTA > SRR4302545.7804032/1‑94 (MQ=60)
ATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAA < SRR4302545.1197200/94‑1 (MQ=60)
ATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAA < SRR4302545.1197201/94‑1 (MQ=60)
TATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAC > SRR4302545.3667594/1‑94 (MQ=60)
TATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAC > SRR4302545.6633005/1‑94 (MQ=60)
TATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAAC < SRR4302545.1843545/94‑1 (MQ=60)
ATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACC < SRR4302545.6726331/94‑1 (MQ=60)
TGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCC > SRR4302545.4985951/1‑94 (MQ=60)
GGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCG > SRR4302545.3851423/1‑94 (MQ=60)
GCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGT < SRR4302545.1355774/94‑1 (MQ=60)
GCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGT < SRR4302545.9600087/94‑1 (MQ=60)
CCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTC < SRR4302545.9462243/94‑1 (MQ=60)
CCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTA > SRR4302545.8126910/1‑94 (MQ=60)
CCAGCGACAACGCCAGGTCGCGGATGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCG > SRR4302545.9394893/1‑94 (MQ=60)
CCAGCGACAACGCCAGGTCGCGGATGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCC > SRR4302545.9394894/1‑94 (MQ=60)
CCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCG > SRR4302545.9102573/1‑94 (MQ=60)
AGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCCGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCT > SRR4302545.2918551/1‑94 (MQ=60)
GCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTG > SRR4302545.6922462/1‑94 (MQ=60)
GCGACAACGCCAGGTCGCGGACGGTATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTG < SRR4302545.9385363/94‑1 (MQ=60)
GACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTAGCTGAA > SRR4302545.1894931/1‑94 (MQ=60)
ACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAAC < SRR4302545.4632879/94‑1 (MQ=60)
CAACGCCAGGTCGCGGACGTGATTTTGCAGGGTCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACG > SRR4302545.9357985/1‑94 (MQ=60)
CAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACA > SRR4302545.9857045/1‑94 (MQ=60)
CAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAACCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACA > SRR4302545.10885925/1‑94 (MQ=60)
AACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAG > SRR4302545.5591902/1‑94 (MQ=60)
ACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGT > SRR4302545.4249068/1‑94 (MQ=60)
ACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGT < SRR4302545.10861349/94‑1 (MQ=60)
CGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTG < SRR4302545.1305844/94‑1 (MQ=60)
CGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTG > SRR4302545.7869326/1‑94 (MQ=60)
GCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGGCCTCATTTGTTGGCGTTGATGGCACTAGCCCGTCGCTGAACAGTGCA < SRR4302545.7291902/94‑1 (MQ=60)
CCATGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGCTGGCACTAACCCGTCGCTGAACAGTGTA > SRR4302545.1942260/1‑94 (MQ=60)
CCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCA < SRR4302545.7291599/94‑1 (MQ=60)
CCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCA > SRR4302545.2306459/1‑94 (MQ=60)
CCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCA > SRR4302545.8604271/1‑94 (MQ=60)
CAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCAC > SRR4302545.568598/1‑94 (MQ=60)
AGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACG < SRR4302545.1016796/94‑1 (MQ=60)
AGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACG < SRR4302545.4284669/94‑1 (MQ=60)
AGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACG > SRR4302545.9977320/1‑94 (MQ=60)
GTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTT > SRR4302545.180781/1‑94 (MQ=60)
GTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACACGTCGCTGAACAGTGCACGTT > SRR4302545.5313053/1‑94 (MQ=60)
CGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTA < SRR4302545.2023746/94‑1 (MQ=60)
GCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTAC < SRR4302545.10849373/94‑1 (MQ=60)
GCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTAC < SRR4302545.6162913/94‑1 (MQ=60)
GCGGACGTGAGTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTAC < SRR4302545.9439289/94‑1 (MQ=60)
GGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAA > SRR4302545.1228437/1‑94 (MQ=60)
GGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAA > SRR4302545.8112027/1‑94 (MQ=60)
GGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAA > SRR4302545.10312229/1‑94 (MQ=60)
GACGTGCTTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTGTGCAAA > SRR4302545.4237917/1‑94 (MQ=60)
GACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGaggctgaacgcgccccgtttacaaa > SRR4302545.2993239/1‑69 (MQ=60)
GACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAA > SRR4302545.4400446/1‑94 (MQ=60)
ACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAAT > SRR4302545.402259/1‑94 (MQ=60)
ACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAAT < SRR4302545.1281890/94‑1 (MQ=60)
CGTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATC > SRR4302545.2319565/1‑94 (MQ=60)
GTGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACGCGTCGCTGAACAGTGCACGTTTACAAATCA > SRR4302545.10651031/1‑94 (MQ=60)
TGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAA > SRR4302545.6995981/1‑94 (MQ=60)
TGATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAA > SRR4302545.9401604/1‑94 (MQ=60)
GATTTTGCAGGATCCGTCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCTCTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAC < SRR4302545.4819227/94‑1 (MQ=60)
GATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAAC < SRR4302545.52173/94‑1 (MQ=60)
ATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACC > SRR4302545.6140795/1‑94 (MQ=60)
ATTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACC > SRR4302545.5131702/1‑94 (MQ=60)
TTTTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCT < SRR4302545.6462655/94‑1 (MQ=60)
TTGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCA < SRR4302545.9659301/94‑1 (MQ=60)
TGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAA < SRR4302545.8696009/94‑1 (MQ=60)
TGCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAA < SRR4302545.9063211/94‑1 (MQ=60)
GCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAC > SRR4302545.9365373/1‑94 (MQ=60)
GCAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAA < SRR4302545.9263008/94‑1 (MQ=60)
CAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAC > SRR4302545.10771396/1‑94 (MQ=60)
CAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAC > SRR4302545.10771394/1‑94 (MQ=60)
CAGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGGTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAAC > SRR4302545.9252020/1‑94 (MQ=60)
AGGATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACC < SRR4302545.1960452/94‑1 (MQ=60)
GATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGT < SRR4302545.4116259/94‑1 (MQ=60)
GATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGT < SRR4302545.4116260/94‑1 (MQ=60)
ATCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGTACAGTGCACGTTTACAAATCAACCTCAAACCGTT < SRR4302545.3777342/94‑1 (MQ=60)
TCCGGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTCTACAAATCAACCTCAAACCGTTG > SRR4302545.7412845/1‑94 (MQ=60)
CGGCAGTGCAAATCCCGACCTCATTTGCTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCGCGTTTACAAATTAACCTCAACCCGTTGGA > SRR4302545.2035179/1‑94 (MQ=60)
GGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGAT < SRR4302545.10579006/94‑1 (MQ=60)
GGCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGAT < SRR4302545.10270840/94‑1 (MQ=60)
GCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATG > SRR4302545.7262905/1‑94 (MQ=60)
GCAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATG < SRR4302545.1086372/94‑1 (MQ=60)
CAGTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGA < SRR4302545.9001715/94‑1 (MQ=60)
GTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAAC < SRR4302545.2162993/94‑1 (MQ=60)
GTGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAAC < SRR4302545.4120001/94‑1 (MQ=60)
TGCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACG < SRR4302545.9525920/94‑1 (MQ=60)
GCAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGT < SRR4302545.731853/94‑1 (MQ=60)
CAAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTG > SRR4302545.893060/1‑94 (MQ=60)
AAAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGA < SRR4302545.7154402/94‑1 (MQ=60)
AAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGAT < SRR4302545.4861031/94‑1 (MQ=60)
AAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGAT > SRR4302545.7361226/1‑94 (MQ=60)
AAGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGAT < SRR4302545.10649057/94‑1 (MQ=60)
AGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATG < SRR4302545.2880975/94‑1 (MQ=60)
AGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATG < SRR4302545.4110210/94‑1 (MQ=60)
AGCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATG > SRR4302545.9809273/1‑94 (MQ=60)
GCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGA > SRR4302545.228280/1‑94 (MQ=60)
GCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGA < SRR4302545.6128037/94‑1 (MQ=60)
GCCCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGA > SRR4302545.8389794/1‑94 (MQ=60)
CCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATC > SRR4302545.5225957/1‑94 (MQ=60)
CCGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATC < SRR4302545.2955619/94‑1 (MQ=60)
CGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCG < SRR4302545.4184624/94‑1 (MQ=60)
CGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCG < SRR4302545.5701118/94‑1 (MQ=60)
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CAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCG > NC_000913/2155007‑2155191
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
