Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,419,101	T→C	L154P (CTG→CCG)	yfcG →	putative S‑transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,419,101	0	T	C	97.8%	905.7 / 4.1	274	L154P (CTG→CCG)	yfcG	putative S‑transferase
Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (134/134); total (137/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01

Only 100 of 297 total aligned reads displayed.

CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGG  >  NC_000913/2419010‑2419193

 aaaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCggg                                                                                           >  2:8249837/1‑94 (MQ=255)

   aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAg                                                                                         >  2:7788760/1‑94 (MQ=255)

   aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAg                                                                                         <  2:5215556/94‑1 (MQ=255)

   aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAg                                                                                         >  1:613705/1‑94 (MQ=255)

    ccATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAgg                                                                                        <  2:3951599/94‑1 (MQ=255)

    ccATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAgg                                                                                        >  1:6642794/1‑94 (MQ=255)

    ccATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAgg                                                                                        >  1:3269598/1‑94 (MQ=255)

     cATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGc                                                                                       >  2:7628024/1‑94 (MQ=255)

     cATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGc                                                                                       >  2:4016259/1‑94 (MQ=255)

      aTTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCg                                                                                      >  2:8337375/1‑94 (MQ=255)

       ttCCTTACGCTATTGAACGTTATCAGGTTGAAGCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCga                                                                                     <  2:7491420/94‑1 (MQ=255)

        tCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCgag                                                                                    >  1:10137772/1‑94 (MQ=255)

         ccTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCgaga                                                                                   >  2:3429744/1‑94 (MQ=255)

          cTTACGCTATTGAACGTTATCAGGTTGAAACTCTGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGaa                                                                                  <  2:10234662/94‑1 (MQ=255)

             aCGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTa                                                                               <  1:6769276/94‑1 (MQ=255)

             aCGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTa                                                                               <  2:2641509/94‑1 (MQ=255)

              cGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTAc                                                                              >  1:6381378/1‑94 (MQ=255)

               gCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACa                                                                             <  1:8279705/94‑1 (MQ=255)

                cTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAg                                                                            <  1:10477481/94‑1 (MQ=255)

                cTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAg                                                                            <  1:550391/94‑1 (MQ=255)

                 tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGc                                                                           >  2:4646964/1‑94 (MQ=255)

                 tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGc                                                                           >  1:10018143/1‑94 (MQ=255)

                 tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGc                                                                           <  2:9130023/94‑1 (MQ=255)

                  aTTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCa                                                                          <  2:5679551/94‑1 (MQ=255)

                     gAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTTCAGCATTg                                                                       >  1:2676448/1‑94 (MQ=255)

                      aaCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGc                                                                      <  2:4835101/94‑1 (MQ=255)

                      aaCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGc                                                                      >  1:2234847/1‑94 (MQ=255)

                       aCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCg                                                                     <  1:2111611/94‑1 (MQ=255)

                         gTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGa                                                                   <  2:9846796/94‑1 (MQ=255)

                         gTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGa                                                                   >  1:3604485/1‑94 (MQ=255)

                          ttATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGATGCGGGAACTACAGCATTGCGGat                                                                  >  2:9046822/1‑94 (MQ=255)

                            aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGatat                                                                >  1:1180801/1‑94 (MQ=255)

                            aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGatat                                                                >  1:4220215/1‑94 (MQ=255)

                             tCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATAtt                                                               <  2:9986294/94‑1 (MQ=255)

                              cAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTg                                                              >  1:1414745/1‑94 (MQ=255)

                               aGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGc                                                             >  1:1663755/1‑94 (MQ=255)

                                 gTTGAATCTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCct                                                           <  2:1387033/94‑1 (MQ=255)

                                 gTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCct                                                           <  1:5677287/94‑1 (MQ=255)

                                 gTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCct                                                           <  1:4724767/94‑1 (MQ=255)

                                   tGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgc                                                         >  2:7316424/1‑94 (MQ=255)

                                   tGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTCCGGATATTGCctgc                                                         <  2:7030526/94‑1 (MQ=255)

                                     aaaCTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg                                                       >  2:3901603/1‑94 (MQ=255)

                                     aaaCTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg                                                       <  2:1899128/94‑1 (MQ=255)

                                     aaaCTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg                                                       >  2:5429883/1‑94 (MQ=255)

                                      agcTCAGCGTCGTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTgg                                                      <  2:5921896/92‑1 (MQ=255)

                                      aaCTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTgg                                                      <  1:7834913/94‑1 (MQ=255)

                                        cTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGcc                                                    <  2:2946871/94‑1 (MQ=255)

                                         tCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCg                                                   >  1:8588484/1‑94 (MQ=255)

                                         tCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCg                                                   <  1:2441149/94‑1 (MQ=255)

                                          cAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAAGTACAGCATTGCGGATATTGCCTGCTGGcggg                                                  >  2:3732123/1‑91 (MQ=255)

                                          cAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCgg                                                  >  2:2115712/1‑93 (MQ=255)

                                          cAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGt                                                  >  2:7179228/1‑94 (MQ=255)

                                            acGTCTTTACCATGTTCTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTgg                                                <  1:9100745/93‑1 (MQ=255)

                                              gTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGt                                              >  1:7630018/1‑94 (MQ=255)

                                                cTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa                                            <  1:3745459/94‑1 (MQ=255)

                                                  ttACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAt                                          <  2:6536055/94‑1 (MQ=255)

                                                  ttACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAt                                          <  1:791183/94‑1 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg                                         >  1:3152700/1‑94 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg                                         <  1:5818565/94‑1 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg                                         <  2:4282204/94‑1 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg                                         <  2:5482649/94‑1 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATg                                         <  2:10288831/94‑1 (MQ=255)

                                                   tACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCATGGGTTAATg                                         >  1:6839046/1‑94 (MQ=255)

                                                    aCCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGc                                        <  1:9968429/94‑1 (MQ=255)

                                                     ccATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATTcc                                       >  1:4481467/1‑94 (MQ=255)

                                                     ccATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGcc                                       >  2:9810106/1‑94 (MQ=255)

                                                       aTGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg                                     <  1:8702539/94‑1 (MQ=255)

                                                       aTGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg                                     <  2:9575464/94‑1 (MQ=255)

                                                        tGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTgg                                    >  1:8490189/1‑94 (MQ=255)

                                                        tGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTgg                                    <  2:608583/94‑1 (MQ=255)

                                                           aCTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACt                                 >  2:8029070/1‑94 (MQ=255)

                                                            cTGAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTc                                >  2:8947309/1‑94 (MQ=255)

                                                              gAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGc                              >  2:380188/1‑94 (MQ=255)

                                                              gAACAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGc                              >  2:6326478/1‑94 (MQ=255)

                                                               aaCAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGcc                             >  1:4976988/1‑94 (MQ=255)

                                                                aCAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCa                            <  1:10241315/94‑1 (MQ=255)

                                                                aCAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCa                            <  1:2892459/94‑1 (MQ=255)

                                                                 cAAGCGGCTGGAAAGCTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAg                           <  1:401737/94‑1 (MQ=255)

                                                                 cAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAg                           <  2:6416053/94‑1 (MQ=255)

                                                                 cAAGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAg                           >  2:2510795/1‑94 (MQ=255)

                                                                   aGCTGCGGGAAAACTCGTCCTGGCCGGGAGGCCAGAACTACAGCATTGCGGTTATTGCCTGCTGGCCCTGGGGTAATGTCTGGACTCTCTAGCg                         >  1:9400462/1‑94 (MQ=255)

                                                                   aGCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCg                         <  2:8661033/94‑1 (MQ=255)

                                                                    gCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGa                        <  1:183838/94‑1 (MQ=255)

                                                                    gCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGa                        <  2:2342593/94‑1 (MQ=255)

                                                                    gCGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGa                        <  1:7451582/94‑1 (MQ=255)

                                                                     cGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGaa                       >  2:3064778/1‑94 (MQ=255)

                                                                     cGGCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGaa                       <  2:6578657/94‑1 (MQ=255)

                                                                      ggCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTAGCCAGCGact                      >  2:8470530/1‑92 (MQ=255)

                                                                       gCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAAtt                     <  1:5431252/94‑1 (MQ=255)

                                                                       gCTGGAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAAtt                     <  1:9866573/94‑1 (MQ=255)

                                                                          ggAAAACTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGAc                  >  1:8916665/1‑94 (MQ=255)

                                                                                cTCGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCa            >  1:9245282/1‑94 (MQ=255)

                                                                                  cGCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAAt          <  2:10602261/94‑1 (MQ=255)

                                                                                   gCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATg         <  1:5173641/94‑1 (MQ=255)

                                                                                   gCCCTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATg         >  2:1590867/1‑94 (MQ=255)

                                                                                    cccTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGt        <  1:4658809/94‑1 (MQ=255)

                                                                                     ccTGGCCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTa       >  2:8816396/1‑94 (MQ=255)

                                                                                      ctggccggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTAt      >  1:6998261/1‑94 (MQ=255)

                                                                                       tggccggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATc     >  1:5876889/1‑94 (MQ=255)

                                                                                        ggccggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATcc    >  1:4090501/1‑94 (MQ=255)

CAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGG  >  NC_000913/2419010‑2419193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGC  >  NC_000913/2419008‑2419194

CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CC                                                                                               >  SRR4302545.6591481/1‑94 (MQ=60)

CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CC                                                                                               <  SRR4302545.454533/94‑1 (MQ=60)

CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CC                                                                                               >  SRR4302545.6214803/1‑94 (MQ=60)

CCCAAACCATAGCTTACGCTATTGACCGTTATCAGCTTGAAACTCAGAGTCTTTACCATGTACTGAAAAAGCGGCTGGAAAACCCGCCCTGG‑CC                                                                                               <  SRR4302545.10252952/94‑1 (MQ=60)

 CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGAAAAACTCGCCCTGG‑CCG                                                                                              >  SRR4302545.4148827/1‑94 (MQ=60)

   AAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGG                                                                                            >  SRR4302545.3255340/1‑94 (MQ=60)

    AACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCCTGGG                                                                                            >  SRR4302545.9241426/1‑94 (MQ=60)

     ACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAG                                                                                          >  SRR4302545.627506/1‑94 (MQ=60)

      CCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGG                                                                                         >  SRR4302545.6824927/1‑94 (MQ=60)

      CCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGG                                                                                         >  SRR4302545.8808565/1‑94 (MQ=60)

      CCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGG                                                                                         >  SRR4302545.3349746/1‑94 (MQ=60)

       CATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGC                                                                                        >  SRR4302545.10202967/1‑94 (MQ=60)

         TTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGA                                                                                      <  SRR4302545.10565582/94‑1 (MQ=60)

          TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAG                                                                                     >  SRR4302545.10437581/1‑94 (MQ=60)

            CTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAA                                                                                   >  SRR4302545.10221604/1‑94 (MQ=60)

              TACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACT                                                                                 <  SRR4302545.235949/94‑1 (MQ=60)

              TACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACT                                                                                 <  SRR4302545.4325147/94‑1 (MQ=60)

              TACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACT                                                                                 >  SRR4302545.8122924/1‑94 (MQ=60)

               ACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTA                                                                                <  SRR4302545.6954938/94‑1 (MQ=60)

                CGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTAC                                                                               >  SRR4302545.6555832/1‑94 (MQ=60)

                 GCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACA                                                                              <  SRR4302545.8519514/94‑1 (MQ=60)

                 GCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACA                                                                              <  SRR4302545.8646939/94‑1 (MQ=60)

                  CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAG                                                                             <  SRR4302545.10786372/94‑1 (MQ=60)

                  CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAG                                                                             <  SRR4302545.562684/94‑1 (MQ=60)

                  CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAG                                                                             <  SRR4302545.7830695/94‑1 (MQ=60)

                   TATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGC                                                                            >  SRR4302545.1134065/1‑94 (MQ=60)

                   TATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGC                                                                            >  SRR4302545.10315070/1‑94 (MQ=60)

                     TTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCAT                                                                          >  SRR4302545.7352487/1‑94 (MQ=60)

                      TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAACCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCAAT                                                                         <  SRR4302545.10153791/94‑1 (MQ=60)

                      TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATT                                                                         <  SRR4302545.7069459/94‑1 (MQ=60)

                      TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATT                                                                         >  SRR4302545.9650101/1‑94 (MQ=60)

                      TGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATT                                                                         <  SRR4302545.6900193/94‑1 (MQ=60)

                       GAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTTCAGCATTG                                                                        >  SRR4302545.2740925/1‑94 (MQ=60)

                       GAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTG                                                                        <  SRR4302545.7444196/94‑1 (MQ=60)

                       GAACATTATCAGGTTGAAACTCATCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTG                                                                        <  SRR4302545.5650235/94‑1 (MQ=60)

                        AACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGATGCGAGAACTACAGCATTAC                                                                       >  SRR4302545.5646890/1‑94 (MQ=60)

                        AACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGC                                                                       >  SRR4302545.2289337/1‑94 (MQ=60)

                        AACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGC                                                                       <  SRR4302545.1707476/94‑1 (MQ=60)

                        AACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGC                                                                       >  SRR4302545.1295020/1‑94 (MQ=60)

                        AACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGC                                                                       >  SRR4302545.5646891/1‑94 (MQ=60)

                         ACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCG                                                                      <  SRR4302545.2163476/94‑1 (MQ=60)

                         ACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCG                                                                      >  SRR4302545.4687842/1‑94 (MQ=60)

                          CGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGG                                                                     >  SRR4302545.9293354/1‑94 (MQ=60)

                           GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAACCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGA                                                                    <  SRR4302545.4854682/94‑1 (MQ=60)

                           GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGT                                                                    >  SRR4302545.3692375/1‑94 (MQ=60)

                           GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGA                                                                    <  SRR4302545.3587412/94‑1 (MQ=60)

                           GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGA                                                                    >  SRR4302545.3692376/1‑94 (MQ=60)

                              ATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATAT                                                                 >  SRR4302545.4325644/1‑94 (MQ=60)

                              ATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATAT                                                                 >  SRR4302545.1207040/1‑94 (MQ=60)

                              ATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATAT                                                                 <  SRR4302545.10704274/94‑1 (MQ=60)

                               TCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATT                                                                >  SRR4302545.8823718/1‑94 (MQ=60)

                               TCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATT                                                                <  SRR4302545.10539144/94‑1 (MQ=60)

                                CAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTG                                                               >  SRR4302545.1446734/1‑94 (MQ=60)

                                 AGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGC                                                              >  SRR4302545.8423320/1‑94 (MQ=60)

                                 AGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGC                                                              >  SRR4302545.4287540/1‑94 (MQ=60)

                                 AGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGC                                                              >  SRR4302545.5420421/1‑94 (MQ=60)

                                 AGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGC                                                              >  SRR4302545.1703115/1‑94 (MQ=60)

                                  GGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCC                                                             >  SRR4302545.8909067/1‑94 (MQ=60)

                                   GTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAGCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCT                                                            <  SRR4302545.6932086/94‑1 (MQ=60)

                                   GTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCT                                                            <  SRR4302545.5828974/94‑1 (MQ=60)

                                   GTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCT                                                            <  SRR4302545.4845245/94‑1 (MQ=60)

                                     TGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGC                                                          >  SRR4302545.10378658/1‑94 (MQ=60)

                                      GAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCT                                                         <  SRR4302545.2263403/94‑1 (MQ=60)

                                       AAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAACCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTG                                                        <  SRR4302545.709798/94‑1 (MQ=60)

                                       AAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTG                                                        >  SRR4302545.2572814/1‑94 (MQ=60)

                                        AACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG                                                       >  SRR4302545.5979512/1‑94 (MQ=60)

                                        AACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG                                                       <  SRR4302545.6345310/94‑1 (MQ=60)

                                        AACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG                                                       <  SRR4302545.8056963/94‑1 (MQ=60)

                                        AACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG                                                       >  SRR4302545.1615588/1‑94 (MQ=60)

                                        AACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACCCGCCCCGG‑CCGGGAGGCGAGAACTACAGCATTGCGGAGATTGCCTGCGGG                                                       >  SRR4302545.9989251/1‑94 (MQ=60)

                                         ACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGC                                                      <  SRR4302545.3869394/94‑1 (MQ=60)

                                          CTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCC                                                     <  SRR4302545.5890839/94‑1 (MQ=60)

                                           TCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCG                                                    >  SRR4302545.8836962/1‑94 (MQ=60)

                                           TCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCG                                                    <  SRR4302545.2500291/94‑1 (MQ=60)

                                            CAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAACATTGCGGATATTGCCTGCTGGacgg                                                   >  SRR4302545.3955531/1‑90 (MQ=60)

                                             AGCGTCTTTACCATGTACTGAACCAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG                                                  <  SRR4302545.5971611/94‑1 (MQ=60)

                                             AGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG                                                  >  SRR4302545.7755236/1‑94 (MQ=60)

                                             AGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG                                                  <  SRR4302545.3162999/94‑1 (MQ=60)

                                              GCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGG                                                 <  SRR4302545.4134183/94‑1 (MQ=60)

                                              GCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGG                                                 <  SRR4302545.4134184/94‑1 (MQ=60)

                                              ACGTCTTTACCATGTTCTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGG                                                 <  SRR4302545.9367495/94‑1 (MQ=60)

                                               CGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGG                                                <  SRR4302545.4511582/94‑1 (MQ=60)

                                                GTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGT                                               <  SRR4302545.6156793/94‑1 (MQ=60)

                                                GTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGT                                               >  SRR4302545.7845934/1‑94 (MQ=60)

                                                 TCTTTCCCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGGGGCGAGAACCACAGCATTGCCGATATTACCTGCTGGCCGTGGGTT                                              >  SRR4302545.2167504/1‑94 (MQ=60)

                                                 TCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTT                                              >  SRR4302545.2745372/1‑94 (MQ=60)

                                                  CTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA                                             <  SRR4302545.4773347/94‑1 (MQ=60)

                                                  CTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA                                             >  SRR4302545.10541010/1‑94 (MQ=60)

                                                  CTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA                                             <  SRR4302545.3837666/94‑1 (MQ=60)

                                                   TTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAA                                            <  SRR4302545.4334228/94‑1 (MQ=60)

                                                    TTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAT                                           <  SRR4302545.808979/94‑1 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          <  SRR4302545.8698419/94‑1 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          >  SRR4302545.7915866/1‑94 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          <  SRR4302545.6730251/94‑1 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          >  SRR4302545.3230274/1‑94 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          >  SRR4302545.3269084/1‑94 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATG                                          <  SRR4302545.5975129/94‑1 (MQ=60)

                                                     TACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCATGGGTTAATG                                          >  SRR4302545.7026926/1‑94 (MQ=60)

                                                      ACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGC                                         <  SRR4302545.10264131/94‑1 (MQ=60)

                                                       CCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGGACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATTCC                                        >  SRR4302545.8876100/1‑94 (MQ=60)

                                                       CCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATTCC                                        >  SRR4302545.4595952/1‑94 (MQ=60)

                                                        CATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT                                       <  SRR4302545.5338929/94‑1 (MQ=60)

                                                         ATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG                                      <  SRR4302545.8954966/94‑1 (MQ=60)

                                                         ATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG                                      >  SRR4302545.5273137/1‑94 (MQ=60)

                                                         ATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCCGGAGGCGATAACTACAGCATTGCGGATATTGCCTGCctgccgtcggataatgcctt                                      >  SRR4302545.9827883/1‑74 (MQ=60)

                                                          TGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGG‑CTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGG                                     >  SRR4302545.8735551/1‑94 (MQ=60)

                                                          TGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGG                                     >  SRR4302545.946013/1‑94 (MQ=60)

                                                          TGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGG                                     <  SRR4302545.8161102/94‑1 (MQ=60)

                                                           GTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGA                                    <  SRR4302545.9505163/94‑1 (MQ=60)

                                                            TACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGAC                                   <  SRR4302545.5160005/94‑1 (MQ=60)

                                                            TACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGAC                                   <  SRR4302545.1922445/94‑1 (MQ=60)

                                                             ACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACT                                  >  SRR4302545.6362513/1‑94 (MQ=60)

                                                              CTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGGGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC                                 >  SRR4302545.377087/1‑94 (MQ=60)

                                                                GAACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGC                               >  SRR4302545.564340/1‑94 (MQ=60)

                                                                 AACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCC                              >  SRR4302545.5103042/1‑94 (MQ=60)

                                                                  ACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCA                             <  SRR4302545.10543693/94‑1 (MQ=60)

                                                                  ACAAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCA                             <  SRR4302545.2962539/94‑1 (MQ=60)

                                                                   CAAGCGGCTGGAAAGCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAG                            <  SRR4302545.410677/94‑1 (MQ=60)

                                                                   CAAGCGGCTGGAAACCTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAG                            <  SRR4302545.1543797/94‑1 (MQ=60)

                                                                    AAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGC                           >  SRR4302545.4879122/1‑94 (MQ=60)

                                                                    AAGCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGC                           <  SRR4302545.4814591/94‑1 (MQ=60)

                                                                      GCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGA                         <  SRR4302545.7662588/94‑1 (MQ=60)

                                                                      GCGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGA                         <  SRR4302545.187752/94‑1 (MQ=60)

                                                                       CGGCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAA                        <  SRR4302545.2507043/94‑1 (MQ=60)

                                                                         GCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATT                      <  SRR4302545.5573287/94‑1 (MQ=60)

                                                                         GCTGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATT                      <  SRR4302545.10159780/94‑1 (MQ=60)

                                                                           TGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGA                    <  SRR4302545.698403/94‑1 (MQ=60)

                                                                           TGGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGA                    >  SRR4302545.3138089/1‑94 (MQ=60)

                                                                            GGAAAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGAC                   >  SRR4302545.9175894/1‑94 (MQ=60)

                                                                               AAACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTA                <  SRR4302545.9402699/94‑1 (MQ=60)

                                                                                AACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAG               >  SRR4302545.9131732/1‑94 (MQ=60)

                                                                                AACTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAC               >  SRR4302545.9131734/1‑94 (MQ=60)

                                                                                  CTCGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCA             >  SRR4302545.9516347/1‑94 (MQ=60)

                                                                                    CGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAAT           >  SRR4302545.188974/1‑94 (MQ=60)

                                                                                    CGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAAT           <  SRR4302545.4808121/94‑1 (MQ=60)

                                                                                    CGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAAT           >  SRR4302545.2293355/1‑94 (MQ=60)

                                                                                    CGCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAAT           <  SRR4302545.3829085/94‑1 (MQ=60)

                                                                                     GCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATG          >  SRR4302545.2809766/1‑94 (MQ=60)

                                                                                     GCCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATG          <  SRR4302545.5306764/94‑1 (MQ=60)

                                                                                      GCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGT         <  SRR4302545.6733149/94‑1 (MQ=60)

                                                                                      CCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGT         <  SRR4302545.4777775/94‑1 (MQ=60)

                                                                                      CCCTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGT         >  SRR4302545.6206772/1‑94 (MQ=60)

                                                                                        CTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTAT       <  SRR4302545.1301796/94‑1 (MQ=60)

                                                                                        CTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTAT       >  SRR4302545.10910750/1‑94 (MQ=60)

                                                                                        CTGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTAT       >  SRR4302545.7191317/1‑94 (MQ=60)

                                                                                         TGG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATC      >  SRR4302545.6035294/1‑94 (MQ=60)

                                                                                          GG‑CGGGGAGGCGAGAACTACAGCATTGCGGATTTTGCCGGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCC     <  SRR4302545.8091418/94‑1 (MQ=60)

                                                                                          GG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCC     >  SRR4302545.4192920/1‑94 (MQ=60)

                                                                                          GG‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCC     <  SRR4302545.7891039/94‑1 (MQ=60)

                                                                                          GG‑CCGGGAGGCGAGAACTACAGAATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCC     <  SRR4302545.1726248/94‑1 (MQ=60)

                                                                                           G‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCG    <  SRR4302545.9553949/94‑1 (MQ=60)

                                                                                           G‑CCGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCG    <  SRR4302545.10307011/94‑1 (MQ=60)

                                                                                              CGGGAGGCGAGAGCTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGC  >  SRR4302545.6871560/1‑94 (MQ=60)

                                                                                              CGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTTGCCGTGGGTTAATGCCTGGACTCGCCAGCTAATTGACCTAGCAATtgaccctgc  >  SRR4302545.1121648/1‑85 (MQ=60)

CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGG‑CTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGC  >  NC_000913/2419008‑2419194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`