Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,475,572 A→G A26A (GCT→GCC)  dsdC ← D‑serine dehydratase (deaminase) transcriptional activator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,475,5720AG98.7% 1017.3 / 0.3 302A26A (GCT→GCC) dsdCD‑serine dehydratase (deaminase) transcriptional activator
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (128/169);  total (131/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 321 total aligned reads displayed.

ATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTT  >  NC_000913/2475481‑2475663
                                                                                           |                                                                                           
 ttcttcttcCAGCTGATTGATACGGTGGCTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGcc                                                                                          <  2:3185536/94‑1 (MQ=255)
 ttcttcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGcc                                                                                          >  2:1261386/1‑94 (MQ=255)
  tcttcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGGCTGATGCCTGGCGGCCa                                                                                         >  2:6723220/1‑94 (MQ=255)
   cttcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCAc                                                                                        >  2:1779268/1‑94 (MQ=255)
   cttcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCACGGCGAAGGACTGATGCCTGGCGGCCAc                                                                                        >  1:4128081/1‑94 (MQ=255)
    ttcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACt                                                                                       <  2:2338504/94‑1 (MQ=255)
     tcttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACtt                                                                                      <  1:6951545/94‑1 (MQ=255)
      cttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTc                                                                                     >  1:7439096/1‑94 (MQ=255)
       ttcCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCa                                                                                    <  2:4607517/94‑1 (MQ=255)
         ccAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCaaa                                                                                  >  1:2358366/1‑94 (MQ=255)
           aGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAg                                                                                <  2:6155457/94‑1 (MQ=255)
             cTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTa                                                                              <  1:1782695/94‑1 (MQ=255)
              tgattgatACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTAt                                                                             <  2:9020836/94‑1 (MQ=255)
               gattgatACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATg                                                                            <  2:9752742/94‑1 (MQ=255)
                  tgatACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAt                                                                         <  1:8354617/94‑1 (MQ=255)
                   gatACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAtt                                                                        <  2:9458342/94‑1 (MQ=255)
                    atACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAttt                                                                       >  1:3862424/1‑94 (MQ=255)
                    atACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAttt                                                                       >  2:6741676/1‑94 (MQ=255)
                     tACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAtttt                                                                      <  2:4860594/94‑1 (MQ=255)
                      aCGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAttttt                                                                     <  2:3781011/94‑1 (MQ=255)
                      aCGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAttttt                                                                     <  1:7849281/94‑1 (MQ=255)
                       cGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTg                                                                    >  1:5421474/1‑94 (MQ=255)
                         gTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGAt                                                                  <  2:2765666/94‑1 (MQ=255)
                           gACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATaa                                                                >  2:8330719/1‑94 (MQ=255)
                            aCTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAAt                                                               <  2:4232740/94‑1 (MQ=255)
                            aCTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAAt                                                               <  2:2084775/94‑1 (MQ=255)
                             cTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAAtt                                                              <  1:6223058/94‑1 (MQ=255)
                               tACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGc                                                            >  2:6866336/1‑94 (MQ=255)
                               tACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGc                                                            <  2:804281/94‑1 (MQ=255)
                                 ccGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCa                                                          <  2:6619281/94‑1 (MQ=255)
                                 ccGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCa                                                          <  2:7717083/94‑1 (MQ=255)
                                 ccGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCa                                                          >  2:8965658/1‑94 (MQ=255)
                                  cGCACTGGGGCTCAGCGACAATTCTTCTGCCGCCAGGGCGAAGGACGGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATGGCCAg                                                         <  2:1439426/94‑1 (MQ=255)
                                  cGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAg                                                         >  2:8145377/1‑94 (MQ=255)
                                  cGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAg                                                         <  2:5995287/94‑1 (MQ=255)
                                   gCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGTCTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGc                                                        <  1:5240404/94‑1 (MQ=255)
                                    cACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGcc                                                       <  2:5118835/94‑1 (MQ=255)
                                      cTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGt                                                     <  1:9320480/94‑1 (MQ=255)
                                       tGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGtt                                                    <  1:1238244/94‑1 (MQ=255)
                                         gggCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTaa                                                  <  2:6986702/94‑1 (MQ=255)
                                         gggCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTaa                                                  >  1:9905799/1‑94 (MQ=255)
                                           gCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagc                                                >  2:2516893/1‑94 (MQ=255)
                                           gCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATCGCCAGCCGTTAagc                                                <  1:1731722/94‑1 (MQ=255)
                                            cTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagca                                               <  1:7149909/94‑1 (MQ=255)
                                            cTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagca                                               <  1:6017302/94‑1 (MQ=255)
                                             tCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagcag                                              >  1:5071091/1‑94 (MQ=255)
                                             tCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagcag                                              <  2:1115221/94‑1 (MQ=255)
                                              cAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagcagc                                             <  2:5637412/94‑1 (MQ=255)
                                              cAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGCCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAagcagc                                             <  1:10527310/94‑1 (MQ=255)
                                               aGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGcc                                            >  2:6328139/1‑94 (MQ=255)
                                                gCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCg                                           <  2:5251253/94‑1 (MQ=255)
                                                gCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCg                                           <  1:6260041/94‑1 (MQ=255)
                                                gCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGACGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCg                                           <  1:9693485/94‑1 (MQ=255)
                                                 cGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGa                                          >  2:9065323/1‑94 (MQ=255)
                                                   aCAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAtt                                        >  1:3633954/1‑94 (MQ=255)
                                                   aCAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAtt                                        >  2:5017545/1‑94 (MQ=255)
                                                   aCAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAtt                                        <  1:5865197/94‑1 (MQ=255)
                                                    cAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAttt                                       <  2:7226050/94‑1 (MQ=255)
                                                    cAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAttt                                       <  1:1605784/94‑1 (MQ=255)
                                                      aTTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCt                                     >  1:5520013/1‑94 (MQ=255)
                                                       ttCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCtt                                    <  2:6487763/94‑1 (MQ=255)
                                                         ccTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAt                                  >  1:1041158/1‑94 (MQ=255)
                                                         ccTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAt                                  >  2:9621590/1‑94 (MQ=255)
                                                         ccTCTGCCGCCAGGGCGAAGGACTGATCCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAt                                  <  1:3071415/94‑1 (MQ=255)
                                                           tctGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAttt                                <  1:878809/94‑1 (MQ=255)
                                                            ctGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTc                               <  2:10119112/94‑1 (MQ=255)
                                                             tGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCa                              <  1:2181603/94‑1 (MQ=255)
                                                              gccgccAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCAc                             >  2:5482040/1‑94 (MQ=255)
                                                                cgccAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGa                           >  1:8634337/1‑94 (MQ=255)
                                                                cgccAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGa                           >  1:9024567/1‑94 (MQ=255)
                                                                 gccAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGaa                          >  2:1067086/1‑94 (MQ=255)
                                                                  gcAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAg                         <  2:5365509/93‑1 (MQ=255)
                                                                   cAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAgg                        >  2:3966911/1‑94 (MQ=255)
                                                                    aGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTTTTTCACGAAggg                       >  2:8885399/1‑94 (MQ=255)
                                                                    aGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAggg                       >  2:428095/1‑94 (MQ=255)
                                                                     gggCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAgggg                      <  1:10019033/94‑1 (MQ=255)
                                                                        cGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTc                   >  1:5967030/1‑94 (MQ=255)
                                                                        cGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTc                   <  1:6422314/94‑1 (MQ=255)
                                                                         gAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTCAGCAGCCGATTTCTTATTTCACGAAGGGGTTcc                  >  1:4639648/1‑94 (MQ=255)
                                                                          aaGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCa                 <  1:1546844/94‑1 (MQ=255)
                                                                          aaGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCa                 <  1:4842501/94‑1 (MQ=255)
                                                                            ggACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATa               >  2:9334819/1‑94 (MQ=255)
                                                                             gACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATaa              <  1:4998911/94‑1 (MQ=255)
                                                                              aCTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAt             <  2:34044/94‑1 (MQ=255)
                                                                              aCTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAt             <  1:10054508/94‑1 (MQ=255)
                                                                              aCTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAt             <  1:6804560/94‑1 (MQ=255)
                                                                                tGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCa           <  1:6328139/94‑1 (MQ=255)
                                                                                 gATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCAc          <  2:4698687/94‑1 (MQ=255)
                                                                                  aTGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCAcc         <  2:7812238/94‑1 (MQ=255)
                                                                                  aTGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCAcc         <  2:760552/94‑1 (MQ=255)
                                                                                  aTGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCAcc         >  2:7396134/1‑94 (MQ=255)
                                                                                  aTGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAACAGATTTCTTCTTTCACGCAGGGGTTCCATAATTAcc         >  1:4398787/1‑94 (MQ=255)
                                                                                     ccTGGGGGCCACTTCAAAAGTATGCATTTTTGATAATGGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      <  1:3379670/94‑1 (MQ=255)
                                                                                     ccTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      >  1:6563856/1‑94 (MQ=255)
                                                                                     ccTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      >  2:8697095/1‑94 (MQ=255)
                                                                                     ccTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      <  1:315486/94‑1 (MQ=255)
                                                                                     ccTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      >  1:8222933/1‑94 (MQ=255)
                                                                                     ccTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCa      <  2:2991404/94‑1 (MQ=255)
                                                                                      cTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCAt     <  2:5656920/94‑1 (MQ=255)
                                                                                       gggcggcCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCAtt    <  1:4234089/93‑1 (MQ=255)
                                                                                           |                                                                                           
ATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTT  >  NC_000913/2475481‑2475663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTC  >  NC_000913/2475479‑2475665
                                                                                             |                                                                                             
CAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCG                                                                                               >  SRR4302545.9380462/1‑94 (MQ=60)
 AATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGG                                                                                              <  SRR4302545.838430/94‑1 (MQ=60)
 AATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGG                                                                                              <  SRR4302545.5294887/94‑1 (MQ=60)
  ATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGC                                                                                             >  SRR4302545.5702663/1‑94 (MQ=60)
     CTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCAC                                                                                          >  SRR4302545.7051427/1‑94 (MQ=60)
     CTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCACGGCGAAGGACTGATGCCTGGCGGCCAC                                                                                          >  SRR4302545.4231305/1‑94 (MQ=60)
      TTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACT                                                                                         >  SRR4302545.4365291/1‑94 (MQ=60)
      TTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACT                                                                                         <  SRR4302545.1298853/94‑1 (MQ=60)
      TTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACT                                                                                         >  SRR4302545.6458193/1‑94 (MQ=60)
       TCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTT                                                                                        <  SRR4302545.7143206/94‑1 (MQ=60)
        CTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTC                                                                                       >  SRR4302545.3448975/1‑94 (MQ=60)
        CTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTC                                                                                       <  SRR4302545.8687690/94‑1 (MQ=60)
        CTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTC                                                                                       >  SRR4302545.7649635/1‑94 (MQ=60)
        CTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTC                                                                                       <  SRR4302545.3563293/94‑1 (MQ=60)
         TTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCA                                                                                      <  SRR4302545.867050/94‑1 (MQ=60)
           CCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAA                                                                                    >  SRR4302545.2415721/1‑94 (MQ=60)
           CCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAA                                                                                    >  SRR4302545.7031136/1‑94 (MQ=60)
           CCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAA                                                                                    <  SRR4302545.4790101/94‑1 (MQ=60)
           CCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAA                                                                                    >  SRR4302545.10859025/1‑94 (MQ=60)
             AGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAG                                                                                  <  SRR4302545.5574194/94‑1 (MQ=60)
              GCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGT                                                                                 <  SRR4302545.2542042/94‑1 (MQ=60)
               CTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTA                                                                                <  SRR4302545.1825527/94‑1 (MQ=60)
                TGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTAT                                                                               <  SRR4302545.3936471/94‑1 (MQ=60)
                TGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTAT                                                                               <  SRR4302545.6350876/94‑1 (MQ=60)
                 GATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATG                                                                              >  SRR4302545.2324206/1‑94 (MQ=60)
                    TGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAT                                                                           >  SRR4302545.6441361/1‑94 (MQ=60)
                    TGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCAT                                                                           <  SRR4302545.8596637/94‑1 (MQ=60)
                      ATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTT                                                                         >  SRR4302545.3958830/1‑94 (MQ=60)
                       TACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTT                                                                        <  SRR4302545.9631466/94‑1 (MQ=60)
                       TACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTT                                                                        <  SRR4302545.578239/94‑1 (MQ=60)
                       TACGGGGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTT                                                                        >  SRR4302545.6986822/1‑94 (MQ=60)
                        ACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTT                                                                       <  SRR4302545.8071845/94‑1 (MQ=60)
                        ACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTT                                                                       <  SRR4302545.7440675/94‑1 (MQ=60)
                         CGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTG                                                                      <  SRR4302545.8418026/94‑1 (MQ=60)
                         CGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTG                                                                      >  SRR4302545.5563154/1‑94 (MQ=60)
                          GGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGA                                                                     <  SRR4302545.10692810/94‑1 (MQ=60)
                           GTGACTTACCGCACTGTGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGAT                                                                    <  SRR4302545.2711879/94‑1 (MQ=60)
                             GACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAA                                                                  >  SRR4302545.5348199/1‑94 (MQ=60)
                              ACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAAT                                                                 >  SRR4302545.8461638/1‑94 (MQ=60)
                               CTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATT                                                                <  SRR4302545.6392582/94‑1 (MQ=60)
                               CTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATT                                                                >  SRR4302545.10390379/1‑94 (MQ=60)
                               CTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATT                                                                <  SRR4302545.6392581/94‑1 (MQ=60)
                               CTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATT                                                                <  SRR4302545.3435312/94‑1 (MQ=60)
                                   CCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCA                                                            >  SRR4302545.6604732/1‑94 (MQ=60)
                                   CCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCA                                                            <  SRR4302545.6032564/94‑1 (MQ=60)
                                   CCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCA                                                            <  SRR4302545.4669539/94‑1 (MQ=60)
                                    CGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAG                                                           <  SRR4302545.4146924/94‑1 (MQ=60)
                                     GCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGTCTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGC                                                          <  SRR4302545.5375640/94‑1 (MQ=60)
                                       ACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCG                                                        <  SRR4302545.3183272/94‑1 (MQ=60)
                                       ACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCG                                                        >  SRR4302545.1755822/1‑94 (MQ=60)
                                       ACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCG                                                        >  SRR4302545.1116032/1‑94 (MQ=60)
                                        CTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGT                                                       <  SRR4302545.9593761/94‑1 (MQ=60)
                                        CTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGT                                                       >  SRR4302545.5301564/1‑94 (MQ=60)
                                         TGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTT                                                      <  SRR4302545.1266156/94‑1 (MQ=60)
                                          GGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTA                                                     >  SRR4302545.6756021/1‑94 (MQ=60)
                                          GGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTA                                                     >  SRR4302545.4369539/1‑94 (MQ=60)
                                           GGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAA                                                    >  SRR4302545.6502390/1‑94 (MQ=60)
                                           GGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAA                                                    >  SRR4302545.10200074/1‑94 (MQ=60)
                                             GCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATCGCCAGCCGTTAAGC                                                  <  SRR4302545.1773100/94‑1 (MQ=60)
                                              CTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCA                                                 <  SRR4302545.9975349/94‑1 (MQ=60)
                                              CTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCA                                                 <  SRR4302545.6179753/94‑1 (MQ=60)
                                              CTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCA                                                 <  SRR4302545.1744486/94‑1 (MQ=60)
                                              CTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCA                                                 <  SRR4302545.7348366/94‑1 (MQ=60)
                                               TCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAG                                                >  SRR4302545.5200283/1‑94 (MQ=60)
                                                CAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGCCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGC                                               <  SRR4302545.10837451/94‑1 (MQ=60)
                                                 AGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCC                                              <  SRR4302545.6350687/94‑1 (MQ=60)
                                                  GCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCATCCG                                             <  SRR4302545.4161886/94‑1 (MQ=60)
                                                  GCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCG                                             <  SRR4302545.6430691/94‑1 (MQ=60)
                                                  GCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGACGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCG                                             <  SRR4302545.9981518/94‑1 (MQ=60)
                                                   CGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCAA                                            >  SRR4302545.6059398/1‑94 (MQ=60)
                                                    GACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGAT                                           >  SRR4302545.8239442/1‑94 (MQ=60)
                                                     ACATTTCCGCTACCGCCAGAGCCAAGAACTGATGCCTGACGGCCACTGCAAAAGTATGCATTTTTAACAATTGCCAGCCGTTAAGCAGCCGATT                                          <  SRR4302545.6023216/94‑1 (MQ=38)
                                                     ACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATT                                          <  SRR4302545.6023215/94‑1 (MQ=60)
                                                     ACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATT                                          >  SRR4302545.3722625/1‑94 (MQ=60)
                                                      CAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTT                                         <  SRR4302545.1643879/94‑1 (MQ=60)
                                                      CAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTT                                         <  SRR4302545.181324/94‑1 (MQ=60)
                                                      CAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAA                                                                                   >  SRR4302545.6665160/1‑52 (MQ=60)
                                                      CAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAA                                                                                   >  SRR4302545.6665161/1‑52 (MQ=60)
                                                       AATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTT                                        >  SRR4302545.8894679/1‑94 (MQ=60)
                                                       AATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTC                                        <  SRR4302545.476293/94‑1 (MQ=60)
                                                       AATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTC                                        >  SRR4302545.1791495/1‑94 (MQ=60)
                                                       AATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTC                                        >  SRR4302545.8894680/1‑94 (MQ=60)
                                                       AATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTC                                        >  SRR4302545.10755671/1‑94 (MQ=60)
                                                        ATTCCTCTGCCGCCAGGGGGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCT                                       <  SRR4302545.9047380/94‑1 (MQ=60)
                                                        ATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCT                                       >  SRR4302545.4818065/1‑94 (MQ=60)
                                                        ATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCT                                       >  SRR4302545.5665679/1‑94 (MQ=60)
                                                        ATTCCTCTGCCGCCAGGGCGAAGGACTGATGACTGACGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCT                                       >  SRR4302545.1618862/1‑94 (MQ=60)
                                                         TTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTT                                      >  SRR4302545.539190/1‑94 (MQ=60)
                                                          TCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTA                                     <  SRR4302545.7210446/94‑1 (MQ=60)
                                                          TCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTA                                     <  SRR4302545.8016126/94‑1 (MQ=60)
                                                          TCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTA                                     >  SRR4302545.5179085/1‑94 (MQ=60)
                                                           CCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAT                                    >  SRR4302545.1450799/1‑94 (MQ=60)
                                                           CCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAT                                    >  SRR4302545.4262775/1‑94 (MQ=60)
                                                           CCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAT                                    >  SRR4302545.1063898/1‑94 (MQ=60)
                                                           CCTCTGCCGCCAGGGCGAAGGACTGATCCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTAT                                    <  SRR4302545.3146751/94‑1 (MQ=60)
                                                            CTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATT                                   >  SRR4302545.2080231/1‑94 (MQ=60)
                                                             TCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTT                                  <  SRR4302545.6983490/94‑1 (MQ=60)
                                                             TCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTT                                  <  SRR4302545.898537/94‑1 (MQ=60)
                                                             TCTGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTT                                  >  SRR4302545.9245450/1‑94 (MQ=60)
                                                               TGCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCA                                <  SRR4302545.2234914/94‑1 (MQ=60)
                                                                GCCGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCAC                               <  SRR4302545.6520434/94‑1 (MQ=60)
                                                                  CGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGA                             <  SRR4302545.844961/94‑1 (MQ=60)
                                                                  CGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGA                             >  SRR4302545.8884734/1‑94 (MQ=60)
                                                                  CGCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGA                             >  SRR4302545.9287467/1‑94 (MQ=60)
                                                                   GCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAA                            <  SRR4302545.2048283/94‑1 (MQ=60)
                                                                   GCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAA                            >  SRR4302545.9427283/1‑94 (MQ=60)
                                                                   GCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAA                            <  SRR4302545.9467149/94‑1 (MQ=60)
                                                                   GCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAA                            >  SRR4302545.10135185/1‑94 (MQ=60)
                                                                   GCCAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAA                            >  SRR4302545.5657287/1‑94 (MQ=60)
                                                                     CAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGG                          <  SRR4302545.1312500/94‑1 (MQ=60)
                                                                     CAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGG                          <  SRR4302545.5027688/94‑1 (MQ=60)
                                                                     CAGGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGG                          <  SRR4302545.10782079/94‑1 (MQ=60)
                                                                      CGGGCGAAGGGCTGATGCCCGGCGGCCACTTCAAGAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGG                         <  SRR4302545.3794213/94‑1 (MQ=60)
                                                                       GGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGG                        <  SRR4302545.10169862/94‑1 (MQ=60)
                                                                       GGGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGG                        <  SRR4302545.10315983/94‑1 (MQ=60)
                                                                        GGCGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGT                       >  SRR4302545.6211490/1‑94 (MQ=60)
                                                                          CGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTC                     >  SRR4302545.538788/1‑94 (MQ=60)
                                                                          CGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTC                     >  SRR4302545.6128005/1‑94 (MQ=60)
                                                                          CGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTC                     <  SRR4302545.6597896/94‑1 (MQ=60)
                                                                          CGAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTC                     >  SRR4302545.6418676/1‑94 (MQ=60)
                                                                           GAAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTCAGCAGCCGATTTCTTATTTCACGAAGGGGTTCC                    >  SRR4302545.4758191/1‑94 (MQ=60)
                                                                           GAAGGACTGATGCCTGGCCGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCC                    >  SRR4302545.4758189/1‑94 (MQ=60)
                                                                            AAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCA                   <  SRR4302545.4965950/94‑1 (MQ=60)
                                                                            AAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCA                   <  SRR4302545.1583167/94‑1 (MQ=60)
                                                                            AAGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCA                   <  SRR4302545.3593717/94‑1 (MQ=60)
                                                                             AGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCAT                  >  SRR4302545.6179405/1‑94 (MQ=60)
                                                                             AGGACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCAT                  <  SRR4302545.72972/94‑1 (MQ=60)
                                                                               GACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAA                <  SRR4302545.5125524/94‑1 (MQ=60)
                                                                                ACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAT               <  SRR4302545.10352121/94‑1 (MQ=60)
                                                                                ACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAT               <  SRR4302545.5068481/94‑1 (MQ=60)
                                                                                ACTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAAT               <  SRR4302545.6991530/94‑1 (MQ=60)
                                                                                 CTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATC              <  SRR4302545.1599487/94‑1 (MQ=60)
                                                                                 CTGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTCCTTATTTCACGAAGGGGTTCCATAATC              <  SRR4302545.5403132/94‑1 (MQ=60)
                                                                                  TGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCA             >  SRR4302545.9187178/1‑94 (MQ=60)
                                                                                  TGATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCA             <  SRR4302545.6500722/94‑1 (MQ=60)
                                                                                    ATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACC           >  SRR4302545.3882111/1‑94 (MQ=60)
                                                                                    ATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACC           >  SRR4302545.6703790/1‑94 (MQ=60)
                                                                                    ATGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAACAGATTTCTTCTTTCACGCAGGGGTTCCATAATTACC           >  SRR4302545.4510319/1‑94 (MQ=60)
                                                                                     TGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATCATCACCT          >  SRR4302545.10319382/1‑94 (MQ=60)
                                                                                     TGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCT          <  SRR4302545.2240933/94‑1 (MQ=60)
                                                                                     TGCCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCT          >  SRR4302545.10319381/1‑94 (MQ=60)
                                                                                       CCTGGGGGCCACTTCAAAAGTATGCATTTTTGATAATGGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        <  SRR4302545.3462050/94‑1 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        <  SRR4302545.8378785/94‑1 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        >  SRR4302545.2366376/1‑94 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        >  SRR4302545.6743454/1‑94 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        <  SRR4302545.322162/94‑1 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        >  SRR4302545.6164971/1‑94 (MQ=60)
                                                                                       CCTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCA        >  SRR4302545.8461013/1‑94 (MQ=60)
                                                                                        CTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCAT       <  SRR4302545.3161686/94‑1 (MQ=60)
                                                                                        CTGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCAT       <  SRR4302545.7590363/94‑1 (MQ=60)
                                                                                         TGGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATT      <  SRR4302545.4327913/94‑1 (MQ=60)
                                                                                          GGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCTGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTT     <  SRR4302545.5197892/94‑1 (MQ=60)
                                                                                          GGCGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTT     <  SRR4302545.7721662/94‑1 (MQ=60)
                                                                                            CGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTT   >  SRR4302545.687049/1‑94 (MQ=60)
                                                                                            CGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTT   <  SRR4302545.4383357/94‑1 (MQ=60)
                                                                                            CGGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTT   >  SRR4302545.5944216/1‑94 (MQ=60)
                                                                                             GGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTC  <  SRR4302545.314880/94‑1 (MQ=60)
                                                                                             CGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTC  <  SRR4302545.2295092/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGGCAGCCACTTCAAAAGTATGCATTTTTGATAATTGCCAGCCGTTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTC  >  NC_000913/2475479‑2475665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑