Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,567,072 |
T→C |
I154V (ATT→GTT) |
b2453 ← |
EutG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,567,072 | 0 | T | C | 98.4%
| 867.8
/ 1.1
| 256 | I154V (ATT→GTT) | b2453 | EutG |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (121/131); total (123/133) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.26e-01 |
Only 100 of 269 total aligned reads displayed.
GCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGG > NC_000913/2566981‑2567161
|
cATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGc < 1:7976831/94‑1 (MQ=255)
cATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGc > 2:8426903/1‑94 (MQ=255)
aTGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCa > 2:1785364/1‑94 (MQ=255)
gggCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAAt < 1:8423270/94‑1 (MQ=255)
ggCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATc > 1:9277781/1‑94 (MQ=255)
ggCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATc < 2:6670487/94‑1 (MQ=255)
gCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCa < 1:6384405/94‑1 (MQ=255)
gCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCa > 2:2991492/1‑94 (MQ=255)
cTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGTTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAg < 1:974220/94‑1 (MQ=255)
tAACACCTGCTTGCGCCCGCTCACCGCGTCGATGATCCCCGTTACATTGGTGGTTTCCAAGCCCGTTCCGGCGGTAGTTGGAACGGCAATCAGc > 2:6516474/1‑94 (MQ=255)
tAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGc > 2:7171832/1‑94 (MQ=255)
tAACACCTGCTTGCGCCCGCTCACCGAGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGCTGGAACGGAAATAAGc > 2:3842746/1‑94 (MQ=255)
aaCACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCg > 2:740333/1‑94 (MQ=255)
aaCACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGGAGTTGGCACGGCAATCAGCg > 2:464597/1‑94 (MQ=255)
acacCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCgg > 1:10406193/1‑94 (MQ=255)
ccTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCaa < 1:1485746/94‑1 (MQ=255)
gCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgcg < 1:2424002/94‑1 (MQ=255)
gCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgcg > 2:9058148/1‑94 (MQ=255)
cTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgcgc < 1:3855341/94‑1 (MQ=255)
gcCCGCTCACCGCGGCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATAAGCGACAAGCGGGGATg > 1:6114602/1‑94 (MQ=255)
cccGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGc < 1:7322127/94‑1 (MQ=255)
cccGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGc > 2:27224/1‑94 (MQ=255)
cGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAg > 2:1651868/1‑94 (MQ=255)
cGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAg > 2:10597741/1‑94 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAAc < 1:9014676/94‑1 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAAc < 2:1185778/94‑1 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAAc > 2:6288454/1‑94 (MQ=255)
cACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACg < 2:3164506/94‑1 (MQ=255)
cACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACg > 1:976666/1‑94 (MQ=255)
cACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACg < 1:230714/94‑1 (MQ=255)
aCCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGc > 1:9164319/1‑94 (MQ=255)
ccGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCt < 2:198317/94‑1 (MQ=255)
gcgTCGCTTATCTCCGTTAGATTGGTCGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTgg < 1:50820/94‑1 (MQ=255)
gcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTgg < 1:8839982/94‑1 (MQ=255)
gcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTgg < 1:8317058/94‑1 (MQ=255)
cgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGt > 2:9245775/1‑94 (MQ=255)
gTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGtt > 2:5659287/1‑94 (MQ=255)
gTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGtt < 1:3533465/94‑1 (MQ=255)
tCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGttt < 2:9861977/94‑1 (MQ=255)
cGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTc > 2:8774443/1‑94 (MQ=255)
cGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTc < 1:1804969/94‑1 (MQ=255)
gATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCt < 2:4226423/94‑1 (MQ=255)
aTAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTg > 2:9567174/1‑94 (MQ=255)
aaTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGaa > 1:10037426/1‑93 (MQ=255)
aaTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAc > 1:4601488/1‑94 (MQ=255)
aTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATAAGCGGAAAGCGAGGTTGCAGAACGCTGGTTTCTGACa > 1:9565905/1‑94 (MQ=255)
cACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAtc > 2:3404293/1‑94 (MQ=255)
aCCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAtct < 2:10485321/94‑1 (MQ=255)
gTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTg > 2:2854377/1‑94 (MQ=255)
gTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTg > 2:1456483/1‑94 (MQ=255)
tACATTGTTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGcc < 1:6477107/94‑1 (MQ=255)
aCATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCa < 1:7544901/94‑1 (MQ=255)
cATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAg > 1:8882645/1‑94 (MQ=255)
aTTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGc > 1:2155298/1‑94 (MQ=255)
ttGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCg < 2:937544/94‑1 (MQ=255)
ttGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCCGGTTTCTGACATCTCTGCCAGCg < 1:4877967/94‑1 (MQ=255)
tggtggTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGt < 2:860277/94‑1 (MQ=255)
tggtggTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGGTTCTGACATCTCTGCCAGCGt > 1:8599518/1‑94 (MQ=255)
ggtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTg > 1:7834600/1‑94 (MQ=255)
gtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGc < 1:9885843/94‑1 (MQ=255)
tggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCt > 2:4458699/1‑94 (MQ=255)
ggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTa < 2:2031668/94‑1 (MQ=255)
tttCAGAGCCTGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATc < 1:1147320/94‑1 (MQ=255)
tCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCg < 2:6096722/94‑1 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg > 2:123069/1‑94 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg < 1:3622276/94‑1 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg > 1:6005787/1‑94 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg > 2:9684128/1‑94 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg < 1:834801/94‑1 (MQ=255)
agagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCggg < 1:6874564/94‑1 (MQ=255)
agagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCggg < 1:1995739/94‑1 (MQ=255)
gagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGt > 2:7715120/1‑94 (MQ=255)
gagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGt < 1:5120325/94‑1 (MQ=255)
agCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGtt < 2:4325820/94‑1 (MQ=255)
agCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGtt > 2:5243890/1‑94 (MQ=255)
agCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGtt < 1:9910735/94‑1 (MQ=255)
agCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGtt > 1:3359627/1‑94 (MQ=255)
gCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTc > 1:4528528/1‑94 (MQ=255)
ccGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCg > 2:8196590/1‑94 (MQ=255)
ccGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCg < 1:5400693/94‑1 (MQ=255)
cGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGt > 1:8109388/1‑94 (MQ=255)
cGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGt < 2:6146692/94‑1 (MQ=255)
ggTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTc > 1:6192504/1‑94 (MQ=255)
ggTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTc < 2:390051/94‑1 (MQ=255)
gTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCa < 1:4043394/94‑1 (MQ=255)
gTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCa < 1:7166544/94‑1 (MQ=255)
ttCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCAc < 1:1099021/94‑1 (MQ=255)
cggcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAg > 1:1301537/1‑94 (MQ=255)
ggcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGc < 2:9751578/94‑1 (MQ=255)
gcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCa < 1:10215229/94‑1 (MQ=255)
gcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCa > 1:6943414/1‑94 (MQ=255)
gcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCa < 1:4304453/94‑1 (MQ=255)
cggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCaa > 1:681869/1‑94 (MQ=255)
cggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTCACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCaa < 2:10068931/94‑1 (MQ=255)
ggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAAc > 1:3245671/1‑94 (MQ=255)
tAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCCACGt > 1:674316/1‑94 (MQ=255)
aGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTc > 2:5897080/1‑94 (MQ=255)
ttGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCAc > 1:5251494/1‑94 (MQ=255)
tGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACg > 2:8272556/1‑94 (MQ=255)
tGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACg < 2:2258784/94‑1 (MQ=255)
|
GCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGG > NC_000913/2566981‑2567161
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTT > NC_000913/2566979‑2567164
|
AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAAC < SRR4302545.9598417/94‑1 (MQ=60)
GGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACG > SRR4302545.3809826/1‑94 (MQ=60)
GCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGG > SRR4302545.9427349/1‑94 (MQ=60)
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGC < SRR4302545.8203639/94‑1 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302545.3636586/94‑1 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA > SRR4302545.10141743/1‑94 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302545.5116374/94‑1 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302545.77835/94‑1 (MQ=60)
TGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAA < SRR4302545.10715990/94‑1 (MQ=60)
GGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAAT < SRR4302545.8666918/94‑1 (MQ=60)
GGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATC > SRR4302545.9549805/1‑94 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA < SRR4302545.8343838/94‑1 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA > SRR4302545.1395879/1‑94 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA > SRR4302545.10659930/1‑94 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA < SRR4302545.6558947/94‑1 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA > SRR4302545.7139157/1‑94 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGTTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG < SRR4302545.996000/94‑1 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG < SRR4302545.9437710/94‑1 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG < SRR4302545.8588515/94‑1 (MQ=60)
AACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCG < SRR4302545.8901515/94‑1 (MQ=60)
AACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGGAGTTGGAACGGCAATCAGCG > SRR4302545.1915910/1‑94 (MQ=60)
AACACCTACTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCG > SRR4302545.10731487/1‑94 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG > SRR4302545.10712937/1‑94 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG > SRR4302545.2841032/1‑94 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG > SRR4302545.8713390/1‑94 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG < SRR4302545.6969715/94‑1 (MQ=60)
CACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGC < SRR4302545.6690640/94‑1 (MQ=60)
ACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCA > SRR4302545.4664033/1‑94 (MQ=60)
CCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAA < SRR4302545.1520043/94‑1 (MQ=60)
CTGCTGGTGCCCACTCACCGCTTCGATAATCACCGTTTCATTGGTGGTTTCAGAGCCGGTTCCGGCCGTAGTTGGAACGGCAATCAGCGGCAAG < SRR4302545.9330305/94‑1 (MQ=60)
GCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCG < SRR4302545.2482734/94‑1 (MQ=60)
CTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGGGC > SRR4302545.6649258/1‑94 (MQ=60)
CTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGC < SRR4302545.3951583/94‑1 (MQ=60)
CTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGC > SRR4302545.2064243/1‑94 (MQ=60)
CTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGC < SRR4302545.8437098/94‑1 (MQ=60)
GCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGT < SRR4302545.1166621/94‑1 (MQ=60)
CGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTT < SRR4302545.1053239/94‑1 (MQ=60)
CGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGATT < SRR4302545.2403811/94‑1 (MQ=60)
GCCCGCTCACCGCGGCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATAAGCGACAAGCGGGGATG > SRR4302545.6280837/1‑94 (MQ=60)
CCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGC < SRR4302545.7527518/94‑1 (MQ=60)
CCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGC < SRR4302545.7123679/94‑1 (MQ=60)
CGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAG < SRR4302545.7109320/94‑1 (MQ=60)
CGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAG < SRR4302545.992935/94‑1 (MQ=60)
CTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAA < SRR4302545.1216840/94‑1 (MQ=60)
CTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATAAGCGGCAAGCGCGGTTGCAGAA > SRR4302545.6352136/1‑94 (MQ=60)
TCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAAC < SRR4302545.9277205/94‑1 (MQ=60)
CACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACG < SRR4302545.4329943/94‑1 (MQ=60)
CACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACG > SRR4302545.998474/1‑94 (MQ=60)
CACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACG < SRR4302545.235501/94‑1 (MQ=60)
ACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGC < SRR4302545.2425725/94‑1 (MQ=60)
ACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGC > SRR4302545.9433269/1‑94 (MQ=60)
CCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT < SRR4302545.3549477/94‑1 (MQ=60)
CCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT < SRR4302545.6420995/94‑1 (MQ=60)
CGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTG < SRR4302545.6739295/94‑1 (MQ=60)
GCGTCGCTTATCTCCGTTAGATTGGTCGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGG < SRR4302545.51984/94‑1 (MQ=60)
GCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGG < SRR4302545.7431426/94‑1 (MQ=60)
GCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGG < SRR4302545.8558079/94‑1 (MQ=60)
GCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGG < SRR4302545.9096673/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT < SRR4302545.8116257/94‑1 (MQ=60)
GTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTT < SRR4302545.3620029/94‑1 (MQ=60)
TCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTT < SRR4302545.5225264/94‑1 (MQ=60)
CGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTC > SRR4302545.10111275/1‑94 (MQ=60)
CGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTC < SRR4302545.1848632/94‑1 (MQ=60)
CGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTC < SRR4302545.10204580/94‑1 (MQ=60)
GATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCT < SRR4302545.6339691/94‑1 (MQ=60)
GATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCT < SRR4302545.4819910/94‑1 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG > SRR4302545.1196324/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG < SRR4302545.7724701/94‑1 (MQ=60)
AATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAC > SRR4302545.4719274/1‑94 (MQ=60)
AATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAA > SRR4302545.10334723/1‑94 (MQ=60)
ATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATAAGCGGAAAGCGAGGTTGCAGAACGCTGGTTTCTGACA > SRR4302545.9847883/1‑94 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT > SRR4302545.4558684/1‑94 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT < SRR4302545.3423721/94‑1 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGAAGAACGCGGGTTTCTGCCAT > SRR4302545.3605904/1‑94 (MQ=60)
CACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATC > SRR4302545.6280677/1‑94 (MQ=60)
ACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCT > SRR4302545.3770057/1‑94 (MQ=60)
ACCGTTACATTGGTGGTTTCAGACCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCT < SRR4302545.6004939/94‑1 (MQ=60)
CCGTTGCATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTC < SRR4302545.8310539/94‑1 (MQ=60)
CCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTC > SRR4302545.3965606/1‑94 (MQ=60)
CGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCT < SRR4302545.5487812/94‑1 (MQ=60)
CCTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCT > SRR4302545.926536/1‑94 (MQ=60)
GTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTG < SRR4302545.2233904/94‑1 (MQ=60)
GTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTG < SRR4302545.8602435/94‑1 (MQ=60)
tgacattgtttgtatgAGAGCCGGTACCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCTGTTGCAGAACGCTGGTTTCTGACATCTCTGC < SRR4302545.1432524/78‑1 (MQ=60)
TACATTGTTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCC < SRR4302545.6654184/94‑1 (MQ=60)
ACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCA < SRR4302545.7758247/94‑1 (MQ=60)
CATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAG > SRR4302545.695886/1‑94 (MQ=60)
CATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAG > SRR4302545.9140767/1‑94 (MQ=60)
CATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGCTGCAGAACGCTGGTTTCTGACCTCTCTGCCAG > SRR4302545.6180288/1‑94 (MQ=60)
ATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGC > SRR4302545.2208012/1‑94 (MQ=60)
ATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGC > SRR4302545.1345247/1‑94 (MQ=60)
TTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCG > SRR4302545.1810595/1‑94 (MQ=60)
TTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCCGGTTTCTGACATCTCTGCCAGCG < SRR4302545.5001997/94‑1 (MQ=60)
TGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGT < SRR4302545.7234723/94‑1 (MQ=60)
TGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGGTTCTGACATCTCTGCCAGCGT > SRR4302545.8848347/1‑94 (MQ=60)
GGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTG > SRR4302545.8056638/1‑94 (MQ=60)
GTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGC < SRR4302545.527319/94‑1 (MQ=60)
GTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGC < SRR4302545.10179578/94‑1 (MQ=60)
GGGGTTTCAGAGCCGGCTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGCTGCAGAACGCTGGTTTCTGGCATCTCTGCCAGCGCGC > SRR4302545.10620220/1‑94 (MQ=60)
TGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCT > SRR4302545.7658443/1‑94 (MQ=60)
GGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTA < SRR4302545.5403402/94‑1 (MQ=60)
GTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTAT < SRR4302545.3628291/94‑1 (MQ=60)
TTTCAGAGCCTGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATC < SRR4302545.1172467/94‑1 (MQ=60)
TTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCC > SRR4302545.4838159/1‑94 (MQ=60)
TTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCC < SRR4302545.884561/94‑1 (MQ=60)
TTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCC > SRR4302545.8230247/1‑94 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG > SRR4302545.6167921/1‑94 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG < SRR4302545.853533/94‑1 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG < SRR4302545.9142026/94‑1 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG < SRR4302545.3710608/94‑1 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGG < SRR4302545.2045098/94‑1 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGG > SRR4302545.8652974/1‑94 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGG < SRR4302545.7063509/94‑1 (MQ=60)
GAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGT < SRR4302545.5251587/94‑1 (MQ=60)
GAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGT > SRR4302545.865108/1‑94 (MQ=60)
AGCCGTTTCCGGCGGTAGTTGGACCGGCAATCAGCGGCAAGCGCGGTTGAAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT < SRR4302545.10195775/94‑1 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT > SRR4302545.3441604/1‑94 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT > SRR4302545.9591466/1‑94 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT < SRR4302545.6395652/94‑1 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT < SRR4302545.10205128/94‑1 (MQ=60)
GCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTC > SRR4302545.4644565/1‑94 (MQ=60)
CCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCG < SRR4302545.2728257/94‑1 (MQ=60)
CCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCG < SRR4302545.5541484/94‑1 (MQ=60)
CGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGT > SRR4302545.9140022/1‑94 (MQ=60)
CGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGT > SRR4302545.8343306/1‑94 (MQ=60)
GGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTC > SRR4302545.6361038/1‑94 (MQ=60)
GGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGCTCGTC > SRR4302545.4496104/1‑94 (MQ=60)
GTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCA < SRR4302545.7365577/94‑1 (MQ=60)
GTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCA < SRR4302545.4144635/94‑1 (MQ=60)
TTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCAC > SRR4302545.1928029/1‑94 (MQ=60)
TTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCAC < SRR4302545.2130693/94‑1 (MQ=60)
TTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCAC < SRR4302545.1122909/94‑1 (MQ=60)
TCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACC > SRR4302545.373467/1‑94 (MQ=60)
TCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGGTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATacggctctctgacc > SRR4302545.373468/1‑80 (MQ=60)
CGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAG > SRR4302545.1330439/1‑94 (MQ=60)
GGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGC < SRR4302545.4340622/94‑1 (MQ=60)
GCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCA > SRR4302545.7134818/1‑94 (MQ=60)
GCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCA < SRR4302545.4412848/94‑1 (MQ=60)
GCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCA < SRR4302545.10516941/94‑1 (MQ=60)
CGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAA > SRR4302545.10055210/1‑94 (MQ=60)
CGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAA > SRR4302545.697079/1‑94 (MQ=60)
GGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAAC > SRR4302545.8017860/1‑94 (MQ=60)
GGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAAC > SRR4302545.3325347/1‑94 (MQ=60)
TAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCCACGT > SRR4302545.689338/1‑94 (MQ=60)
AGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTC > SRR4302545.10203897/1‑94 (MQ=60)
GTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCA > SRR4302545.9954649/1‑94 (MQ=60)
TTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCAC > SRR4302545.10471701/1‑94 (MQ=60)
TTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCAC > SRR4302545.5387158/1‑94 (MQ=60)
TGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCACCGTCACG > SRR4302545.7038831/1‑94 (MQ=60)
TGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACG < SRR4302545.5385565/94‑1 (MQ=60)
TGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACG > SRR4302545.9846980/1‑94 (MQ=60)
TGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACG < SRR4302545.5076317/94‑1 (MQ=60)
GGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGG > SRR4302545.9192362/1‑94 (MQ=60)
ACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTT > SRR4302545.6043398/1‑94 (MQ=60)
ACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTT > SRR4302545.4000722/1‑94 (MQ=60)
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AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTT > NC_000913/2566979‑2567164
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
