Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,567,072 |
T→C |
I154V (ATT→GTT) |
b2453 ← |
EutG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,567,072 | 0 | T | C | 99.6%
| 787.3
/ ‑5.3
| 228 | I154V (ATT→GTT) | b2453 | EutG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (104/123); minor base G (0/1); total (104/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 235 total aligned reads displayed.
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGG > NC_000913/2566982‑2567161
|
cATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACgg < 1:4955207/93‑1 (MQ=255)
cATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACgg < 1:2352739/93‑1 (MQ=255)
aTGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCATAGCCGGTTCCGGCGGTAGTTGGAACGGc > 2:5518986/1‑93 (MQ=255)
aTGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGc > 1:5533277/1‑93 (MQ=255)
aTGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGc < 1:2400074/93‑1 (MQ=255)
tGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCa > 2:5983401/1‑93 (MQ=255)
ggCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAAt < 2:4540636/93‑1 (MQ=255)
gCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATc < 1:4989161/93‑1 (MQ=255)
gCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATc < 2:1494892/93‑1 (MQ=255)
gCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATc < 1:1445187/93‑1 (MQ=255)
cTACCACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCa < 2:603554/93‑1 (MQ=255)
cTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCa < 2:3301939/93‑1 (MQ=255)
accgcTGCTTGCGCCCGCTCACCTCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCg < 2:5127362/89‑1 (MQ=255)
ccTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCa < 1:88635/93‑1 (MQ=255)
cTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCaa < 1:5985087/93‑1 (MQ=255)
cTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCaa > 2:5498674/1‑93 (MQ=255)
tGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAg > 2:3526846/1‑93 (MQ=255)
gCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgc < 2:797242/93‑1 (MQ=255)
gCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgc < 1:5844323/93‑1 (MQ=255)
ttGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAgcgc > 2:2172811/1‑93 (MQ=255)
tGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGcgcg < 1:3595542/93‑1 (MQ=255)
gcgcCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCgg < 1:3889930/93‑1 (MQ=255)
gcgcCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCgg > 1:533468/1‑93 (MQ=255)
ctcccGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGt < 2:1164118/91‑1 (MQ=255)
gcCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGtt > 2:1641560/1‑93 (MQ=255)
ccGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGc < 2:1534527/93‑1 (MQ=255)
cGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCa > 1:6311848/1‑93 (MQ=255)
cGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCa > 2:2544385/1‑93 (MQ=255)
cGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCa < 2:1839387/93‑1 (MQ=255)
ccTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAg < 1:313231/92‑1 (MQ=255)
cTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGa > 2:1439814/1‑93 (MQ=255)
cTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGa < 1:4888422/93‑1 (MQ=255)
cTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGGAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGa > 2:3816161/1‑93 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGaa > 2:1336010/1‑93 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGaa > 1:4327292/1‑93 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGaa > 2:5080190/1‑93 (MQ=255)
tCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGaa > 2:3221274/1‑93 (MQ=255)
ccACCGCGCCGATAATCACCGTTACATTGGTGGGTCCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGaa < 2:6134329/92‑1 (MQ=255)
cACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAAc < 2:6099725/93‑1 (MQ=255)
ccGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGc < 1:4574839/93‑1 (MQ=255)
ccGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGc < 2:2276786/93‑1 (MQ=255)
ccGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGc < 1:4051427/93‑1 (MQ=255)
ccGCGTCGATAAGTACCGGTACATGGGTGGTTTCAGAGCCGGTTCCGGCGGCAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGc < 1:5077711/93‑1 (MQ=255)
cgcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCt < 1:657719/93‑1 (MQ=255)
gcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTg > 2:1005278/1‑93 (MQ=255)
gcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTg > 2:4984946/1‑93 (MQ=255)
gcgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTg > 2:831371/1‑93 (MQ=255)
cgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTgg < 1:774425/93‑1 (MQ=255)
cgTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTgg < 1:5733198/93‑1 (MQ=255)
gTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGt > 1:3227246/1‑93 (MQ=255)
aTAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCt < 1:2095839/93‑1 (MQ=255)
aTAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCt > 1:5578707/1‑93 (MQ=255)
tAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCtt > 1:6376884/1‑92 (MQ=255)
aaTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAAGGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGa < 1:4550064/93‑1 (MQ=255)
aaTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGa < 2:5325772/93‑1 (MQ=255)
aTCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAc > 2:3757154/1‑93 (MQ=255)
tCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACa < 1:1092866/93‑1 (MQ=255)
tCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACa < 1:1233736/93‑1 (MQ=255)
aCCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAtc > 1:4187200/1‑93 (MQ=255)
ccGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGGGGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGGTTCTGACAtct > 2:2238298/1‑93 (MQ=255)
gTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATctct > 1:3517917/1‑93 (MQ=255)
tACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGc < 2:3921/93‑1 (MQ=255)
tACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGc < 1:4256276/93‑1 (MQ=255)
aTTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAg > 1:4834474/1‑93 (MQ=255)
aTTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAg > 2:2990975/1‑93 (MQ=255)
tggtggTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCg < 2:3859223/93‑1 (MQ=255)
ggtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGt < 1:1507591/93‑1 (MQ=255)
ggtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGt < 2:4248092/93‑1 (MQ=255)
gtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTg > 2:5423803/1‑93 (MQ=255)
gtggtTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTg > 1:2996564/1‑93 (MQ=255)
ggtTTCAGAGCCGGTTCCGGCGGCAGTTGGAACGGCAATCAGCGGCAAGAGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCt > 2:3417633/1‑93 (MQ=255)
tttCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTAt > 1:3834859/1‑93 (MQ=255)
tCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATcc > 2:2071614/1‑93 (MQ=255)
tCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATcc < 2:3319915/93‑1 (MQ=255)
cAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCg < 1:1025364/93‑1 (MQ=255)
agagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCgg < 2:6442977/93‑1 (MQ=255)
gagCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTCTCCggg > 1:1793821/1‑93 (MQ=255)
agCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGt > 2:4273425/1‑93 (MQ=255)
gCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGtt < 1:2693657/93‑1 (MQ=255)
gCCGGTTCCGGCGGGAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCATCGTGCTATCCGGGtt > 1:1734847/1‑93 (MQ=255)
ccGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTc > 1:3754881/1‑93 (MQ=255)
ccGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTc < 1:2795267/93‑1 (MQ=255)
ggTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGt < 1:5356469/93‑1 (MQ=255)
gTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTc > 1:2006157/1‑93 (MQ=255)
gTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTc > 2:5869092/1‑93 (MQ=255)
ttCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCa > 1:1653048/1‑93 (MQ=255)
ttCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTAGTCa > 2:5107837/1‑93 (MQ=255)
ttCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGCGCTATCCGGGCTCGTCa > 2:747334/1‑93 (MQ=255)
ccGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCAcc < 2:961171/93‑1 (MQ=255)
cggcggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCa > 2:3078809/1‑93 (MQ=255)
cggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCa > 2:2650631/1‑93 (MQ=255)
ggTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCaa > 1:6335356/1‑93 (MQ=255)
ggTAGTGGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCaa < 1:2821700/93‑1 (MQ=255)
tAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACg < 1:1158266/93‑1 (MQ=255)
aGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGt < 2:5544768/93‑1 (MQ=255)
aGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGt > 2:4753409/1‑93 (MQ=255)
gTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTc < 1:195408/93‑1 (MQ=255)
gTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTc > 2:3458248/1‑93 (MQ=255)
tGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCAc < 2:560554/93‑1 (MQ=255)
ggAACGGCAATAAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATACGGGTTCGTCACCAGCCACGTCACg > 2:2844271/1‑93 (MQ=255)
|
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGG > NC_000913/2566982‑2567161
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTTT > NC_000913/2566979‑2567165
|
AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGGAGTTGGAAC > SRR4302537.6292956/1‑94 (MQ=60)
GCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGG < SRR4302537.4273598/94‑1 (MQ=60)
GCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGG < SRR4302537.1296981/94‑1 (MQ=60)
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGC < SRR4302537.2369327/94‑1 (MQ=60)
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGC > SRR4302537.841289/1‑94 (MQ=60)
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGC < SRR4302537.4989372/94‑1 (MQ=60)
CATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGC > SRR4302537.5571047/1‑94 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302537.2416978/94‑1 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302537.1141397/94‑1 (MQ=60)
ATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCA < SRR4302537.2312737/94‑1 (MQ=60)
GGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAAT < SRR4302537.3612205/94‑1 (MQ=60)
GGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATC < SRR4302537.1973160/94‑1 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA < SRR4302537.4140095/94‑1 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA < SRR4302537.5023547/94‑1 (MQ=60)
GCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCA < SRR4302537.1455258/94‑1 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG < SRR4302537.157677/94‑1 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG < SRR4302537.1255994/94‑1 (MQ=60)
CTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAG > SRR4302537.4908905/1‑94 (MQ=60)
TAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGC < SRR4302537.5475787/94‑1 (MQ=60)
AACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCG > SRR4302537.5567837/1‑94 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG < SRR4302537.4905382/94‑1 (MQ=60)
ACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGG < SRR4302537.5626550/94‑1 (MQ=60)
CACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGC > SRR4302537.3781788/1‑94 (MQ=60)
CCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAA < SRR4302537.89276/94‑1 (MQ=60)
cttcgggcgcgCGCTCACCGCGTCGATAATCGCCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAG < SRR4302537.4508051/83‑1 (MQ=60)
CTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAG < SRR4302537.6026160/94‑1 (MQ=60)
TGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGC < SRR4302537.4583634/94‑1 (MQ=60)
GCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCG < SRR4302537.5884395/94‑1 (MQ=60)
CTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGC > SRR4302537.120002/1‑94 (MQ=60)
TTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCG < SRR4302537.5861720/94‑1 (MQ=60)
TGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGG < SRR4302537.3620884/94‑1 (MQ=60)
TGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGG > SRR4302537.537129/1‑94 (MQ=60)
GCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGT < SRR4302537.3917136/94‑1 (MQ=60)
GCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTG > SRR4302537.2150664/1‑94 (MQ=60)
CCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGC > SRR4302537.926580/1‑94 (MQ=60)
CCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCA > SRR4302537.6355055/1‑94 (MQ=60)
CCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCA < SRR4302537.775887/94‑1 (MQ=60)
CGCTCACCGCGTCGATAATCACCGTTACATTGGAGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCCGCGGCAAGCGCGGTTGCAG > SRR4302537.4956522/1‑94 (MQ=60)
CCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGA < SRR4302537.315398/94‑1 (MQ=60)
CTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGTCAAGCGCGGTTGCAGAA > SRR4302537.1082168/1‑94 (MQ=60)
CTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAA > SRR4302537.4357370/1‑94 (MQ=60)
CTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAA < SRR4302537.4922177/94‑1 (MQ=60)
TCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAAC < SRR4302537.4333384/94‑1 (MQ=60)
CCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT > SRR4302537.4526600/1‑94 (MQ=60)
CCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT < SRR4302537.4606502/94‑1 (MQ=60)
CCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT < SRR4302537.4079758/94‑1 (MQ=60)
CCGCGTCGATAAGTACCGGTACATGGGTGGTTTCAGAGCCGGTTCCGGCGGCAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCT < SRR4302537.5112666/94‑1 (MQ=60)
CGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTG < SRR4302537.662201/94‑1 (MQ=60)
GCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGG < SRR4302537.4112366/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT < SRR4302537.5772446/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT > SRR4302537.3249960/1‑94 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT > SRR4302537.5588371/1‑94 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT < SRR4302537.779729/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT < SRR4302537.274410/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGT < SRR4302537.2864288/94‑1 (MQ=60)
CGTCGATAATCACCGTTACATGGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGGACGCTGGT < SRR4302537.2550811/94‑1 (MQ=60)
GTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTT < SRR4302537.2831689/94‑1 (MQ=60)
GTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTT < SRR4302537.6366825/94‑1 (MQ=60)
GATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCT > SRR4302537.5616836/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTT > SRR4302537.6420368/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG < SRR4302537.2110617/94‑1 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG > SRR4302537.4219609/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG > SRR4302537.5037307/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTG > SRR4302537.5371848/1‑94 (MQ=60)
ATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGGTGCAGAACGCTGGTTTCTG > SRR4302537.1836735/1‑94 (MQ=60)
AATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAAGGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAC < SRR4302537.4581554/94‑1 (MQ=60)
AATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAC < SRR4302537.4989451/94‑1 (MQ=60)
AATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGAC > SRR4302537.4642605/1‑94 (MQ=60)
ATCACCGTTCCATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCCGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACA < SRR4302537.3875240/94‑1 (MQ=60)
ATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACA < SRR4302537.2780333/94‑1 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT < SRR4302537.6407281/94‑1 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT < SRR4302537.1100412/94‑1 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT < SRR4302537.1242317/94‑1 (MQ=60)
TCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACAT < SRR4302537.4062499/94‑1 (MQ=60)
CACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATC > SRR4302537.4216435/1‑94 (MQ=60)
ACCGTTACATTGGTTGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCT > SRR4302537.3165788/1‑94 (MQ=60)
ACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCT < SRR4302537.1184750/94‑1 (MQ=60)
ACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCT > SRR4302537.5068425/1‑94 (MQ=60)
CGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCT > SRR4302537.3542807/1‑94 (MQ=60)
CGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCT < SRR4302537.6130953/94‑1 (MQ=60)
TACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCC > SRR4302537.6496455/1‑94 (MQ=60)
TACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCC < SRR4302537.4285857/94‑1 (MQ=60)
TACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCC > SRR4302537.1549419/1‑94 (MQ=60)
CATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAG > SRR4302537.4867854/1‑94 (MQ=60)
GGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTG < SRR4302537.1518111/94‑1 (MQ=60)
GGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTG > SRR4302537.3017458/1‑94 (MQ=60)
GTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGC > SRR4302537.6463379/1‑94 (MQ=60)
GGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTA > SRR4302537.2382960/1‑94 (MQ=60)
GGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTA < SRR4302537.3041165/94‑1 (MQ=60)
GTTTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTAT > SRR4302537.3861735/1‑94 (MQ=60)
TTCAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCC < SRR4302537.3641349/94‑1 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG < SRR4302537.2039572/94‑1 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG > SRR4302537.6196414/1‑94 (MQ=60)
CAGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGG < SRR4302537.1032420/94‑1 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTCTCCGGG > SRR4302537.1806338/1‑94 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGG > SRR4302537.1737604/1‑94 (MQ=60)
AGAGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGG > SRR4302537.1458895/1‑94 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT < SRR4302537.3255319/94‑1 (MQ=60)
AGCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTT > SRR4302537.3131830/1‑94 (MQ=60)
AGCCGGTTCCGGCGGGAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCATCGTGCTATCCGGGTT > SRR4302537.1746948/1‑94 (MQ=60)
GCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTC < SRR4302537.2712481/94‑1 (MQ=60)
GCCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTC > SRR4302537.3781248/1‑94 (MQ=60)
CCGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCG < SRR4302537.2814809/94‑1 (MQ=60)
CGGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGT > SRR4302537.1777196/1‑94 (MQ=60)
GGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTC > SRR4302537.2020130/1‑94 (MQ=60)
GGTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTC < SRR4302537.5393157/94‑1 (MQ=60)
GTTCCGGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCA > SRR4302537.1664637/1‑94 (MQ=60)
GGCGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGC < SRR4302537.972461/94‑1 (MQ=60)
CGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAA > SRR4302537.5765916/1‑94 (MQ=60)
CGGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAA > SRR4302537.6378666/1‑94 (MQ=60)
GGTAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAAC < SRR4302537.5976859/94‑1 (MQ=60)
GGTAGTGGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAAC < SRR4302537.2841426/94‑1 (MQ=60)
TAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGT < SRR4302537.1166326/94‑1 (MQ=60)
TAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGT < SRR4302537.3806901/94‑1 (MQ=60)
TAGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGT > SRR4302537.3313519/1‑94 (MQ=60)
AGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTC > SRR4302537.5174931/1‑94 (MQ=60)
AGTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTC > SRR4302537.4545948/1‑94 (MQ=60)
GTTGGAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCA < SRR4302537.196798/94‑1 (MQ=60)
GAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGC < SRR4302537.1915919/94‑1 (MQ=60)
GAACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGC > SRR4302537.3183050/1‑94 (MQ=60)
AACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCT < SRR4302537.629924/94‑1 (MQ=60)
AACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGGTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTTACCAGCAACGTCACGGCT > SRR4302537.1573506/1‑94 (MQ=60)
ACGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTT > SRR4302537.2265270/1‑94 (MQ=60)
CGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTTT < SRR4302537.783413/94‑1 (MQ=60)
CGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTTT < SRR4302537.5431848/94‑1 (MQ=60)
|
AGGCATGGGCTAACACCTGCTTGCGCCCGCTCACCGCGTCGATAATCACCGTTACATTGGTGGTTTCAGAGCCGGTTCCGGCGGTAGTTGGAATGGCAATCAGCGGCAAGCGCGGTTGCAGAACGCTGGTTTCTGACATCTCTGCCAGCGTGCTATCCGGGTTCGTCACCAGCAACGTCACGGCTTT > NC_000913/2566979‑2567165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
