Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG > NC_000913/2582907‑2583093
|
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTG > SRR4302545.3191873/1‑94 (MQ=60)
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTG < SRR4302545.3265854/94‑1 (MQ=60)
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTA < SRR4302545.3779348/94‑1 (MQ=60)
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTA < SRR4302545.5405918/94‑1 (MQ=60)
GATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCT > SRR4302545.7952615/1‑94 (MQ=60)
GATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACT > SRR4302545.8189848/1‑94 (MQ=60)
ATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTC > SRR4302545.1830127/1‑94 (MQ=60)
TAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCTCGGGCGTTGCCTGCATTTGTTCGACTTTACTCA < SRR4302545.9056839/94‑1 (MQ=60)
TAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCA < SRR4302545.2597657/94‑1 (MQ=60)
TAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCA < SRR4302545.4004071/94‑1 (MQ=60)
AAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCAT > SRR4302545.4746950/1‑94 (MQ=60)
AAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCAT < SRR4302545.5677586/94‑1 (MQ=60)
aattaaaaaAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATT < SRR4302545.8044871/85‑1 (MQ=60)
AATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCGGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATT < SRR4302545.2618235/94‑1 (MQ=60)
AATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATT < SRR4302545.7217847/94‑1 (MQ=60)
ATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTA > SRR4302545.9036348/1‑94 (MQ=60)
TTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTAC > SRR4302545.2350109/1‑94 (MQ=60)
TTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACC > SRR4302545.4145965/1‑94 (MQ=60)
TTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACC < SRR4302545.4689303/94‑1 (MQ=60)
CATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTCCCGG > SRR4302545.2157456/1‑94 (MQ=60)
TCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCA > SRR4302545.4415338/1‑94 (MQ=60)
CAAATCCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCAT < SRR4302545.9736046/94‑1 (MQ=60)
CAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCAT < SRR4302545.6291080/94‑1 (MQ=60)
CAAAACCGGTTTTGAGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCAT > SRR4302545.5458680/1‑94 (MQ=60)
AAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATT < SRR4302545.3802195/94‑1 (MQ=60)
AACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTC > SRR4302545.7064559/1‑94 (MQ=60)
ACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTAGCCACGCGCGGGCGTTGCCTGCATTTGTTTGACTTTGCTCATTAACGGCATTTCT > SRR4302545.3547713/1‑94 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTT < SRR4302545.4005593/94‑1 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT > SRR4302545.10718278/1‑94 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT > SRR4302545.6716788/1‑94 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT < SRR4302545.3727764/94‑1 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT > SRR4302545.6716789/1‑94 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT < SRR4302545.3727762/94‑1 (MQ=60)
CCGGTTTTGCGCGCTTCAATCGCCAGATTATCCGGCTCGCCACGCGCGCGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT > SRR4302545.7553698/1‑94 (MQ=60)
ACGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTT < SRR4302545.1476801/94‑1 (MQ=60)
CGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTG < SRR4302545.3346985/94‑1 (MQ=60)
CGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTG < SRR4302545.5745127/94‑1 (MQ=60)
CGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTG < SRR4302545.7348015/94‑1 (MQ=60)
CGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTG < SRR4302545.5429836/94‑1 (MQ=60)
GTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCG < SRR4302545.755542/94‑1 (MQ=60)
GTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCG > SRR4302545.8650031/1‑94 (MQ=60)
TTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCG < SRR4302545.2578344/94‑1 (MQ=60)
TTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCG < SRR4302545.3794962/94‑1 (MQ=60)
TGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGC < SRR4302545.10388000/94‑1 (MQ=60)
CGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGG < SRR4302545.2127557/94‑1 (MQ=60)
CGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGG > SRR4302545.4059309/1‑94 (MQ=60)
CGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGG > SRR4302545.4237583/1‑94 (MQ=60)
CGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGG < SRR4302545.8838094/94‑1 (MQ=60)
GCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGT > SRR4302545.3156456/1‑94 (MQ=60)
CGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTA < SRR4302545.6474282/94‑1 (MQ=60)
GCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTAC > SRR4302545.7005254/1‑94 (MQ=60)
GCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTAC > SRR4302545.5813230/1‑94 (MQ=60)
CTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACT < SRR4302545.1902463/94‑1 (MQ=60)
CTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACT > SRR4302545.5354167/1‑94 (MQ=60)
TTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTG < SRR4302545.1686039/94‑1 (MQ=60)
tcacgCGCCAGCTTATCCGGCTCGCCACGCGCGGGCGCTGCCTGAATTTGGTCGACTTTACTCCTTACAGGCATTTCTTCGGCCGCTGTACTGG > SRR4302545.6436498/6‑94 (MQ=44)
TCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGG < SRR4302545.5079268/94‑1 (MQ=60)
TCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGG > SRR4302545.6436191/1‑94 (MQ=60)
CAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGGTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGC > SRR4302545.9556415/1‑94 (MQ=60)
AATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCA < SRR4302545.7862280/94‑1 (MQ=60)
AATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCA < SRR4302545.6764577/94‑1 (MQ=60)
ATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCAT < SRR4302545.1441054/94‑1 (MQ=60)
ATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCAT < SRR4302545.5804553/94‑1 (MQ=60)
ATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCAT < SRR4302545.7522469/94‑1 (MQ=60)
ATCGCCAGTTTATCCGGCTCCCCACGCGCGGGCGTTGCCTGCATTTGTTCGTCTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCAT < SRR4302545.3102969/94‑1 (MQ=60)
ATCGCAAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGACGCGGTACTGGCAT < SRR4302545.9978465/94‑1 (MQ=60)
AGCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGTCTTTGCTCATTACCGGCATTGCTTGCGCCGCGGTACTGGCAT < SRR4302545.1441053/94‑1 (MQ=60)
TCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATG > SRR4302545.3021430/1‑94 (MQ=60)
CGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGC > SRR4302545.6647389/1‑94 (MQ=60)
CGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGC > SRR4302545.5954115/1‑94 (MQ=60)
GCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCC > SRR4302545.2852428/1‑94 (MQ=60)
CAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTCCTGCCATGCCAC < SRR4302545.10812098/94‑1 (MQ=60)
CAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCAC < SRR4302545.10747842/94‑1 (MQ=60)
AGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACG < SRR4302545.8935624/94‑1 (MQ=60)
AGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACG < SRR4302545.6880848/94‑1 (MQ=60)
TTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGT > SRR4302545.724641/1‑94 (MQ=60)
TTATGCCGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTT < SRR4302545.6803126/94‑1 (MQ=60)
TTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTT > SRR4302545.7988167/1‑94 (MQ=60)
TTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTT > SRR4302545.9169738/1‑94 (MQ=60)
TTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTT < SRR4302545.5010816/94‑1 (MQ=60)
TATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTG < SRR4302545.2103598/94‑1 (MQ=60)
TATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTG > SRR4302545.7680179/1‑94 (MQ=60)
TATCCGGCTCGCCACGCGCGGGCGTTGCCTGAATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTG < SRR4302545.2168347/94‑1 (MQ=60)
TCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGAT > SRR4302545.277301/1‑94 (MQ=60)
CCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCTTTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATG < SRR4302545.962821/94‑1 (MQ=60)
CGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTTGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGGCACGGTTGATGT > SRR4302545.10617482/1‑94 (MQ=60)
CGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGT > SRR4302545.2077681/1‑94 (MQ=60)
CGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGT < SRR4302545.5940775/94‑1 (MQ=60)
GGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTT < SRR4302545.1902381/94‑1 (MQ=60)
GGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCACGCCACGGTTGATGTT < SRR4302545.1902379/94‑1 (MQ=60)
GGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTT < SRR4302545.1869221/94‑1 (MQ=60)
GGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTATGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTA < SRR4302545.9650681/94‑1 (MQ=60)
GCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTC < SRR4302545.8144829/94‑1 (MQ=60)
GCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCT < SRR4302545.4087839/94‑1 (MQ=60)
CGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGCTGATGTTCCTG > SRR4302545.1178885/1‑94 (MQ=60)
CGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGACATGCCACGGTTGATGTTCCTG < SRR4302545.7592071/94‑1 (MQ=60)
GCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGA > SRR4302545.9897298/1‑94 (MQ=60)
GCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGA < SRR4302545.3361707/94‑1 (MQ=60)
GCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGA > SRR4302545.10264593/1‑94 (MQ=60)
CCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGAC < SRR4302545.1929457/94‑1 (MQ=60)
CCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGAC > SRR4302545.4482205/1‑94 (MQ=60)
CCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGAC > SRR4302545.2431485/1‑94 (MQ=60)
CACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACG < SRR4302545.5575945/94‑1 (MQ=60)
CACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACG > SRR4302545.255680/1‑94 (MQ=60)
ACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGC > SRR4302545.9260423/1‑94 (MQ=60)
ACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGC > SRR4302545.10070801/1‑94 (MQ=60)
ACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGC > SRR4302545.4099358/1‑94 (MQ=60)
CGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTTCTGACGCG > SRR4302545.5954879/1‑94 (MQ=60)
CGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCG > SRR4302545.1327982/1‑94 (MQ=60)
CGCGCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCG < SRR4302545.3641231/94‑1 (MQ=60)
CGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCCTTTCTTGCGCCGCGGTACTGGCATGCTACGGTTGATGTTACTGACGCG > SRR4302545.10293337/1‑94 (MQ=60)
CGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCG < SRR4302545.3513609/94‑1 (MQ=60)
GCGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGG < SRR4302545.10023322/94‑1 (MQ=60)
TGGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGT > SRR4302545.213493/1‑94 (MQ=60)
CGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGT < SRR4302545.9270592/94‑1 (MQ=60)
CGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGT < SRR4302545.9270591/94‑1 (MQ=60)
GGGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTG > SRR4302545.4642562/1‑94 (MQ=60)
GGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTG < SRR4302545.8784125/94‑1 (MQ=60)
GGCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGC < SRR4302545.9960450/94‑1 (MQ=60)
GGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGC > SRR4302545.3132144/1‑94 (MQ=60)
GGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGC > SRR4302545.5411249/1‑94 (MQ=60)
GGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGC > SRR4302545.5411248/1‑94 (MQ=60)
GCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCG < SRR4302545.745869/94‑1 (MQ=60)
GCGTTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCG < SRR4302545.10922650/94‑1 (MQ=60)
CGTTGCCCGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGC < SRR4302545.2896767/94‑1 (MQ=60)
TTGCCTTCTTTTGTTCGACTTTGCTCATTCCCGGCTTTTC‑TGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAG < SRR4302545.3200031/94‑1 (MQ=60)
TTGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAA > SRR4302545.3029588/1‑94 (MQ=60)
TGCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAG < SRR4302545.3219362/94‑1 (MQ=60)
GCCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGC > SRR4302545.3827688/1‑94 (MQ=60)
CCTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCG < SRR4302545.6971554/94‑1 (MQ=60)
CCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCG < SRR4302545.7188256/94‑1 (MQ=60)
CTTCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGG < SRR4302545.2604622/94‑1 (MQ=60)
CTGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGG < SRR4302545.529920/94‑1 (MQ=60)
CTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGG < SRR4302545.2175087/94‑1 (MQ=60)
CTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGG > SRR4302545.131093/1‑94 (MQ=60)
TGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGC > SRR4302545.4802489/1‑94 (MQ=60)
TGCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGC < SRR4302545.7291475/94‑1 (MQ=60)
GCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCG < SRR4302545.1154676/94‑1 (MQ=60)
GCATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCG < SRR4302545.2003352/94‑1 (MQ=60)
GCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCG < SRR4302545.9430236/94‑1 (MQ=60)
CATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGG > SRR4302545.5508398/1‑94 (MQ=60)
CATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGG > SRR4302545.6963383/1‑94 (MQ=60)
ATTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGG < SRR4302545.10849928/94‑1 (MQ=60)
ATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGG > SRR4302545.6739152/1‑94 (MQ=60)
TTTGTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGA > SRR4302545.4873829/1‑94 (MQ=60)
TTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGA < SRR4302545.3565633/94‑1 (MQ=60)
GTTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTT > SRR4302545.6122318/1‑94 (MQ=60)
GTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTT < SRR4302545.9452972/94‑1 (MQ=60)
TTCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTC < SRR4302545.8246363/94‑1 (MQ=60)
TTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTC > SRR4302545.1838680/1‑94 (MQ=60)
TCGCCTTTCCTCAGTCCCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTCCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCG < SRR4302545.34648/94‑1 (MQ=60)
TCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCG < SRR4302545.5349373/94‑1 (MQ=60)
TCGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCG < SRR4302545.8127338/94‑1 (MQ=60)
CGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGC > SRR4302545.9742705/1‑94 (MQ=60)
CGACTTTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGGTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATGTCGC > SRR4302545.9742707/1‑94 (MQ=60)
GACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGTGGCGCAAGCGGCGGGATTTCGCC > SRR4302545.10929462/1‑94 (MQ=60)
GACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCC > SRR4302545.1935418/1‑94 (MQ=60)
GACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCC > SRR4302545.1935419/1‑94 (MQ=60)
ACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACGGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCA < SRR4302545.4032679/94‑1 (MQ=60)
TTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCCTGC > SRR4302545.10675861/1‑94 (MQ=60)
TTGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGC < SRR4302545.10140141/94‑1 (MQ=60)
TTACTCATTACCGGCATTTCGTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGC < SRR4302545.9406309/94‑1 (MQ=60)
TGCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCC > SRR4302545.6844190/1‑94 (MQ=60)
GCTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG < SRR4302545.7338686/94‑1 (MQ=60)
ACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG < SRR4302545.7603876/94‑1 (MQ=60)
ACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG > SRR4302545.2248569/1‑94 (MQ=60)
ACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG > SRR4302545.1462490/1‑94 (MQ=60)
ACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCAACGATGATGTTCCCGACGCGCGGTGCGCAAGCGGCGGGcaatagccatgccg > SRR4302545.436736/1‑80 (MQ=60)
|
CAGATAAATTTCATCAAAACCGGTTTTGCGCGCTTCAATCGCCAGTTTATCCGGCTCGCCACGCGCGGGCGTTGCCTGCATTTGTTCGACTTTACTCATTACCGGCATTTCTTGCGCCGCGGTACTGGCATGCCACGGTTGATGTTCCTGACGCGCGGTGCGCAAGCGGCGGGATTTCGCCATGCCG > NC_000913/2582907‑2583093
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
