Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,664,389 T→C V319A (GTC→GCC)  csiE → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,664,3890TC99.1% 1117.5 / ‑2.2 334V319A (GTC→GCC) csiEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base C (134/197);  total (135/199)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01

Only 100 of 349 total aligned reads displayed.

AATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT  >  NC_000913/2664298‑2664479
                                                                                           |                                                                                          
 ataCCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCa                                                                                         >  2:2562044/1‑94 (MQ=255)
    cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCt                                                                                      >  2:3481770/1‑94 (MQ=255)
    cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGGGAATAGGGGGCCCATCt                                                                                      >  1:1380594/1‑94 (MQ=255)
         ccGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtg                                                                                 >  1:5843892/1‑94 (MQ=255)
         ccGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtg                                                                                 >  1:1126277/1‑94 (MQ=255)
         ccGAAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtg                                                                                 <  2:1215999/94‑1 (MQ=255)
           ggAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtgat                                                                               >  2:10070930/1‑94 (MQ=255)
             aaGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtgatga                                                                             <  1:4039103/94‑1 (MQ=255)
               gagTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAgg                                                                           >  2:773190/1‑94 (MQ=255)
               aatttCCCCAGCCTGTACCCACGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAgg                                                                           <  1:2167869/91‑1 (MQ=255)
                agTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGa                                                                          <  1:1914758/94‑1 (MQ=255)
                  ttCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGaaa                                                                        <  2:6401749/94‑1 (MQ=255)
                  ttCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGaaa                                                                        <  2:8711739/94‑1 (MQ=255)
                    cGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGt                                                                      >  1:2504121/1‑94 (MQ=255)
                     gCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg                                                                     >  1:5726659/1‑94 (MQ=255)
                     gCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg                                                                     <  1:3214948/94‑1 (MQ=255)
                     gCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg                                                                     <  2:3246195/94‑1 (MQ=255)
                     cccAGACTGTCCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg                                                                     <  1:3985294/93‑1 (MQ=255)
                      ccAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCGGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtgg                                                                    >  1:7898075/1‑94 (MQ=255)
                      ccAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtgg                                                                    <  1:5500695/94‑1 (MQ=255)
                       cAGTCTTTACCCACGCCTGGTGCGCACCAGCCGCGCGCCGCTGGCCGGATTTGAAGGTGAATACGCCGCCCATCTTTCTGGTTAGGAAAGgggt                                                                   >  1:8105632/1‑94 (MQ=255)
                       cAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggt                                                                   >  2:4513598/1‑94 (MQ=255)
                       cAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggt                                                                   >  1:1703777/1‑94 (MQ=255)
                       cAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggt                                                                   <  2:7881537/94‑1 (MQ=255)
                            tGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtctggt                                                              <  2:3606726/94‑1 (MQ=255)
                              tACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTcg                                                            >  2:10262633/1‑94 (MQ=255)
                               aCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTcgc                                                           <  2:7490837/94‑1 (MQ=255)
                               aCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTcgc                                                           <  1:9919316/94‑1 (MQ=255)
                               aCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTcgc                                                           >  1:640793/1‑94 (MQ=255)
                                cccACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTcgcg                                                          <  2:6095194/94‑1 (MQ=255)
                                  cACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGt                                                        <  1:7111765/94‑1 (MQ=255)
                                      ccTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAtt                                                    <  1:9255418/94‑1 (MQ=255)
                                       cTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAttt                                                   <  1:5999521/94‑1 (MQ=255)
                                       cTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAttt                                                   >  2:9144418/1‑94 (MQ=255)
                                        tGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAtttt                                                  >  1:10135349/1‑94 (MQ=255)
                                         ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTc                                                 <  2:1613937/94‑1 (MQ=255)
                                         ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTc                                                 <  2:1986810/94‑1 (MQ=255)
                                         ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTc                                                 <  1:5112399/94‑1 (MQ=255)
                                         ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTc                                                 <  2:648392/94‑1 (MQ=255)
                                          gTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCg                                                >  2:2160592/1‑94 (MQ=255)
                                           tGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCgg                                               <  1:1176848/94‑1 (MQ=255)
                                           tGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCgg                                               <  2:8111753/94‑1 (MQ=255)
                                            gcgcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGt                                              <  1:2882724/94‑1 (MQ=255)
                                            gcgcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGt                                              <  1:4584110/94‑1 (MQ=255)
                                             cgcACCCCCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTg                                             <  2:294090/94‑1 (MQ=255)
                                             cgcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTg                                             >  2:10337634/1‑94 (MQ=255)
                                              gcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGc                                            >  1:606589/1‑94 (MQ=255)
                                                accaccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCt                                          >  2:9546642/1‑94 (MQ=255)
                                                 ccaccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTg                                         <  2:9817210/94‑1 (MQ=255)
                                                  caccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTgg                                        <  1:385356/94‑1 (MQ=255)
                                                    cccGCGCGTCGCTGGCCGGATTTGAAAGTCAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCt                                      <  1:4352371/94‑1 (MQ=255)
                                                    cccGCGCGGCGCTGGGCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCt                                      <  2:2705955/94‑1 (MQ=255)
                                                     ccGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTa                                     <  2:7423023/94‑1 (MQ=255)
                                                     ccGCGCGGCGCGGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAAGAGGAAAGCGGTCTGGTCGCGGCGAGGTTCGGTGCCCGGCTa                                     >  1:9342464/1‑94 (MQ=255)
                                                      cgcgcgGCGCTGTCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa                                    <  2:9499729/94‑1 (MQ=255)
                                                      cgcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa                                    >  2:3772559/1‑94 (MQ=255)
                                                      cgcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa                                    <  2:5249123/94‑1 (MQ=255)
                                                      cgcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa                                    <  2:6991614/94‑1 (MQ=255)
                                                      cgcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa                                    <  2:9291921/94‑1 (MQ=255)
                                                       gcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAAt                                   <  1:2255845/94‑1 (MQ=255)
                                                        cgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATg                                  <  2:1513102/94‑1 (MQ=255)
                                                         gcggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGc                                 <  2:7123953/94‑1 (MQ=255)
                                                         gcggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGc                                 <  1:1385120/94‑1 (MQ=255)
                                                          cggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCa                                >  2:9022503/1‑94 (MQ=255)
                                                          cggcgCTGGCCGGATTTGAAAGTGAATACCGCGCCCATCTTTCTGATGAGGAACGTGGTCTGGGCGGAGTGCTTTTCGGAGCCTGGCTCATGct                                >  2:8981666/1‑93 (MQ=255)
                                                           ggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAg                               <  2:7178702/94‑1 (MQ=255)
                                                             cgcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGa                             >  2:616930/1‑94 (MQ=255)
                                                             cgcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGa                             <  2:4057025/94‑1 (MQ=255)
                                                              gcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaa                            >  1:8346690/1‑94 (MQ=255)
                                                                tGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaaaa                          <  2:6818444/94‑1 (MQ=255)
                                                                  gCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACg                        <  1:4826525/94‑1 (MQ=255)
                                                                  gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACg                        >  1:7487626/1‑94 (MQ=255)
                                                                  gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACg                        <  1:6947768/94‑1 (MQ=255)
                                                                  gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGGCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACg                        >  2:4608459/1‑94 (MQ=255)
                                                                   ccGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGa                       >  1:1594545/1‑94 (MQ=255)
                                                                    cGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGAt                      <  1:2731165/94‑1 (MQ=255)
                                                                     ggATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGAtt                     >  2:3115829/1‑93 (MQ=255)
                                                                     ggATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATc                     >  2:134989/1‑94 (MQ=255)
                                                                     ggATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATc                     <  1:9719979/94‑1 (MQ=255)
                                                                       aTTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTg                   <  2:8371886/94‑1 (MQ=255)
                                                                        tttGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGc                  >  2:8759539/1‑94 (MQ=255)
                                                                         ttGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa                 <  1:3517182/94‑1 (MQ=255)
                                                                         ttGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa                 <  2:2430218/94‑1 (MQ=255)
                                                                         ttGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa                 <  2:511612/94‑1 (MQ=255)
                                                                           gAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTTTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATg               <  2:9671385/94‑1 (MQ=255)
                                                                           gAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATg               <  1:6462426/94‑1 (MQ=255)
                                                                           gAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATg               <  1:948527/94‑1 (MQ=255)
                                                                           gAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATg               >  1:10384482/1‑94 (MQ=255)
                                                                            aaaGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGa              >  2:5756312/1‑94 (MQ=255)
                                                                             aaGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaa             <  1:776320/94‑1 (MQ=255)
                                                                              agggAATACGGCGCCCATCGTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaa            <  1:9863302/91‑1 (MQ=255)
                                                                               gTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaaa           <  1:5380037/94‑1 (MQ=255)
                                                                               gTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaaa           <  2:10597920/94‑1 (MQ=255)
                                                                                tGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaaaa          <  1:8885692/94‑1 (MQ=255)
                                                                                 gAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAAc         <  1:7247144/94‑1 (MQ=255)
                                                                                  aaTACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACa        >  1:8564705/1‑94 (MQ=255)
                                                                                  aaTACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACa        <  1:3224889/94‑1 (MQ=255)
                                                                                      cGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatt    >  2:5356563/1‑94 (MQ=255)
                                                                                       ggCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatta   <  2:10492579/94‑1 (MQ=255)
                                                                                        gcgcCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCTGTGATTTTCGGTTCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGattat  <  1:10034759/94‑1 (MQ=255)
                                                                                           |                                                                                          
AATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT  >  NC_000913/2664298‑2664479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATAATACCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  >  NC_000913/2664296‑2664482
                                                                                              |                                                                                             
ATAATACCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGC                                                                                               >  SRR4302545.4648985/1‑94 (MQ=60)
 TAATACCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCC                                                                                              >  SRR4302545.1939938/1‑94 (MQ=60)
    TCCCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCAT                                                                                           <  SRR4302545.2642977/94‑1 (MQ=60)
     ACCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATC                                                                                          <  SRR4302545.3002425/94‑1 (MQ=60)
      CCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT                                                                                         <  SRR4302545.5062968/94‑1 (MQ=60)
      CCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT                                                                                         >  SRR4302545.1411552/1‑94 (MQ=60)
      CCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT                                                                                         <  SRR4302545.2560618/94‑1 (MQ=60)
      CCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT                                                                                         >  SRR4302545.1411553/1‑94 (MQ=60)
      CCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGGGAATAGGGGGCCCATCT                                                                                         >  SRR4302545.1411551/1‑94 (MQ=60)
      CCCGGCCGGAAG‑AGTGCCCCAGACTGTACCCACGCCTGGTGCGCACCTCCCGCGCGGCGCTGGCCTGATTTGAAAGTGAATGCGGCGCCCATCT                                                                                         <  SRR4302545.3866897/94‑1 (MQ=60)
       CCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTT                                                                                        <  SRR4302545.1152655/94‑1 (MQ=60)
       CCTCCCGGAAG‑AGTTCCCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTT                                                                                        <  SRR4302545.3736439/94‑1 (MQ=60)
        CTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTT                                                                                       >  SRR4302545.4657117/1‑94 (MQ=60)
         TGCGGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTC                                                                                      <  SRR4302545.818765/94‑1 (MQ=60)
         TGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACAGCGCCCATCTTTC                                                                                      >  SRR4302545.6116891/1‑94 (MQ=60)
         TGCCGGAAG‑AGTGCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTC                                                                                      <  SRR4302545.159637/94‑1 (MQ=60)
          GCCGTAAA‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCT                                                                                     <  SRR4302545.5997173/94‑1 (MQ=60)
           CCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTG                                                                                    >  SRR4302545.6001252/1‑94 (MQ=60)
           CCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTG                                                                                    >  SRR4302545.1150890/1‑94 (MQ=60)
           CCGGAAA‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTG                                                                                    <  SRR4302545.3971205/94‑1 (MQ=60)
            CGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGA                                                                                   >  SRR4302545.1302929/1‑94 (MQ=60)
            CGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGA                                                                                   >  SRR4302545.8710251/1‑94 (MQ=60)
             GGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAT                                                                                  <  SRR4302545.2016617/94‑1 (MQ=60)
             GGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAT                                                                                  >  SRR4302545.7144868/1‑94 (MQ=60)
              GAAGTAGTGCGCCAGACTGTCCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAT                                                                                  <  SRR4302545.4090298/94‑1 (MQ=60)
              GAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATG                                                                                 <  SRR4302545.2221564/94‑1 (MQ=60)
              GAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGAATTGAAAGTGAAAACGGCGCCCATCTTTCTGATG                                                                                 >  SRR4302545.9751540/1‑94 (MQ=60)
               AAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGA                                                                                <  SRR4302545.4140241/94‑1 (MQ=60)
               AAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGA                                                                                >  SRR4302545.2930163/1‑94 (MQ=60)
                AG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAG                                                                               >  SRR4302545.544918/1‑94 (MQ=60)
                 G‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGG                                                                              >  SRR4302545.2661966/1‑94 (MQ=60)
                  aatttccccagcCTGTACCCACGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGG                                                                              <  SRR4302545.2220884/82‑1 (MQ=60)
                   AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGA                                                                             <  SRR4302545.1962085/94‑1 (MQ=60)
                   AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGA                                                                             <  SRR4302545.8746324/94‑1 (MQ=60)
                   AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGA                                                                             >  SRR4302545.1017616/1‑94 (MQ=60)
                    GTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAA                                                                            >  SRR4302545.4273639/1‑94 (MQ=60)
                    GTCCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAA                                                                            <  SRR4302545.879894/94‑1 (MQ=60)
                      TCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAG                                                                          >  SRR4302545.1251881/1‑94 (MQ=60)
                      TCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAG                                                                          >  SRR4302545.4880602/1‑94 (MQ=60)
                       CGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGT                                                                         >  SRR4302545.2564658/1‑94 (MQ=60)
                       CGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGG                                                                         >  SRR4302545.911699/1‑94 (MQ=60)
                        GCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        >  SRR4302545.5880308/1‑94 (MQ=60)
                        GCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        <  SRR4302545.3293754/94‑1 (MQ=60)
                        GCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        >  SRR4302545.9383299/1‑94 (MQ=60)
                        CCCAGACTGTCCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        <  SRR4302545.8063206/94‑1 (MQ=60)
                        CCCAGACTGTCCCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        <  SRR4302545.4084991/94‑1 (MQ=60)
                        CCCAGACTGTACCCACGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG                                                                        <  SRR4302545.4084992/94‑1 (MQ=60)
                         CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCGGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG                                                                       >  SRR4302545.8122229/1‑94 (MQ=60)
                         CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG                                                                       <  SRR4302545.1042762/94‑1 (MQ=60)
                         CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG                                                                       <  SRR4302545.5645600/94‑1 (MQ=60)
                         CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG                                                                       <  SRR4302545.8660706/94‑1 (MQ=60)
                          CAGTCTTTACCCACGCCTGGTGCGCACCAGCCGCGCGCCGCTGGCCGGATTTGAAGGTGAATACGCCGCCCATCTTTCTGGTTAGGAAAGGGGT                                                                      >  SRR4302545.8339398/1‑94 (MQ=50)
                          CAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGT                                                                      >  SRR4302545.1744308/1‑94 (MQ=60)
                           AGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTC                                                                     <  SRR4302545.3531865/94‑1 (MQ=60)
                             ACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTG                                                                   <  SRR4302545.8548608/94‑1 (MQ=60)
                              CTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGG                                                                  <  SRR4302545.65772/94‑1 (MQ=60)
                              CTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGG                                                                  <  SRR4302545.28923/94‑1 (MQ=60)
                               TGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGT                                                                 >  SRR4302545.8065221/1‑94 (MQ=60)
                               TGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGT                                                                 >  SRR4302545.4095444/1‑94 (MQ=60)
                                 TACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCG                                                               <  SRR4302545.2224113/94‑1 (MQ=60)
                                 TACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCG                                                               <  SRR4302545.10704606/94‑1 (MQ=60)
                                  ACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGC                                                              <  SRR4302545.6152938/94‑1 (MQ=60)
                                  ACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGC                                                              <  SRR4302545.10213951/94‑1 (MQ=60)
                                  ACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGC                                                              >  SRR4302545.655117/1‑94 (MQ=60)
                                     CACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGT                                                           <  SRR4302545.7308806/94‑1 (MQ=60)
                                      CCGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTG                                                          <  SRR4302545.9954246/94‑1 (MQ=60)
                                      ACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTG                                                          >  SRR4302545.6595641/1‑94 (MQ=60)
                                      ACGCCTGGAGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTG                                                          >  SRR4302545.1872144/1‑94 (MQ=60)
                                       CGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGA                                                         <  SRR4302545.3929720/94‑1 (MQ=60)
                                       CGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGA                                                         >  SRR4302545.10914159/1‑94 (MQ=60)
                                       CGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGA                                                         >  SRR4302545.3238933/1‑94 (MQ=60)
                                        GCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAT                                                        >  SRR4302545.10686164/1‑94 (MQ=60)
                                        GCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAT                                                        <  SRR4302545.2763721/94‑1 (MQ=60)
                                         CCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATT                                                       <  SRR4302545.9526767/94‑1 (MQ=60)
                                          CTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTT                                                      <  SRR4302545.6161467/94‑1 (MQ=60)
                                          CTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTT                                                      <  SRR4302545.7432608/94‑1 (MQ=60)
                                          CTGGGGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTT                                                      <  SRR4302545.6161464/94‑1 (MQ=60)
                                           TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT                                                     >  SRR4302545.1314735/1‑94 (MQ=60)
                                           TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT                                                     >  SRR4302545.1799683/1‑94 (MQ=60)
                                           TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT                                                     >  SRR4302545.3301502/1‑94 (MQ=60)
                                           TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT                                                     >  SRR4302545.1482168/1‑94 (MQ=60)
                                           TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT                                                     >  SRR4302545.10435079/1‑94 (MQ=60)
                                            GGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTC                                                    <  SRR4302545.5243288/94‑1 (MQ=60)
                                             GTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCG                                                   <  SRR4302545.5126485/94‑1 (MQ=60)
                                             GTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCG                                                   >  SRR4302545.10284904/1‑94 (MQ=60)
                                             GTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCG                                                   >  SRR4302545.6229344/1‑94 (MQ=60)
                                             GTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCG                                                   <  SRR4302545.981095/94‑1 (MQ=60)
                                              TGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGG                                                  <  SRR4302545.1202958/94‑1 (MQ=60)
                                              TGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGG                                                  <  SRR4302545.4047856/94‑1 (MQ=60)
                                               GCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGACTACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGGCGCGGTGATTTTCGGT                                                 <  SRR4302545.10308005/94‑1 (MQ=60)
                                               GCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGT                                                 <  SRR4302545.4701549/94‑1 (MQ=60)
                                               GCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGT                                                 <  SRR4302545.2952509/94‑1 (MQ=60)
                                                CGCACCCCCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGGGCCCATCTTTCTGATGAGGAAAGTGGGCTGGTCGCGGGGGTTTTTGGTG                                                >  SRR4302545.7799328/1‑94 (MQ=60)
                                                CGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTG                                                <  SRR4302545.4797174/94‑1 (MQ=60)
                                                 GCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGC                                               >  SRR4302545.620235/1‑94 (MQ=60)
                                                   ccccCCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCT                                             <  SRR4302545.7117786/90‑1 (MQ=60)
                                                   CCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCT                                             <  SRR4302545.6678039/94‑1 (MQ=60)
                                                   ACCGCCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCT                                             <  SRR4302545.7206320/94‑1 (MQ=60)
                                                    CCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACTGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTG                                            <  SRR4302545.101469/94‑1 (MQ=60)
                                                    CCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTG                                            >  SRR4302545.8178997/1‑94 (MQ=60)
                                                     CACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGG                                           <  SRR4302545.4200351/94‑1 (MQ=60)
                                                     CACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGG                                           <  SRR4302545.393934/94‑1 (MQ=60)
                                                     CACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGG                                           <  SRR4302545.10032875/94‑1 (MQ=60)
                                                      ACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGC                                          >  SRR4302545.7061793/1‑94 (MQ=60)
                                                       CCCGCGCGTCGCTGGCCGGATTTGAAAGTCAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCT                                         <  SRR4302545.4462332/94‑1 (MQ=60)
                                                       CCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCT                                         <  SRR4302545.7452976/94‑1 (MQ=60)
                                                        CCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTA                                        >  SRR4302545.9543584/1‑94 (MQ=60)
                                                        CCGCGCGGCGCGGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAAGAGGAAAGCGGTCTGGTCGCGGCGAGGTTCGGTGCCCGGCTA                                        >  SRR4302545.9616412/1‑94 (MQ=60)
                                                         CGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAA                                       >  SRR4302545.1189786/1‑94 (MQ=60)
                                                         CGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAA                                       <  SRR4302545.10715680/94‑1 (MQ=60)
                                                         CGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGATAA                                       <  SRR4302545.9666256/94‑1 (MQ=60)
                                                          GCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAAT                                      <  SRR4302545.1642657/94‑1 (MQ=60)
                                                          GCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAAT                                      <  SRR4302545.2310772/94‑1 (MQ=60)
                                                           CGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATG                                     <  SRR4302545.9597626/94‑1 (MQ=60)
                                                            GCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGC                                    <  SRR4302545.1416215/94‑1 (MQ=60)
                                                             CGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCA                                   <  SRR4302545.8896523/94‑1 (MQ=60)
                                                              GGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAG                                  <  SRR4302545.5899463/94‑1 (MQ=60)
                                                              GGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAG                                  <  SRR4302545.7375955/94‑1 (MQ=60)
                                                               GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG                                 <  SRR4302545.7902519/94‑1 (MQ=60)
                                                               GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG                                 <  SRR4302545.5713520/94‑1 (MQ=60)
                                                               GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG                                 <  SRR4302545.7858188/94‑1 (MQ=60)
                                                               GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG                                 <  SRR4302545.1460670/94‑1 (MQ=60)
                                                                CGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGA                                >  SRR4302545.2298456/1‑94 (MQ=60)
                                                                 GCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAA                               >  SRR4302545.8588493/1‑94 (MQ=60)
                                                                  CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA                              <  SRR4302545.4046086/94‑1 (MQ=60)
                                                                  CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA                              <  SRR4302545.10340660/94‑1 (MQ=60)
                                                                  CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA                              <  SRR4302545.6326569/94‑1 (MQ=60)
                                                                  CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA                              <  SRR4302545.10340661/94‑1 (MQ=60)
                                                                   TGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAA                             >  SRR4302545.8429953/1‑94 (MQ=60)
                                                                    GGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAC                            >  SRR4302545.4539843/1‑94 (MQ=60)
                                                                     GCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACG                           <  SRR4302545.4949716/94‑1 (MQ=60)
                                                                     GCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACG                           <  SRR4302545.7139310/94‑1 (MQ=60)
                                                                     GCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACG                           >  SRR4302545.7699542/1‑94 (MQ=60)
                                                                      CCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGA                          <  SRR4302545.6533139/94‑1 (MQ=60)
                                                                      CCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGA                          >  SRR4302545.1632292/1‑94 (MQ=60)
                                                                       CGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGAT                         <  SRR4302545.7508172/94‑1 (MQ=60)
                                                                       CGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGAT                         <  SRR4302545.2797030/94‑1 (MQ=60)
                                                                        GGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATC                        >  SRR4302545.10018348/1‑94 (MQ=60)
                                                                        GGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATC                        <  SRR4302545.10009492/94‑1 (MQ=60)
                                                                        GGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATC                        <  SRR4302545.1695192/94‑1 (MQ=60)
                                                                           TTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGC                     <  SRR4302545.5792180/94‑1 (MQ=60)
                                                                            TTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCA                    <  SRR4302545.3603440/94‑1 (MQ=60)
                                                                            TTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGAA                    <  SRR4302545.1857196/94‑1 (MQ=60)
                                                                            TTAAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGAGGTCTGGTCGCGGTGATTTTCGGTGAATGACTAATGCAGGAAAACGATCTGCA                    <  SRR4302545.9697239/94‑1 (MQ=60)
                                                                             TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT                   >  SRR4302545.2349151/1‑94 (MQ=60)
                                                                             TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT                   >  SRR4302545.3455872/1‑94 (MQ=60)
                                                                             TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT                   >  SRR4302545.551898/1‑94 (MQ=60)
                                                                             TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT                   >  SRR4302545.4865431/1‑94 (MQ=60)
                                                                              GAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGACAACCATCTGCATG                  >  SRR4302545.7841627/1‑94 (MQ=60)
                                                                              GAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATG                  <  SRR4302545.6639122/94‑1 (MQ=60)
                                                                              GAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATG                  <  SRR4302545.969816/94‑1 (MQ=60)
                                                                              GAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATG                  >  SRR4302545.10690635/1‑94 (MQ=60)
                                                                                AAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAA                <  SRR4302545.793778/94‑1 (MQ=60)
                                                                                AAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAA                <  SRR4302545.5528581/94‑1 (MQ=60)
                                                                                AAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCCAATGCAGGAAAACGATCTGCATGAA                <  SRR4302545.5362592/94‑1 (MQ=60)
                                                                                 TGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAA               >  SRR4302545.6388912/1‑94 (MQ=60)
                                                                                 AGTGAATAGGGCGTTAATCTTTCTGATGAGGAAAGTGGTGTGGTCGCGGTGATTTTCGGTGCGTGGCTAATGCAGGAAAACGATGTGCATGAAA               <  SRR4302545.10156430/94‑1 (MQ=60)
                                                                                 AGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAA               >  SRR4302545.3536686/1‑94 (MQ=60)
                                                                                 AGGGAATACGGCGCCCATCGTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAA               <  SRR4302545.10156431/94‑1 (MQ=60)
                                                                                  GTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAA              >  SRR4302545.5465108/1‑94 (MQ=60)
                                                                                  GTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAA              <  SRR4302545.5520021/94‑1 (MQ=60)
                                                                                   TGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAA             <  SRR4302545.329271/94‑1 (MQ=60)
                                                                                   TGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAA             <  SRR4302545.9143913/94‑1 (MQ=60)
                                                                                    GAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAAC            <  SRR4302545.7449737/94‑1 (MQ=60)
                                                                                    GAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAAC            <  SRR4302545.7450024/94‑1 (MQ=60)
                                                                                     AATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACA           >  SRR4302545.8812359/1‑94 (MQ=60)
                                                                                     AATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACA           <  SRR4302545.3304039/94‑1 (MQ=60)
                                                                                     AATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACA           <  SRR4302545.6223207/94‑1 (MQ=60)
                                                                                      ATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAG          <  SRR4302545.922998/94‑1 (MQ=60)
                                                                                       TACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGA         <  SRR4302545.10211305/94‑1 (MQ=60)
                                                                                        ACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGAT        >  SRR4302545.8179225/1‑94 (MQ=60)
                                                                                         CGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATT       <  SRR4302545.3241762/94‑1 (MQ=60)
                                                                                          GGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA      <  SRR4302545.4239734/94‑1 (MQ=60)
                                                                                          GGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA      >  SRR4302545.5787263/1‑94 (MQ=60)
                                                                                           GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCTGTGATTTTCGGTTCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT     <  SRR4302545.10332021/94‑1 (MQ=60)
                                                                                           GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT     <  SRR4302545.2069031/94‑1 (MQ=60)
                                                                                           GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT     >  SRR4302545.10291894/1‑94 (MQ=60)
                                                                                             GCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC   <  SRR4302545.9969886/94‑1 (MQ=60)
                                                                                             GCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC   <  SRR4302545.6349371/94‑1 (MQ=60)
                                                                                             GCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC   >  SRR4302545.9385971/1‑94 (MQ=60)
                                                                                              CCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  <  SRR4302545.7527546/94‑1 (MQ=60)
                                                                                              CCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  <  SRR4302545.3279679/94‑1 (MQ=60)
                                                                                              CCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  <  SRR4302545.8807597/94‑1 (MQ=60)
                                                                                              CCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  <  SRR4302545.2850244/94‑1 (MQ=60)
                                                                                              |                                                                                             
ATAATACCCTGCCGGAAG‑AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCT  >  NC_000913/2664296‑2664482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑