Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,664,389 |
T→C |
V319A (GTC→GCC) |
csiE → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,664,389 | 0 | T | C | 100.0%
| 726.5
/ NA
| 216 | V319A (GTC→GCC) | csiE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/126); total (90/126) |
Only 100 of 226 total aligned reads displayed.
ATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA > NC_000913/2664299‑2664478
|
taCCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCa > 1:6105056/1‑93 (MQ=255)
cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATc < 1:5771416/93‑1 (MQ=255)
cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATc < 2:3129347/93‑1 (MQ=255)
cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATc < 2:4707665/93‑1 (MQ=255)
cccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATc < 1:1734477/93‑1 (MQ=255)
ccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCt < 2:4695395/93‑1 (MQ=255)
ccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCt < 2:5593795/93‑1 (MQ=255)
ccTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCt > 1:4458967/1‑93 (MQ=255)
cTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGGAAGTGAATACGGCGCCCATCtt > 2:3475067/1‑93 (MQ=255)
cTGCCGGAAGAGTCCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCtt < 2:6247205/93‑1 (MQ=255)
tccGGAAGAGTTCCCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTc < 2:6157797/92‑1 (MQ=255)
ccGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCt < 2:4458019/93‑1 (MQ=255)
ggAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtga < 2:1542990/93‑1 (MQ=255)
ggAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtga > 2:1934740/1‑93 (MQ=255)
ggAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtga > 2:3030063/1‑93 (MQ=255)
ccaaGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtga < 2:2188150/91‑1 (MQ=255)
gAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtgat > 1:1186522/1‑93 (MQ=255)
aaGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtgatg > 1:1354706/1‑93 (MQ=255)
agagTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCtgatga < 1:3031393/93‑1 (MQ=255)
gagTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAg < 1:5427036/93‑1 (MQ=255)
gagTTCCCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAg < 1:1071336/93‑1 (MQ=255)
gagTCCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAg < 2:6223794/93‑1 (MQ=255)
gTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGa < 1:467590/93‑1 (MQ=255)
cGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAg > 2:122327/1‑93 (MQ=255)
gCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGt > 2:3850856/1‑93 (MQ=255)
cccAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTAAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGt < 2:2832974/92‑1 (MQ=255)
ccAGACTGTACCCACGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg < 1:173309/93‑1 (MQ=255)
ccAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg > 1:184191/1‑93 (MQ=255)
ccAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtg < 1:4111540/93‑1 (MQ=255)
aGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggt < 2:3542678/93‑1 (MQ=255)
aGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggt < 2:2691234/93‑1 (MQ=255)
gACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtc > 2:1843424/1‑93 (MQ=255)
gACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtc < 2:4593147/93‑1 (MQ=255)
gACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtc > 1:6268783/1‑93 (MQ=255)
gACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtc < 1:1481079/93‑1 (MQ=255)
aCTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtct < 2:5193689/93‑1 (MQ=255)
tGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtctgg > 2:509192/1‑93 (MQ=255)
tGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGtggtctgg < 2:1370473/93‑1 (MQ=255)
gTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAACTGAATACGGCGCCCATCGTTCTGATGAGGAAAGtagtctggc > 1:3264886/1‑92 (MQ=255)
cACGCCTGGTGCGCACCACCCGCGCGGCGCTGGGCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCgg < 1:2124029/93‑1 (MQ=255)
aCGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGt < 2:2140953/93‑1 (MQ=255)
ccTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAt < 2:882831/93‑1 (MQ=255)
cTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAtt > 2:1674683/1‑93 (MQ=255)
tGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAttt < 1:1001717/93‑1 (MQ=255)
tGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAttt < 1:4759514/93‑1 (MQ=255)
ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAtttt > 1:6402418/1‑93 (MQ=255)
ggTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGAtttt > 1:4630108/1‑93 (MQ=255)
tGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCg > 2:5722737/1‑93 (MQ=255)
gcgcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCgg > 2:6303722/1‑93 (MQ=255)
gcACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTg > 1:2450541/1‑93 (MQ=255)
accgccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGcc < 2:4130439/93‑1 (MQ=255)
accaccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGcc < 1:1534202/93‑1 (MQ=255)
accaccCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGcc > 2:133425/1‑93 (MQ=255)
ccccGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTgg < 2:326499/92‑1 (MQ=255)
cccGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGc < 2:356621/93‑1 (MQ=255)
cgcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCGTGGCTa > 1:115217/1‑93 (MQ=255)
gcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa > 2:2530400/1‑93 (MQ=255)
gcgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTaa > 1:3008147/1‑93 (MQ=255)
cgcgGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAAt < 2:2939013/93‑1 (MQ=255)
gcggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATg > 1:5207320/1‑93 (MQ=255)
gcggcgCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATg > 2:2783694/1‑93 (MQ=255)
gcgcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAg > 2:491721/1‑93 (MQ=255)
gcgcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAg < 1:2855981/93‑1 (MQ=255)
cgcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAgg < 2:3620597/93‑1 (MQ=255)
gcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGa > 2:6027056/1‑93 (MQ=255)
gcTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGa < 1:2328961/93‑1 (MQ=255)
cTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaa < 1:2705390/93‑1 (MQ=255)
tGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaaa > 2:1462548/1‑93 (MQ=255)
tGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaaa > 2:4841614/1‑93 (MQ=255)
ggCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaaaa < 1:5574296/93‑1 (MQ=255)
ggCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGaaaa < 1:6358569/93‑1 (MQ=255)
gCCGGATTTTAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAc < 1:4261719/93‑1 (MQ=255)
gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAc < 1:3017354/93‑1 (MQ=255)
gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAc > 2:1178457/1‑93 (MQ=255)
gCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAc > 1:3781349/1‑93 (MQ=255)
cGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGa > 2:5696055/1‑93 (MQ=255)
cGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGa > 2:756310/1‑93 (MQ=255)
gATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATc < 1:675049/93‑1 (MQ=255)
gATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATc < 1:40012/93‑1 (MQ=255)
aTTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCt < 2:5974303/93‑1 (MQ=255)
aTTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCt > 2:5318597/1‑93 (MQ=255)
ttGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGc > 1:431254/1‑93 (MQ=255)
tGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa < 1:3493997/93‑1 (MQ=255)
tGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa > 1:1435378/1‑93 (MQ=255)
tGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa < 1:379859/93‑1 (MQ=255)
tGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa < 1:3728683/93‑1 (MQ=255)
tGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCa < 2:4343828/93‑1 (MQ=255)
gAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAt < 1:3641201/93‑1 (MQ=255)
aaGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGa > 2:3897830/1‑93 (MQ=255)
gTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaa > 1:5102175/1‑93 (MQ=255)
gTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaa > 2:4009257/1‑93 (MQ=255)
gAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGaaaaa < 2:3765430/93‑1 (MQ=255)
aaTACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAAc < 2:5069344/93‑1 (MQ=255)
aTACGGCGCCCATCTTTCTGATGAGGAAAGTTGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACa < 1:3221559/93‑1 (MQ=255)
aCGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGa < 2:216040/93‑1 (MQ=255)
cGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGat < 1:5668324/93‑1 (MQ=255)
ggCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatt < 1:5197666/93‑1 (MQ=255)
gcgcCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatta < 1:2634688/93‑1 (MQ=255)
gcgcCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatta < 2:1717796/93‑1 (MQ=255)
gcgcCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGatta < 1:5015572/93‑1 (MQ=255)
|
ATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA > NC_000913/2664299‑2664478
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC > NC_000913/2664296‑2664481
|
ATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGC > SRR4302537.4192349/1‑94 (MQ=60)
ATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGC > SRR4302537.1334991/1‑94 (MQ=60)
actcccgtgcgGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCC < SRR4302537.4784051/83‑1 (MQ=60)
AATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCC > SRR4302537.3183011/1‑94 (MQ=60)
ATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCA > SRR4302537.6147000/1‑94 (MQ=60)
ATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATCTGAAAGTGAACAGGGCGCCCA > SRR4302537.1050751/1‑94 (MQ=60)
CCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT > SRR4302537.4489798/1‑94 (MQ=60)
CCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT < SRR4302537.5810974/94‑1 (MQ=60)
CCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT < SRR4302537.1746574/94‑1 (MQ=60)
CCCTCCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCGCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCT < SRR4302537.1746573/94‑1 (MQ=60)
ctggcaGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTT < SRR4302537.5798441/88‑1 (MQ=60)
CCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTT > SRR4302537.5285667/1‑94 (MQ=60)
GCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCT > SRR4302537.171079/1‑94 (MQ=60)
CCGGAAGAGTGCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTG < SRR4302537.3123887/94‑1 (MQ=60)
GGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGAT > SRR4302537.1194765/1‑94 (MQ=60)
GAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATG > SRR4302537.1364148/1‑94 (MQ=60)
AAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGA > SRR4302537.4020122/1‑94 (MQ=60)
AGATTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAG < SRR4302537.44365/94‑1 (MQ=60)
AGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAG < SRR4302537.3052528/94‑1 (MQ=60)
GAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGG < SRR4302537.5464035/94‑1 (MQ=60)
GAGTTCCCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGG < SRR4302537.1078723/94‑1 (MQ=60)
AGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGA > SRR4302537.1695394/1‑94 (MQ=60)
GTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGCATACGGCGCCCATCTTTCTGATGAGGAA > SRR4302537.1512110/1‑94 (MQ=60)
GTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAA < SRR4302537.470802/94‑1 (MQ=60)
GCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG > SRR4302537.185503/1‑94 (MQ=60)
CCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTG < SRR4302537.645834/94‑1 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCCCCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG < SRR4302537.174540/94‑1 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG > SRR4302537.177764/1‑94 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG < SRR4302537.114521/94‑1 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG < SRR4302537.4140259/94‑1 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG < SRR4302537.5651922/94‑1 (MQ=60)
CCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGG < SRR4302537.3444644/94‑1 (MQ=60)
CAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGT < SRR4302537.4917348/94‑1 (MQ=60)
AGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTC < SRR4302537.6126604/94‑1 (MQ=60)
AGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTC > SRR4302537.2691897/1‑94 (MQ=60)
AGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTC > SRR4302537.6311807/1‑94 (MQ=60)
GACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCT < SRR4302537.1491380/94‑1 (MQ=60)
TGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGT < SRR4302537.4385262/94‑1 (MQ=60)
TGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGT < SRR4302537.5611375/94‑1 (MQ=60)
TGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAACTGAATACGGCGCCCATCGTTCTGATGAGGAAAGTAGTCTGGC > SRR4302537.3287916/1‑94 (MQ=60)
TGTACCCACCCCTGGTGCGCACCACCCGCGCCGCGCTGGCCCGATTTGAAAGTGAATACGGCGCCCATTTTTCTGATGAGGAAAGAGGTCTGGT > SRR4302537.3495768/1‑94 (MQ=60)
GTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTC < SRR4302537.4695108/94‑1 (MQ=60)
TACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCG > SRR4302537.1292371/1‑94 (MQ=60)
CACGCCTGGTGCGCACCACCCGCGCGGCGCTGGGCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGT < SRR4302537.2138971/94‑1 (MQ=60)
CACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGGTTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGACAGTGGTCTGGTCGCGGA > SRR4302537.2622265/1‑94 (MQ=60)
ACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTG < SRR4302537.1925020/94‑1 (MQ=60)
GCTGGTGCGCACCACCCGCGCGCCGCTTGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATT < SRR4302537.5850862/94‑1 (MQ=60)
TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT < SRR4302537.1008629/94‑1 (MQ=60)
TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT > SRR4302537.4662141/1‑94 (MQ=60)
TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT < SRR4302537.4792385/94‑1 (MQ=60)
TGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTT > SRR4302537.6446002/1‑94 (MQ=60)
GGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTC < SRR4302537.6240398/94‑1 (MQ=60)
GGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTC < SRR4302537.4656309/94‑1 (MQ=60)
GGTGCGCACCACCCGCGCGGCGCTGGCCAGATTTGAAAGTAAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTC < SRR4302537.6513494/94‑1 (MQ=60)
GTCCGCACCGCCCGCGCGGGGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCG < SRR4302537.6114909/94‑1 (MQ=60)
CGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTG < SRR4302537.2822788/94‑1 (MQ=60)
CGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTG > SRR4302537.2467779/1‑94 (MQ=60)
CACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCC < SRR4302537.2241706/94‑1 (MQ=60)
CACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCC > SRR4302537.4144568/1‑94 (MQ=60)
CACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCC > SRR4302537.3853287/1‑94 (MQ=60)
ACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCT < SRR4302537.1544919/94‑1 (MQ=60)
CACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGG < SRR4302537.2970476/94‑1 (MQ=60)
CCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCT < SRR4302537.2387599/94‑1 (MQ=60)
CCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCGTGGCTA > SRR4302537.116053/1‑94 (MQ=60)
CGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAA > SRR4302537.3029087/1‑94 (MQ=60)
GCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAAT < SRR4302537.4056696/94‑1 (MQ=60)
CGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATG > SRR4302537.5243136/1‑94 (MQ=60)
CGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCGGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATG < SRR4302537.890056/94‑1 (MQ=60)
CGGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCA > SRR4302537.5130691/1‑94 (MQ=60)
GGCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAG < SRR4302537.1175772/94‑1 (MQ=60)
GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG < SRR4302537.2876003/94‑1 (MQ=60)
GCGCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGG < SRR4302537.3808345/94‑1 (MQ=60)
GCTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAA < SRR4302537.2345386/94‑1 (MQ=60)
CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA < SRR4302537.2724273/94‑1 (MQ=60)
CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA > SRR4302537.642132/1‑94 (MQ=60)
CTGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGAGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAA > SRR4302537.3728586/1‑94 (MQ=60)
TGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAA < SRR4302537.3032182/94‑1 (MQ=60)
TGGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAA > SRR4302537.4718136/1‑94 (MQ=60)
GGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAC < SRR4302537.6401957/94‑1 (MQ=60)
GGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAC < SRR4302537.5612395/94‑1 (MQ=60)
GGCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAAC > SRR4302537.3807904/1‑94 (MQ=60)
GCCGGATTTTAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACG < SRR4302537.4291333/94‑1 (MQ=60)
GCCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACG < SRR4302537.3038386/94‑1 (MQ=60)
CCGGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGTAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGA > SRR4302537.2168973/1‑94 (MQ=60)
GGATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATC > SRR4302537.4981629/1‑94 (MQ=60)
GATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCT < SRR4302537.40315/94‑1 (MQ=60)
GATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCT < SRR4302537.679671/94‑1 (MQ=60)
ATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTG > SRR4302537.3795219/1‑94 (MQ=60)
ATTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTG < SRR4302537.5403104/94‑1 (MQ=60)
TTTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGC > SRR4302537.434260/1‑94 (MQ=60)
TTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCA < SRR4302537.4336615/94‑1 (MQ=60)
TTGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCA > SRR4302537.1445358/1‑94 (MQ=60)
TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT < SRR4302537.3754878/94‑1 (MQ=60)
TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT < SRR4302537.52375/94‑1 (MQ=60)
TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT < SRR4302537.2591647/94‑1 (MQ=60)
TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT < SRR4302537.3518717/94‑1 (MQ=60)
TGAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCAT < SRR4302537.382491/94‑1 (MQ=60)
GAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATG < SRR4302537.3682748/94‑1 (MQ=60)
GAAAGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATG < SRR4302537.3666846/94‑1 (MQ=60)
AGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAA > SRR4302537.5137337/1‑94 (MQ=60)
AGTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAA < SRR4302537.5195511/94‑1 (MQ=60)
GTGAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAA > SRR4302537.5708621/1‑94 (MQ=60)
GAATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAAC < SRR4302537.1465198/94‑1 (MQ=60)
AATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACA < SRR4302537.6337677/94‑1 (MQ=60)
AATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACA < SRR4302537.2843971/94‑1 (MQ=60)
ATACGGCGCCCATCTTTCTGATGAGGAAAGTTGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAG < SRR4302537.3244227/94‑1 (MQ=60)
ATACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAG > SRR4302537.1412419/1‑94 (MQ=60)
TACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGA < SRR4302537.3573599/94‑1 (MQ=60)
ACGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGAT < SRR4302537.3276913/94‑1 (MQ=60)
CGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATT < SRR4302537.1333030/94‑1 (MQ=60)
CGGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATT < SRR4302537.5707111/94‑1 (MQ=60)
GGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA < SRR4302537.5233426/94‑1 (MQ=60)
GGCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTA < SRR4302537.3042276/94‑1 (MQ=60)
GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT < SRR4302537.2653124/94‑1 (MQ=60)
GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT < SRR4302537.5050115/94‑1 (MQ=60)
GCGCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTAT > SRR4302537.1037530/1‑94 (MQ=60)
GCCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC > SRR4302537.6316987/1‑94 (MQ=60)
|
ATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTC > NC_000913/2664296‑2664481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
