Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,735,727 C→T intergenic (+61/‑38) pheL → / → pheA PheL/chorismate mutase‑P

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,735,7270CT98.9% 1687.0 / 0.1 444intergenic (+61/‑38)pheL/pheAPheL/chorismate mutase‑P
Reads supporting (aligned to +/- strand):  ref base C (2/3);  new base T (197/242);  total (199/245)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01

Only 100 of 453 total aligned reads displayed.

TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGA  >  NC_000913/2735634‑2735817
                                                                                             |                                                                                           
  tttCTTCTCATTCTGTTTTACGTTGCCCGGAATGGGAGCCGTTTCGTCGTGTGAAACAGAATGTGAAGACGAACAATAAGGCCTCCCAAATTgg                                                                                           <  1:2246894/94‑1 (MQ=255)
  tttCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTgg                                                                                           <  2:6596090/94‑1 (MQ=255)
   ttcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggg                                                                                          >  1:3723436/1‑94 (MQ=255)
   ttcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggg                                                                                          <  1:8754664/94‑1 (MQ=255)
    tcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTgggg                                                                                         <  1:9678692/94‑1 (MQ=255)
    tcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggga                                                                                         <  1:6141872/94‑2 (MQ=255)
    tcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAAAAATAAGGCCTCCCCAATTgggg                                                                                         >  2:9473916/1‑94 (MQ=255)
     cttcGTATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggggg                                                                                        <  1:2924136/94‑1 (MQ=255)
     cttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggggg                                                                                        <  2:9685296/94‑1 (MQ=255)
     cttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggggg                                                                                        >  1:5325587/1‑94 (MQ=255)
     cttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTggggg                                                                                        <  2:835545/94‑1 (MQ=255)
         gCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ct                                                                                   >  1:4672927/1‑94 (MQ=255)
         ccATTCTTTTTTACCTGCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ct                                                                                   <  1:720974/93‑1 (MQ=255)
          cATTCTTTTTTGCCTTCCCCTGAAGGCGAGGCTTTTCGTCGTGTGAAACAGGATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctt                                                                                  <  2:1503816/94‑1 (MQ=255)
          cATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctt                                                                                  >  1:7050449/1‑94 (MQ=255)
          cATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctt                                                                                  <  1:10042671/94‑1 (MQ=255)
           aTTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Cttt                                                                                 >  2:2421812/1‑94 (MQ=255)
           aTTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Cttt                                                                                 >  2:10381263/1‑94 (MQ=255)
           aTTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Cttt                                                                                 <  1:1767827/94‑1 (MQ=255)
            ttCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctttt                                                                                <  2:1120229/94‑1 (MQ=255)
            ttCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctttt                                                                                <  2:8472841/94‑1 (MQ=255)
             tCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Cttttt                                                                               <  1:5428415/94‑1 (MQ=255)
              cTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCACATTGGGGGGC‑Ctgtttt                                                                              >  2:6020958/1‑94 (MQ=255)
              cTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctttttt                                                                              <  2:873020/94‑1 (MQ=255)
              cTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑Ctttttt                                                                              >  1:8878492/1‑94 (MQ=255)
               ttttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAATAATAAGGCCTCCCAAATTGGGGGGCTCtttttt                                                                              >  2:4142571/1‑94 (MQ=255)
               ttttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTa                                                                             <  2:2328351/94‑1 (MQ=255)
                tttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTAt                                                                            >  1:9946832/1‑94 (MQ=255)
                 ttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTAtt                                                                           <  2:392808/94‑1 (MQ=255)
                 ttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTAtt                                                                           <  2:5698496/94‑1 (MQ=255)
                  tttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTg                                                                          <  2:2666316/94‑1 (MQ=255)
                  tttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTg                                                                          >  1:6881628/1‑94 (MQ=255)
                  tttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTg                                                                          >  1:3585075/1‑94 (MQ=255)
                   ttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGa                                                                         >  2:3298910/1‑94 (MQ=255)
                    tACCTTCCCCTGAATGTGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGAt                                                                        >  2:1771482/1‑94 (MQ=255)
                     aCCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATa                                                                       <  1:7708262/94‑1 (MQ=255)
                      ccTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATaa                                                                      <  1:1632195/94‑1 (MQ=255)
                        ttCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACa                                                                    <  1:4248250/94‑1 (MQ=255)
                        ttCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACa                                                                    >  2:2759756/1‑94 (MQ=255)
                              tGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAgg                                                              >  1:6529421/1‑94 (MQ=255)
                               gAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGc                                                             <  1:738123/94‑1 (MQ=255)
                               gAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGc                                                             <  2:925639/94‑1 (MQ=255)
                               gAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGC‑CTTTTTTATTGATAACAAAAAGGc                                                             <  2:10587630/94‑1 (MQ=255)
                                  tGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAac                                                          >  1:5034674/1‑94 (MQ=255)
                                   gggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGAAAAAAAAAAGGCAaca                                                         >  2:3814437/1‑94 (MQ=255)
                                    ggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAacac                                                        >  1:7456949/1‑94 (MQ=255)
                                       ggCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTAt                                                     <  1:5536299/94‑1 (MQ=255)
                                       ggCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTAt                                                     <  2:4879050/94‑1 (MQ=255)
                                        gCGTTTCGTCGTGTGCACCGGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATACCAAAAAGGCAACACTATg                                                    <  1:9409089/94‑1 (MQ=255)
                                        gCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATg                                                    <  1:5245737/94‑1 (MQ=255)
                                         cGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGa                                                   >  1:4523402/1‑94 (MQ=255)
                                          gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGaa                                                  >  1:6419882/1‑93 (MQ=255)
                                          gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGAc                                                  >  2:3432195/1‑94 (MQ=255)
                                          gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGAc                                                  >  2:4478832/1‑94 (MQ=255)
                                          gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGAc                                                  >  1:10157336/1‑94 (MQ=255)
                                          gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGAc                                                  >  1:1084173/1‑94 (MQ=255)
                                           tttCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACa                                                 >  1:4066031/1‑94 (MQ=255)
                                            ttCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACAt                                                <  2:9867144/94‑1 (MQ=255)
                                             tcgtcgTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATc                                               <  2:10197678/94‑1 (MQ=255)
                                              cgtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCg                                              <  1:7884337/94‑1 (MQ=255)
                                              cgtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCg                                              <  1:81039/94‑1 (MQ=255)
                                              cgtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCg                                              <  1:8550677/94‑1 (MQ=255)
                                               gtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCgg                                             <  2:5195945/94‑1 (MQ=255)
                                                tcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGa                                            <  1:104131/94‑1 (MQ=255)
                                                 cgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGaa                                           >  1:9197838/1‑94 (MQ=255)
                                                 cgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGaa                                           >  1:389438/1‑94 (MQ=255)
                                                  gtgtGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGaaa                                          >  1:2146785/1‑94 (MQ=255)
                                                    gtgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAAc                                        <  2:2955264/94‑1 (MQ=255)
                                                     tgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAAcc                                       >  2:2200734/1‑94 (MQ=255)
                                                     tgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAAcc                                       <  2:4651122/94‑1 (MQ=255)
                                                      gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAAccc                                      <  2:7067057/94‑1 (MQ=255)
                                                        aaCAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGt                                    >  1:601761/1‑94 (MQ=255)
                                                           aGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc                                 >  2:7692607/1‑94 (MQ=255)
                                                            gAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGTGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACt                                <  1:4468182/94‑1 (MQ=255)
                                                            gAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACt                                <  1:1675571/94‑1 (MQ=255)
                                                            gAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACt                                <  2:1092110/94‑1 (MQ=255)
                                                              aTGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTgg                              >  2:7483331/1‑94 (MQ=255)
                                                              aTGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTgg                              >  2:7138890/1‑94 (MQ=255)
                                                              aTGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTgg                              >  2:6212152/1‑94 (MQ=255)
                                                              aTGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTgg                              >  1:8608995/1‑94 (MQ=255)
                                                                gCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgcg                            >  2:6719350/1‑94 (MQ=255)
                                                                  gAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgcgcg                          >  1:8965932/1‑93 (MQ=255)
                                                                   aaGACGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTg                         <  1:5584209/94‑1 (MQ=255)
                                                                       cGAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgag                     <  1:2522028/94‑1 (MQ=255)
                                                                        gAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgaga                    >  1:3251994/1‑94 (MQ=255)
                                                                        gAACAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgaga                    >  2:3588837/1‑94 (MQ=255)
                                                                           cAATAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGaa                 >  2:9150933/1‑94 (MQ=255)
                                                                            aaTAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGaaa                >  1:6653423/1‑94 (MQ=255)
                                                                              tAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAt              >  1:2256636/1‑94 (MQ=255)
                                                                              tAAGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAt              <  1:1047563/94‑1 (MQ=255)
                                                                               aaGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATc             >  1:8314427/1‑94 (MQ=255)
                                                                               aaGGCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATc             <  2:6382898/94‑1 (MQ=255)
                                                                                  gCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgc          <  2:814580/94‑1 (MQ=255)
                                                                                  gCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgc          <  2:9069683/94‑1 (MQ=255)
                                                                                  gCCTCCCAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgc          <  1:6340519/94‑1 (MQ=255)
                                                                                      cccAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcgcgc      <  1:1276236/94‑1 (MQ=255)
                                                                                      cccAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcgcgc      >  2:211841/1‑94 (MQ=255)
                                                                                        cAAATTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTg    >  2:10039442/1‑94 (MQ=255)
                                                                                         aaaTTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAATCCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTgg   <  2:9759403/94‑1 (MQ=255)
                                                                                         aaaTTGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTgg   <  2:6881628/94‑1 (MQ=255)
                                                                                             |                                                                                           
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGC‑CTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGA  >  NC_000913/2735634‑2735817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  >  NC_000913/2735634‑2735820
                                                                                             |                                                                                             
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGTCGAACAATAAGGCCTCCCAAATC                                                                                               >  SRR4302545.9299617/1‑94 (MQ=60)
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATT                                                                                               <  SRR4302545.2891060/94‑1 (MQ=60)
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATT                                                                                               <  SRR4302545.9404655/94‑1 (MQ=60)
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATT                                                                                               <  SRR4302545.483488/94‑1 (MQ=60)
 TTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTG                                                                                              <  SRR4302545.440265/94‑1 (MQ=60)
 TTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTG                                                                                              <  SRR4302545.3388652/94‑1 (MQ=60)
 TTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTG                                                                                              >  SRR4302545.6441526/1‑94 (MQ=60)
 TTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTG                                                                                              <  SRR4302545.1055425/94‑1 (MQ=60)
 TTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTG                                                                                              >  SRR4302545.10340787/1‑94 (MQ=60)
  TTTCTTCTCATTCTGTTTTACGTTGCCCGGAATGGGAGCCGTTTCGTCGTGTGAAACAGAATGTGAAGACGAACAATAAGGCCTCCCAAATTGG                                                                                             <  SRR4302545.2301619/94‑1 (MQ=60)
  TTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGG                                                                                             >  SRR4302545.2392629/1‑94 (MQ=60)
  TTTCTACGCATTCTTTTTTACCTTCCCCTGCATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAACGCCTCCCAAATTGG                                                                                             >  SRR4302545.6991742/1‑94 (MQ=60)
   TTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGG                                                                                            >  SRR4302545.5185476/1‑94 (MQ=60)
   TTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGG                                                                                            >  SRR4302545.2081366/1‑94 (MQ=60)
   TTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGG                                                                                            <  SRR4302545.3843369/94‑1 (MQ=60)
   TTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGG                                                                                            >  SRR4302545.3814944/1‑94 (MQ=60)
     CTTCGTATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGG                                                                                          <  SRR4302545.2995156/94‑1 (MQ=60)
     CTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGG                                                                                          >  SRR4302545.7252997/1‑94 (MQ=60)
     CTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGG                                                                                          >  SRR4302545.5463807/1‑94 (MQ=60)
      TTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGG                                                                                         >  SRR4302545.10875144/1‑94 (MQ=60)
      TTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGG                                                                                         <  SRR4302545.3998658/94‑1 (MQ=60)
       TCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGC                                                                                        <  SRR4302545.8840193/94‑1 (MQ=60)
        CGCATTGTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCC                                                                                       <  SRR4302545.7770254/94‑1 (MQ=60)
         GCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCT                                                                                      >  SRR4302545.4792168/1‑94 (MQ=60)
         GCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCT                                                                                      >  SRR4302545.6486922/1‑94 (MQ=60)
         CCATTCTTTTTTACCTGCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCT                                                                                      <  SRR4302545.737184/94‑1 (MQ=60)
          CATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTT                                                                                     >  SRR4302545.10751893/1‑94 (MQ=60)
          CATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTT                                                                                     <  SRR4302545.10428132/94‑1 (MQ=60)
          CATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTT                                                                                     <  SRR4302545.10340102/94‑1 (MQ=60)
          CATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTT                                                                                     >  SRR4302545.7245317/1‑94 (MQ=60)
           ATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTT                                                                                    <  SRR4302545.1810189/94‑1 (MQ=60)
            TTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTT                                                                                   >  SRR4302545.4323251/1‑94 (MQ=60)
             TCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTT                                                                                  >  SRR4302545.7193517/1‑94 (MQ=60)
             TCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTT                                                                                  >  SRR4302545.9586884/1‑94 (MQ=60)
             TCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTT                                                                                  <  SRR4302545.5570354/94‑1 (MQ=60)
             TCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTT                                                                                  >  SRR4302545.8047529/1‑94 (MQ=60)
              CTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTT                                                                                 >  SRR4302545.8277400/1‑94 (MQ=60)
                TTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTAT                                                                               <  SRR4302545.4215384/94‑1 (MQ=60)
                 TTTTACATTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGGACAATAAGGCCTCCCCAATTGGGGGGCCTTTTTTATT                                                                              >  SRR4302545.7495588/1‑94 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             >  SRR4302545.3672585/1‑94 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             <  SRR4302545.10858821/94‑1 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             <  SRR4302545.3667324/94‑1 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             <  SRR4302545.2285476/94‑1 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             >  SRR4302545.7070797/1‑94 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             <  SRR4302545.10549007/94‑1 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             >  SRR4302545.5337355/1‑94 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             <  SRR4302545.10549006/94‑1 (MQ=60)
                  TTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTG                                                                             >  SRR4302545.3800507/1‑94 (MQ=60)
                    TACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGAT                                                                           <  SRR4302545.8677973/94‑1 (MQ=60)
                     TCCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATA                                                                          <  SRR4302545.7386718/94‑1 (MQ=60)
                     ACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATA                                                                          <  SRR4302545.3187334/94‑1 (MQ=60)
                     ACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATA                                                                          <  SRR4302545.1723919/94‑1 (MQ=60)
                     ACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATA                                                                          <  SRR4302545.4238290/94‑1 (MQ=60)
                      CCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAA                                                                         <  SRR4302545.1670947/94‑1 (MQ=60)
                       CTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAAC                                                                        >  SRR4302545.9850374/1‑94 (MQ=60)
                        TTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACA                                                                       <  SRR4302545.5399045/94‑1 (MQ=60)
                        TTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACA                                                                       >  SRR4302545.2242320/1‑94 (MQ=60)
                        TTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACA                                                                       >  SRR4302545.9004067/1‑94 (MQ=60)
                         TCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAA                                                                      <  SRR4302545.2112623/94‑1 (MQ=60)
                         TCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAA                                                                      >  SRR4302545.7517358/1‑94 (MQ=60)
                          CCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAA                                                                     <  SRR4302545.8124423/94‑1 (MQ=60)
                           CCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAA                                                                    <  SRR4302545.10125869/94‑1 (MQ=60)
                           CCCTGAATGGGAGGCGTTTCGTCGTGAGAAACAGAATGCGCAGACGAACAATAAAGACTCCCAAATCTGGGGGCCTTTTTTATTGATTACAAAA                                                                    >  SRR4302545.1267012/1‑94 (MQ=60)
                            CCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAA                                                                   >  SRR4302545.9925288/1‑94 (MQ=60)
                             CTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAG                                                                  <  SRR4302545.2684877/94‑1 (MQ=60)
                             CTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAG                                                                  >  SRR4302545.6508702/1‑94 (MQ=60)
                             CTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAG                                                                  >  SRR4302545.9554665/1‑94 (MQ=60)
                              TGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGGGAAGACGAACAATAAGGGCTCCCAAATTGGGGGGCCCTTTTTATTGATAACAAAAAGG                                                                 >  SRR4302545.6708328/1‑94 (MQ=60)
                              TGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGG                                                                 <  SRR4302545.6102318/94‑1 (MQ=60)
                              TGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGG                                                                 <  SRR4302545.1704552/94‑1 (MQ=60)
                              TGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGG                                                                 >  SRR4302545.2238982/1‑94 (MQ=60)
                              TGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGG                                                                 <  SRR4302545.3474525/94‑1 (MQ=60)
                               GAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGC                                                                <  SRR4302545.754719/94‑1 (MQ=60)
                                   GGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACA                                                            >  SRR4302545.3962751/1‑94 (MQ=60)
                                   GGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACA                                                            <  SRR4302545.8538850/94‑1 (MQ=60)
                                   GGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACA                                                            <  SRR4302545.8619773/94‑1 (MQ=60)
                                    GGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACAC                                                           >  SRR4302545.438092/1‑94 (MQ=60)
                                      AGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAACGGCAACACTA                                                         >  SRR4302545.9009258/1‑94 (MQ=60)
                                      AGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTA                                                         <  SRR4302545.5018667/94‑1 (MQ=60)
                                      AGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTA                                                         >  SRR4302545.9009259/1‑94 (MQ=60)
                                       GGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTAT                                                        <  SRR4302545.2115297/94‑1 (MQ=60)
                                       GGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTAT                                                        <  SRR4302545.1439597/94‑1 (MQ=60)
                                       GGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTAT                                                        <  SRR4302545.5682472/94‑1 (MQ=60)
                                       GGCGTTTCATCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAGTTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTAT                                                        <  SRR4302545.1439294/94‑1 (MQ=60)
                                        GCGTTTCGTCGTGTGCACCGGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATACCAAAAAGGCAACACTATG                                                       <  SRR4302545.9685348/94‑1 (MQ=60)
                                        GCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATG                                                       <  SRR4302545.3517323/94‑1 (MQ=60)
                                         CGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGA                                                      >  SRR4302545.547479/1‑94 (MQ=60)
                                         CGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGA                                                      >  SRR4302545.5663189/1‑94 (MQ=60)
                                         CGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGA                                                      >  SRR4302545.4639267/1‑94 (MQ=60)
                                         CGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGA                                                      <  SRR4302545.7589812/94‑1 (MQ=60)
                                          GTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTTGGGGGACTTTTTTATTGATAACAAAAAGGCAACACTATCAC                                                     >  SRR4302545.1107667/1‑94 (MQ=60)
                                          GTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGttacaaaaaaggaaacactttgca                                                     >  SRR4302545.2302552/1‑70 (MQ=60)
                                          GTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGAC                                                     >  SRR4302545.6195763/1‑94 (MQ=60)
                                          GTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGAC                                                     >  SRR4302545.10457647/1‑94 (MQ=60)
                                          GTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGAA                                                     >  SRR4302545.6595416/1‑94 (MQ=60)
                                           TTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACA                                                    <  SRR4302545.4695352/94‑1 (MQ=60)
                                           TTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACA                                                    >  SRR4302545.4167838/1‑94 (MQ=60)
                                            TTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACAT                                                   <  SRR4302545.7235663/94‑1 (MQ=60)
                                            TTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACAT                                                   <  SRR4302545.9209117/94‑1 (MQ=60)
                                             TCGTCGTGTGAAACAGAATGCGATGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGATATC                                                  <  SRR4302545.5985233/94‑1 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGGAACACTATGACATCG                                                 <  SRR4302545.3707309/94‑1 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCG                                                 <  SRR4302545.3707308/94‑1 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCG                                                 <  SRR4302545.82879/94‑1 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCG                                                 >  SRR4302545.4427023/1‑94 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCG                                                 <  SRR4302545.8797897/94‑1 (MQ=60)
                                              CGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCG                                                 >  SRR4302545.675181/1‑94 (MQ=60)
                                               GTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGG                                                >  SRR4302545.235748/1‑94 (MQ=60)
                                               GTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGG                                                <  SRR4302545.9212688/94‑1 (MQ=60)
                                               GTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGG                                                >  SRR4302545.5476523/1‑94 (MQ=60)
                                               GTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGG                                                >  SRR4302545.5444604/1‑94 (MQ=60)
                                               GTAGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCGTTTTTTATTGATAACAAAAAGGCACCACTGTGACGTCGG                                                >  SRR4302545.5444603/1‑94 (MQ=60)
                                                TCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGA                                               <  SRR4302545.8194808/94‑1 (MQ=60)
                                                GCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGA                                               <  SRR4302545.5600576/94‑1 (MQ=60)
                                                 CGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGTGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAA                                              >  SRR4302545.4882819/1‑94 (MQ=60)
                                                 CGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAA                                              >  SRR4302545.6785932/1‑94 (MQ=60)
                                                 CGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAA                                              >  SRR4302545.398107/1‑94 (MQ=60)
                                                 CGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAA                                              >  SRR4302545.9467459/1‑94 (MQ=60)
                                                  GTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAA                                             <  SRR4302545.5371648/94‑1 (MQ=60)
                                                   TGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCCAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAA                                            >  SRR4302545.6700366/1‑94 (MQ=60)
                                                   TGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAA                                            >  SRR4302545.10908835/1‑94 (MQ=60)
                                                     TGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACC                                          <  SRR4302545.6752625/94‑1 (MQ=60)
                                                     TGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACC                                          >  SRR4302545.1029485/1‑94 (MQ=60)
                                                      GAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCC                                         >  SRR4302545.8985639/1‑94 (MQ=60)
                                                      GAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCC                                         <  SRR4302545.3256258/94‑1 (MQ=60)
                                                      GAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCC                                         >  SRR4302545.9168621/1‑94 (MQ=60)
                                                      GAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCC                                         >  SRR4302545.9168622/1‑94 (MQ=60)
                                                       AAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCG                                        <  SRR4302545.1607108/94‑1 (MQ=60)
                                                        AACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGT                                       >  SRR4302545.615322/1‑94 (MQ=60)
                                                         ACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTT                                      <  SRR4302545.10010641/94‑1 (MQ=60)
                                                         ACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTT                                      <  SRR4302545.4588270/94‑1 (MQ=60)
                                                          CAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTA                                     <  SRR4302545.3121634/94‑1 (MQ=60)
                                                          CAGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTA                                     >  SRR4302545.2640163/1‑94 (MQ=60)
                                                           AGAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAC                                    >  SRR4302545.6582828/1‑94 (MQ=60)
                                                            GAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGTGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACT                                   <  SRR4302545.4582191/94‑1 (MQ=60)
                                                            GAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACT                                   <  SRR4302545.5140735/94‑1 (MQ=60)
                                                            GAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACT                                   <  SRR4302545.7108137/94‑1 (MQ=60)
                                                            GAATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACT                                   <  SRR4302545.1715251/94‑1 (MQ=60)
                                                             aattccgaagCGAACCATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTG                                  <  SRR4302545.6673305/84‑1 (MQ=60)
                                                             AATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAGAAAGGCAACACTATGACATCGGAAAACCCGTTACTG                                  <  SRR4302545.117/94‑1 (MQ=60)
                                                             AATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTG                                  >  SRR4302545.10085399/1‑94 (MQ=60)
                                                             AATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTG                                  >  SRR4302545.1504592/1‑94 (MQ=60)
                                                              ATGCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGG                                 >  SRR4302545.8858150/1‑94 (MQ=60)
                                                                GCGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCG                               <  SRR4302545.6003220/94‑1 (MQ=60)
                                                                 CGAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGC                              >  SRR4302545.8857440/1‑94 (MQ=60)
                                                                  GAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCT                             <  SRR4302545.10472682/94‑1 (MQ=60)
                                                                  GAAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCT                             <  SRR4302545.7761234/94‑1 (MQ=60)
                                                                   AAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTG                            <  SRR4302545.5732115/94‑1 (MQ=60)
                                                                   AAGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTG                            <  SRR4302545.168828/94‑1 (MQ=60)
                                                                   AAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTG                            <  SRR4302545.7598320/94‑1 (MQ=60)
                                                                    AGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGC                           <  SRR4302545.4592048/94‑1 (MQ=60)
                                                                    AGACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGC                           <  SRR4302545.4592049/94‑1 (MQ=60)
                                                                     AACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCG                          <  SRR4302545.2310896/94‑1 (MQ=60)
                                                                      ACGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGA                         >  SRR4302545.9106142/1‑94 (MQ=60)
                                                                       CGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAG                        <  SRR4302545.7730028/94‑1 (MQ=60)
                                                                       CGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAG                        <  SRR4302545.4143313/94‑1 (MQ=60)
                                                                       CGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAG                        <  SRR4302545.2582964/94‑1 (MQ=60)
                                                                       CGAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCCAG                        >  SRR4302545.857322/1‑94 (MQ=60)
                                                                       CGAACAATAAGGCCTCCCAAATTGGCGGGCCTTTTTTATTGATAACAAAAATGCAACACTATGACATCGGAAAACCCGTTACTCGCGCTGCGAG                        >  SRR4302545.5629901/1‑94 (MQ=60)
                                                                        GAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGA                       >  SRR4302545.9818528/1‑94 (MQ=60)
                                                                        GAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGA                       >  SRR4302545.2606815/1‑94 (MQ=60)
                                                                        GAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGA                       >  SRR4302545.1018921/1‑94 (MQ=60)
                                                                        GAACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGA                       >  SRR4302545.7880471/1‑94 (MQ=60)
                                                                          ACAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGA                     <  SRR4302545.6596666/94‑1 (MQ=60)
                                                                           CAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAA                    >  SRR4302545.6675389/1‑94 (MQ=60)
                                                                           CAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAA                    <  SRR4302545.1763513/94‑1 (MQ=60)
                                                                           CAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAA                    >  SRR4302545.4148239/1‑94 (MQ=60)
                                                                           CAATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAACGACACACTATTACATCGGAAAAACCGTTACTtgcactacgagagca                    >  SRR4302545.3946958/1‑79 (MQ=60)
                                                                            AATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAA                   >  SRR4302545.7928305/1‑94 (MQ=60)
                                                                            AATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAA                   <  SRR4302545.5715887/94‑1 (MQ=60)
                                                                            AATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAA                   >  SRR4302545.6835853/1‑94 (MQ=60)
                                                                            AATAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAA                   <  SRR4302545.2346296/94‑1 (MQ=60)
                                                                              TAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAT                 <  SRR4302545.1070387/94‑1 (MQ=60)
                                                                              TAAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAT                 <  SRR4302545.5674984/94‑1 (MQ=60)
                                                                               AAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATC                >  SRR4302545.8555366/1‑94 (MQ=60)
                                                                               AAGGCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATC                >  SRR4302545.6416290/1‑94 (MQ=60)
                                                                                  GCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGC             <  SRR4302545.6513591/94‑1 (MQ=60)
                                                                                  GCCTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGC             <  SRR4302545.7059533/94‑1 (MQ=60)
                                                                                    CTCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGC           >  SRR4302545.7938822/1‑94 (MQ=60)
                                                                                     TCCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCG          >  SRR4302545.9639904/1‑94 (MQ=60)
                                                                                      CCCAAATTGGGGTGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGC         <  SRR4302545.8403885/94‑1 (MQ=60)
                                                                                      CCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGC         >  SRR4302545.2308838/1‑94 (MQ=60)
                                                                                      CCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGC         >  SRR4302545.6556340/1‑94 (MQ=60)
                                                                                      CCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGC         <  SRR4302545.4683748/94‑1 (MQ=60)
                                                                                      CCCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGC         <  SRR4302545.1304699/94‑1 (MQ=60)
                                                                                       CCAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCT        <  SRR4302545.9296025/94‑1 (MQ=60)
                                                                                        CAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTG       <  SRR4302545.6257734/94‑1 (MQ=60)
                                                                                        CAAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTG       <  SRR4302545.7627728/94‑1 (MQ=60)
                                                                                         AAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGG      <  SRR4302545.5454781/94‑1 (MQ=60)
                                                                                         AAATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGG      >  SRR4302545.3925536/1‑94 (MQ=60)
                                                                                          AATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGA     >  SRR4302545.8990185/1‑94 (MQ=60)
                                                                                          AATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGA     >  SRR4302545.10775762/1‑94 (MQ=60)
                                                                                          AATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGA     >  SRR4302545.10775763/1‑94 (MQ=60)
                                                                                           ATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGAT    <  SRR4302545.8636204/94‑1 (MQ=60)
                                                                                           ATTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGAT    >  SRR4302545.1802326/1‑94 (MQ=60)
                                                                                            TTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATG   <  SRR4302545.5143022/94‑1 (MQ=60)
                                                                                            TTGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATG   <  SRR4302545.8144283/94‑1 (MQ=60)
                                                                                             TGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  >  SRR4302545.2571773/1‑94 (MQ=60)
                                                                                             TGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  >  SRR4302545.3648170/1‑94 (MQ=60)
                                                                                             TGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  <  SRR4302545.9640362/94‑1 (MQ=60)
                                                                                             TGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  >  SRR4302545.7463011/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTTTTCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTTTTATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGA  >  NC_000913/2735634‑2735820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑