Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,781,027 C→G intergenic (‑151/+58) ypjA ← / ← b2648 putative ATP‑binding component of a transport system/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,781,0270CG100.0% 1522.8 / NA 467intergenic (‑151/+58)ypjA/b2648putative ATP‑binding component of a transport system/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (204/263);  total (204/263)

Only 100 of 475 total aligned reads displayed.

AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑G‑CCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT  >  NC_000913/2780937‑2781117
                                                                                            |                                                                                          
aaaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCa                                                                                          <  1:7601002/94‑1 (MQ=255)
aaaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCa                                                                                          >  1:93252/1‑94 (MQ=255)
 aaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaa                                                                                         >  1:3254788/1‑94 (MQ=255)
 aaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaa                                                                                         >  1:5650139/1‑94 (MQ=255)
 aaCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑GTCCGTTGGCaa                                                                                         <  2:10441888/94‑1 (MQ=255)
  aCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaa                                                                                        <  1:8563824/94‑1 (MQ=255)
  aCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaa                                                                                        <  2:8332983/94‑1 (MQ=255)
  aCGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaa                                                                                        >  1:8847992/1‑94 (MQ=255)
     cAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaata                                                                                     <  2:10239870/94‑1 (MQ=255)
      aGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaataa                                                                                    >  2:1607136/1‑94 (MQ=255)
       gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaataaa                                                                                   <  1:4111762/94‑1 (MQ=25)
        tGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaataaaa                                                                                  >  1:1174032/1‑94 (MQ=255)
         gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaataaaat                                                                                 >  2:3199271/1‑94 (MQ=255)
         gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCaaaataaaat                                                                                 <  2:627794/94‑1 (MQ=25)
          cgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATg                                                                                >  2:5864862/1‑94 (MQ=255)
           gcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGa                                                                               >  1:9583395/1‑94 (MQ=255)
           gcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGa                                                                               >  1:6256854/1‑94 (MQ=255)
            cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGAt                                                                              >  2:3953102/1‑94 (MQ=255)
            cTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGAt                                                                              <  2:2380251/94‑1 (MQ=25)
             tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGAtt                                                                             >  2:5271722/1‑94 (MQ=255)
              gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGAttt                                                                            <  1:6615695/94‑1 (MQ=25)
               aaGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTa                                                                           <  1:515487/94‑1 (MQ=37)
                aGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTAc                                                                          >  1:1845562/1‑94 (MQ=255)
                 gtgtGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACa                                                                         >  2:5016114/1‑94 (MQ=255)
                    tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTa                                                                           >  1:10051734/1‑89 (MQ=37)
                     ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAAt                                                                     <  2:4643450/94‑1 (MQ=37)
                     ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAAt                                                                     <  1:1331180/94‑1 (MQ=37)
                      gTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATc                                                                    <  1:9130775/94‑1 (MQ=37)
                      gTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCATATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATc                                                                    <  1:8677939/94‑1 (MQ=37)
                       ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCg                                                                   >  2:6375250/1‑94 (MQ=255)
                       ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCg                                                                   <  1:6119307/94‑1 (MQ=255)
                       ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCg                                                                   <  1:7886476/94‑1 (MQ=255)
                       ttGGATAAAAAAGTCAATCCATTCAGGAAAAACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGCTGGCAAAACAAAATGATTTACATAATCg                                                                   >  2:9392030/1‑94 (MQ=37)
                        tGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGt                                                                  >  2:8936682/1‑94 (MQ=255)
                        tGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGt                                                                  >  1:8247206/1‑94 (MQ=255)
                          gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                                <  2:6965927/94‑1 (MQ=38)
                          gATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                                >  2:556712/1‑94 (MQ=255)
                           aTAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTc                                                               >  1:6399590/1‑94 (MQ=255)
                            tAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCt                                                              >  2:6630429/1‑94 (MQ=255)
                              aaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                            <  2:7601907/94‑1 (MQ=37)
                              aaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                            >  2:6720253/1‑94 (MQ=255)
                               aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgat                                                           >  1:1405992/1‑94 (MQ=255)
                               aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgat                                                           >  2:1325281/1‑94 (MQ=255)
                                aaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                                          <  2:4723993/94‑1 (MQ=255)
                                   gTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAat                                                       >  1:2153661/1‑94 (MQ=255)
                                   gTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAat                                                       <  2:2113638/94‑1 (MQ=25)
                                    tCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                                      <  1:6972826/94‑1 (MQ=255)
                                        tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtctt                                                  <  1:9854265/94‑1 (MQ=25)
                                          cATTCAGGAAATACGGGCGTATTCTTTTCGTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttct                                                <  2:2941405/94‑1 (MQ=21)
                                           aTTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTg                                               >  2:2498378/1‑94 (MQ=255)
                                           aTTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTg                                               <  2:9627282/94‑1 (MQ=25)
                                              cAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTc                                            <  2:9122571/94‑1 (MQ=21)
                                               aGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTca                                           <  1:1960265/94‑1 (MQ=21)
                                                ggAAATACGGGCGGATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcac                                          <  2:5049984/94‑1 (MQ=18)
                                                 gAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcaca                                         >  1:10252901/1‑94 (MQ=255)
                                                 gAAATACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcaca                                         >  1:6762495/1‑94 (MQ=255)
                                                  aaaTACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACAt                                        >  2:1914141/1‑94 (MQ=255)
                                                  aaaTACGGGCGGATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACAt                                        <  2:9493340/94‑1 (MQ=18)
                                                   aaTACGGGCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATa                                       <  1:3655891/94‑1 (MQ=255)
                                                        gggCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAt                                  <  2:8482904/94‑1 (MQ=255)
                                                         ggCGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATc                                 <  1:7300133/94‑1 (MQ=17)
                                                           cGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcac                               <  1:3033083/94‑1 (MQ=17)
                                                           cGTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcac                               <  1:5782473/94‑1 (MQ=255)
                                                            gTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                              >  2:7783922/1‑94 (MQ=255)
                                                            gTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                              <  1:3407011/94‑1 (MQ=255)
                                                            gTATTCTTTTCTTTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                              >  2:6037326/1‑94 (MQ=255)
                                                               ttcttttcttTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACaa                           <  2:2638860/94‑1 (MQ=255)
                                                               ttcttttcttTCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACaa                           <  2:4466999/94‑1 (MQ=255)
                                                                tcttttctttCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                          >  2:7495079/1‑94 (MQ=255)
                                                                 cttttctttCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTTCATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa                         >  1:2872010/1‑94 (MQ=14)
                                                                 cttttctttCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa                         >  1:4627749/1‑94 (MQ=17)
                                                                  ttttctttCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa                        >  2:8530788/1‑94 (MQ=17)
                                                                  ttttctttCGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATaa                        <  2:8192164/94‑1 (MQ=255)
                                                                   tttctttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAc                       <  2:3400354/94‑1 (MQ=17)
                                                                     tctgtcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt                     <  2:1087583/94‑1 (MQ=14)
                                                                      ctttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt                    >  1:2541711/1‑94 (MQ=255)
                                                                      ctttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt                    >  1:1721476/1‑94 (MQ=17)
                                                                       tttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg                   >  2:10101556/1‑94 (MQ=255)
                                                                       tttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg                   >  2:2051348/1‑94 (MQ=17)
                                                                       tttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg                   <  2:6492645/94‑1 (MQ=255)
                                                                        ttcGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACCTAAAAATCACACAATAACTTTga                  >  2:2769485/1‑94 (MQ=17)
                                                                          cGACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTgaga                <  1:1498508/94‑1 (MQ=255)
                                                                           gACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt               <  1:5924212/94‑1 (MQ=255)
                                                                           gACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt               >  1:2942047/1‑94 (MQ=255)
                                                                           gACAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt               >  2:7266911/1‑94 (MQ=18)
                                                                            aCAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATc              <  1:4925079/94‑1 (MQ=255)
                                                                            aCAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATc              <  2:370214/94‑1 (MQ=255)
                                                                             cAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCg             <  1:3899048/94‑1 (MQ=255)
                                                                             cAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCg             <  1:8887681/94‑1 (MQ=255)
                                                                             cAATGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCg             >  1:4799597/1‑94 (MQ=255)
                                                                              aaTGAGG‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGc            <  2:8818405/94‑1 (MQ=255)
                                                                                tgagg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAg          <  2:1166741/90‑1 (MQ=255)
                                                                                 gagg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGa         >  1:3467110/4‑94 (MQ=255)
                                                                                 gagg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGa         <  1:4430607/91‑1 (MQ=255)
                                                                                 gagg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGa         <  2:4231328/91‑1 (MQ=255)
                                                                                  agg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTTTGCTCACATAAAAATCACACAATAACTTTAAGATCGCAGAt        >  2:3567790/3‑94 (MQ=18)
                                                                                  agg‑CCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAt        >  1:2382348/3‑94 (MQ=255)
                                                                                      ccGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGt     <  2:7884093/94‑1 (MQ=255)
                                                                                       cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGtt    >  2:5651180/1‑94 (MQ=255)
                                                                                       cGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGtt    >  1:5934948/1‑94 (MQ=255)
                                                                                            |                                                                                          
AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGA‑G‑CCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT  >  NC_000913/2780937‑2781117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 245 total aligned reads displayed.
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑A‑GCCGTTGC‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  >  NC_000913/2780936‑2781120
                                                                                             |                                                                                              
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑C                                                                                              <  SRR4302545.1747489/94‑1 (MQ=60)
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑C                                                                                              >  SRR4302545.2371131/1‑94 (MQ=60)
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑C                                                                                              >  SRR4302545.2566220/1‑94 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CA                                                                                             >  SRR4302545.7973880/1‑94 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CA                                                                                             >  SRR4302545.95400/1‑94 (MQ=60)
 AAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATACAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CA                                                                                             <  SRR4302545.985684/94‑1 (MQ=60)
  AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAA                                                                                            >  SRR4302545.5800672/1‑94 (MQ=60)
  AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAA                                                                                            >  SRR4302545.6284184/1‑94 (MQ=60)
  AACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAA                                                                                            >  SRR4302545.3334676/1‑94 (MQ=60)
   ACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAA                                                                                           >  SRR4302545.9104970/1‑94 (MQ=60)
     GCAGTGCGCTGAATGGTGGTTTGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAAT                                                                                         <  SRR4302545.3399400/94‑1 (MQ=60)
      CAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATA                                                                                        >  SRR4302545.1297970/1‑94 (MQ=60)
      CAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATA                                                                                        <  SRR4302545.1888160/94‑1 (MQ=60)
       AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAA                                                                                       <  SRR4302545.9113996/94‑1 (MQ=60)
       AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAA                                                                                       >  SRR4302545.4790691/1‑94 (MQ=60)
       AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAA                                                                                       >  SRR4302545.309161/1‑94 (MQ=60)
       AGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAA                                                                                       <  SRR4302545.9113995/94‑1 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAA                                                                                      >  SRR4302545.7234752/1‑94 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAA                                                                                      <  SRR4302545.4214647/94‑1 (MQ=60)
        GTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAA                                                                                      <  SRR4302545.2243497/94‑1 (MQ=60)
          GCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAAT                                                                                    <  SRR4302545.8082165/94‑1 (MQ=60)
          GCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATGCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAAT                                                                                    <  SRR4302545.4407273/94‑1 (MQ=60)
          GCGCTCATGTGTGGTTGGATAAAAAAGTTAATCCATTTAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAAT                                                                                    <  SRR4302545.8516415/94‑1 (MQ=60)
           CGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATG                                                                                   >  SRR4302545.6478138/1‑94 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATCAAATGA                                                                                  >  SRR4302545.1401835/1‑94 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGA                                                                                  >  SRR4302545.6427401/1‑94 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGA                                                                                  <  SRR4302545.3713593/94‑1 (MQ=60)
            GCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGA                                                                                  >  SRR4302545.9865826/1‑94 (MQ=60)
              TGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATT                                                                                <  SRR4302545.9576712/94‑1 (MQ=60)
               GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTT                                                                               >  SRR4302545.10046991/1‑94 (MQ=60)
               GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTT                                                                               <  SRR4302545.6796949/94‑1 (MQ=60)
               GAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTT                                                                               <  SRR4302545.6877009/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTA                                                                              <  SRR4302545.527014/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTA                                                                              <  SRR4302545.1260628/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTA                                                                              <  SRR4302545.1096225/94‑1 (MQ=60)
                AAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTA                                                                              <  SRR4302545.6312459/94‑1 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTAC                                                                             >  SRR4302545.1395413/1‑94 (MQ=60)
                 AGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTAC                                                                             >  SRR4302545.1890530/1‑94 (MQ=60)
                  GTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACA                                                                            <  SRR4302545.908033/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCTGTTGG‑CAAAATAAAATGATTTACATA                                                                          <  SRR4302545.192963/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATA                                                                          <  SRR4302545.5856566/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATA                                                                          <  SRR4302545.3253345/94‑1 (MQ=60)
                    GTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATA                                                                          >  SRR4302545.3489116/1‑94 (MQ=60)
                     TGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAA                                                                         <  SRR4302545.96561/94‑1 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATC                                                                       <  SRR4302545.9398852/94‑1 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATC                                                                       <  SRR4302545.2507828/94‑1 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATC                                                                       >  SRR4302545.1638282/1‑94 (MQ=60)
                       GTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCATATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATC                                                                       <  SRR4302545.8929676/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302545.6285668/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302545.7710453/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302545.6285666/94‑1 (MQ=60)
                        TTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCG                                                                      <  SRR4302545.6285665/94‑1 (MQ=60)
                         TGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGT                                                                     >  SRR4302545.8861358/1‑94 (MQ=60)
                          GGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTT                                                                    >  SRR4302545.1297983/1‑94 (MQ=60)
                           GATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTT                                                                   <  SRR4302545.2128332/94‑1 (MQ=60)
                           GATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTT                                                                   <  SRR4302545.797383/94‑1 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTC                                                                  <  SRR4302545.2725801/94‑1 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTC                                                                  >  SRR4302545.6574584/1‑94 (MQ=60)
                            ATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTC                                                                  <  SRR4302545.385805/94‑1 (MQ=60)
                             TAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCT                                                                 <  SRR4302545.2339079/94‑1 (MQ=60)
                               AAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGA                                                               >  SRR4302545.7236459/1‑94 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGCG‑GCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              >  SRR4302545.7073807/1‑94 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              >  SRR4302545.7073808/1‑94 (MQ=60)
                                AAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGAT                                                              <  SRR4302545.688604/94‑1 (MQ=60)
                                   AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                           <  SRR4302545.3576548/94‑1 (MQ=60)
                                   AGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAA                                                           <  SRR4302545.3576549/94‑1 (MQ=60)
                                    GTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAAT                                                          <  SRR4302545.8844161/94‑1 (MQ=60)
                                    GTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAAT                                                          >  SRR4302545.2206338/1‑94 (MQ=60)
                                     TCAATCCATTCAGGAAATACGGGTGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                         <  SRR4302545.6593301/94‑1 (MQ=60)
                                     TCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                         >  SRR4302545.831130/1‑94 (MQ=60)
                                     TCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATA                                                         <  SRR4302545.7165087/94‑1 (MQ=60)
                                      CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        >  SRR4302545.5400128/1‑94 (MQ=60)
                                      CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        <  SRR4302545.4538385/94‑1 (MQ=60)
                                      CAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        >  SRR4302545.4090229/1‑94 (MQ=60)
                                      AAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATAT                                                        <  SRR4302545.2560051/94‑1 (MQ=60)
                                       AATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATC                                                       <  SRR4302545.5234951/94‑1 (MQ=60)
                                       AATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATC                                                       <  SRR4302545.5234952/94‑1 (MQ=60)
                                       AATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATC                                                       >  SRR4302545.5967807/1‑94 (MQ=60)
                                        ATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCT                                                      <  SRR4302545.369611/94‑1 (MQ=60)
                                         TCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTT                                                     <  SRR4302545.10147145/94‑1 (MQ=60)
                                         TCCATCCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTT                                                     <  SRR4302545.8481095/94‑1 (MQ=60)
                                          CCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTC                                                    <  SRR4302545.1492464/94‑1 (MQ=60)
                                          CCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTC                                                    >  SRR4302545.954667/1‑94 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   >  SRR4302545.3403259/1‑94 (MQ=60)
                                           CATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCT                                                   <  SRR4302545.2546896/94‑1 (MQ=60)
                                            ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTG                                                  >  SRR4302545.1745074/1‑94 (MQ=60)
                                            ATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTG                                                  <  SRR4302545.3797155/94‑1 (MQ=60)
                                             TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                                 >  SRR4302545.6197946/1‑94 (MQ=60)
                                             TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                                 >  SRR4302545.7539290/1‑94 (MQ=60)
                                             TTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGC                                                 >  SRR4302545.7538969/1‑94 (MQ=60)
                                                AGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCA                                              <  SRR4302545.2008874/94‑1 (MQ=60)
                                                AGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCA                                              >  SRR4302545.10509995/1‑94 (MQ=60)
                                                AGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCA                                              <  SRR4302545.2519293/94‑1 (MQ=60)
                                                 GGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                             >  SRR4302545.8674755/1‑94 (MQ=60)
                                                 GGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCAC                                             <  SRR4302545.8508198/94‑1 (MQ=60)
                                                  GAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACA                                            >  SRR4302545.6947926/1‑94 (MQ=60)
                                                  GAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACA                                            >  SRR4302545.10555518/1‑94 (MQ=60)
                                                  GAAATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACA                                            >  SRR4302545.3502807/1‑94 (MQ=60)
                                                    AATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATA                                          >  SRR4302545.10130616/1‑94 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         >  SRR4302545.10150072/1‑94 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         <  SRR4302545.6123377/94‑1 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         <  SRR4302545.10811747/94‑1 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         >  SRR4302545.6676349/1‑94 (MQ=60)
                                                     ATACGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAA                                         >  SRR4302545.9711942/1‑94 (MQ=60)
                                                        CGGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAA                                      >  SRR4302545.1948335/1‑94 (MQ=60)
                                                         GGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                                     >  SRR4302545.5632049/1‑94 (MQ=60)
                                                         GGGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAT                                     >  SRR4302545.9385870/1‑94 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    <  SRR4302545.1992399/94‑1 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    <  SRR4302545.6475211/94‑1 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    >  SRR4302545.5041097/1‑94 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    >  SRR4302545.7281912/1‑94 (MQ=60)
                                                          GGCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATC                                    <  SRR4302545.7504844/94‑1 (MQ=60)
                                                           GCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                                   <  SRR4302545.465915/94‑1 (MQ=60)
                                                           GCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                                   <  SRR4302545.4012804/94‑1 (MQ=60)
                                                           GCGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCA                                   <  SRR4302545.7949069/94‑1 (MQ=60)
                                                            CGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                                  <  SRR4302545.3107348/94‑1 (MQ=60)
                                                            CGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                                  <  SRR4302545.5937931/94‑1 (MQ=60)
                                                            CGTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCAC                                  <  SRR4302545.4133930/94‑1 (MQ=60)
                                                             GTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 <  SRR4302545.9355158/94‑1 (MQ=60)
                                                             GTATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACA                                 <  SRR4302545.3490113/94‑1 (MQ=60)
                                                              TATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACAC                                >  SRR4302545.353158/1‑94 (MQ=59)
                                                              TATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACAC                                <  SRR4302545.8817875/94‑1 (MQ=59)
                                                               ATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               >  SRR4302545.2204531/1‑94 (MQ=56)
                                                               ATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               >  SRR4302545.6646300/1‑94 (MQ=56)
                                                               ATTCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACA                               <  SRR4302545.3028801/94‑1 (MQ=56)
                                                                 TCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             >  SRR4302545.4124155/1‑94 (MQ=52)
                                                                 TCTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAT                             <  SRR4302545.6979416/94‑1 (MQ=52)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTTCATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            >  SRR4302545.2941461/1‑94 (MQ=47)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACTATA                            <  SRR4302545.10484881/94‑1 (MQ=48)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            <  SRR4302545.1296444/94‑1 (MQ=49)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            >  SRR4302545.4746067/1‑94 (MQ=49)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            >  SRR4302545.10658722/1‑94 (MQ=49)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            <  SRR4302545.2986697/94‑1 (MQ=49)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            <  SRR4302545.1530071/94‑1 (MQ=49)
                                                                  CTTTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATA                            >  SRR4302545.1363653/1‑94 (MQ=49)
                                                                    TTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302545.6008072/94‑1 (MQ=47)
                                                                    TTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          >  SRR4302545.8445646/1‑94 (MQ=47)
                                                                    TTTCTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302545.9769118/94‑1 (MQ=47)
                                                                    TTTCTTTCGAAAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAC                          <  SRR4302545.6008071/94‑1 (MQ=45)
                                                                      TCTCTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTT                        >  SRR4302545.10453938/1‑94 (MQ=45)
                                                                       CTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                       >  SRR4302545.2603066/1‑94 (MQ=49)
                                                                       CTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                       >  SRR4302545.1762474/1‑94 (MQ=49)
                                                                       CTTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCATTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTT                       >  SRR4302545.2872068/1‑94 (MQ=47)
                                                                        TTTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTG                      <  SRR4302545.5048895/94‑1 (MQ=52)
                                                                         TTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA                     >  SRR4302545.909230/1‑94 (MQ=54)
                                                                         TTCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGA                     <  SRR4302545.3532888/94‑1 (MQ=54)
                                                                          TCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAG                    <  SRR4302545.5714270/94‑1 (MQ=56)
                                                                          TCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAG                    <  SRR4302545.8662050/94‑1 (MQ=56)
                                                                          TCGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAG                    >  SRR4302545.1491629/1‑94 (MQ=56)
                                                                           CGACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGA                   <  SRR4302545.1533186/94‑1 (MQ=59)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  >  SRR4302545.3013623/1‑94 (MQ=60)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  >  SRR4302545.9425926/1‑94 (MQ=60)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  <  SRR4302545.6084007/94‑1 (MQ=60)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  >  SRR4302545.3013622/1‑94 (MQ=60)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  <  SRR4302545.6084006/94‑1 (MQ=60)
                                                                            GACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAT                  <  SRR4302545.2257849/94‑1 (MQ=60)
                                                                             ACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 >  SRR4302545.3056897/1‑94 (MQ=60)
                                                                             ACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302545.3311786/94‑1 (MQ=60)
                                                                             ACAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 <  SRR4302545.5049998/94‑1 (MQ=60)
                                                                             ACAATG‑AGGCAGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATC                 >  SRR4302545.6944078/1‑94 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                <  SRR4302545.9145963/94‑1 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                <  SRR4302545.1837248/94‑1 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                <  SRR4302545.4894443/94‑1 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                >  SRR4302545.4922324/1‑94 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                >  SRR4302545.4922325/1‑94 (MQ=60)
                                                                              CAATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCG                >  SRR4302545.5517934/1‑94 (MQ=60)
                                                                               AATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC               >  SRR4302545.2860426/1‑94 (MQ=60)
                                                                               AATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGC               >  SRR4302545.6488077/1‑94 (MQ=60)
                                                                                ATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA              <  SRR4302545.6923166/94‑1 (MQ=60)
                                                                                ATG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCA              <  SRR4302545.5153092/94‑1 (MQ=60)
                                                                                 TG‑AGGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAG             <  SRR4302545.1740527/94‑1 (MQ=60)
                                                                                   gagGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA            >  SRR4302545.5092310/4‑94 (MQ=60)
                                                                                   gagGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA            >  SRR4302545.4735019/4‑94 (MQ=60)
                                                                                   gagGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGA            <  SRR4302545.4543284/91‑1 (MQ=60)
                                                                                    agGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           <  SRR4302545.5825707/92‑1 (MQ=60)
                                                                                    agGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           <  SRR4302545.8963198/92‑1 (MQ=60)
                                                                                    agGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           <  SRR4302545.5825706/92‑1 (MQ=60)
                                                                                    agGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGAT           >  SRR4302545.2440166/3‑94 (MQ=60)
                                                                                    agGCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTATGAGATCGCAGAT           >  SRR4302545.4589978/3‑94 (MQ=60)
                                                                                    G‑GCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATT          <  SRR4302545.888107/94‑1 (MQ=60)
                                                                                    G‑GCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATT          <  SRR4302545.8938541/94‑1 (MQ=60)
                                                                                      GCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG         <  SRR4302545.4855026/94‑1 (MQ=60)
                                                                                      GCCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTG         <  SRR4302545.823271/94‑1 (MQ=60)
                                                                                       CCGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGT        >  SRR4302545.1848607/1‑94 (MQ=60)
                                                                                        CGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTT       >  SRR4302545.6095082/1‑94 (MQ=60)
                                                                                        CGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTT       >  SRR4302545.6095083/1‑94 (MQ=60)
                                                                                        CGTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTT       >  SRR4302545.3178370/1‑94 (MQ=60)
                                                                                         GTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT      >  SRR4302545.3980074/1‑94 (MQ=60)
                                                                                         GTTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTT      >  SRR4302545.3861417/1‑94 (MQ=60)
                                                                                          TTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302545.4301142/94‑1 (MQ=60)
                                                                                          TTGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302545.1391623/94‑1 (MQ=60)
                                                                                           TGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTA    >  SRR4302545.3850288/1‑94 (MQ=60)
                                                                                           TGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTA    >  SRR4302545.10336033/1‑94 (MQ=60)
                                                                                           TGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTA    <  SRR4302545.10710366/94‑1 (MQ=60)
                                                                                           TGG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTA    >  SRR4302545.937147/1‑94 (MQ=60)
                                                                                           TGCGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTT     <  SRR4302545.1391622/94‑1 (MQ=60)
                                                                                            GG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTAC   >  SRR4302545.8571913/1‑94 (MQ=60)
                                                                                            GG‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTAC   >  SRR4302545.10482447/1‑94 (MQ=60)
                                                                                             G‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  <  SRR4302545.7044513/94‑1 (MQ=60)
                                                                                             G‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  >  SRR4302545.7829520/1‑94 (MQ=60)
                                                                                             |                                                                                              
TAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATG‑A‑GCCGTTGC‑CAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAGATTGTTTTACT  >  NC_000913/2780936‑2781120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑