Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,812,859	Δ1 bp	intergenic (‑105/+46)	ygaG ← / ← gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,812,858	0	C	.	99.7%	1415.2 / ‑3.6	310	intergenic (‑104/+47)	ygaG/gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase
Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (185/124); total (185/125)
Fisher's exact test for biased strand distribution p-value = 4.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

CCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCA  >  NC_000913/2812765‑2812947

ccGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTc                                                                                           <  2:6376854/94‑1 (MQ=255)

  ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcag                                                                                         >  2:7066827/1‑92 (MQ=255)

  ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcag                                                                                         >  1:3275297/1‑92 (MQ=255)

    tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcagag                                                                                       >  2:9646104/1‑90 (MQ=255)

    tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcagag                                                                                       <  1:4527092/94‑5 (MQ=255)

     aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAgaga                                                                                     <  1:6296068/94‑1 (MQ=255)

     aaTTTTTTTAAAAATTTTCTGAACCCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAgaga                                                                                     <  2:484473/94‑1 (MQ=255)

      aTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt                                                                                    >  1:20146/1‑94 (MQ=255)

      aTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt                                                                                    >  2:2224033/1‑94 (MQ=255)

       tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATg                                                                                   >  1:5144525/1‑94 (MQ=255)

       tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATg                                                                                   >  1:7579282/1‑94 (MQ=255)

         tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaa                                                                                 >  2:2813151/1‑94 (MQ=255)

         tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaa                                                                                 <  1:8604360/94‑1 (MQ=255)

         tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaa                                                                                 >  1:2996839/1‑94 (MQ=255)

         tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaa                                                                                 >  2:8658763/1‑94 (MQ=255)

              aaaaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAtttt                                                                            <  2:742661/94‑1 (MQ=255)

               aaaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTg                                                                           <  2:4307946/94‑1 (MQ=255)

                 aaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGc                                                                         >  1:9064232/1‑94 (MQ=255)

                  aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                        <  1:216280/94‑1 (MQ=255)

                  aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                        >  2:6923191/1‑94 (MQ=255)

                  aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                        >  2:8910884/1‑94 (MQ=255)

                  aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTAAATT‑CAGAGATGAAATTTTGGcc                                                                        >  1:5835983/1‑94 (MQ=255)

                   ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCa                                                                       <  1:8107042/94‑1 (MQ=255)

                   ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCa                                                                       <  1:6407967/94‑1 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      >  1:10130317/1‑94 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      >  1:9585757/1‑94 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      <  1:10043255/94‑1 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      <  1:2783912/94‑1 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      >  1:1363966/1‑94 (MQ=255)

                    tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      >  1:10508934/1‑94 (MQ=255)

                     ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACt                                                                     <  1:4397006/94‑1 (MQ=255)

                       cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAAATGAAATTTTGGCCACTCa                                                                   >  1:3676008/1‑94 (MQ=255)

                        tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                  <  1:10309005/94‑1 (MQ=255)

                        tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                  <  2:7660177/94‑1 (MQ=255)

                        tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTCGtcactcac                                                                  >  1:8290383/1‑94 (MQ=255)

                        cgAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                  <  2:7144087/93‑1 (MQ=255)

                         gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg                                                                 <  2:9028158/94‑1 (MQ=255)

                         gAACTCATTCTTCCCGGGCGAGTCTGAGTATATGAAAGACGCGAATTTGTTATCATCATCCCTGAATT‑CAGAGATACAATTTTGGCCACTCACg                                                                 <  1:9397011/94‑1 (MQ=255)

                            ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                              <  1:8445125/94‑1 (MQ=255)

                            ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                              <  2:5918799/94‑1 (MQ=255)

                               tttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAAGT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGc                                                           >  2:9358714/1‑94 (MQ=255)

                                ttcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc                                                          <  2:2945005/94‑1 (MQ=255)

                                 tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                         <  1:8517553/94‑1 (MQ=255)

                                 tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                         <  2:9594908/94‑1 (MQ=255)

                                  cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                        <  1:9997226/94‑1 (MQ=255)

                                  cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                        >  2:4550992/1‑94 (MQ=255)

                                   ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt                                                       >  2:1511901/1‑94 (MQ=255)

                                   ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt                                                       <  2:3409903/94‑1 (MQ=255)

                                    tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtttt                                                      <  1:4843301/94‑1 (MQ=255)

                                    tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtttt                                                      >  2:3107176/1‑94 (MQ=255)

                                      ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttc                                                    <  2:7921602/94‑1 (MQ=255)

                                       cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                                   <  2:6687936/94‑1 (MQ=255)

                                        aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt                                                  >  2:10223083/1‑94 (MQ=255)

                                           cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGACTCTCACGAGTGGCCTttttcttttc                                               <  1:1807689/94‑1 (MQ=255)

                                            gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTtttcttttct                                              >  1:5438771/1‑94 (MQ=255)

                                             aGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTg                                             <  2:3312093/94‑1 (MQ=255)

                                                 tGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTcgg                                         >  1:3106205/1‑92 (MQ=255)

                                                 tGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg                                         <  1:45661/94‑1 (MQ=255)

                                                 tGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg                                         >  1:6678322/1‑94 (MQ=255)

                                                     tataTGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                                     >  1:7261074/1‑94 (MQ=255)

                                                      atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg                                    <  2:3752149/94‑1 (MQ=255)

                                                       tatGAAAGTCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCGTTTTTCTTTTCTGTCAGGCgggt                                   >  1:6846007/1‑94 (MQ=255)

                                                       tatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                   <  2:1244368/94‑1 (MQ=255)

                                                        atGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGCGGCCTTTTTCTTTTCTGTCAGGCGTGtt                                  >  2:2738171/1‑94 (MQ=255)

                                                         tGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttt                                 >  1:2259851/1‑94 (MQ=255)

                                                           aaaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                               <  2:3946223/94‑1 (MQ=255)

                                                           aaaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                               >  1:8020609/1‑94 (MQ=255)

                                                             aGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTT‑TGTCAGGGGTGGTTTTCCa                            >  2:1905243/1‑94 (MQ=255)

                                                               aCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAg                           >  2:10368903/1‑94 (MQ=255)

                                                                cgcgCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGc                          <  1:7329270/94‑1 (MQ=255)

                                                                 gcgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGcc                         >  1:7198095/1‑94 (MQ=255)

                                                                 gcgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGcc                         >  1:9898375/1‑94 (MQ=255)

                                                                 gcgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGcc                         >  2:662751/1‑94 (MQ=255)

                                                                  cgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca                        >  2:8033724/1‑94 (MQ=255)

                                                                  cgcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca                        >  1:5033425/1‑94 (MQ=255)

                                                                   gcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                       >  1:2601789/1‑94 (MQ=255)

                                                                   gcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                       <  2:5607525/94‑1 (MQ=255)

                                                                    cATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca                      >  2:2367801/1‑94 (MQ=255)

                                                                    cATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca                      <  2:8328242/94‑1 (MQ=255)

                                                                     aTTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGACTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac                     >  2:5821187/1‑94 (MQ=255)

                                                                      tttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc                    <  2:1614637/94‑1 (MQ=255)

                                                                      tttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc                    <  2:6450925/94‑1 (MQ=255)

                                                                       ttGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCg                   >  2:1374233/1‑94 (MQ=255)

                                                                         gTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCa                 <  2:7750347/94‑1 (MQ=255)

                                                                           tATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa               <  2:7029436/94‑1 (MQ=255)

                                                                           tATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTAACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa               <  1:5694532/94‑1 (MQ=255)

                                                                            atcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc              <  2:508048/94‑1 (MQ=255)

                                                                            atcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc              <  1:3081785/94‑1 (MQ=255)

                                                                            atcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCACCCACACCGCAAAc              >  2:9247157/1‑94 (MQ=255)

                                                                            atcatcatcCCTGAATT‑CAGAAATAAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc              <  1:7836693/94‑1 (MQ=255)

                                                                               atcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt           >  2:5365185/1‑94 (MQ=255)

                                                                               atcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt           >  2:2125699/1‑94 (MQ=255)

                                                                                tcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGtt          >  1:8913505/1‑94 (MQ=255)

                                                                                  atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg        >  1:9184931/1‑94 (MQ=255)

                                                                                  atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg        >  2:1062295/1‑94 (MQ=255)

                                                                                    cccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt      >  1:1187598/1‑94 (MQ=255)

                                                                                    cccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt      >  1:3542818/1‑94 (MQ=255)

                                                                                     ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTa     >  1:743965/1‑94 (MQ=255)

                                                                                       tGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCTTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATc   <  1:4037355/94‑1 (MQ=255)

                                                                                        gAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCa  <  2:4073688/94‑1 (MQ=255)

CCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCA  >  NC_000913/2812765‑2812947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC  >  NC_000913/2812766‑2812952

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCA                                                                                               >  SRR4302545.6601156/1‑94 (MQ=60)

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCA                                                                                               >  SRR4302545.4865133/1‑94 (MQ=60)

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCA                                                                                               <  SRR4302545.9868678/94‑1 (MQ=60)

  GTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGA                                                                                            >  SRR4302545.2066651/1‑94 (MQ=60)

   TAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAG                                                                                           <  SRR4302545.4643080/94‑1 (MQ=60)

   TAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAG                                                                                           <  SRR4302545.4643079/94‑1 (MQ=60)

    AATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGA                                                                                          <  SRR4302545.6467735/94‑1 (MQ=60)

    AATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGA                                                                                          >  SRR4302545.10475513/1‑94 (MQ=60)

     ATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAT                                                                                         >  SRR4302545.20635/1‑94 (MQ=60)

     ATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAT                                                                                         >  SRR4302545.7470448/1‑94 (MQ=60)

     ATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAT                                                                                         >  SRR4302545.64319/1‑94 (MQ=60)

      TTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATG                                                                                        >  SRR4302545.5276700/1‑94 (MQ=60)

      TTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATG                                                                                        >  SRR4302545.7793543/1‑94 (MQ=60)

      TTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATG                                                                                        >  SRR4302545.3005624/1‑94 (MQ=60)

        TTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAA                                                                                      <  SRR4302545.8853356/94‑1 (MQ=60)

        TTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAA                                                                                      >  SRR4302545.10931153/1‑94 (MQ=60)

        TTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAA                                                                                      <  SRR4302545.8853355/94‑1 (MQ=60)

        TTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAA                                                                                      >  SRR4302545.3069916/1‑94 (MQ=60)

          TTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAT                                                                                    >  SRR4302545.3112122/1‑94 (MQ=60)

             AAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTT                                                                                 <  SRR4302545.507540/94‑1 (MQ=60)

              AAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGAAGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTG                                                                                >  SRR4302545.840932/1‑94 (MQ=60)

                AATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGC                                                                              >  SRR4302545.9329002/1‑94 (MQ=60)

                 ATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCC                                                                             <  SRR4302545.220782/94‑1 (MQ=60)

                 ATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCC                                                                             >  SRR4302545.7406123/1‑94 (MQ=60)

                 ATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTAAATT‑CAGAGATGAAATTTTGGCC                                                                             >  SRR4302545.5993092/1‑94 (MQ=60)

                  TTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCA                                                                            <  SRR4302545.6583202/94‑1 (MQ=60)

                  TTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCA                                                                            <  SRR4302545.6583199/94‑1 (MQ=60)

                  TTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCA                                                                            <  SRR4302545.8340864/94‑1 (MQ=60)

                  TTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCA                                                                            <  SRR4302545.8340868/94‑1 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           >  SRR4302545.6487605/1‑94 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           <  SRR4302545.2851139/94‑1 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           >  SRR4302545.10429875/1‑94 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           <  SRR4302545.10340691/94‑1 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           >  SRR4302545.10818647/1‑94 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           >  SRR4302545.9868253/1‑94 (MQ=60)

                   TTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCAC                                                                           >  SRR4302545.1394482/1‑94 (MQ=60)

                    TTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACT                                                                          <  SRR4302545.10283002/94‑1 (MQ=60)

                    TTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACT                                                                          <  SRR4302545.4508475/94‑1 (MQ=60)

                     TCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAACTTTTGGCCACTC                                                                         >  SRR4302545.5860942/1‑94 (MQ=60)

                     TCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTC                                                                         >  SRR4302545.10352557/1‑94 (MQ=60)

                     TCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTC                                                                         >  SRR4302545.8813163/1‑94 (MQ=60)

                      CTGATCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCA                                                                        <  SRR4302545.4606403/94‑1 (MQ=60)

                      CTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTAGCCACTCA                                                                        >  SRR4302545.8637918/1‑94 (MQ=60)

                      CTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAAATGAAATTTTGGCCACTCA                                                                        >  SRR4302545.3765930/1‑94 (MQ=60)

                       TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAC                                                                       >  SRR4302545.8647473/1‑94 (MQ=60)

                       TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAC                                                                       <  SRR4302545.10612992/94‑1 (MQ=60)

                       TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAC                                                                       >  SRR4302545.5227641/1‑94 (MQ=60)

                       TGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTCGTCACTCAC                                                                       >  SRR4302545.8530539/1‑94 (MQ=60)

                        GAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACG                                                                      <  SRR4302545.2766591/94‑1 (MQ=60)

                        GAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACG                                                                      >  SRR4302545.1920559/1‑94 (MQ=60)

                        GAACTCATTCTTCCCGGGCGAGTCTGAGTATATGAAAGACGCGAATTTGTTATCATCATCCCTGAATT‑CAGAGATACAATTTTGGCCACTCACG                                                                      <  SRR4302545.9672861/94‑1 (MQ=60)

                         AACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGA                                                                     <  SRR4302545.9830518/94‑1 (MQ=60)

                          ACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAG                                                                    <  SRR4302545.8987014/94‑1 (MQ=60)

                           CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGT                                                                   <  SRR4302545.5581488/94‑1 (MQ=60)

                           CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGT                                                                   >  SRR4302545.6802552/1‑94 (MQ=60)

                           CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGT                                                                   <  SRR4302545.8689275/94‑1 (MQ=60)

                           CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGT                                                                   <  SRR4302545.10720136/94‑1 (MQ=60)

                           CTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGG                                                                   >  SRR4302545.7911553/1‑94 (MQ=60)

                            TCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTG                                                                  <  SRR4302545.7485306/94‑1 (MQ=60)

                            TCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTG                                                                  >  SRR4302545.7859340/1‑94 (MQ=60)

                                TCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCT                                                              <  SRR4302545.8763641/94‑1 (MQ=60)

                                TCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCT                                                              >  SRR4302545.10838129/1‑94 (MQ=60)

                                TCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCACTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCT                                                              >  SRR4302545.10569706/1‑94 (MQ=60)

                                 CTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTT                                                             <  SRR4302545.10293635/94‑1 (MQ=60)

                                  TTCCCAGTCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTT                                                            >  SRR4302545.8882606/1‑94 (MQ=60)

                                  TTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTT                                                            >  SRR4302545.3275258/1‑94 (MQ=60)

                                  TTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTT                                                            >  SRR4302545.4555938/1‑94 (MQ=60)

                                   TCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTT                                                           >  SRR4302545.3351110/1‑94 (MQ=60)

                                   TCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTT                                                           <  SRR4302545.4966762/94‑1 (MQ=60)

                                    CCCAGGCGAGTCTGAGTATCTGGAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCTCGGGGGGCCTTTTT                                                          >  SRR4302545.8125687/1‑94 (MQ=60)

                                    CCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCTTCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTT                                                          >  SRR4302545.8125688/1‑94 (MQ=60)

                                    CCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTT                                                          <  SRR4302545.2257490/94‑1 (MQ=60)

                                    CCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCAACCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTT                                                          <  SRR4302545.9405151/94‑1 (MQ=60)

                                     CCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTC                                                         >  SRR4302545.3246666/1‑94 (MQ=60)

                                     CCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTC                                                         <  SRR4302545.3123935/94‑1 (MQ=60)

                                     CCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTC                                                         <  SRR4302545.3123934/94‑1 (MQ=60)

                                      CAGGCGAGTCTGAGTATATGAAAGACGCGTATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCT                                                        <  SRR4302545.3775099/94‑1 (MQ=60)

                                      CAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCT                                                        >  SRR4302545.9704815/1‑94 (MQ=60)

                                       AGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTT                                                       >  SRR4302545.7246533/1‑94 (MQ=60)

                                        GGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTT                                                      >  SRR4302545.90910/1‑94 (MQ=60)

                                        GGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTT                                                      >  SRR4302545.7759765/1‑94 (MQ=60)

                                         GCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTT                                                     <  SRR4302545.8731936/94‑1 (MQ=60)

                                          CGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGACTCTCACGAGTGGCCTTTTTCTTTTC                                                    <  SRR4302545.1851449/94‑1 (MQ=60)

                                           GAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCT                                                   <  SRR4302545.479493/94‑1 (MQ=60)

                                           GAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCT                                                   >  SRR4302545.5581037/1‑94 (MQ=60)

                                            AGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTAACGAGTGGCCTTTTTCTTTTCTG                                                  <  SRR4302545.6903528/94‑1 (MQ=60)

                                             GTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGT                                                 <  SRR4302545.9871917/94‑1 (MQ=60)

                                             GTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGT                                                 >  SRR4302545.7641786/1‑94 (MQ=60)

                                             GTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGT                                                 >  SRR4302545.5857427/1‑94 (MQ=60)

                                              TCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTC                                                <  SRR4302545.7621631/94‑1 (MQ=60)

                                               CTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCA                                               >  SRR4302545.1228795/1‑94 (MQ=60)

                                               CTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCA                                               >  SRR4302545.2200873/1‑94 (MQ=60)

                                               CTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCA                                               >  SRR4302545.3762095/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGGATT‑CAGAGATGACATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAG                                              >  SRR4302545.1882614/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCGG                                              >  SRR4302545.3182714/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAG                                              >  SRR4302545.3182710/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAG                                              >  SRR4302545.6861432/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAG                                              >  SRR4302545.3182712/1‑94 (MQ=60)

                                                TGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAG                                              <  SRR4302545.46713/94‑1 (MQ=60)

                                                 GAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAGTTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGG                                             >  SRR4302545.10137766/1‑94 (MQ=60)

                                                  AGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGC                                            >  SRR4302545.6814567/1‑94 (MQ=60)

                                                   GTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTTGCCACTCACGAGAGGCCTTTTTCTTTTCTGTCAGTCG                                           >  SRR4302545.5519759/1‑94 (MQ=60)

                                                   GTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCG                                           >  SRR4302545.8193702/1‑94 (MQ=60)

                                                   GTATATGAAAGACGCGCATTTGTTATCATCATCACTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCG                                           >  SRR4302545.4417176/1‑94 (MQ=60)

                                                    TATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGT                                          >  SRR4302545.7464574/1‑94 (MQ=60)

                                                    TATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGT                                          <  SRR4302545.6068537/94‑1 (MQ=60)

                                                     ATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTG                                         >  SRR4302545.5624972/1‑94 (MQ=60)

                                                      TATGAAAGTCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCGTTTTTCTTTTCTGTCAGGCGGGT                                        >  SRR4302545.7034034/1‑94 (MQ=60)

                                                      TATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGT                                        >  SRR4302545.3797473/1‑94 (MQ=60)

                                                      TATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGT                                        >  SRR4302545.1262992/1‑94 (MQ=60)

                                                       ATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTT                                       <  SRR4302545.7447478/94‑1 (MQ=60)

                                                        TGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTT                                      >  SRR4302545.2314838/1‑94 (MQ=60)

                                                        TGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTT                                      >  SRR4302545.8463863/1‑94 (MQ=60)

                                                        TGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTT                                      >  SRR4302545.9464014/1‑94 (MQ=60)

                                                        TGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTT                                      >  SRR4302545.525976/1‑94 (MQ=60)

                                                          AAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT                                    >  SRR4302545.8249015/1‑94 (MQ=60)

                                                          AAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT                                    <  SRR4302545.2422002/94‑1 (MQ=60)

                                                          AAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT                                    >  SRR4302545.3702220/1‑94 (MQ=60)

                                                           AAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTC                                   <  SRR4302545.8307452/94‑1 (MQ=60)

                                                           AAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTC                                   <  SRR4302545.3420236/94‑1 (MQ=60)

                                                              ACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAG                                <  SRR4302545.2805214/94‑1 (MQ=60)

                                                               CGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGC                               <  SRR4302545.4646882/94‑1 (MQ=60)

                                                               CGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGC                               <  SRR4302545.7534876/94‑1 (MQ=60)

                                                               CGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGC                               >  SRR4302545.4748957/1‑94 (MQ=60)

                                                                gatCATTTCTTATCATCATCCCTTAATT‑CATATATGAAATTGTGGCCACTCACGAGTGGCCTTTTTTTTTTCTGTCAGGCGTGTTTTTCCAGCC                              <  SRR4302545.7849451/91‑1 (MQ=60)

                                                                GCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCC                              >  SRR4302545.10192454/1‑94 (MQ=60)

                                                                GCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCC                              >  SRR4302545.7398569/1‑94 (MQ=60)

                                                                 CGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCA                             >  SRR4302545.2424005/1‑94 (MQ=60)

                                                                 CGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCA                             >  SRR4302545.5160751/1‑94 (MQ=60)

                                                                 CGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCA                             >  SRR4302545.5161067/1‑94 (MQ=60)

                                                                  gatctctgatctATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCAC                            <  SRR4302545.9400216/82‑1 (MQ=60)

                                                                  GCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCAC                            >  SRR4302545.2664416/1‑94 (MQ=60)

                                                                   CATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACA                           >  SRR4302545.8455734/1‑94 (MQ=60)

                                                                   CATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTACAGCCACA                           >  SRR4302545.768603/1‑94 (MQ=60)

                                                                    ATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGaattcagggatgatgataacaaat                          <  SRR4302545.5963280/94‑25 (MQ=60)

                                                                    ATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGaattcagggatgatgataacaaat                          <  SRR4302545.5963279/94‑25 (MQ=60)

                                                                     TTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACC                         >  SRR4302545.10686240/1‑94 (MQ=60)

                                                                      TTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCG                        <  SRR4302545.10351449/94‑1 (MQ=60)

                                                                       TGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGC                       <  SRR4302545.10737723/94‑1 (MQ=60)

                                                                       TGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTACAGCCACACCGC                       >  SRR4302545.226705/1‑94 (MQ=60)

                                                                         TTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAA                     <  SRR4302545.4422330/94‑1 (MQ=60)

                                                                          TATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTAACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAA                    <  SRR4302545.5846967/94‑1 (MQ=60)

                                                                           ATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAC                   <  SRR4302545.3157545/94‑1 (MQ=60)

                                                                           ATCATCATCCCTGAATT‑CAGAAATAAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAC                   <  SRR4302545.8058816/94‑1 (MQ=60)

                                                                            TCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACG                  >  SRR4302545.2998017/1‑94 (MQ=60)

                                                                            TCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACG                  >  SRR4302545.2197398/1‑94 (MQ=60)

                                                                              ATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGT                >  SRR4302545.2443962/1‑94 (MQ=60)

                                                                              ATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGT                >  SRR4302545.7563877/1‑94 (MQ=60)

                                                                               TCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTT               >  SRR4302545.9172654/1‑94 (MQ=60)

                                                                               TCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTT               >  SRR4302545.9172655/1‑94 (MQ=60)

                                                                               TCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTT               >  SRR4302545.9172656/1‑94 (MQ=60)

                                                                               TCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGGT               >  SRR4302545.5964417/1‑94 (MQ=60)

                                                                                CATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTC              <  SRR4302545.520954/94‑1 (MQ=60)

                                                                                CATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTAGTTTTCCAGCCACACCGCAAACGGGTC              >  SRR4302545.9662158/1‑94 (MQ=60)

                                                                                 ATCCCTGACTT‑CAGAGATGAAATTTTGGCCACTCACGAGAGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCAACACCGCAAACGGTTCG             >  SRR4302545.4675817/1‑94 (MQ=60)

                                                                                 ATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCG             >  SRR4302545.9454268/1‑94 (MQ=60)

                                                                                  TCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGG            <  SRR4302545.8708892/94‑1 (MQ=60)

                                                                                  TCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGG            <  SRR4302545.7081669/94‑1 (MQ=60)

                                                                                   CCTTGAATT‑CAGAGATGAAATTTGGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGT           <  SRR4302545.1528503/94‑1 (MQ=60)

                                                                                   CCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGT           >  SRR4302545.3629529/1‑94 (MQ=60)

                                                                                   CCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGT           >  SRR4302545.1214046/1‑94 (MQ=60)

                                                                                    CCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTA          >  SRR4302545.760681/1‑94 (MQ=60)

                                                                                    CCTG‑ATTGCAGAGATGAAATTTTGCCCACTCACGATTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTCCCAGCCACACCGCAAACGGTTCGGTA          <  SRR4302545.3975346/94‑1 (MQ=60)

                                                                                     CTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAT         >  SRR4302545.10194890/1‑94 (MQ=60)

                                                                                      TGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCTTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC        <  SRR4302545.4138439/94‑1 (MQ=60)

                                                                                      TGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC        >  SRR4302545.1284938/1‑94 (MQ=60)

                                                                                      TGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC        >  SRR4302545.8703127/1‑94 (MQ=60)

                                                                                      TGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC        <  SRR4302545.551943/94‑1 (MQ=60)

                                                                                      TGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGGTCGGTATC        >  SRR4302545.952555/1‑94 (MQ=60)

                                                                                        AATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTTGGTATCAG      >  SRR4302545.9845705/1‑94 (MQ=60)

                                                                                        AATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGGTCGGTATCAG      >  SRR4302545.6250180/1‑94 (MQ=60)

                                                                                             CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC  >  SRR4302545.4849913/1‑94 (MQ=60)

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGCGGC  >  NC_000913/2812766‑2812952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`