Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,939,218 G→A C16C (TGC→TGT)  ygdE ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,939,2180GA98.9% 1358.7 / ‑0.6 369C16C (TGC→TGT) ygdEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (2/2);  new base A (175/190);  total (177/192)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01

Only 100 of 393 total aligned reads displayed.

AACATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCGCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAACAT  >  NC_000913/2939127‑2939308
                                                                                           |                                                                                          
aaCATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGcaca                                                                                          <  2:143983/94‑1 (MQ=255)
aaCATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGcaca                                                                                          >  1:2601003/1‑94 (MQ=255)
 aCATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATTGGTTATTTCTGCGGCacac                                                                                         >  1:9387914/1‑94 (MQ=255)
 aCATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCacac                                                                                         <  2:5815974/94‑1 (MQ=255)
  cATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACAct                                                                                        <  1:1574897/94‑1 (MQ=255)
   aTTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACActc                                                                                       <  1:7671688/94‑1 (MQ=255)
      cATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCttt                                                                                    <  1:5611617/94‑1 (MQ=255)
       aTAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCtttt                                                                                   >  2:6354437/1‑94 (MQ=255)
        tAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCttttt                                                                                  <  2:2887890/94‑1 (MQ=255)
        tAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCttttt                                                                                  >  2:4212939/1‑94 (MQ=255)
          aaTGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCa                                                                                <  1:6982547/94‑1 (MQ=255)
            tGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCaaa                                                                              <  2:3183613/94‑1 (MQ=255)
              aCATACCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGc                                                                            <  2:9891642/94‑1 (MQ=255)
              aCATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGc                                                                            <  1:6446643/94‑1 (MQ=255)
               cATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGcc                                                                           <  2:2265588/94‑1 (MQ=255)
               cATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGcc                                                                           >  1:4645922/1‑94 (MQ=255)
                 tAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCg                                                                         <  2:25349/94‑1 (MQ=255)
                  aaCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGTCCgg                                                                        >  1:3471365/1‑94 (MQ=255)
                  aaCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCgg                                                                        >  2:4702638/1‑94 (MQ=255)
                  aaCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCgg                                                                        >  1:8326186/1‑94 (MQ=255)
                  aaCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCgg                                                                        <  2:9082629/94‑1 (MQ=255)
                   aCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCGCACTCTTTTTCAAAGCCCGGa                                                                       >  1:10008590/1‑94 (MQ=255)
                   aCCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCAGCTGGCCGGCTTTATCGGTAATTTCTGCGCAACACTCTTTTTCAAAGCCCggc                                                                       >  2:1932440/1‑93 (MQ=255)
                    ccccCATTCTCTTTCACGCGGGCAAACCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGAc                                                                      <  1:8682768/94‑1 (MQ=255)
                     ccGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACg                                                                     >  1:4338693/1‑94 (MQ=255)
                     ccGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACg                                                                     >  1:3932380/1‑94 (MQ=255)
                     ccGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACg                                                                     <  2:2209192/94‑1 (MQ=255)
                       gCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGc                                                                   >  1:6164800/1‑94 (MQ=255)
                         aTTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGcac                                                                 <  2:1992419/94‑1 (MQ=255)
                         aTTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGcac                                                                 >  2:77637/1‑94 (MQ=255)
                         aTTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGcac                                                                 >  2:8582844/1‑94 (MQ=255)
                          tgctctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGcaca                                                                <  2:6932332/92‑1 (MQ=255)
                           tctcTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAg                                                               <  1:9762499/94‑1 (MQ=255)
                           tctcTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAg                                                               <  2:9644183/94‑1 (MQ=255)
                            gtctTTCAGGCGGGCAAAACCGAAAATTTTCCGCTGGCCGGCTTTATGGGAAATTTCGGCGGGAAACTATTTTTCCAAGCCCGGTCGGaacacc                                                              >  2:6037664/2‑92 (MQ=255)
                             tctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCa                                                             >  2:6095053/1‑94 (MQ=255)
                             tctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCa                                                             >  2:10468909/1‑94 (MQ=255)
                             tctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCa                                                             <  2:7633908/94‑1 (MQ=255)
                             tctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCa                                                             <  1:4232518/94‑1 (MQ=255)
                             tctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCa                                                             <  1:1509020/94‑1 (MQ=255)
                              ctTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCACAGCCCGGACGGCACAGCaa                                                            >  1:9871716/1‑94 (MQ=255)
                               tttCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAAt                                                           <  2:9317660/94‑1 (MQ=255)
                                ttCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATa                                                          >  2:378719/1‑94 (MQ=255)
                                  cACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACa                                                        >  2:8517733/1‑94 (MQ=255)
                                  cACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACa                                                        <  1:3194989/94‑1 (MQ=255)
                                   aCGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACaa                                                       >  1:603235/1‑94 (MQ=255)
                                    cgcgGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAAc                                                      <  2:921940/94‑1 (MQ=255)
                                      cgGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACACCCt                                                    >  2:6797671/1‑94 (MQ=255)
                                           aaaaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTc                                               >  2:8893060/1‑94 (MQ=255)
                                           aaaaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTc                                               <  2:2819533/94‑1 (MQ=255)
                                           aaaaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTc                                               <  2:8433625/94‑1 (MQ=255)
                                            aaaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCa                                              <  2:301008/94‑1 (MQ=255)
                                            aaaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCa                                              <  2:7308719/94‑1 (MQ=255)
                                             aaCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCAt                                             <  1:9204974/94‑1 (MQ=255)
                                              aCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATg                                            <  2:1103163/94‑1 (MQ=255)
                                              aCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATg                                            <  1:550238/94‑1 (MQ=255)
                                              aCCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATg                                            <  1:1842489/94‑1 (MQ=255)
                                               ccGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGa                                           >  2:3523740/1‑94 (MQ=255)
                                                cGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGAc                                          <  2:5679885/94‑1 (MQ=255)
                                                 gAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACt                                         >  2:4415223/1‑94 (MQ=255)
                                                  aaaaTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACtt                                        <  1:4829507/94‑1 (MQ=255)
                                                  aaaaTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACtt                                        <  1:9021508/94‑1 (MQ=255)
                                                   aaaTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTa                                       >  1:8811278/1‑94 (MQ=255)
                                                    aaTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTAc                                      <  1:7824498/94‑1 (MQ=255)
                                                    aaTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTAc                                      <  1:5152859/94‑1 (MQ=255)
                                                     aTTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACg                                     >  2:2134034/1‑94 (MQ=255)
                                                      tttCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGc                                    <  1:5281364/94‑1 (MQ=255)
                                                       ttCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGcc                                   <  2:1614770/94‑1 (MQ=255)
                                                       ttCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGcc                                   >  2:810018/1‑94 (MQ=255)
                                                       ttCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGcc                                   <  2:6429467/94‑1 (MQ=255)
                                                        tCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGccc                                  <  1:7133410/94‑1 (MQ=255)
                                                        tCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGccc                                  >  1:8532457/1‑94 (MQ=255)
                                                         cccGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCt                                 <  2:7547844/94‑1 (MQ=255)
                                                           cGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTg                               <  2:4892814/94‑1 (MQ=255)
                                                           cGCTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTg                               <  2:8185173/94‑1 (MQ=255)
                                                             cTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTgcg                             <  1:3377698/94‑1 (MQ=255)
                                                             cTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTgcg                             <  1:292063/94‑1 (MQ=255)
                                                             cTGGCCGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTgcg                             >  2:6650032/1‑94 (MQ=255)
                                                              tGGCCGGCTTTATCGGTAATTTCTGCGACACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTgcgc                            <  2:8996242/94‑1 (MQ=255)
                                                                 ccGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCttt                         <  1:197060/94‑1 (MQ=255)
                                                                 ccGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCttt                         <  1:3710356/94‑1 (MQ=255)
                                                                  cGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTa                        >  1:5746416/1‑94 (MQ=255)
                                                                  cGGCTTTATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTa                        <  1:9544052/94‑1 (MQ=255)
                                                                      tttATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACg                    <  2:1282261/94‑1 (MQ=255)
                                                                       ttATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACgg                   >  1:6632358/1‑94 (MQ=255)
                                                                       ttATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACgg                   <  1:10595847/94‑1 (MQ=255)
                                                                        tATCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGa                  <  1:2220889/94‑1 (MQ=255)
                                                                         aTCGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGAt                 >  1:2553755/1‑94 (MQ=255)
                                                                           cGGTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAg               <  1:2787682/94‑1 (MQ=255)
                                                                            ggTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGGCTTACGCCCTTGCGCTTTAAACGGATAGc              <  1:7966362/94‑1 (MQ=255)
                                                                            ggTAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGc              <  2:9032041/94‑1 (MQ=255)
                                                                              tAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCAc            <  1:10321891/94‑1 (MQ=255)
                                                                              tAATTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCAc            >  1:4920588/1‑94 (MQ=255)
                                                                               aaTTTCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCAcc           >  2:10028585/1‑94 (MQ=255)
                                                                                 tttCTGCGGCACACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCac         >  2:518867/1‑93 (MQ=255)
                                                                                      gcggcaCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAAc    >  1:10495978/1‑94 (MQ=255)
                                                                                      gcggcaCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAAc    <  2:6723925/94‑1 (MQ=255)
                                                                                       cggcaCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAACa   <  1:7462961/94‑1 (MQ=255)
                                                                                       cggcaCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAACa   >  2:5973566/1‑94 (MQ=255)
                                                                                       cggcaCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAACa   >  1:1024979/1‑94 (MQ=255)
                                                                                           |                                                                                          
AACATTCATAAATGACATAACCCGCATTCTCTTTCACGCGGGCAAAACCGAAAATTTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCGCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAACTAACAT  >  NC_000913/2939127‑2939308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGA  >  NC_000913/2941624‑2941810
                                                                                             |                                                                                             
GCACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCG                                                                                               <  SRR4302545.9772511/94‑1 (MQ=60)
 CACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGC                                                                                              <  SRR4302545.1001902/94‑1 (MQ=60)
 CACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGC                                                                                              >  SRR4302545.300220/1‑94 (MQ=60)
 CACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGC                                                                                              >  SRR4302545.3742064/1‑94 (MQ=60)
 CACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGC                                                                                              >  SRR4302545.2431616/1‑94 (MQ=60)
 CACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGC                                                                                              >  SRR4302545.935122/1‑94 (MQ=60)
  cccgctaaatccagctacaaGGTGGCAGAATGCTAGGCGCGGCTGCGACTGCAGCCGGGCGATGAGATTATTGTGAGCGTGGCATAACACCGCG                                                                                             <  SRR4302545.2842592/74‑1 (MQ=21)
  ACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACG                                                                                             <  SRR4302545.9386964/94‑1 (MQ=60)
    CACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCC                                                                                           <  SRR4302545.2995361/94‑1 (MQ=60)
     ACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCA                                                                                          >  SRR4302545.8510279/1‑94 (MQ=60)
     ACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCA                                                                                          >  SRR4302545.229162/1‑94 (MQ=60)
      CTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCCA                                                                                         >  SRR4302545.1686295/1‑94 (MQ=60)
      CTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAA                                                                                         >  SRR4302545.4831767/1‑94 (MQ=60)
       TGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAAC                                                                                        >  SRR4302545.6386319/1‑94 (MQ=60)
       TGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAAC                                                                                        >  SRR4302545.4013865/1‑94 (MQ=60)
       TGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAAC                                                                                        <  SRR4302545.4781505/94‑1 (MQ=60)
       TGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAAC                                                                                        <  SRR4302545.790877/94‑1 (MQ=60)
       GGAATCCATCAACATGGTGGCACAAAGCTATGCGTGCCCGCGTCTGCAACCGGGCGATGAGATTATGGTCAGCGAGGCAGAACACCGCGCCAAC                                                                                        >  SRR4302545.8315211/1‑94 (MQ=60)
        GAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACC                                                                                       <  SRR4302545.9005839/94‑1 (MQ=60)
        GAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACC                                                                                       <  SRR4302545.6809640/94‑1 (MQ=60)
         AATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCT                                                                                      <  SRR4302545.9552011/94‑1 (MQ=60)
         AATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCT                                                                                      <  SRR4302545.10746577/94‑1 (MQ=60)
          ATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTC                                                                                     <  SRR4302545.9092697/94‑1 (MQ=60)
          ATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTC                                                                                     <  SRR4302545.5887108/94‑1 (MQ=60)
           TCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCG                                                                                    >  SRR4302545.9749301/1‑94 (MQ=60)
           TCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCG                                                                                    <  SRR4302545.1574268/94‑1 (MQ=60)
           TCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCG                                                                                    <  SRR4302545.5228740/94‑1 (MQ=60)
             CATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTC                                                                                  <  SRR4302545.8176418/94‑1 (MQ=60)
             CATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTC                                                                                  <  SRR4302545.8176419/94‑1 (MQ=60)
             CATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTC                                                                                  <  SRR4302545.4984121/94‑1 (MQ=60)
              agcacaatagtggaaaaatgtTATGCGCTTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGGCC                                                                                 <  SRR4302545.2240211/73‑1 (MQ=60)
              ATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCC                                                                                 >  SRR4302545.8601129/1‑94 (MQ=60)
                caatatggcgccaaattgttgtgctcgtctGCGTCTGCAACCGGGCGATGAGATAATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGACCCC                                                                               <  SRR4302545.9575932/64‑1 (MQ=60)
                CAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCC                                                                               >  SRR4302545.2448817/1‑94 (MQ=60)
                CAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCC                                                                               >  SRR4302545.9621843/1‑94 (MQ=60)
                 AACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCT                                                                              >  SRR4302545.68760/1‑94 (MQ=60)
                  ACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACCCCGCGCCAACCTCGTCCCCTG                                                                             <  SRR4302545.7142383/94‑1 (MQ=60)
                  ACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTG                                                                             <  SRR4302545.7010694/94‑1 (MQ=60)
                  ACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTG                                                                             <  SRR4302545.7267632/94‑1 (MQ=60)
                  ACATGGGGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGCCAGAACACCCCGCCACCCTCGCCCCCTG                                                                             >  SRR4302545.2893018/1‑94 (MQ=60)
                   CATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGG                                                                            >  SRR4302545.3973552/1‑94 (MQ=60)
                   CATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGG                                                                            >  SRR4302545.6973932/1‑94 (MQ=60)
                   CATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGG                                                                            >  SRR4302545.2010994/1‑94 (MQ=60)
                   CATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGG                                                                            >  SRR4302545.10191556/1‑94 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           >  SRR4302545.4312397/1‑94 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           <  SRR4302545.1715021/94‑1 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           >  SRR4302545.4833914/1‑94 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           >  SRR4302545.7043169/1‑94 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           >  SRR4302545.7179252/1‑94 (MQ=60)
                    ATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGC                                                                           >  SRR4302545.10684493/1‑94 (MQ=60)
                     TGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGCGGCAGAACCCCGCGCCAACCTCGTCCCCTGGCT                                                                          <  SRR4302545.5062288/94‑1 (MQ=60)
                      GGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTG                                                                         <  SRR4302545.45804/94‑1 (MQ=60)
                       GTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGA                                                                        <  SRR4302545.9526588/94‑1 (MQ=60)
                       GTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGA                                                                        >  SRR4302545.6448532/1‑94 (MQ=60)
                        TGGCACAATGCTATGCGTGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGAT                                                                       <  SRR4302545.9886542/94‑1 (MQ=60)
                        TGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGAT                                                                       <  SRR4302545.10150410/94‑1 (MQ=60)
                         GGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATG                                                                      <  SRR4302545.1773228/94‑1 (MQ=60)
                         GGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATG                                                                      <  SRR4302545.1942620/94‑1 (MQ=60)
                         GGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATG                                                                      <  SRR4302545.1158570/94‑1 (MQ=60)
                         GGCACAATGCTAGGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACGCCAACCTCGTCCCCTGGCTGATG                                                                      <  SRR4302545.1158568/94‑1 (MQ=60)
                          GCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGG                                                                     <  SRR4302545.6590608/94‑1 (MQ=60)
                          GCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGG                                                                     <  SRR4302545.6590609/94‑1 (MQ=60)
                           cacaatgcgaggctccgCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGT                                                                    <  SRR4302545.9331512/77‑1 (MQ=60)
                           CACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGT                                                                    <  SRR4302545.5085236/94‑1 (MQ=60)
                           CACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATCAGATTATTGTCAGCGTGGCAGAACACAGCGCCAACCTCGTCCCCTGGATGATGGT                                                                    >  SRR4302545.6206028/1‑94 (MQ=60)
                            AGAATGCTATGCGCGGCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTC                                                                   <  SRR4302545.8246339/94‑1 (MQ=60)
                             CAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCG                                                                  >  SRR4302545.9768543/1‑94 (MQ=60)
                             CAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCG                                                                  <  SRR4302545.10148856/94‑1 (MQ=60)
                              AATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGC                                                                 >  SRR4302545.8501032/1‑94 (MQ=60)
                                TGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACAACGCGCCAACCTCGTACCCTGGCTGATGGTCGCCC                                                               >  SRR4302545.3340595/1‑94 (MQ=60)
                                 GCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTTTTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATTGTCGCCCA                                                              >  SRR4302545.9648045/1‑94 (MQ=60)
                                 GCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCA                                                              >  SRR4302545.11347/1‑94 (MQ=60)
                                  CTATGCGGGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAA                                                             >  SRR4302545.10581488/1‑94 (MQ=60)
                                  CTATGCGCGTCCGCGTCTGCATCCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAA                                                             <  SRR4302545.6477195/94‑1 (MQ=60)
                                  CTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAA                                                             >  SRR4302545.2986619/1‑94 (MQ=60)
                                    ATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACA                                                           >  SRR4302545.956101/1‑94 (MQ=60)
                                     TGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAA                                                          <  SRR4302545.4053468/94‑1 (MQ=60)
                                       CGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAAC                                                        >  SRR4302545.3234757/1‑94 (MQ=60)
                                        GCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATAGTCGCCCAACACACT                                                       >  SRR4302545.7490246/1‑94 (MQ=60)
                                        GCGGCCGCGTCGGCAAGCGGGCGATGAGAGTAATGTCAGCGTGGCAGAACACCGCGGCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACT                                                       <  SRR4302545.7804171/94‑1 (MQ=60)
                                         CGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTG                                                      <  SRR4302545.8605205/94‑1 (MQ=60)
                                         CGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTG                                                      <  SRR4302545.2278548/94‑1 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     <  SRR4302545.1125619/94‑1 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     >  SRR4302545.5926719/1‑94 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     <  SRR4302545.4233196/94‑1 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     >  SRR4302545.3764481/1‑94 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     <  SRR4302545.10529309/94‑1 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCAAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGG                                                     <  SRR4302545.10399761/94‑1 (MQ=60)
                                          GTCCGCGTCTGCAACCGGGCGATGAGATTATTGTAAGCGTGGCAGAACACCGCGCCGACCTAGTCCCCTGGCTGATGGTGGCCCAACAAACTGG                                                     >  SRR4302545.3919710/1‑94 (MQ=60)
                                           TCCGCGTCTGCAACCGGGCTATGATATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGA                                                    <  SRR4302545.9741051/94‑1 (MQ=60)
                                            CCGCGTCTGCAGCCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAG                                                   <  SRR4302545.3850134/94‑1 (MQ=60)
                                            CCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAG                                                   >  SRR4302545.7579777/1‑94 (MQ=60)
                                            CCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGCCGCCCAACAAACTGGAG                                                   >  SRR4302545.8999650/1‑94 (MQ=60)
                                             CGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGC                                                  >  SRR4302545.10374812/1‑94 (MQ=60)
                                             CGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGC                                                  <  SRR4302545.3223858/94‑1 (MQ=60)
                                              GCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCC                                                 <  SRR4302545.1978430/94‑1 (MQ=60)
                                               CGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCA                                                <  SRR4302545.6846555/94‑1 (MQ=60)
                                               CGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCA                                                >  SRR4302545.6681755/1‑94 (MQ=60)
                                               CGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCA                                                >  SRR4302545.8273337/1‑94 (MQ=60)
                                                GTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAA                                               <  SRR4302545.9494577/94‑1 (MQ=60)
                                                 TCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAA                                              >  SRR4302545.6716301/1‑94 (MQ=60)
                                                 TCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAA                                              <  SRR4302545.9701151/94‑1 (MQ=60)
                                                  CTGCAACCGTGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAG                                             <  SRR4302545.5416847/94‑1 (MQ=60)
                                                  CTGCAACCGGGCGATGAGATTATTGTCAGCGTGGTAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAG                                             <  SRR4302545.9038335/94‑1 (MQ=60)
                                                  CTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAG                                             <  SRR4302545.4988595/94‑1 (MQ=60)
                                                  CTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAG                                             >  SRR4302545.3744417/1‑94 (MQ=60)
                                                   cgcgACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCCCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGT                                            <  SRR4302545.4657992/90‑1 (MQ=60)
                                                   TGCAAGCGGGCGGTGAGATTATTGGCAGCGTGGCAGAACCCCGGGCCAACCTCGTTCCCTGGCTGATGGTCGCCCAATAAACTGGAGCCAAAGT                                            <  SRR4302545.2587833/94‑1 (MQ=60)
                                                   TGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGT                                            >  SRR4302545.1121435/1‑94 (MQ=60)
                                                    GCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTG                                           <  SRR4302545.8840820/94‑1 (MQ=60)
                                                    GCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTG                                           <  SRR4302545.1520476/94‑1 (MQ=60)
                                                    GCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTG                                           <  SRR4302545.9824783/94‑1 (MQ=60)
                                                    GCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTG                                           <  SRR4302545.9824784/94‑1 (MQ=60)
                                                     CAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGG                                          >  SRR4302545.5824846/1‑94 (MQ=60)
                                                     CAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGG                                          >  SRR4302545.6216660/1‑94 (MQ=60)
                                                     CAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAAACTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGG                                          >  SRR4302545.10013429/1‑94 (MQ=60)
                                                      AACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGG                                         >  SRR4302545.7700924/1‑94 (MQ=60)
                                                       ACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTG                                        <  SRR4302545.4380135/94‑1 (MQ=60)
                                                       ACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTG                                        <  SRR4302545.4380136/94‑1 (MQ=60)
                                                        CCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGA                                       >  SRR4302545.10606684/1‑94 (MQ=60)
                                                        CCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGA                                       >  SRR4302545.10606681/1‑94 (MQ=60)
                                                        CCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGA                                       <  SRR4302545.5390181/94‑1 (MQ=60)
                                                        CCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGA                                       <  SRR4302545.10316003/94‑1 (MQ=60)
                                                         CGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAA                                      <  SRR4302545.7477010/94‑1 (MQ=60)
                                                         CGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAA                                      >  SRR4302545.204846/1‑94 (MQ=60)
                                                          GGGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAA                                     <  SRR4302545.9063781/94‑1 (MQ=60)
                                                           GGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAAT                                    <  SRR4302545.6277916/94‑1 (MQ=60)
                                                           GGCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAAT                                    >  SRR4302545.7024701/1‑94 (MQ=60)
                                                            GCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATT                                   <  SRR4302545.6510045/94‑1 (MQ=60)
                                                            GCGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATT                                   <  SRR4302545.4076299/94‑1 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  >  SRR4302545.10724326/1‑94 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  >  SRR4302545.4322869/1‑94 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  <  SRR4302545.5933753/94‑1 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  <  SRR4302545.5933754/94‑1 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  >  SRR4302545.10508268/1‑94 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTG                                  >  SRR4302545.3556668/1‑94 (MQ=60)
                                                             CGATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGGGAAATTC                                  >  SRR4302545.1499902/1‑94 (MQ=60)
                                                               ATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCC                                <  SRR4302545.8464908/94‑1 (MQ=60)
                                                               ATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCC                                <  SRR4302545.4176401/94‑1 (MQ=60)
                                                               ATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCC                                >  SRR4302545.9270103/1‑94 (MQ=60)
                                                               ATGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCC                                >  SRR4302545.2694167/1‑94 (MQ=60)
                                                                TGAGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCG                               >  SRR4302545.2026211/1‑94 (MQ=60)
                                                                  AGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCT                             <  SRR4302545.470203/94‑1 (MQ=60)
                                                                  AGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCT                             >  SRR4302545.2578991/1‑94 (MQ=60)
                                                                  AGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCT                             >  SRR4302545.425723/1‑94 (MQ=60)
                                                                  AGATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGCGGCGCAATGGCCGCT                             >  SRR4302545.9656248/1‑94 (MQ=60)
                                                                   GATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTT                            <  SRR4302545.2581006/94‑1 (MQ=60)
                                                                   GATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTT                            >  SRR4302545.5887288/1‑94 (MQ=60)
                                                                    ATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTA                           <  SRR4302545.8262486/94‑1 (MQ=60)
                                                                    ATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTA                           <  SRR4302545.1525762/94‑1 (MQ=60)
                                                                    ATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTA                           <  SRR4302545.10830098/94‑1 (MQ=60)
                                                                    ATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTA                           <  SRR4302545.7866253/94‑1 (MQ=60)
                                                                    ATTATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTA                           >  SRR4302545.4463203/1‑94 (MQ=60)
                                                                     ttcgTGTCAGCGTGGCAGAACACCTCACCAGCCTCGCCCCCTGGCTGATGGTCGCCCAACAAACAGCAGCCAAAGTGGTGAGATTGCCGCTGAA                          <  SRR4302545.7433031/90‑1 (MQ=60)
                                                                     TTATTGTCAGCGTGGCAGAACACTGCGACAACCTCGCCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAA                          <  SRR4302545.7433030/94‑1 (MQ=60)
                                                                      TATTGTCAGCGTGGCAGACCACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAAT                         <  SRR4302545.5784087/94‑1 (MQ=60)
                                                                      TATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAAT                         <  SRR4302545.6844219/94‑1 (MQ=60)
                                                                      TATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAAT                         <  SRR4302545.6751908/94‑1 (MQ=60)
                                                                       TTTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATG                        <  SRR4302545.619931/94‑1 (MQ=60)
                                                                       ATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATG                        <  SRR4302545.4032547/94‑1 (MQ=60)
                                                                       ATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATG                        >  SRR4302545.2529032/1‑94 (MQ=60)
                                                                       ATTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATG                        <  SRR4302545.870435/94‑1 (MQ=60)
                                                                        TTGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGC                       <  SRR4302545.3471039/94‑1 (MQ=60)
                                                                         TGTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCG                      <  SRR4302545.1908256/94‑1 (MQ=60)
                                                                         TATCAGCGTGGCAGAACACCGCGCCAGCCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCG                      <  SRR4302545.10235749/94‑1 (MQ=60)
                                                                          GTCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGC                     >  SRR4302545.4625019/1‑94 (MQ=60)
                                                                           TCAGCGTGGCAGAACTCCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCCCA                    <  SRR4302545.9318291/94‑1 (MQ=60)
                                                                           TCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCA                    >  SRR4302545.4499864/1‑94 (MQ=60)
                                                                           TCAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCA                    >  SRR4302545.6604269/1‑94 (MQ=60)
                                                                            CAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAG                   >  SRR4302545.8541493/1‑94 (MQ=60)
                                                                            CAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAG                   >  SRR4302545.8541492/1‑94 (MQ=60)
                                                                            CAGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAG                   <  SRR4302545.1740687/94‑1 (MQ=60)
                                                                             AGCGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGC                  >  SRR4302545.6753750/1‑94 (MQ=60)
                                                                               CGTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGA                >  SRR4302545.7964353/1‑94 (MQ=60)
                                                                                GTGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGAC               <  SRR4302545.4267108/94‑1 (MQ=60)
                                                                                 TGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACT              <  SRR4302545.3059709/94‑1 (MQ=60)
                                                                                 TGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACT              <  SRR4302545.4469251/94‑1 (MQ=60)
                                                                                 TGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACT              <  SRR4302545.8043586/94‑1 (MQ=60)
                                                                                 TGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACT              <  SRR4302545.7703392/94‑1 (MQ=60)
                                                                                 TGGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACT              <  SRR4302545.6940686/94‑1 (MQ=60)
                                                                                  GGCAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTG             <  SRR4302545.4293188/94‑1 (MQ=60)
                                                                                    CAGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCC           >  SRR4302545.10426881/1‑94 (MQ=60)
                                                                                     AGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCG          >  SRR4302545.9507451/1‑94 (MQ=60)
                                                                                     AGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCG          <  SRR4302545.5011925/94‑1 (MQ=60)
                                                                                     AGAACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCG          >  SRR4302545.6526354/1‑94 (MQ=60)
                                                                                       AACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACCAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGA        >  SRR4302545.8119560/1‑94 (MQ=60)
                                                                                       AACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCACAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCTACTGCCGGA        <  SRR4302545.7135474/94‑1 (MQ=60)
                                                                                        ACACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGAT       <  SRR4302545.7861681/94‑1 (MQ=60)
                                                                                         CACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATG      >  SRR4302545.3419868/1‑94 (MQ=60)
                                                                                          ACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGT     >  SRR4302545.6568414/1‑94 (MQ=60)
                                                                                          ACCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGT     >  SRR4302545.4731331/1‑94 (MQ=60)
                                                                                           CCGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTC    >  SRR4302545.1134765/1‑94 (MQ=60)
                                                                                            CGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCG   <  SRR4302545.893981/94‑1 (MQ=60)
                                                                                            CGCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCG   <  SRR4302545.10343187/94‑1 (MQ=60)
                                                                                             GCGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGA  <  SRR4302545.163487/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGA  >  NC_000913/2941624‑2941810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑